Cp4.1LG05g07340 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG05g07340
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionKRR1 family protein
LocationCp4.1LG05 : 4496695 .. 4498752 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGGACCTGGAGTTCTTCAATGCATTAATCAAGGTCAAGAATTGGGATCCGACCCTTAAACAGAAAGATGCCAAGCTTTTCGATTCAGATGATGACAGCCATGACAAAGACAGTGATGACATCAATAGTAGTTTAACAGAGAAGAAGAAGAGCAGTATGTACTTGAAAGATGTGATAGCGAAACATTTGATTGAAGAGGGCACCGAATTTGATGATGAGAGGACTAAAAACATGAAGATTCATAGATAAGGAGCAGGAAGAGATACGCAAGGCATTCTTTGAGGCAGCAGAAGTGCAAGATGATGAAGATGGTGGGGAAGAGTTGTTAAAAGTGAAGGAGCGATGATGATGGTGAGGAATAGGGGAAGACGAAACTTGCTTATTGGATGTCAAAGATTTAGATGAGGATTTTGATCCAGAAGAGTATGACAAGATGATGAAGGTAGCTTTTGGTGAAGAATAATACGAGAAAGCGGACGATGCTCCTGAGTTCTGAAGTGATATGGATAATGAAGGTGATGATGATATCGAGAAACCTGATTTTGAAAAAGAGGACGAGTTGCTTGGATTGCCAAGAGGGTGGGCGTCATCTGAGTCGGGCGATGGCTTCTTAGCAGCTAGGGAAAGGAGTTTAGAACATAAAATTGATAGTGATCTGAGTAATGAGGATAATGAAGAAGAGGGTGAAGAACCAAGGAACTAGACAGCGCCTGAAAATGAGGACCAAGGAACTCCTAAGAGGCAAACAATTTGGTAAACAGAAAGGCAGCGTGAAGAAGAGGATGAAGAACAGCTCCGACATGCACATTGTGGATAACAATGAGAATGACAAAGTACAGATTGAGGATTCAAATGGCGATAGGGGAAATTTATCGAGGAAAGCCAGGCGAAAACAGCGACAAGCTGAATATAAATTGTCAGATGCTTGGCTCCAGGGATACGCCAAGATGATCTCGAAACCTAAGAGGGAAACAAAACACTAACCATTGGAAATCAATTGCCGTACTTTAGCAGGTGATTCTTCTTTTTAGTCATTAATGAGATAGCTTCATCTTCACTCCTTGCGGTGTCTTGTTATAGCAAACAAAGTACTGCAGGTTGGTTTTTTCATTTTTATTATTTTGATTCGCATTTAATTCTTTGGGATAAAACCTATTCATATTCAACTTGTTATATTGTTAAAGATGGAATCTAAAAGCTTTGGTTTAGTAGATCTTGTGCTCAAACTCTTACTATTTGTAATCTTGTCATTAACCCTTTTAGGCAAACTTCATTACCCATTCTAAGGTTTCTGAGTTTTGGAGATAAATCACAAAAAAGAACGGACCCTTTTCAGACAATGACTGGAAATCTGCGAAGGAAAGATCAGGCGGCCTTCTTCCCCATTGAGGTCAGTTTATATGCACTTCATTACAATAATTGGCTTCCCAGAATGATAACAGAACTGCTTTGTTATTATTGTTTTTTCATATGAAATAATATGGGTATTTCAGTAAAAGGAGCAAAGGAACTTGGACTTGCAAGGAGGCTCTGAAACCAGTTTCGATCACGAAGAACACAGTTTGAAGCTCACATTTGAAGCTCACATTTCGCCCTCAAATGTGCAGGAAACAAACATAAAATCCTGGCATGATATCAACTATGTTGGATGATGGAAGTCCCACATCGACTAATTTAGGGAATGATCATGGGTTTATAAGTGAGGAATACTAACTCCATTGGTATGAGGCCTTCTGGGGAAGCCCAAAGCAAAGAATGATCATGGGTTTATAAGTGAGGAATACTAACTCCATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGTTCAGAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCATCTAACAAACTATTTCCATTGCTTACATTTAAAAGGAAATGTTTTTGAGTAGTTGGGCTCTTAGTTAGGTGTATAAATTATCTTTGGATTTGGATAAATGTTGTGATTCTGATTAATTTTATAACAAAAGTTTTATTATAATTGTCTAATTATTAAGTGCAAGTTTGTAGCT

mRNA sequence

AAGGACCTGGAGTTCTTCAATGCATTAATCAAGGTCAAGAATTGGGATCCGACCCTTAAACAGAAAGATGCCAAGCTTTTCGATTCAGATGATGACAGCCATGACAAAGACAGTGATGACATCAATAGTAGTTTAACAGAGAAGAAGAAGAGCAATAAGGAGCAGGAAGAGATACGCAAGGCATTCTTTGAGGCAGCAGAAGTGCAAGATGATGAAGATGGTGATGATGATATCGAGAAACCTGATTTTGAAAAAGAGGACGAGTTGCTTGGATTGCCAAGAGGGTGGGCGTCATCTGAGTCGGGCGATGGCTTCTTAGCAGCTAGGGAAAGGAGTTTAGAACATAAAATTGATATAATGAGGATAATGAAGAAGAGGGTGAAGAACCAAGGAACTAGACAGCGCCTGAAAATGAGGACCAAGGAACTCCTAAGAGGCAAACAATTTGGTAAACAGAAAGGCAGCGTGAAGAAGAGGATGAAGAACAGCTCCGACATGCACATTGTGGATAACAATGAGAATGACAAAGTACAGATTGAGGATTCAAATGGCGATAGGGGAAATTTATCGAGGAAAGCCAGGCGAAAACAGCGACAAGCTGAATATAAATTGCAAACTTCATTACCCATTCTAAGGTTTCTGAGTTTTGGAGATAAATCACAAAAAAGAACGGACCCTTTTCAGACAATGACTGGAAATCTGCGAAGGAAAGATCAGGCGGCCTTCTTCCCCATTGAGTGCAAGTTTGTAGCT

Coding sequence (CDS)

AAGGACCTGGAGTTCTTCAATGCATTAATCAAGGTCAAGAATTGGGATCCGACCCTTAAACAGAAAGATGCCAAGCTTTTCGATTCAGATGATGACAGCCATGACAAAGACAGTGATGACATCAATAGTAGTTTAACAGAGAAGAAGAAGAGCAATAAGGAGCAGGAAGAGATACGCAAGGCATTCTTTGAGGCAGCAGAAGTGCAAGATGATGAAGATGGTGATGATGATATCGAGAAACCTGATTTTGAAAAAGAGGACGAGTTGCTTGGATTGCCAAGAGGGTGGGCGTCATCTGAGTCGGGCGATGGCTTCTTAGCAGCTAGGGAAAGGAGTTTAGAACATAAAATTGATATAATGAGGATAATGAAGAAGAGGGTGAAGAACCAAGGAACTAGACAGCGCCTGAAAATGAGGACCAAGGAACTCCTAAGAGGCAAACAATTTGGTAAACAGAAAGGCAGCGTGAAGAAGAGGATGAAGAACAGCTCCGACATGCACATTGTGGATAACAATGAGAATGACAAAGTACAGATTGAGGATTCAAATGGCGATAGGGGAAATTTATCGAGGAAAGCCAGGCGAAAACAGCGACAAGCTGAATATAAATTGCAAACTTCATTACCCATTCTAAGGTTTCTGAGTTTTGGAGATAAATCACAAAAAAGAACGGACCCTTTTCAGACAATGACTGGAAATCTGCGAAGGAAAGATCAGGCGGCCTTCTTCCCCATTGAGTGCAAGTTTGTAGCT

Protein sequence

KDLEFFNALIKVKNWDPTLKQKDAKLFDSDDDSHDKDSDDINSSLTEKKKSNKEQEEIRKAFFEAAEVQDDEDGDDDIEKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKIDIMRIMKKRVKNQGTRQRLKMRTKELLRGKQFGKQKGSVKKRMKNSSDMHIVDNNENDKVQIEDSNGDRGNLSRKARRKQRQAEYKLQTSLPILRFLSFGDKSQKRTDPFQTMTGNLRRKDQAAFFPIECKFVA
BLAST of Cp4.1LG05g07340 vs. TrEMBL
Match: A0A0A0KYR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G418560 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.3e-16
Identity = 69/145 (47.59%), Postives = 80/145 (55.17%), Query Frame = 1

Query: 1   KDLEFFNALIKVKNWDPTLKQKDAKLFDSDDDSHDKDSDDINSSLTEKKKS--------- 60
           KDL+FFNALIKVK  DPTLKQK+AKLFDSDDDSH K+SDD+  SLTEKKKS         
Sbjct: 74  KDLKFFNALIKVKKKDPTLKQKEAKLFDSDDDSHAKESDDVKGSLTEKKKSSMYLKDVVA 133

Query: 61  ---------------------NKEQEEIRKAFFEAAEVQDDEDGDDDIEKPDFEKEDELL 115
                                + EQEEIRKAF EAAE+QD+ D            E+ELL
Sbjct: 134 KHLIEEGPEFNDENTKNVKIYDTEQEEIRKAFLEAAELQDEND------------EEELL 193

BLAST of Cp4.1LG05g07340 vs. TrEMBL
Match: A0A0A0KD47_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G082010 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.3e-16
Identity = 59/106 (55.66%), Postives = 68/106 (64.15%), Query Frame = 1

Query: 1   KDLEFFNALIKVKNWDPTLKQKDAKLFDSDDDSHDKDSDDINSSLTEKKKS--------- 60
           KDL+FFNALIKVK  DPTLKQK+AKLFDSDDDSH K+SDD+  SLTEKKKS         
Sbjct: 151 KDLKFFNALIKVKKKDPTLKQKEAKLFDSDDDSHAKESDDVKGSLTEKKKSSMYLKDVVA 210

Query: 61  ---------------------NKEQEEIRKAFFEAAEVQDDEDGDD 77
                                +KEQEEIRKAF EAAEVQ++ D ++
Sbjct: 211 KHLIEEGPEFNDENTKNVKVYDKEQEEIRKAFLEAAEVQNENDEEE 256

BLAST of Cp4.1LG05g07340 vs. TrEMBL
Match: V4S3A7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011241mg PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.6e-09
Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 1

Query: 36  KDSDDINSSLTE--KKKSNKEQEEIRKAFFEAAEV----------QDDEDGDDDIEKPDF 95
           K+ +D+  SL +   +   +E + + KA F+A             QD E+ + DIEKPDF
Sbjct: 356 KEEEDLPMSLKDLDDEFDPEEYDRMMKAVFDAKYYDAEDVNPQFGQDREEDEGDIEKPDF 415

Query: 96  EKEDELLGLPRGWASSESGDGFLAARERSLEHKID 119
           +KEDELLGLP+GW   ESGDGF AARERSL+HK++
Sbjct: 416 DKEDELLGLPKGWDVIESGDGFKAARERSLKHKLE 450

BLAST of Cp4.1LG05g07340 vs. TrEMBL
Match: A0A067EFP3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006196mg PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.7e-09
Identity = 44/95 (46.32%), Postives = 60/95 (63.16%), Query Frame = 1

Query: 36  KDSDDINSSLTE--KKKSNKEQEEIRKAFFEAAEV----------QDDEDGDDDIEKPDF 95
           K+ +D+  SL +   +   +E + + KA F+A             QD E+ + DIEKPDF
Sbjct: 346 KEEEDLRMSLKDLDDEFDPEEYDRMMKAVFDAKYYDAEDVNPQFGQDREEDEGDIEKPDF 405

Query: 96  EKEDELLGLPRGWASSESGDGFLAARERSLEHKID 119
           +KEDELLGLP+GW    SGDGF AARERSL+HK++
Sbjct: 406 DKEDELLGLPKGWDVIVSGDGFKAARERSLKHKLE 440

BLAST of Cp4.1LG05g07340 vs. TrEMBL
Match: A0A067JVQ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18041 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-07
Identity = 41/111 (36.94%), Postives = 65/111 (58.56%), Query Frame = 1

Query: 19  LKQKDAKLFDS----DDDSHDKDSDDINSSLTEKKKSNKEQEEIRKAFFEAAEVQ----- 78
           +K+K  K+ ++    DD+    D +D+       +     ++   + ++ A +V      
Sbjct: 343 MKEKLMKVMEAAGIRDDNDFVLDLNDLEEDFDPSEYDKLMKKAFGEEYYNADDVDPGFGS 402

Query: 79  --DDEDGDDDIEKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKID 119
             DD+  DDD+EKPDF+KEDELLGLP+GW + ++ DGFLAARER L+ K +
Sbjct: 403 NNDDDKADDDVEKPDFDKEDELLGLPKGWEAVDNSDGFLAARERFLKKKAE 453

BLAST of Cp4.1LG05g07340 vs. NCBI nr
Match: gi|778694632|ref|XP_011653841.1| (PREDICTED: protein KRI1 homolog [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 9.0e-16
Identity = 69/145 (47.59%), Postives = 80/145 (55.17%), Query Frame = 1

Query: 1   KDLEFFNALIKVKNWDPTLKQKDAKLFDSDDDSHDKDSDDINSSLTEKKKS--------- 60
           KDL+FFNALIKVK  DPTLKQK+AKLFDSDDDSH K+SDD+  SLTEKKKS         
Sbjct: 74  KDLKFFNALIKVKKKDPTLKQKEAKLFDSDDDSHAKESDDVKGSLTEKKKSSMYLKDVVA 133

Query: 61  ---------------------NKEQEEIRKAFFEAAEVQDDEDGDDDIEKPDFEKEDELL 115
                                + EQEEIRKAF EAAE+QD+ D            E+ELL
Sbjct: 134 KHLIEEGPEFNDENTKNVKIYDTEQEEIRKAFLEAAELQDEND------------EEELL 193

BLAST of Cp4.1LG05g07340 vs. NCBI nr
Match: gi|700191108|gb|KGN46312.1| (hypothetical protein Csa_6G082010 [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 9.0e-16
Identity = 59/106 (55.66%), Postives = 68/106 (64.15%), Query Frame = 1

Query: 1   KDLEFFNALIKVKNWDPTLKQKDAKLFDSDDDSHDKDSDDINSSLTEKKKS--------- 60
           KDL+FFNALIKVK  DPTLKQK+AKLFDSDDDSH K+SDD+  SLTEKKKS         
Sbjct: 151 KDLKFFNALIKVKKKDPTLKQKEAKLFDSDDDSHAKESDDVKGSLTEKKKSSMYLKDVVA 210

Query: 61  ---------------------NKEQEEIRKAFFEAAEVQDDEDGDD 77
                                +KEQEEIRKAF EAAEVQ++ D ++
Sbjct: 211 KHLIEEGPEFNDENTKNVKVYDKEQEEIRKAFLEAAEVQNENDEEE 256

BLAST of Cp4.1LG05g07340 vs. NCBI nr
Match: gi|567872067|ref|XP_006428623.1| (hypothetical protein CICLE_v10011241mg [Citrus clementina])

HSP 1 Score: 70.9 bits (172), Expect = 3.7e-09
Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 1

Query: 36  KDSDDINSSLTE--KKKSNKEQEEIRKAFFEAAEV----------QDDEDGDDDIEKPDF 95
           K+ +D+  SL +   +   +E + + KA F+A             QD E+ + DIEKPDF
Sbjct: 356 KEEEDLPMSLKDLDDEFDPEEYDRMMKAVFDAKYYDAEDVNPQFGQDREEDEGDIEKPDF 415

Query: 96  EKEDELLGLPRGWASSESGDGFLAARERSLEHKID 119
           +KEDELLGLP+GW   ESGDGF AARERSL+HK++
Sbjct: 416 DKEDELLGLPKGWDVIESGDGFKAARERSLKHKLE 450

BLAST of Cp4.1LG05g07340 vs. NCBI nr
Match: gi|659133978|ref|XP_008466977.1| (PREDICTED: LOW QUALITY PROTEIN: protein KRI1 homolog, partial [Cucumis melo])

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-08
Identity = 43/110 (39.09%), Postives = 68/110 (61.82%), Query Frame = 1

Query: 19  LKQKDAKLFDS----DDDSHDKDSDDINSSLTEKKKSNKEQEEIRKAFFEAAEVQD---- 78
           +KQK  K+ ++    +D++   D  D++     ++     +    + ++E  ++      
Sbjct: 144 VKQKLRKIRETAGLGEDENCLLDIKDLDDDFDPEEYDRMMKVAFSEEYYEKEDIDPGFGS 203

Query: 79  --DEDGDDDIEKPDFEKEDELLGLPRGWASSESGDGFLAARERSLEHKID 119
             D++G+ + EKPDF+KEDELLGLP+GW SSESGDGF AAR+RSL HK+D
Sbjct: 204 DMDDEGNGEHEKPDFDKEDELLGLPKGWTSSESGDGFFAARQRSLSHKVD 253

BLAST of Cp4.1LG05g07340 vs. NCBI nr
Match: gi|641835037|gb|KDO54019.1| (hypothetical protein CISIN_1g006196mg [Citrus sinensis])

HSP 1 Score: 68.9 bits (167), Expect = 1.4e-08
Identity = 44/95 (46.32%), Postives = 60/95 (63.16%), Query Frame = 1

Query: 36  KDSDDINSSLTE--KKKSNKEQEEIRKAFFEAAEV----------QDDEDGDDDIEKPDF 95
           K+ +D+  SL +   +   +E + + KA F+A             QD E+ + DIEKPDF
Sbjct: 346 KEEEDLRMSLKDLDDEFDPEEYDRMMKAVFDAKYYDAEDVNPQFGQDREEDEGDIEKPDF 405

Query: 96  EKEDELLGLPRGWASSESGDGFLAARERSLEHKID 119
           +KEDELLGLP+GW    SGDGF AARERSL+HK++
Sbjct: 406 DKEDELLGLPKGWDVIVSGDGFKAARERSLKHKLE 440

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KYR7_CUCSA6.3e-1647.59Uncharacterized protein OS=Cucumis sativus GN=Csa_4G418560 PE=4 SV=1[more]
A0A0A0KD47_CUCSA6.3e-1655.66Uncharacterized protein OS=Cucumis sativus GN=Csa_6G082010 PE=4 SV=1[more]
V4S3A7_9ROSI2.6e-0947.37Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011241mg PE=4 SV=1[more]
A0A067EFP3_CITSI9.7e-0946.32Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006196mg PE=4 SV=1[more]
A0A067JVQ1_JATCU1.8e-0736.94Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18041 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|778694632|ref|XP_011653841.1|9.0e-1647.59PREDICTED: protein KRI1 homolog [Cucumis sativus][more]
gi|700191108|gb|KGN46312.1|9.0e-1655.66hypothetical protein Csa_6G082010 [Cucumis sativus][more]
gi|567872067|ref|XP_006428623.1|3.7e-0947.37hypothetical protein CICLE_v10011241mg [Citrus clementina][more]
gi|659133978|ref|XP_008466977.1|1.1e-0839.09PREDICTED: LOW QUALITY PROTEIN: protein KRI1 homolog, partial [Cucumis melo][more]
gi|641835037|gb|KDO54019.1|1.4e-0846.32hypothetical protein CISIN_1g006196mg [Citrus sinensis][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005829 cytosol
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g07340.1Cp4.1LG05g07340.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g07340CmaCh02G009840Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g07340CmoCh02G009920Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g07340Carg08493Silver-seed gourdcarcpeB1002
The following gene(s) are paralogous to this gene:

None