Cp4.1LG05g05890 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GATGAGCGAAATCTGTCTTTGCATGCAGTCCTTGCAGTTGCAAAAGGGCACCACATGCTCCTCAGTTAGCCTCCAAAAACAGAAATGTAATATCAAGCTTTATGCGGTACCTGTTAGAGCCTTTTCTTGTCGATTTGCGTCGACTGGTTCTGCTTCTAGTAGAGCTGATTTGGGCAGTCAGAGGAAACATATTGCTTCTGCCTTCACTGTTCCAAATGGGTATCAGAGGTTAGGACCAAATTTAGTAATTTCATTATTGTCTTTGAGAAATGCTGTCAAGAGTTGTGTCTGTCTTTCAGATAAGATATTGAATGATTGCTTTATAGTAGGGCTGGTCACATGCACTACCGTACTGATGGGAACAGCACGAGTGAATTTGAGGGTCAGTTGGACGAATTATTCAACGAAGTCAGAATGCTGATTGTTAGCGGAAGGAAGAATGATGCTGTTGAGCTACTTCAAGCAAATTATGAAGCTGTAAAAGAACAGATGGAATCAGGTGCTAGTGGCATTGAACAAGCTGCTGTTCTTGACATCGTGGCTTTGGGGTATATAACTGTTGGAGACTTGAAGTTTGTTGCTTCTATACTGGAT GATGAGCGAAATCTGTCTTTGCATGCAGTCCTTGCAGTTGCAAAAGGGCACCACATGCTCCTCAGTTAGCCTCCAAAAACAGAAATGTAATATCAAGCTTTATGCGGTACCTGTTAGAGCCTTTTCTTGTCGATTTGCGTCGACTGGTTCTGCTTCTAGTAGAGCTGATTTGGGCAGTCAGAGGAAACATATTGCTTCTGCCTTCACTGTTCCAAATGGGTATCAGAGTAGGGCTGGTCACATGCACTACCGTACTGATGGGAACAGCACGAGTGAATTTGAGGGTCAGTTGGACGAATTATTCAACGAAGTCAGAATGCTGATTGTTAGCGGAAGGAAGAATGATGCTGTTGAGCTACTTCAAGCAAATTATGAAGCTGTAAAAGAACAGATGGAATCAGGTGCTAGTGGCATTGAACAAGCTGCTGTTCTTGACATCGTGGCTTTGGGGTATATAACTGTTGGAGACTTGAAGTTTGTTGCTTCTATACTGGAT ATGAGCGAAATCTGTCTTTGCATGCAGTCCTTGCAGTTGCAAAAGGGCACCACATGCTCCTCAGTTAGCCTCCAAAAACAGAAATGTAATATCAAGCTTTATGCGGTACCTGTTAGAGCCTTTTCTTGTCGATTTGCGTCGACTGGTTCTGCTTCTAGTAGAGCTGATTTGGGCAGTCAGAGGAAACATATTGCTTCTGCCTTCACTGTTCCAAATGGGTATCAGAGTAGGGCTGGTCACATGCACTACCGTACTGATGGGAACAGCACGAGTGAATTTGAGGGTCAGTTGGACGAATTATTCAACGAAGTCAGAATGCTGATTGTTAGCGGAAGGAAGAATGATGCTGTTGAGCTACTTCAAGCAAATTATGAAGCTGTAAAAGAACAGATGGAATCAGGTGCTAGTGGCATTGAACAAGCTGCTGTTCTTGACATCGTGGCTTTGGGGTATATAACTGTTGGAGACTTGAAGTTTGTTGCTTCTATACTGGAT MSEICLCMQSLQLQKGTTCSSVSLQKQKCNIKLYAVPVRAFSCRFASTGSASSRADLGSQRKHIASAFTVPNGYQSRAGHMHYRTDGNSTSEFEGQLDELFNEVRMLIVSGRKNDAVELLQANYEAVKEQMESGASGIEQAAVLDIVALGYITVGDLKFVASILD
BLAST of Cp4.1LG05g05890 vs. TrEMBL
Match: A0A0A0KQ54_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139340 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 6.8e-43 Identity = 105/146 (71.92%), Postives = 118/146 (80.82%), Query Frame = 1
BLAST of Cp4.1LG05g05890 vs. TrEMBL
Match: A0A067DKK5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008016mg PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.2e-31 Identity = 82/170 (48.24%), Postives = 112/170 (65.88%), Query Frame = 1
BLAST of Cp4.1LG05g05890 vs. TrEMBL
Match: A0A067DWJ4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008016mg PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.2e-31 Identity = 82/170 (48.24%), Postives = 112/170 (65.88%), Query Frame = 1
BLAST of Cp4.1LG05g05890 vs. TrEMBL
Match: A0A067DXQ4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008016mg PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.2e-31 Identity = 82/170 (48.24%), Postives = 112/170 (65.88%), Query Frame = 1
BLAST of Cp4.1LG05g05890 vs. TrEMBL
Match: B9IDN7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s01320g PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.3e-27 Identity = 76/164 (46.34%), Postives = 106/164 (64.63%), Query Frame = 1
BLAST of Cp4.1LG05g05890 vs. TAIR10
Match: AT5G53080.1 (AT5G53080.1 Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 99.8 bits (247), Expect = 1.7e-21 Identity = 66/160 (41.25%), Postives = 92/160 (57.50%), Query Frame = 1
BLAST of Cp4.1LG05g05890 vs. NCBI nr
Match: gi|659074456|ref|XP_008437615.1| (PREDICTED: nephrocystin-3 [Cucumis melo]) HSP 1 Score: 208.8 bits (530), Expect = 7.4e-51 Identity = 114/161 (70.81%), Postives = 128/161 (79.50%), Query Frame = 1
BLAST of Cp4.1LG05g05890 vs. NCBI nr
Match: gi|778698841|ref|XP_011654607.1| (PREDICTED: nephrocystin-3 isoform X1 [Cucumis sativus]) HSP 1 Score: 208.0 bits (528), Expect = 1.3e-50 Identity = 118/161 (73.29%), Postives = 133/161 (82.61%), Query Frame = 1
BLAST of Cp4.1LG05g05890 vs. NCBI nr
Match: gi|700194679|gb|KGN49856.1| (hypothetical protein Csa_5G139340 [Cucumis sativus]) HSP 1 Score: 181.8 bits (460), Expect = 9.7e-43 Identity = 105/146 (71.92%), Postives = 118/146 (80.82%), Query Frame = 1
BLAST of Cp4.1LG05g05890 vs. NCBI nr
Match: gi|641824038|gb|KDO43397.1| (hypothetical protein CISIN_1g008016mg [Citrus sinensis]) HSP 1 Score: 144.4 bits (363), Expect = 1.7e-31 Identity = 82/170 (48.24%), Postives = 112/170 (65.88%), Query Frame = 1
BLAST of Cp4.1LG05g05890 vs. NCBI nr
Match: gi|641824039|gb|KDO43398.1| (hypothetical protein CISIN_1g008016mg [Citrus sinensis]) HSP 1 Score: 144.4 bits (363), Expect = 1.7e-31 Identity = 82/170 (48.24%), Postives = 112/170 (65.88%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |