Cp4.1LG05g06760 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g06760
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG05 : 4099925 .. 4100581 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGGAGAAGGAGACGGAGATGGAGATGGAGATGGAGATGGATGAAGAAATGGAAGAGGTTACTGATCAGCCATTTGATTCGGATGAGATTGATTTCGATTACGAGTTTGATGCCGCCATGTATTACGATTTCACTCGCCCCGAGACAGAGATGGAGATGAGAGGAGCCGAGGATTGGTTTAAATTCGCTGGAACCTATCCACCTTCTCGTAAGCATTTTGTTTTCTTATGGATCATTTGACTCTTCGCGATTTCGATTTTATTGGATATCTGTTACAAATGTTGAAGTTATGGAATTATTCTGTTCTGCGGAATTTGATTTTTGACGACAACGCTTTCTCTTGGAATAGTTTTTAGTGCATTATGGTTTCATGGGAATAAAATCCAATTATTTTGGAGAGTAAATCAAAATCTAATTGGTCTTTCATGTTGATTCTTATGCCATGATTTTTTCTTTCGTCTTTTAGCATTCGTCGTAAAATTGACTGGGGAAAAAGAGGCGCGGGCAGAGTGCACCTCTATTGAACTCAAAGGTGTCCAGAACAACCGGGAGGACCCTGAAAATTCAGGTATAATGTGCATTTCTTCTTTTATTATTCGTTCAGTTGGATTCAACCTCGGCAATATGCTGTGCCAGAAGAGCTATTTTAATAGTTAA

mRNA sequence

AAGGAGAAGGAGACGGAGATGGAGATGGAGATGGAGATGGATGAAGAAATGGAAGAGGTTACTGATCAGCCATTTGATTCGGATGAGATTGATTTCGATTACGAGTTTGATGCCGCCATGTATTACGATTTCACTCGCCCCGAGACAGAGATGGAGATGAGAGGAGCCGAGGATTGGTTTAAATTCGCTGGAACCTATCCACCTTCTCCATTCGTCGTAAAATTGACTGGGGAAAAAGAGGCGCGGGCAGAGTGCACCTCTATTGAACTCAAAGGTGTCCAGAACAACCGGGAGGACCCTGAAAATTCAGTTGGATTCAACCTCGGCAATATGCTGTGCCAGAAGAGCTATTTTAATAGTTAA

Coding sequence (CDS)

AAGGAGAAGGAGACGGAGATGGAGATGGAGATGGAGATGGATGAAGAAATGGAAGAGGTTACTGATCAGCCATTTGATTCGGATGAGATTGATTTCGATTACGAGTTTGATGCCGCCATGTATTACGATTTCACTCGCCCCGAGACAGAGATGGAGATGAGAGGAGCCGAGGATTGGTTTAAATTCGCTGGAACCTATCCACCTTCTCCATTCGTCGTAAAATTGACTGGGGAAAAAGAGGCGCGGGCAGAGTGCACCTCTATTGAACTCAAAGGTGTCCAGAACAACCGGGAGGACCCTGAAAATTCAGTTGGATTCAACCTCGGCAATATGCTGTGCCAGAAGAGCTATTTTAATAGTTAA

Protein sequence

KEKETEMEMEMEMDEEMEEVTDQPFDSDEIDFDYEFDAAMYYDFTRPETEMEMRGAEDWFKFAGTYPPSPFVVKLTGEKEARAECTSIELKGVQNNREDPENSVGFNLGNMLCQKSYFNS
Homology
[Close]
BLAST of Cp4.1LG05g06760 vs. TrEMBL
Match: A0A0A0K5I1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G229900 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.1e-29
Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 1 

Query: 7   MEMEMEMDEEMEEVTDQPFDSDEIDFDYEFDAAMYYDFTRPETEMEMRGAEDWFKFAGTY 66
           ME EME DEEM+EVTD+PF  +EID DYEFD AMYYDFTRPETE E++ AEDWFKFAGTY
Sbjct: 1   MEKEMETDEEMKEVTDKPFVWEEIDLDYEFDVAMYYDFTRPETEKEIKEAEDWFKFAGTY 60

Query: 67  PPSPFVVKLTGEKEARAECTSIELKGVQNNREDPENS 104
           PPSPFV+KL  E+E RAEC S EL  VQN+ +D +NS
Sbjct: 61  PPSPFVLKL-NEEEVRAECNSTELMNVQNHWDDHKNS 96

[Close]
BLAST of Cp4.1LG05g06760 vs. TrEMBL
Match: M5X9B2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019113mg PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.8e-13
Identity = 41/91 (45.05%), Postives = 61/91 (67.03%), Query Frame = 1 

Query: 17  MEEVTDQPFDSDEIDFDYEFDAAMYYDFTRPETEMEMRGAEDWFKFAGTYPPSPFVVKL- 76
           M++   + ++ DEID DYEFDA  +YDFT+P++++E   AEDWF+FAG+YPPSPF++KL 
Sbjct: 1   MQDFMREAYEGDEIDLDYEFDAPKFYDFTQPDSDLEATEAEDWFRFAGSYPPSPFIIKLL 60

Query: 77  -TGEKEARAE--CTSIELKGVQNNREDPENS 104
              +K+   E    S E K V+  R+   N+
Sbjct: 61  MNWQKDIPVEPVKVSAESKDVEGIRDSDSNN 91

[Close]
BLAST of Cp4.1LG05g06760 vs. TrEMBL
Match: B9RBW2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1681670 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-12
Identity = 51/111 (45.95%), Postives = 67/111 (60.36%), Query Frame = 1 

Query: 7   MEMEMEMDEEMEEVTDQPFDSDEIDFDYEFDAAMYYDFTRPETEMEMRGAEDWFKFAGTY 66
           MEMEME DEEME   +  F++ E+D DYEFDAAM++DFTR E+  E   AE WF  A +Y
Sbjct: 1   MEMEME-DEEME--VELVFEAREVDLDYEFDAAMFFDFTRQESLAEAHEAERWFDTAQSY 60

Query: 67  PPSPFVVKLTGEKEARAECTSIELKGVQNNREDPENSVGFNLGNMLCQKSY 118
           PPSPFV KL   +E      + E +G   + E PE      + N  C+++Y
Sbjct: 61  PPSPFVAKLALREENTETLITEECRGGLLDTEAPE----IEVENQECERTY 104

[Close]
BLAST of Cp4.1LG05g06760 vs. TrEMBL
Match: A0A067JRU9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20724 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.5e-12
Identity = 44/81 (54.32%), Postives = 57/81 (70.37%), Query Frame = 1 

Query: 4  ETEMEMEMEMDEEMEEVTDQPFDSDEIDFDYEFDAAMYYDFTRPETEMEMRGAEDWFKFA 63
          E EMEMEMEM+EE+E      F++ EID DYEFDAAM++DFTR E+  + R AE WF+ A
Sbjct: 2  EMEMEMEMEMEEEIE--MQFVFEAREIDIDYEFDAAMFFDFTREESAADARQAERWFETA 61

Query: 64 GTYPPSPFVVKLTGEKEARAE 85
           +YPPSPFV K    +++  E
Sbjct: 62 QSYPPSPFVAKFVLREDSLLE 80

[Close]
BLAST of Cp4.1LG05g06760 vs. TrEMBL
Match: W9RYK0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023171 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.7e-11
Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 1 

Query: 9  MEMEMDEEMEEVTDQPFDSDEIDFDYEFDAAMYYDFTRPETEMEMRGAEDWFKFAGTYPP 68
          MEME D E+E V    F++ EID +YEF+AA Y+DFTR ET +E R AE+WF+ A +YPP
Sbjct: 1  MEMEEDMEVEPV----FEAHEIDLEYEFEAARYFDFTREETPVEAREAENWFESANSYPP 60

Query: 69 SPFVVKLTGEKEARAECTSIELKGVQNNR 98
          SPF  KL   ++   E  +I  K  + N+
Sbjct: 61 SPFATKLVLGEDILLENVNISPKAERENQ 85

[Close]
BLAST of Cp4.1LG05g06760 vs. TAIR10
Match: AT4G22860.1 (AT4G22860.1 Cell cycle regulated microtubule associated protein)

HSP 1 Score: 68.2 bits (165), Expect = 4.0e-12
Identity = 38/70 (54.29%), Postives = 46/70 (65.71%), Query Frame = 1 

Query: 11 MEMDEEMEEVTDQPFDSDEIDFDYEFDAAMYYDFTRPETEMEMRGAEDWFKFAGTYPPSP 70
          MEMDE+ME +    F+  EID +YEFDAA +YDFTR E   E + AE WF  A +Y PSP
Sbjct: 1  MEMDEDME-IEPMVFEVKEIDLEYEFDAARWYDFTREELPEESQAAEFWFHSAPSYAPSP 60

Query: 71 FVVKLTGEKE 81
          FV KL   +E
Sbjct: 61 FVTKLLLREE 69

[Close]
BLAST of Cp4.1LG05g06760 vs. TAIR10
Match: AT4G11990.1 (AT4G11990.1 Cell cycle regulated microtubule associated protein)

HSP 1 Score: 67.4 bits (163), Expect = 6.9e-12
Identity = 45/118 (38.14%), Postives = 67/118 (56.78%), Query Frame = 1 

Query: 2   EKETEMEMEMEMDEEMEEVTDQPFDSDEIDFDYEFDAAMYYDFTRPETEMEMRGAEDWFK 61
           E ET+ E E + D EME +    F+  EID +YEFDA+ ++DFTR E  +E R AE WF+
Sbjct: 2   EMETDTETESDEDMEMETMV---FEVTEIDLEYEFDASRWFDFTREELPLESRAAELWFE 61

Query: 62  FAGTYPPSPFVVKL---------TGEKEARAECTSIELKGVQNNREDPENSVGFNLGN 111
            A +YPPSPF +KL           E  +++E   + ++  +++RE P+       GN
Sbjct: 62  TAQSYPPSPFAMKLLMIEEVYDEKTESLSKSEDGEVTVEVQESDREIPQQPDVNETGN 116

[Close]
BLAST of Cp4.1LG05g06760 vs. TAIR10
Match: AT5G07170.1 (AT5G07170.1 Cell cycle regulated microtubule associated protein)

HSP 1 Score: 60.8 bits (146), Expect = 6.4e-10
Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 1 

Query: 13 MDEEMEEVTDQPFDSD-EIDFDYEFDAAMYYDFTRPETEMEMRGAEDWFKFAGTYPPSPF 72
          MD   E+ + + FD D E D D+EFDA  +YDF++PE + E    E WF+ AG YPPSPF
Sbjct: 17 MDIFAEDFSLEKFDIDFEFDIDFEFDAPRFYDFSKPELDSETEETELWFQSAGNYPPSPF 76

Query: 73 VVKLTGEKE 81
           + L  E++
Sbjct: 77 SIHLRYEEK 85

[Close]
BLAST of Cp4.1LG05g06760 vs. NCBI nr
Match: gi|778725796|ref|XP_011659005.1| (PREDICTED: protein TPX2-like isoform X2 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 4.5e-29
Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 1 

Query: 7   MEMEMEMDEEMEEVTDQPFDSDEIDFDYEFDAAMYYDFTRPETEMEMRGAEDWFKFAGTY 66
           ME EME DEEM+EVTD+PF  +EID DYEFD AMYYDFTRPETE E++ AEDWFKFAGTY
Sbjct: 1   MEKEMETDEEMKEVTDKPFVWEEIDLDYEFDVAMYYDFTRPETEKEIKEAEDWFKFAGTY 60

Query: 67  PPSPFVVKLTGEKEARAECTSIELKGVQNNREDPENS 104
           PPSPFV+KL  E+E RAEC S EL  VQN+ +D +NS
Sbjct: 61  PPSPFVLKL-NEEEVRAECNSTELMNVQNHWDDHKNS 96

[Close]
BLAST of Cp4.1LG05g06760 vs. NCBI nr
Match: gi|700188981|gb|KGN44214.1| (hypothetical protein Csa_7G229900 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 4.5e-29
Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 1 

Query: 7   MEMEMEMDEEMEEVTDQPFDSDEIDFDYEFDAAMYYDFTRPETEMEMRGAEDWFKFAGTY 66
           ME EME DEEM+EVTD+PF  +EID DYEFD AMYYDFTRPETE E++ AEDWFKFAGTY
Sbjct: 1   MEKEMETDEEMKEVTDKPFVWEEIDLDYEFDVAMYYDFTRPETEKEIKEAEDWFKFAGTY 60

Query: 67  PPSPFVVKLTGEKEARAECTSIELKGVQNNREDPENS 104
           PPSPFV+KL  E+E RAEC S EL  VQN+ +D +NS
Sbjct: 61  PPSPFVLKL-NEEEVRAECNSTELMNVQNHWDDHKNS 96

[Close]
BLAST of Cp4.1LG05g06760 vs. NCBI nr
Match: gi|778725790|ref|XP_011659002.1| (PREDICTED: protein TPX2-like isoform X1 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 4.5e-29
Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 1 

Query: 7   MEMEMEMDEEMEEVTDQPFDSDEIDFDYEFDAAMYYDFTRPETEMEMRGAEDWFKFAGTY 66
           ME EME DEEM+EVTD+PF  +EID DYEFD AMYYDFTRPETE E++ AEDWFKFAGTY
Sbjct: 1   MEKEMETDEEMKEVTDKPFVWEEIDLDYEFDVAMYYDFTRPETEKEIKEAEDWFKFAGTY 60

Query: 67  PPSPFVVKLTGEKEARAECTSIELKGVQNNREDPENS 104
           PPSPFV+KL  E+E RAEC S EL  VQN+ +D +NS
Sbjct: 61  PPSPFVLKL-NEEEVRAECNSTELMNVQNHWDDHKNS 96

[Close]
BLAST of Cp4.1LG05g06760 vs. NCBI nr
Match: gi|645257597|ref|XP_008234482.1| (PREDICTED: uncharacterized protein LOC103333434 [Prunus mume])

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-14
Identity = 46/95 (48.42%), Postives = 63/95 (66.32%), Query Frame = 1 

Query: 13  MDEEMEEVTDQPFDSDEIDFDYEFDAAMYYDFTRPETEMEMRGAEDWFKFAGTYPPSPFV 72
           MDEEM+    + +  DEID DYEFDA  +YDFT+P++++E   AEDWF+FAG+YPPSPF+
Sbjct: 1   MDEEMQNFMREAYKGDEIDLDYEFDAPKFYDFTQPDSDLEDTEAEDWFRFAGSYPPSPFI 60

Query: 73  VKL--TGEKEARAE--CTSIELKGVQNNREDPENS 104
           +KL    +K+   E    S E K VQ  R+   N+
Sbjct: 61  IKLLMNWQKDIPVEPVKVSAESKDVQGIRDSDSNN 95

[Close]
BLAST of Cp4.1LG05g06760 vs. NCBI nr
Match: gi|657944773|ref|XP_008376426.1| (PREDICTED: protein TPX2 [Malus domestica])

HSP 1 Score: 84.0 bits (206), Expect = 2.0e-13
Identity = 50/97 (51.55%), Postives = 62/97 (63.92%), Query Frame = 1 

Query: 10  EMEMDEEMEEVTDQPFDSDEIDFDYEFDAAMYYDFTRPETEMEMRGAEDWFKFAGTYPPS 69
           E EMDEEM E   + F+ DEID DYEFDA  +YDFTRPE++ E   AE+WF+ AG Y PS
Sbjct: 5   EREMDEEMVEFAREAFEGDEIDMDYEFDAPKFYDFTRPESDWEAEEAEEWFRSAGGYQPS 64

Query: 70  PFVVKLTG-EKEARAE--CTSIELKGVQNNR-EDPEN 103
           PF+ KL   +KE   E   T +E K V+  R  +P N
Sbjct: 65  PFLEKLLNWQKENHPEPVKTFVESKDVEVTRCSNPNN 101

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g06760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG05g06760 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5I1_CUCSA3.1e-2972.16Uncharacterized protein OS=Cucumis sativus GN=Csa_7G229900 PE=4 SV=1[more]
M5X9B2_PRUPE1.8e-1345.05Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019113mg PE=4 S... [more]
B9RBW2_RICCO1.2e-1245.95Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1681670 PE=4 SV=1[more]
A0A067JRU9_JATCU4.5e-1254.32Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20724 PE=4 SV=1[more]
W9RYK0_9ROSA1.7e-1148.31Uncharacterized protein OS=Morus notabilis GN=L484_023171 PE=4 SV=1[more]
BLAST of Cp4.1LG05g06760 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G22860.14.0e-1254.29 Cell cycle regulated microtubule associated protein[more]
AT4G11990.16.9e-1238.14 Cell cycle regulated microtubule associated protein[more]
AT5G07170.16.4e-1046.38 Cell cycle regulated microtubule associated protein[more]
BLAST of Cp4.1LG05g06760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778725796|ref|XP_011659005.1|4.5e-2972.16PREDICTED: protein TPX2-like isoform X2 [Cucumis sativus][more]
gi|700188981|gb|KGN44214.1|4.5e-2972.16hypothetical protein Csa_7G229900 [Cucumis sativus][more]
gi|778725790|ref|XP_011659002.1|4.5e-2972.16PREDICTED: protein TPX2-like isoform X1 [Cucumis sativus][more]
gi|645257597|ref|XP_008234482.1|1.4e-1448.42PREDICTED: uncharacterized protein LOC103333434 [Prunus mume][more]
gi|657944773|ref|XP_008376426.1|2.0e-1351.55PREDICTED: protein TPX2 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0060236regulation of mitotic spindle organization
GO:0032147activation of protein kinase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005874microtubule
GO:0005819spindle
Vocabulary: INTERPRO
TermDefinition
IPR009675TPX2_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032147 activation of protein kinase activity
biological_process GO:0007067 mitotic nuclear division
biological_process GO:0060236 regulation of mitotic spindle organization
cellular_component GO:0005874 microtubule
cellular_component GO:0005819 spindle
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g06760.1Cp4.1LG05g06760.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009675TPX2PANTHERPTHR14326TARGETING PROTEIN FOR XKLP2coord: 5..80
score: 5.9
NoneNo IPR availablePANTHERPTHR14326:SF15CELL CYCLE REGULATED MICROTUBULE ASSOCIATED PROTEINcoord: 5..80
score: 5.9

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g06760Cucurbita pepo (Zucchini)cpecpeB057
Cp4.1LG05g06760Cucurbita pepo (Zucchini)cpecpeB245
Cp4.1LG05g06760Cucurbita maxima (Rimu)cmacpeB358
Cp4.1LG05g06760Cucurbita maxima (Rimu)cmacpeB453
Cp4.1LG05g06760Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g06760Cucurbita moschata (Rifu)cmocpeB322
Cp4.1LG05g06760Cucurbita moschata (Rifu)cmocpeB414
Cp4.1LG05g06760Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g06760Wild cucumber (PI 183967)cpecpiB725
Cp4.1LG05g06760Cucumber (Chinese Long) v2cpecuB725
Cp4.1LG05g06760Watermelon (Charleston Gray)cpewcgB678
Cp4.1LG05g06760Watermelon (97103) v1cpewmB705
Cp4.1LG05g06760Melon (DHL92) v3.5.1cpemeB701
Cp4.1LG05g06760Melon (DHL92) v3.6.1cpemedB835
Cp4.1LG05g06760Silver-seed gourdcarcpeB1002
Cp4.1LG05g06760Cucumber (Chinese Long) v3cpecucB0903
Cp4.1LG05g06760Wax gourdcpewgoB0925