Cp4.1LG05g08590 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g08590
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSmall heat-shock protein, putative
LocationCp4.1LG05 : 5587556 .. 5590920 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAAAGTGACCAAAACAACACATCTCTTAACCCTCTTGCATCAAACAACCGCCATGGCCGAAGCACAAAGAAAGCTTCAAACAAAGGAATTACTAATCCCAAAGAAATTCTTATGTGCGATCGCAACTTCAGAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGGTTTCGAATCAAGATCTCCATTCGATATAAAGAATGCCTCGAAGACATCGAAAGAAATAGTCATCAAGAGAAGTTAGAGCAAAGAGAAATTAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTGACATTTTCCCCTTCGAGTTTTGCAAGTTTCAAAATATATTTTCAAAAATATCATTAATTATCTGTTAGTATTATTATTATTAACCATAATCATAAATTTTTTAAATTGAGTTTGTCAATTATTTAATTTTTTTAATAAAATTAAAATATTAATTCATAATATATATATATTAATATTTAATAAAAATTCACTATTTAATTTTAATATATTTTTAAAAAATAACCTTCCAAATTACTATATATTATTTTCAAGCGTTATTAAAAATAAATTAATATTAAATATATATAAATTATATTGTAAACAAATATATATTTTTTAAATTAATAATAAATTTGAATTTGTTGAATTTAACAAATTTTTGGATGTATCAGATTTCCAGAATACCGTTAGATCAAATAGCTTAAAAATAAAATAGAAATTAAATTAATTTATGAAAATTTGAACTTACCATTGAATTTTCGATCTTTTCTGCAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTTGTGATTGTGTATCTCTGCTGTTTTTGTCATTGTGTATCTCAATCTTACAAAGAATGATCATATGGAGGAACAGTGGTGAAGAAGAACAAGAAGCTATGAATCAACATCTAGTTTATGAGTGAACAATGGAACCAAATTCGTTGCCCCGGATTCGGGCACCGACAATAAAATTGCTATAGAGCTGCTACTTCACCTTTACGCTAAGGAAAAGAAAAAGATTAAACCAAAACCTTAAACCTTTTCCTATGTTTTAGGGTCGGTAAAAGAAAAGAGATTCATTCGACTTAACTCCTAAGGGAGAGGAAAGACGAAACATTAATTCGACTAAACCTGATTTCACTCTGACTCAAACTTCAACGACATCTTTTTTAGTGTTACATAAACTACAACTCCTAAAATTGGTCTGAGGCATATGCCCATTGTCAGTTAAAAGTTCAAACGTTCAAATTTCTAGCCTAACATGTCGGTGAGCTAAAAAACACGACTAAATAGTATATTTACGACTACGACTCGAACTTCAACGACATCTTTTTTAGCATTACGTAAACTACGACTCCTCAAACTGGTCAAGGCATATATCCATTGTCAACCNGAAAGAAACAAAAAGAATCTTCGTTTTACCAATGGACAAAGTGACCAAAACAACACATCTCTTAACCCTCTTGCATCAAACAACCGCCATGGCCGAAGCACAAAGAAAGCTTCAAACAAAGGAATTACTAATCCCAAAGAAATTCTTATGTGCGATCGCAACTTCAGAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGGTTTCGAATCAAGATCTCCATTCGATATAAAGAATGCCTCGAAGACATCGAAAGAAATAGTCATCAAGAGAAGTTAGAGCAAAGAGAAATTAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTGACATTTTCCCCTTCGAGTTTTGCAAGTTTCAAAATATATTTTCAAAAATATCATTAATTATCTGTTAGTATTATTATTATTAACCATAATCATAAATTTTTTAAATTGAGTTTGTCAATTATTTAATTTTTTTAATAAAATTAAAATATTAATTCATAATATATATATATTAATATTTAATAAAAATTCACTATTTAATTTTAATATATTTTTAAAAAATAACCTTCCAAATTACTATATATTATTTTCAAGCGTTATTAAAAATAAATTAATATTAAATATATATAAATTATATTGTAAACAAATATATATTTTTTAAATTAATAATAAATTTGAATTTGTTGAATTTAACAAATTTTTGGATGTATCAGATTTCCAGAATACCGTTAGATCAAATAGCTTAAAAATAAAATAGAAATTAAATTAATTTATGAAAATTTGAACTTACCATTGAATTTTCGATCTTTTCTGCAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTT

mRNA sequence

ATGGACAAAAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTTAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTT

Coding sequence (CDS)

ATGGACAAAAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTTAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTT

Protein sequence

MDKRRRISEADFESKDRTNCHGQSTKRKLQAKELLIAKKFLDFQKQNYRKEKSNAMLMDSSSKSYRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTSTSKLRIYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAVSSNNPPAQPPKPTAESQPPPTTSTREGGWVRREEWLRRNMVNLALGAAVLRRRISEADFESKDRTNCHGQSTKRKLQAKELLIAKKFLDFQKQNYRKEKSNAMLMDSSSKSYRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTSTSKLRIYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAVSSNNPPAQPPKPTAESQPPPTTSTREGGWVRREEWLRRNMVNLALGAAVL
Homology
[Close]
BLAST of Cp4.1LG05g08590 vs. Swiss-Prot
Match: RTM2D_ARATH (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.7e-07
Identity = 33/107 (30.84%), Postives = 52/107 (48.60%), Query Frame = 1 

Query: 286 YRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTSTSKLR 345
           Y DF P  +    PE+ +L I L GF +  +KV                   V S+  +R
Sbjct: 16  YEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTY-----------------VHSSKMIR 75

Query: 346 IYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKT 393
           + GER L + KW RF +V  +P++   +KI    +K +L +T P++T
Sbjct: 76  VTGERPLANRKWNRFNEVFTVPQNCLVDKIHGSFKKNVLTITMPKET 105

[Close]
BLAST of Cp4.1LG05g08590 vs. Swiss-Prot
Match: RTM2B_ARATH (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.4e-06
Identity = 32/107 (29.91%), Postives = 51/107 (47.66%), Query Frame = 1 

Query: 286 YRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTSTSKLR 345
           Y DF P  +    PE+ +L I L GF +  +KV                   V S+  +R
Sbjct: 16  YEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTY-----------------VHSSKMIR 75

Query: 346 IYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKT 393
           + GER L + KW RF +V  +P++   +KI    +  +L +T P++T
Sbjct: 76  VTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKET 105

[Close]
BLAST of Cp4.1LG05g08590 vs. Swiss-Prot
Match: RTM2C_ARATH (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.4e-06
Identity = 32/107 (29.91%), Postives = 51/107 (47.66%), Query Frame = 1 

Query: 65  YRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTSTSKLR 124
           Y DF P  +    PE+ +L I L GF +  +KV                   V S+  +R
Sbjct: 16  YEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTY-----------------VHSSKMIR 75

Query: 125 IYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKT 172
           + GER L + KW RF +V  +P++   +KI    +  +L +T P++T
Sbjct: 76  VTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKET 105

[Close]
BLAST of Cp4.1LG05g08590 vs. Swiss-Prot
Match: RTM2_ARATH (Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.4e-06
Identity = 32/107 (29.91%), Postives = 51/107 (47.66%), Query Frame = 1 

Query: 286 YRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTSTSKLR 345
           Y DF P  +    PE+ +L I L GF +  +KV                   V S+  +R
Sbjct: 16  YEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTY-----------------VHSSKMIR 75

Query: 346 IYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKT 393
           + GER L + KW RF +V  +P++   +KI    +  +L +T P++T
Sbjct: 76  VTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKET 105

[Close]
BLAST of Cp4.1LG05g08590 vs. Swiss-Prot
Match: RTM2A_ARATH (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.8e-06
Identity = 32/107 (29.91%), Postives = 51/107 (47.66%), Query Frame = 1 

Query: 286 YRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTSTSKLR 345
           Y DF P  +    PE+ +L I L GF +  +KV                   V S+  +R
Sbjct: 16  YEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTY-----------------VHSSKMIR 75

Query: 346 IYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKT 393
           + GER L + KW RF +V  +P++   +KI    +  +L +T P++T
Sbjct: 76  VTGERPLANRKWNRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKET 105

[Close]
BLAST of Cp4.1LG05g08590 vs. TrEMBL
Match: A0A0A0M2E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600110 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 8.0e-30
Identity = 74/138 (53.62%), Postives = 95/138 (68.84%), Query Frame = 1 

Query: 60  SSSKSYRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTS 119
           SS+K + +FEP  D + +P++ +L++HL GF  N LKV                  QVTS
Sbjct: 5   SSAKKFEEFEPRFDWVDHPDARVLVVHLSGFRSNQLKV------------------QVTS 64

Query: 120 TSKLRIYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAVSSNNP 179
           T KLR+ GER+L+SGKWLRF K I+IP DADT+ ISAKLE+G+LYV QP+K SA SSN P
Sbjct: 65  TGKLRVSGERKLSSGKWLRFQKEIDIPADADTDNISAKLEQGVLYVKQPKKPSATSSNIP 124

Query: 180 PAQPPKPTAESQPPPTTS 198
           P Q PKP A+SQPPP+ +
Sbjct: 125 PVQQPKPKAQSQPPPSAT 124

[Close]
BLAST of Cp4.1LG05g08590 vs. TrEMBL
Match: A0A0A0LWW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600100 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.6e-28
Identity = 80/161 (49.69%), Postives = 102/161 (63.35%), Query Frame = 1 

Query: 276 AMLMDSSSKSYRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLT 335
           AM   SS+K++ +FEP  D +H+P+SH+L++HL  F  N L+V                 
Sbjct: 2   AMNPSSSAKNFEEFEPRFDWVHHPDSHVLVVHLSDFKSNQLEV----------------- 61

Query: 336 DQVTSTSKLRIYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAV 395
            QVTST KLR+ G+R L++G WLRF K I+IP DADT+KISAKLE+GILYV QP+K SA 
Sbjct: 62  -QVTSTGKLRVSGDRMLSNGTWLRFEKEIDIPADADTDKISAKLEQGILYVKQPKKPSAT 121

Query: 396 SSNNPPAQPPKPTAESQPPP--TTSTREGGWVRREEWLRRN 435
           SSN PP Q  KP  +SQ PP  T  T +   VR +   RRN
Sbjct: 122 SSNIPPVQQSKPKVQSQHPPAATKPTADPPTVRPKAPNRRN 144

[Close]
BLAST of Cp4.1LG05g08590 vs. TrEMBL
Match: A0A0D3EHR5_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 8.0e-14
Identity = 85/352 (24.15%), Postives = 136/352 (38.64%), Query Frame = 1 

Query: 65  YRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTSTSKLR 124
           + DF P  +    PE+ LL I L  FT+  +KV      K+                 L+
Sbjct: 16  HEDFVPKSEWKDQPEATLLTIDLPDFTKEQIKVTYVHASKM-----------------LK 75

Query: 125 IYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAVSSNNPPAQPP 184
           + GER L   KW RF +   +P++   +K+       +L +T P+KT     + P A   
Sbjct: 76  VTGERPLAGRKWSRFNEAFTVPQNCLVDKLRGSFNNNVLTITMPKKTIRKMPDLPEAPKT 135

Query: 185 KPTAESQPPPTTSTREGGWVRREEWLRRNMVNLALGAAVLRRRISEADFESKDRTNCHGQ 244
                 +        E     +EE + +    L    A+LR+   EA  +         +
Sbjct: 136 GDEKVGKLEEKRLLEESIRKAKEEEVEKKKKLLEEREAILRKLQEEAKTKEMAERRKLQE 195

Query: 245 STKRKLQAKELLIAKKFLDFQKQNYRKEKSNAMLMD--------------SSSKSYRDFE 304
             K K +A+   + ++ +  +K   RK +  A   +                   Y DF 
Sbjct: 196 EAKAKERAEAKRLQEEAIAKEKAEARKLQEKAKAKELFPLTATRHQPRGTGLGVQYEDFV 255

Query: 305 PLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTSTSKLRIYGER 364
           P       PE+ LL I+L GFT+  +K                 T  V ++  LR+ GER
Sbjct: 256 PNSGWKDQPEATLLTINLPGFTKEQIK-----------------TTYVHTSKMLRVTGER 315

Query: 365 RLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAVSSNNPPA 403
            L   +W RF +V ++P +   +KI        L +T P++T    SN P A
Sbjct: 316 PLAGRRWSRFNEVFSVPHNCLVDKIHGNFNNNSLTITMPKETITKMSNLPEA 333

[Close]
BLAST of Cp4.1LG05g08590 vs. TrEMBL
Match: A0A0A0LZR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600120 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.2e-12
Identity = 50/104 (48.08%), Postives = 71/104 (68.27%), Query Frame = 1 

Query: 106 RTSGERRLTDQVTSTSKLRIYG----ERRLTSGKWLRFLKVINIPEDADTNKISAKLEKG 165
           R + ++  T+++T+  ++ I+G    +  LT+GKWLRF K I+IP+DADT+KIS+KLE+G
Sbjct: 10  RGNTKKASTEEITNPKEIPIWGLQFQKAALTNGKWLRFQKEIDIPDDADTDKISSKLEQG 69

Query: 166 ILYVTQPRKTSAVSSNNPPAQ-----PPKP--TAESQPPPTTST 199
           ILYV QP+K SA SSN PP+Q     P KP  T  +  PPT  +
Sbjct: 70  ILYVKQPKKPSATSSNIPPSQNERDEPLKPAATEPTVAPPTVGS 113

[Close]
BLAST of Cp4.1LG05g08590 vs. TrEMBL
Match: A0A078ECM6_BRANA (BnaC09g50380D protein OS=Brassica napus GN=BnaC09g50380D PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.7e-11
Identity = 87/357 (24.37%), Postives = 143/357 (40.06%), Query Frame = 1 

Query: 65  YRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTSTSKLR 124
           + DF P  +    PE+ LL I L  FT+  +K                 T  + ++  LR
Sbjct: 16  HEDFVPKSEWKDQPEATLLTIDLPDFTKEQIK-----------------TTYLQTSKMLR 75

Query: 125 IYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAVS-----SNNP 184
           + GER L   +W RF +V ++P +   +KI        L +T P++ + +S     S N 
Sbjct: 76  VTGERPLAGRRWSRFNEVFSVPHNCLVDKIHGNFNNNSLTITMPKEITKMSNLPETSKNM 135

Query: 185 PAQPPKPTAESQPPPTTSTREGGWVRREEWLRRNMVNLALGAAVLRRRISEADFESKDRT 244
             +  K   E +     S R+     +E+ + +    L    A+LR+   EA  +     
Sbjct: 136 AEKFEK--LEEKRLLEQSIRKA----KEKEVEKKKKLLEEREAILRKLQEEAKTKEMAER 195

Query: 245 NCHGQSTKRKLQAKELLIAKKFLDFQKQNYRKEKSNAMLMD--------------SSSKS 304
               +  K K +A+   + ++ +  +K   RK +  A   +                   
Sbjct: 196 RKLQEEAKAKERAEAKRLQEEAIAKEKAEARKLQEKAKAKELFPLTATRHQPRGTGLGVQ 255

Query: 305 YRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTSTSKLR 364
           Y DF P       PE+ LL I+L GFT+  +K                 T  V ++  LR
Sbjct: 256 YEDFVPNSGWKDQPEATLLTINLPGFTKEQIK-----------------TTYVQTSKMLR 315

Query: 365 IYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAVSSNNPPA 403
           + GER L   +W RF +V ++P +   +KI        L +T P++T    SN P A
Sbjct: 316 VTGERPLAGRRWSRFNEVFSVPHNCLVDKIHGNFNNNSLTITMPKETITKMSNLPEA 332

[Close]
BLAST of Cp4.1LG05g08590 vs. TAIR10
Match: AT5G20970.1 (AT5G20970.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 59.7 bits (143), Expect = 5.3e-09
Identity = 35/116 (30.17%), Postives = 54/116 (46.55%), Query Frame = 1 

Query: 65  YRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTSTSKLR 124
           Y++FEP       P++ +L+  L GF +  LKV                   VT+T KLR
Sbjct: 10  YQEFEPATRWTSEPDAEVLVADLPGFKKEQLKV------------------SVTATRKLR 69

Query: 125 IYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAVSSNNPP 181
           + GER     KW+RF + I +P   D + +SA  +   LY+  P+  + +    PP
Sbjct: 70  LTGERPTGGNKWIRFHQEIPVPLTVDIDSVSAMFKDNKLYIRHPKLKTEIPQTKPP 107

[Close]
BLAST of Cp4.1LG05g08590 vs. TAIR10
Match: AT2G27140.1 (AT2G27140.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 59.7 bits (143), Expect = 5.3e-09
Identity = 48/154 (31.17%), Postives = 70/154 (45.45%), Query Frame = 1 

Query: 60  SSSKSYRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTS 119
           ++++ Y +FEPL +         L I+L GF +  LKV                  QVT+
Sbjct: 9   NANRIYDEFEPLSNWKTEQGFEALTIYLPGFRKEQLKV------------------QVTT 68

Query: 120 TSKLRIYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPR-------KTS 179
           T KLR+ G+R   + KW+RF K   IP + D + +SAK E   L V  PR        + 
Sbjct: 69  TRKLRVMGDRPAGANKWIRFRKEFPIPPNIDVDSVSAKFEGANLVVRLPRTEPMGKQPSP 128

Query: 180 AVSSNNPPAQP------PKPTAESQPPPTTSTRE 201
             ++  PP  P      P P+A+ +  P   TRE
Sbjct: 129 IGTATKPPPVPKENPNLPSPSAKEKVQPPKETRE 144

[Close]
BLAST of Cp4.1LG05g08590 vs. TAIR10
Match: AT5G04890.1 (AT5G04890.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 55.8 bits (133), Expect = 7.7e-08
Identity = 32/107 (29.91%), Postives = 51/107 (47.66%), Query Frame = 1 

Query: 286 YRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTSTSKLR 345
           Y DF P  +    PE+ +L I L GF +  +KV                   V S+  +R
Sbjct: 16  YEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTY-----------------VHSSKMIR 75

Query: 346 IYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKT 393
           + GER L + KW RF +V  +P++   +KI    +  +L +T P++T
Sbjct: 76  VTGERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKET 105

[Close]
BLAST of Cp4.1LG05g08590 vs. NCBI nr
Match: gi|659100303|ref|XP_008451026.1| (PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 143.7 bits (361), Expect = 7.9e-31
Identity = 76/138 (55.07%), Postives = 95/138 (68.84%), Query Frame = 1 

Query: 60  SSSKSYRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTS 119
           SS+K++ +FEP  D +H+P+SH+L++HL GF  N LKV                  QVTS
Sbjct: 5   SSAKNFEEFEPRFDWVHHPDSHVLVVHLSGFRSNQLKV------------------QVTS 64

Query: 120 TSKLRIYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAVSSNNP 179
           T KLR+ GER+L +GKWLRF K I+IP DADT+KISAKLE+GILYV QP+K    SSN P
Sbjct: 65  TGKLRVSGERKLGNGKWLRFEKEIDIPADADTDKISAKLEEGILYVKQPKKLPTTSSNIP 124

Query: 180 PAQPPKPTAESQPPPTTS 198
           P Q PKP A+SQPPP  +
Sbjct: 125 PVQQPKPKAQSQPPPAAT 124

[Close]
BLAST of Cp4.1LG05g08590 vs. NCBI nr
Match: gi|659100301|ref|XP_008451025.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 143.7 bits (361), Expect = 7.9e-31
Identity = 76/138 (55.07%), Postives = 95/138 (68.84%), Query Frame = 1 

Query: 60  SSSKSYRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTS 119
           SS+K++ +FEP  D +H+P+SH+L++HL GF  N LKV                  QVTS
Sbjct: 5   SSAKNFEEFEPRFDWVHHPDSHVLVVHLSGFRSNQLKV------------------QVTS 64

Query: 120 TSKLRIYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAVSSNNP 179
           T KLR+ GER+L +GKWLRF K I+IP DADT+KISAKLE+GILYV QP+K    SSN P
Sbjct: 65  TGKLRVSGERKLGNGKWLRFEKEIDIPADADTDKISAKLEEGILYVKQPKKLPTTSSNIP 124

Query: 180 PAQPPKPTAESQPPPTTS 198
           P Q PKP A+SQPPP  +
Sbjct: 125 PVQQPKPKAQSQPPPAAT 124

[Close]
BLAST of Cp4.1LG05g08590 vs. NCBI nr
Match: gi|659100306|ref|XP_008451028.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis melo])

HSP 1 Score: 142.1 bits (357), Expect = 2.3e-30
Identity = 76/138 (55.07%), Postives = 96/138 (69.57%), Query Frame = 1 

Query: 60  SSSKSYRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTS 119
           SS+K++++FEP  D +H+P+SH+L++ L GF  N LKV                  QVTS
Sbjct: 5   SSAKNFQEFEPRYDWVHHPDSHVLVVRLSGFRSNQLKV------------------QVTS 64

Query: 120 TSKLRIYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAVSSNNP 179
           T KLR+ GER+L +GKWLRF K I+IP DADT+KISAKLE+GILYV QP+K SA SSN P
Sbjct: 65  TGKLRVSGERKLGNGKWLRFEKEIDIPADADTDKISAKLEEGILYVKQPKKLSATSSNIP 124

Query: 180 PAQPPKPTAESQPPPTTS 198
           P Q PKP  +SQPPP  +
Sbjct: 125 PVQQPKPKPQSQPPPAAT 124

[Close]
BLAST of Cp4.1LG05g08590 vs. NCBI nr
Match: gi|778665351|ref|XP_004144143.2| (PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29
Identity = 74/138 (53.62%), Postives = 95/138 (68.84%), Query Frame = 1 

Query: 60  SSSKSYRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTS 119
           SS+K + +FEP  D + +P++ +L++HL GF  N LKV                  QVTS
Sbjct: 5   SSAKKFEEFEPRFDWVDHPDARVLVVHLSGFRSNQLKV------------------QVTS 64

Query: 120 TSKLRIYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAVSSNNP 179
           T KLR+ GER+L+SGKWLRF K I+IP DADT+ ISAKLE+G+LYV QP+K SA SSN P
Sbjct: 65  TGKLRVSGERKLSSGKWLRFQKEIDIPADADTDNISAKLEQGVLYVKQPKKPSATSSNIP 124

Query: 180 PAQPPKPTAESQPPPTTS 198
           P Q PKP A+SQPPP+ +
Sbjct: 125 PVQQPKPKAQSQPPPSAT 124

[Close]
BLAST of Cp4.1LG05g08590 vs. NCBI nr
Match: gi|778665348|ref|XP_011648542.1| (PREDICTED: protein RESTRICTED TEV MOVEMENT 2-like [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 3.7e-28
Identity = 80/161 (49.69%), Postives = 102/161 (63.35%), Query Frame = 1 

Query: 276 AMLMDSSSKSYRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLT 335
           AM   SS+K++ +FEP  D +H+P+SH+L++HL  F  N L+V                 
Sbjct: 2   AMNPSSSAKNFEEFEPRFDWVHHPDSHVLVVHLSDFKSNQLEV----------------- 61

Query: 336 DQVTSTSKLRIYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAV 395
            QVTST KLR+ G+R L++G WLRF K I+IP DADT+KISAKLE+GILYV QP+K SA 
Sbjct: 62  -QVTSTGKLRVSGDRMLSNGTWLRFEKEIDIPADADTDKISAKLEQGILYVKQPKKPSAT 121

Query: 396 SSNNPPAQPPKPTAESQPPP--TTSTREGGWVRREEWLRRN 435
           SSN PP Q  KP  +SQ PP  T  T +   VR +   RRN
Sbjct: 122 SSNIPPVQQSKPKVQSQHPPAATKPTADPPTVRPKAPNRRN 144

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g08590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RTM2D_ARATH4.7e-0730.84Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 ... [more]
RTM2B_ARATH1.4e-0629.91Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 ... [more]
RTM2C_ARATH1.4e-0629.91Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 ... [more]
RTM2_ARATH1.4e-0629.91Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=2 SV=1[more]
RTM2A_ARATH1.8e-0629.91Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 ... [more]
BLAST of Cp4.1LG05g08590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M2E7_CUCSA8.0e-3053.62Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600110 PE=3 SV=1[more]
A0A0A0LWW1_CUCSA2.6e-2849.69Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600100 PE=3 SV=1[more]
A0A0D3EHR5_BRAOL8.0e-1424.15Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1[more]
A0A0A0LZR6_CUCSA1.2e-1248.08Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600120 PE=3 SV=1[more]
A0A078ECM6_BRANA1.7e-1124.37BnaC09g50380D protein OS=Brassica napus GN=BnaC09g50380D PE=3 SV=1[more]
BLAST of Cp4.1LG05g08590 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G20970.15.3e-0930.17 HSP20-like chaperones superfamily protein[more]
AT2G27140.15.3e-0931.17 HSP20-like chaperones superfamily protein[more]
AT5G04890.17.7e-0829.91 HSP20-like chaperones superfamily protein[more]
BLAST of Cp4.1LG05g08590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659100303|ref|XP_008451026.1|7.9e-3155.07PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like isoform X2 [Cucumis m... [more]
gi|659100301|ref|XP_008451025.1|7.9e-3155.07PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X... [more]
gi|659100306|ref|XP_008451028.1|2.3e-3055.07PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis ... [more]
gi|778665351|ref|XP_004144143.2|1.1e-2953.62PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucumis sativus][more]
gi|778665348|ref|XP_011648542.1|3.7e-2849.69PREDICTED: protein RESTRICTED TEV MOVEMENT 2-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR002068A-crystallin/Hsp20_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g08590.1Cp4.1LG05g08590.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 80..173
score: 3.0E-6coord: 301..394
score: 3.
IPR002068Alpha crystallin/Hsp20 domainPROFILEPS01031HSP20coord: 294..390
score: 13.714coord: 73..169
score: 13
IPR008978HSP20-like chaperoneGENE3DG3DSA:2.60.40.790coord: 56..172
score: 8.6E-12coord: 277..393
score: 8.6
IPR008978HSP20-like chaperoneunknownSSF49764HSP20-like chaperonescoord: 281..393
score: 6.8E-11coord: 60..172
score: 6.8
NoneNo IPR availablePANTHERPTHR11527:SF156HEAT SHOCK FAMILY PROTEINcoord: 65..188
score: 9.9

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g08590Cucurbita maxima (Rimu)cmacpeB099
Cp4.1LG05g08590Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g08590Cucurbita moschata (Rifu)cmocpeB075
Cp4.1LG05g08590Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g08590Wild cucumber (PI 183967)cpecpiB758
Cp4.1LG05g08590Cucumber (Chinese Long) v2cpecuB755
Cp4.1LG05g08590Bottle gourd (USVL1VR-Ls)cpelsiB588
Cp4.1LG05g08590Bottle gourd (USVL1VR-Ls)cpelsiB628
Cp4.1LG05g08590Watermelon (Charleston Gray)cpewcgB658
Cp4.1LG05g08590Watermelon (Charleston Gray)cpewcgB672
Cp4.1LG05g08590Watermelon (97103) v1cpewmB695
Cp4.1LG05g08590Watermelon (97103) v1cpewmB744
Cp4.1LG05g08590Melon (DHL92) v3.5.1cpemeB668
Cp4.1LG05g08590Melon (DHL92) v3.6.1cpemedB798
Cp4.1LG05g08590Cucumber (Chinese Long) v3cpecucB0878
Cp4.1LG05g08590Cucumber (Chinese Long) v3cpecucB0936
Cp4.1LG05g08590Wax gourdcpewgoB0972