Cp4.1LG05g08590 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAAGTGACCAAAACAACACATCTCTTAACCCTCTTGCATCAAACAACCGCCATGGCCGAAGCACAAAGAAAGCTTCAAACAAAGGAATTACTAATCCCAAAGAAATTCTTATGTGCGATCGCAACTTCAGAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGGTTTCGAATCAAGATCTCCATTCGATATAAAGAATGCCTCGAAGACATCGAAAGAAATAGTCATCAAGAGAAGTTAGAGCAAAGAGAAATTAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTGACATTTTCCCCTTCGAGTTTTGCAAGTTTCAAAATATATTTTCAAAAATATCATTAATTATCTGTTAGTATTATTATTATTAACCATAATCATAAATTTTTTAAATTGAGTTTGTCAATTATTTAATTTTTTTAATAAAATTAAAATATTAATTCATAATATATATATATTAATATTTAATAAAAATTCACTATTTAATTTTAATATATTTTTAAAAAATAACCTTCCAAATTACTATATATTATTTTCAAGCGTTATTAAAAATAAATTAATATTAAATATATATAAATTATATTGTAAACAAATATATATTTTTTAAATTAATAATAAATTTGAATTTGTTGAATTTAACAAATTTTTGGATGTATCAGATTTCCAGAATACCGTTAGATCAAATAGCTTAAAAATAAAATAGAAATTAAATTAATTTATGAAAATTTGAACTTACCATTGAATTTTCGATCTTTTCTGCAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTTGTGATTGTGTATCTCTGCTGTTTTTGTCATTGTGTATCTCAATCTTACAAAGAATGATCATATGGAGGAACAGTGGTGAAGAAGAACAAGAAGCTATGAATCAACATCTAGTTTATGAGTGAACAATGGAACCAAATTCGTTGCCCCGGATTCGGGCACCGACAATAAAATTGCTATAGAGCTGCTACTTCACCTTTACGCTAAGGAAAAGAAAAAGATTAAACCAAAACCTTAAACCTTTTCCTATGTTTTAGGGTCGGTAAAAGAAAAGAGATTCATTCGACTTAACTCCTAAGGGAGAGGAAAGACGAAACATTAATTCGACTAAACCTGATTTCACTCTGACTCAAACTTCAACGACATCTTTTTTAGTGTTACATAAACTACAACTCCTAAAATTGGTCTGAGGCATATGCCCATTGTCAGTTAAAAGTTCAAACGTTCAAATTTCTAGCCTAACATGTCGGTGAGCTAAAAAACACGACTAAATAGTATATTTACGACTACGACTCGAACTTCAACGACATCTTTTTTAGCATTACGTAAACTACGACTCCTCAAACTGGTCAAGGCATATATCCATTGTCAACCNGAAAGAAACAAAAAGAATCTTCGTTTTACCAATGGACAAAGTGACCAAAACAACACATCTCTTAACCCTCTTGCATCAAACAACCGCCATGGCCGAAGCACAAAGAAAGCTTCAAACAAAGGAATTACTAATCCCAAAGAAATTCTTATGTGCGATCGCAACTTCAGAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGGTTTCGAATCAAGATCTCCATTCGATATAAAGAATGCCTCGAAGACATCGAAAGAAATAGTCATCAAGAGAAGTTAGAGCAAAGAGAAATTAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTGACATTTTCCCCTTCGAGTTTTGCAAGTTTCAAAATATATTTTCAAAAATATCATTAATTATCTGTTAGTATTATTATTATTAACCATAATCATAAATTTTTTAAATTGAGTTTGTCAATTATTTAATTTTTTTAATAAAATTAAAATATTAATTCATAATATATATATATTAATATTTAATAAAAATTCACTATTTAATTTTAATATATTTTTAAAAAATAACCTTCCAAATTACTATATATTATTTTCAAGCGTTATTAAAAATAAATTAATATTAAATATATATAAATTATATTGTAAACAAATATATATTTTTTAAATTAATAATAAATTTGAATTTGTTGAATTTAACAAATTTTTGGATGTATCAGATTTCCAGAATACCGTTAGATCAAATAGCTTAAAAATAAAATAGAAATTAAATTAATTTATGAAAATTTGAACTTACCATTGAATTTTCGATCTTTTCTGCAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTT ATGGACAAAAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTTAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTT ATGGACAAAAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTTAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTT MDKRRRISEADFESKDRTNCHGQSTKRKLQAKELLIAKKFLDFQKQNYRKEKSNAMLMDSSSKSYRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTSTSKLRIYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAVSSNNPPAQPPKPTAESQPPPTTSTREGGWVRREEWLRRNMVNLALGAAVLRRRISEADFESKDRTNCHGQSTKRKLQAKELLIAKKFLDFQKQNYRKEKSNAMLMDSSSKSYRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTSTSKLRIYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAVSSNNPPAQPPKPTAESQPPPTTSTREGGWVRREEWLRRNMVNLALGAAVL
BLAST of Cp4.1LG05g08590 vs. Swiss-Prot
Match: RTM2D_ARATH (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 4.7e-07 Identity = 33/107 (30.84%), Postives = 52/107 (48.60%), Query Frame = 1
BLAST of Cp4.1LG05g08590 vs. Swiss-Prot
Match: RTM2B_ARATH (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.4e-06 Identity = 32/107 (29.91%), Postives = 51/107 (47.66%), Query Frame = 1
BLAST of Cp4.1LG05g08590 vs. Swiss-Prot
Match: RTM2C_ARATH (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.4e-06 Identity = 32/107 (29.91%), Postives = 51/107 (47.66%), Query Frame = 1
BLAST of Cp4.1LG05g08590 vs. Swiss-Prot
Match: RTM2_ARATH (Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.4e-06 Identity = 32/107 (29.91%), Postives = 51/107 (47.66%), Query Frame = 1
BLAST of Cp4.1LG05g08590 vs. Swiss-Prot
Match: RTM2A_ARATH (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.8e-06 Identity = 32/107 (29.91%), Postives = 51/107 (47.66%), Query Frame = 1
BLAST of Cp4.1LG05g08590 vs. TrEMBL
Match: A0A0A0M2E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600110 PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 8.0e-30 Identity = 74/138 (53.62%), Postives = 95/138 (68.84%), Query Frame = 1
BLAST of Cp4.1LG05g08590 vs. TrEMBL
Match: A0A0A0LWW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600100 PE=3 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 2.6e-28 Identity = 80/161 (49.69%), Postives = 102/161 (63.35%), Query Frame = 1
BLAST of Cp4.1LG05g08590 vs. TrEMBL
Match: A0A0D3EHR5_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 8.0e-14 Identity = 85/352 (24.15%), Postives = 136/352 (38.64%), Query Frame = 1
BLAST of Cp4.1LG05g08590 vs. TrEMBL
Match: A0A0A0LZR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600120 PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.2e-12 Identity = 50/104 (48.08%), Postives = 71/104 (68.27%), Query Frame = 1
BLAST of Cp4.1LG05g08590 vs. TrEMBL
Match: A0A078ECM6_BRANA (BnaC09g50380D protein OS=Brassica napus GN=BnaC09g50380D PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.7e-11 Identity = 87/357 (24.37%), Postives = 143/357 (40.06%), Query Frame = 1
BLAST of Cp4.1LG05g08590 vs. TAIR10
Match: AT5G20970.1 (AT5G20970.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 59.7 bits (143), Expect = 5.3e-09 Identity = 35/116 (30.17%), Postives = 54/116 (46.55%), Query Frame = 1
BLAST of Cp4.1LG05g08590 vs. TAIR10
Match: AT2G27140.1 (AT2G27140.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 59.7 bits (143), Expect = 5.3e-09 Identity = 48/154 (31.17%), Postives = 70/154 (45.45%), Query Frame = 1
BLAST of Cp4.1LG05g08590 vs. TAIR10
Match: AT5G04890.1 (AT5G04890.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 55.8 bits (133), Expect = 7.7e-08 Identity = 32/107 (29.91%), Postives = 51/107 (47.66%), Query Frame = 1
BLAST of Cp4.1LG05g08590 vs. NCBI nr
Match: gi|659100303|ref|XP_008451026.1| (PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like isoform X2 [Cucumis melo]) HSP 1 Score: 143.7 bits (361), Expect = 7.9e-31 Identity = 76/138 (55.07%), Postives = 95/138 (68.84%), Query Frame = 1
BLAST of Cp4.1LG05g08590 vs. NCBI nr
Match: gi|659100301|ref|XP_008451025.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo]) HSP 1 Score: 143.7 bits (361), Expect = 7.9e-31 Identity = 76/138 (55.07%), Postives = 95/138 (68.84%), Query Frame = 1
BLAST of Cp4.1LG05g08590 vs. NCBI nr
Match: gi|659100306|ref|XP_008451028.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis melo]) HSP 1 Score: 142.1 bits (357), Expect = 2.3e-30 Identity = 76/138 (55.07%), Postives = 96/138 (69.57%), Query Frame = 1
BLAST of Cp4.1LG05g08590 vs. NCBI nr
Match: gi|778665351|ref|XP_004144143.2| (PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucumis sativus]) HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29 Identity = 74/138 (53.62%), Postives = 95/138 (68.84%), Query Frame = 1
BLAST of Cp4.1LG05g08590 vs. NCBI nr
Match: gi|778665348|ref|XP_011648542.1| (PREDICTED: protein RESTRICTED TEV MOVEMENT 2-like [Cucumis sativus]) HSP 1 Score: 134.8 bits (338), Expect = 3.7e-28 Identity = 80/161 (49.69%), Postives = 102/161 (63.35%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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