Cp4.1LG05g06250 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTGATGGAGTGTTTCAATTCAGGGATGGAGCTTGAAGAGGTGAGGAGGGATTTGGAGTATCTAGCTGAAAAGCAACAACAAAGGGTGCGTTACTACGAGAGTAGAGCCATTTACACAACTCTGGGCTACCTGGCCTGGCTGCGCTTCTTCTACTCTGCTGTCTCCTCTAATTCCTCCTCTACCCTCCACTGTGTTCATTGGGCAATGGTTTTGGGTTTGAGTCTTTCCTCTTCATCCCTTTATTTCTTGATTTTACTGCCGCCTTTCATCAAATTGTACCGGACTCACAACCTGCTCCACACAATTTGCAACCGACATACTCATCTCTGTCAACGGATTTTGGAGTCCACCAACCAAGATGGTGAGGCTGGAGCATCCACCGATGGGGTCGAGTTCAATGTCAGGTTCCACCAGGTCAGGGCGCTTCACAATGATTCATTCAGTGGTGGGGAGATCAAAGTCTACACATGCTCTGTTTGCTGTTACCGCTTTTCAACTCTATGCCTGTAAGTATGTGGTGTGCAACTGAAATTGCACATCCTTTGCCGCCTTACTATATATTTTTAAGAGTGTTGTAGCTTTAAATTCTTCATTCTCGAGATTATGTATTTTGATCTTATAATCAGTTGTGATGGGCTGCTTGTGTTTCTGCTTCTTACTTAATATGTTGGGAGCTAAAAATAGGCAGACATGTACGCATTGCACGGAGCTCTTTCCCTTTCTTCTCTTCTTGCTCTTAATAATTGTACTTTGAGTTCAAAGATTTGTGCTGTATGAAGTAGTGTGTGTTTCCCCTAGCTTGTTTCTGCCTTTTTGTTCATCTATATTCATTTCTTACAAGAGTTGAGTGTAAGCTACAGAAAAATAAATTTGGACTCAGCTATGCTAGTTAGTTGCAAAAGAATTCAATATCGATGTGGGAAAAGTGTAAAACAACCTTTATCAAAGCAAGCTAACACCAAGTTTTGAAATAACATCCATTATCTTCTCCAAATTTTAGAGTAGCTTAGACATTGCAAAAACCAATCAAAAGGAAGCAATTAAATTATTTGATGAAATAGATTTTAGTCTTCATGTTAGCTGAGTTATCCTAATTTTGCTCCTAACAATATCATCACAACTGCTAACAACATCATGTCCAAAATAGTACATCTGTGTGCTCTGTCCTGCATTTCATAATACACACAATCCTTTGTAAGAAAGATAGTACTTAAGAAGCATGGACACTTTAGTTCAGCTAACGTGTCCAGCGTTCCACACTTGGACACTTGTTGGACATGAGCAGATACTTGTTAACTCAATAGATATATGTTAAAAAGTTACTAGCTGCACGAAGTCAATATGGGTCCAACATTTGTTAGAGACGTATCGATCACTTGTTAGCTTATACGTAACTCATAATTCCAACTTTGCTACGAGAAGGTTAGCCATATGTATGTCAATTGCAGTAATTGCATAAAATACATCGGTAGAAATACGTGCCATAATATATTTGGTAGACTCGAACTAGTTTGGAATAAGGAACTCTGTCCCATTATCTATTTGTGTGAATCAAGTAGTTGGAAGTATGAAATATGATATTAATGAAGTATCAGCTCACTAAGTGTTTGCATCAAGTGTTTGCATCCTGAATGGTATAGACATTCAATTTATATGTGGGGTAGTTTGTTTGCATCTTTTCCTATCAAACTCATTTTTAAGTTTCTCTTTTGAGTTGAAGACAACTCCTAAATCTTTAATTGCTTTGAGCATATTATCAACATATAGGAAGAGACATAAATAATGGAATGTGATTAAGTTTATAAATTGTGTCATTGTTAGTGCTACTTTGTTCTTCTCCCATCTACTTATATTCTTGCTTCATGGCTTGCTTCCTCACTCGGCTCATTCATCTAGTTAACTTGTACTCTCCCCAACTAGTTAACTTGTACTCTCCCCAACTAGTTAACTTGTACATGCTCTGGGTACTTTGTTAGATACGACGACTCTCTACAATGTTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTTGGTTTCTCCAAAAGGCCTCCTACCAATGGAGATAGTATTCCTTGCTTATAAACTCATGATCAACCCAGACTCCTCTCCCAACAATCCTTAGTATATTCCTCCCCTTAACTCTCTTTCTTTGGTCACATGAATAACTAGTGGCCTATCAGTTGAGATGGGTTCAAGTTAAAGGAAAATTTCCAAATTTTGCGGGGAGGATACTTCATTAACTTCCAAATAGTTAGTTGATCGAAAATTTGCAACCTGTTTTCTCTTGCTGGCTTTAATGGCTTCAATGAAATCTTTGTGTTTAATTTGGTTTAGCTGGGTTTTGTTGCCTTAAATCCTATACTTCAATTTGGAACTTCAAAATGTTAGTGTTTGCATGACATTGAACATTGGAAAATAGAAATTAGAGAGCATATCATATCATATCATCTGATTTTGTGAACTCGGCATTTATTACAGGACAAAGGCATTTTGTGAATTATGGAATAAAGTTCAAAAGCCATATGATAAAGGAGGTTTAGAGGATGCTAAGGAGCTCATGCCATAGTTGTTGCTGTTGGCTGTAAGTTGAAGTTGGATAGTGTGTCCCTCTGCAGGTATGAAGGTTTTGTAAGTTTCAGTATTTCTTTGTCTTCTAAATTCTTATATAAAGTAAAGGAAATGAAGCCTGATTGAATGAATACAAGCTACTATCATGCATGTTCTACTTACTCATAATCTCTGAGATTATGTTCAAGCTTTGTGATTTAGTGAGGTTTTCTTGGTTTTCTACTCGGTTTGATGGATTTCTTCGGTCCAGTTGGGCGGCTGTGAAATACCCATTTCTTAGTAACTTCCCATTGAATTGTGTTTTGGATTGGTATGGTTGATAATAGATGGCTTTGTAAATATTTTAATTTTCAATTTATTTGCCAACCAATCCGAATGTACAACTTTTGAGTTAAAGCACTCATATTATAAAAGTATTATATAAAAAATTATGTAACACAAAATTCAACCTCATATTAAATTAATTATTTTTAAAAAA AATTGATGGAGTGTTTCAATTCAGGGATGGAGCTTGAAGAGGTGAGGAGGGATTTGGAGTATCTAGCTGAAAAGCAACAACAAAGGGTGCGTTACTACGAGAGTAGAGCCATTTACACAACTCTGGGCTACCTGGCCTGGCTGCGCTTCTTCTACTCTGCTGTCTCCTCTAATTCCTCCTCTACCCTCCACTGTGTTCATTGGGCAATGGTTTTGGGTTTGAGTCTTTCCTCTTCATCCCTTTATTTCTTGATTTTACTGCCGCCTTTCATCAAATTGTACCGGACTCACAACCTGCTCCACACAATTTGCAACCGACATACTCATCTCTGTCAACGGATTTTGGAGTCCACCAACCAAGATGGTGAGGCTGGAGCATCCACCGATGGGGTCGAGTTCAATGTCAGGTTCCACCAGGTCAGGGCGCTTCACAATGATTCATTCAGTGGTGGGGAGATCAAAGTCTACACATGCTCTGTTTGCTGTTACCGCTTTTCAACTCTATGCCTGACAAAGGCATTTTGTGAATTATGGAATAAAGTTCAAAAGCCATATGATAAAGGAGGTTTAGAGGATGCTAAGGAGCTCATGCCATAGTTGTTGCTGTTGGCTGTAAGTTGAAGTTGGATAGTGTGTCCCTCTGCAGGTATGAAGGTTTTGTAAGTTTCAGTATTTCTTTGTCTTCTAAATTCTTATATAAAGTAAAGGAAATGAAGCCTGATTGAATGAATACAAGCTACTATCATGCATGTTCTACTTACTCATAATCTCTGAGATTATGTTCAAGCTTTGTGATTTAGTGAGGTTTTCTTGGTTTTCTACTCGGTTTGATGGATTTCTTCGGTCCAGTTGGGCGGCTGTGAAATACCCATTTCTTAGTAACTTCCCATTGAATTGTGTTTTGGATTGGTATGGTTGATAATAGATGGCTTTGTAAATATTTTAATTTTCAATTTATTTGCCAACCAATCCGAATGTACAACTTTTGAGTTAAAGCACTCATATTATAAAAGTATTATATAAAAAATTATGTAACACAAAATTCAACCTCATATTAAATTAATTATTTTTAAAAAA ATGGAGTGTTTCAATTCAGGGATGGAGCTTGAAGAGGTGAGGAGGGATTTGGAGTATCTAGCTGAAAAGCAACAACAAAGGGTGCGTTACTACGAGAGTAGAGCCATTTACACAACTCTGGGCTACCTGGCCTGGCTGCGCTTCTTCTACTCTGCTGTCTCCTCTAATTCCTCCTCTACCCTCCACTGTGTTCATTGGGCAATGGTTTTGGGTTTGAGTCTTTCCTCTTCATCCCTTTATTTCTTGATTTTACTGCCGCCTTTCATCAAATTGTACCGGACTCACAACCTGCTCCACACAATTTGCAACCGACATACTCATCTCTGTCAACGGATTTTGGAGTCCACCAACCAAGATGGTGAGGCTGGAGCATCCACCGATGGGGTCGAGTTCAATGTCAGGTTCCACCAGGTCAGGGCGCTTCACAATGATTCATTCAGTGGTGGGGAGATCAAAGTCTACACATGCTCTGTTTGCTGTTACCGCTTTTCAACTCTATGCCTGACAAAGGCATTTTGTGAATTATGGAATAAAGTTCAAAAGCCATATGATAAAGGAGGTTTAGAGGATGCTAAGGAGCTCATGCCATAG MECFNSGMELEEVRRDLEYLAEKQQQRVRYYESRAIYTTLGYLAWLRFFYSAVSSNSSSTLHCVHWAMVLGLSLSSSSLYFLILLPPFIKLYRTHNLLHTICNRHTHLCQRILESTNQDGEAGASTDGVEFNVRFHQVRALHNDSFSGGEIKVYTCSVCCYRFSTLCLTKAFCELWNKVQKPYDKGGLEDAKELMP
BLAST of Cp4.1LG05g06250 vs. TrEMBL
Match: E5GBE1_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.6e-11 Identity = 68/174 (39.08%), Postives = 92/174 (52.87%), Query Frame = 1
BLAST of Cp4.1LG05g06250 vs. TrEMBL
Match: A0A0A0KM15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139820 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 8.1e-11 Identity = 64/160 (40.00%), Postives = 87/160 (54.37%), Query Frame = 1
BLAST of Cp4.1LG05g06250 vs. TrEMBL
Match: A0A0A0KUT0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G562290 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.6e-06 Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = 1
BLAST of Cp4.1LG05g06250 vs. TrEMBL
Match: A0A0A0KND2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139800 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 7.9e-06 Identity = 43/141 (30.50%), Postives = 73/141 (51.77%), Query Frame = 1
BLAST of Cp4.1LG05g06250 vs. NCBI nr
Match: gi|659074338|ref|XP_008437550.1| (PREDICTED: uncharacterized protein LOC103482931 isoform X1 [Cucumis melo]) HSP 1 Score: 77.8 bits (190), Expect = 2.4e-11 Identity = 68/174 (39.08%), Postives = 92/174 (52.87%), Query Frame = 1
BLAST of Cp4.1LG05g06250 vs. NCBI nr
Match: gi|307135919|gb|ADN33782.1| (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 77.8 bits (190), Expect = 2.4e-11 Identity = 68/174 (39.08%), Postives = 92/174 (52.87%), Query Frame = 1
BLAST of Cp4.1LG05g06250 vs. NCBI nr
Match: gi|700194727|gb|KGN49904.1| (hypothetical protein Csa_5G139820 [Cucumis sativus]) HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10 Identity = 64/160 (40.00%), Postives = 87/160 (54.37%), Query Frame = 1
BLAST of Cp4.1LG05g06250 vs. NCBI nr
Match: gi|659074340|ref|XP_008437551.1| (PREDICTED: uncharacterized protein LOC103482931 isoform X2 [Cucumis melo]) HSP 1 Score: 72.0 bits (175), Expect = 1.3e-09 Identity = 54/123 (43.90%), Postives = 72/123 (58.54%), Query Frame = 1
BLAST of Cp4.1LG05g06250 vs. NCBI nr
Match: gi|778698994|ref|XP_011654636.1| (PREDICTED: uncharacterized protein LOC105435427 [Cucumis sativus]) HSP 1 Score: 71.6 bits (174), Expect = 1.7e-09 Identity = 54/126 (42.86%), Postives = 72/126 (57.14%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |