Cp4.1LG05g05730 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g05730
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
LocationCp4.1LG05 : 3479720 .. 3483532 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATACATACATACATGTATAAATATATAATATTAAATTAGGGCAGGCTTGGGATTCTAAAGCTGAATAAGAACAAAAGTAATACATATTTGTTATCCATCCACCGCTCTCTGGATCCGGCTCGAAGCCTCAATTTTCTGCGAAACTGAACTGTCGCCGGACGATAGAGGAGGCAACGGAGAAGAAATTAAGGCTCCAATTGGCTTATCATTGATGGAGCAGGGGAAGCAGGGAGTGGTTGTTAAATTGAGCCCTCCACAGAACCCATTGGAGCAGGTTCAGGCTCGTTTCAAGGAACTTGAAAATGGGTTCAGAACATGGTTGGCCAAGCAGTCTCTTCCCGTTGAGGCCGCTGTTGTCACCGCCACCAGCGCTGCACAGGGCGCTGCTATTGGTGGCTTTATGGGCGTTCTCACCAACGACGTTTCTTCGTCTCTGCCCACTCCTCAAGCCGGCCTCAACCCTCAAGCCATGGCCTCTTTCAAGCAGGCTCAGGTCCTATTTTGGTTCCCCCTATTCGTTGTTTGATTTTATAATTTTTTTTCCTGATTGAAATGTGAAAACTGTCTTATTTGTTGAAATTCTGTAGTTTTATGAACAAAAGTGGAATTTGGGGGAGCTGATTCTTGTAGTTTTCTTATGAATTGTAGGCTCTTGCTGGAGGTCCCTTGGTGCAAGCTCGCAACTTCGCCGTGATGACCGGTGTTAATGCAGGCATATCTTCTGTTATGAAGAGATTGAGAGGCAAGGAGGATGTTCAGTCAAGGTAAGCTTTTACGAAGGCTCGGCCGTTTCCTTTTCCTTGTTGATTATTTTCCGTGAGATCATACATCGATTGGGGAGGAGAACGAAACATTCTTTGTAATGGTGTGGAAACCTCTTTTTAGCATATGCGTTATAAAAACTTGTGGGGAAGCCCAGAAAGGAAAGCCCAAAGAGAACAATATCTCTAGCGGTGAGCTTGGGCTGTTACAAATGGTATTAGAGCCAACCGGGCGATGTACCCGTGAGGAGGCTAAGCCCCAAAGGGGTTGACACGAGGAGGTATGCTAGCAAGGACACTGGGTCCCCGAAGGGGGTGGATTGGGGGGTCTCACATCGATTTGAGAAGAGAACGAGTGCCAACGAAGACTCTGGGTCCTAAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTTTTTTAAGGGTGTGGAAACCTCTCCCTATTAAATGCGTTTTAAAAACCTTGAGGGGAAGCCCAAAGAGAACAATATCTCTAGCGGTGAGCTTGGGCTGTTAGAAATGATATTAGAGTCATACACGGGATGATGTACTAGCAAGGAGGTTGAGCTCCAAAGGGGGTGGATTAGGGTGCCCTACATTGATTGGAGAAGGGAATGAGTGCTGGTGAGAATGTTGGGCCCTGAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATATGGGTGTGGAAACCTCTCCCTAGCAGATACGTTTTAAAAACCTTGAAGGGAAACCCAAAAGGGAAAGCCCAAAGAGAACAATATCTACTAGCGTTGAGCTTGGGCTGTTATAAGTGATATTAGAGCTAGACATTGGACGAGAAAGGGGGTGGACACGAGGCGGTGTGCTAGCAAGGACGCCGGCTCCGAATGGGGTGGATTGGGACTAGTAGATTTCAACTCATTTTCTTTGCGTTAAAGATTCAGATTTGAGTTAGAAGTTGGGAGGTTGATGAGAGATTTCATTTGAGAATGGGTTGATAAGGAGGGAGAGGTTCATTTGGTGAGTTGATTATGGTTTCTAGACCCTTGGATCTTAAGGGTTTTTAAAATCTTAATAGTGTGTTTGAAGGCTTGGATCGTGTTGTTTGGGATTATTGGTGTAACGACCTATGCCCAGGATTTGGAATTTGGGCACTTGATAGCTTCGACATTCCCTTGCATCCCCTGCGACGTGGTCATGTTAATTCTCGCTTCTAAGAGTGGTCCCTATAGACCAACATGAGTCCTTCCAACATCCTTTATCCTCACTAACGTGCACTCAACATAGAATTTCTCCCAGCAAAACACACTTAACCATAGAGTTCCTATGATAGAGCTACAAAAAAAGGAAAGTACACCTTGTTGGTACAGGTAGTAATGTTCATTCCTCTCATTCGGATTTGGTTTCAGTTCATTTATGTACCCCCTCTTTTACTCAAGTGTTACATGCCTAGCAGCTTTCGCCTTGATTCGTCCCAAAGCCACATCTTACCGAGAGAGGTATTGCTTTGATACCATTTATAACGACCCATGTCCAAGATTCAGATCAAGATTCGAAATCCAGATTCCACACTTGATGGCCCCGGCATTTCCCTATGACATGGTTATGGTACTTCCCGCTTTTAAGAGCAAAGACTATCCCCTTGTGCTAGGCTGACTTCCTTCTTACCTTTTGGGGTCTGTGATTTGAAATAAACAACAGTGTTTAGGGACGCGGAGAGGTGCTGGGAGTAGGTTCGGTCATAACTGAAGCTTAACGCCTCTGTTTGGGCGTCAGTCTCGAAGGATCTTTATAGTTACCCATTCGGTTTCATCACACGGAATTGGAGCCATTTTTTGTATAGCTAGTTTCTTGCCTCCTTTAAGTAGCTTATAATAAATATCAGAAGGGCATAGTTCTTGTAGCCAACTAATTTTAGCTTGTTTCCATGTTGCACATAGTAACCTCTTAGCTCTATTTAGACTGCTTGTTTGTTTCCTGAACTCGGCCGATACGATTTTACTTGCTATTACAGCATGGTGGCTGCTTTTGGATCTGGGGCCATGTTTTCATTGGTGAGCGGAATGGGAGGCCCGAATCAGGTGGCAAACGCCGTCACCTCGGGTCTTTTTTTCTCGCTCGTTCAAGGTGGACTTTTCAAGGTACGCATCAATAACAACTGTTCTATTATTCTGATAAATTTCAAGCATTTCAAGCACGTCCTCGGCTGTTCCTTTGTTCTTATACCAAAATTTGGAACTTGTTTAAGAATTAATGGTGTTTTTCAGTTAGGCGAAAAGTATTCTAAGCCACCTGCGGAAGACGTGTTCTACGCTAAAACCCGAAGCATGTTGAGTAACCTTGGCCTTGCTAGCTATGAGAAGAATTTCAAGAAAGGCTTATTGACTGATAGCACATTGCCTCTGCTCACTGATAGGCATGTATATTGAATTCATGTTTTCATACTTATGGTTATAATCAATGCATTTGCTAAGTATGTATACCCTTCTGCTTTGACGTGTGCCAGTGCGCTTAGAGATGTTAAGATCCCCCCGGGACCGAGGCTTTTGATTCTTGATCACATTCAGAGGTTTTAATCGAGCTCTATACGTAAAGTTCTTGTTGCTTCCATTGTTCTATGTCGTCTTGTTTATGGTTAACTTTTGATTTCAGGAACGCCGAGCTACGAGAGAGATGAAGCGGGTTTTGTGAGCAGCTTGTCCCAAGAACTCTTCGTAGGTGAACTTGATGAGGTAGGGAAGTGGTTAGTTCATCTTGAATAGGAAGAATATGTTTGATTAATAGGACTTTTTTGTCGTTTGAATTTGCACCAAATGCACCTTTTGATTTGATTGTTGTGGATGACTGAACCATGGCTTTGTTTATTAATGAATGATGGAACAACTTGGTTTGGTTGGCATATTGACTAAAAATTTGTATTGTTAAAAATCACGTTGTGCCTATAAGACAAAGAGAGAGGTGAATGTGGGTGTGGTGCTAAACCACCACAACTCCGACCACAACTCCGACCACAACTCCGACTATCGACTGA

mRNA sequence

ATACATACATACATGTATAAATATATAATATTAAATTAGGGCAGGCTTGGGATTCTAAAGCTGAATAAGAACAAAAGTAATACATATTTGTTATCCATCCACCGCTCTCTGGATCCGGCTCGAAGCCTCAATTTTCTGCGAAACTGAACTGTCGCCGGACGATAGAGGAGGCAACGGAGAAGAAATTAAGGCTCCAATTGGCTTATCATTGATGGAGCAGGGGAAGCAGGGAGTGGTTGTTAAATTGAGCCCTCCACAGAACCCATTGGAGCAGGTTCAGGCTCGTTTCAAGGAACTTGAAAATGGGTTCAGAACATGGTTGGCCAAGCAGTCTCTTCCCGTTGAGGCCGCTGTTGTCACCGCCACCAGCGCTGCACAGGGCGCTGCTATTGGTGGCTTTATGGGCGTTCTCACCAACGACGTTTCTTCGTCTCTGCCCACTCCTCAAGCCGGCCTCAACCCTCAAGCCATGGCCTCTTTCAAGCAGGCTCAGGCTCTTGCTGGAGGTCCCTTGGTGCAAGCTCGCAACTTCGCCGTGATGACCGGTGTTAATGCAGGCATATCTTCTGTTATGAAGAGATTGAGAGGCAAGGAGGATGTTCACATGGTGGCTGCTTTTGGATCTGGGGCCATGTTTTCATTGGTGAGCGGAATGGGAGGCCCGAATCAGGTGGCAAACGCCGTCACCTCGGGTCTTTTTTTCTCGCTCGTTCAAGGTGGACTTTTCAAGTTAGGCGAAAAGTATTCTAAGCCACCTGCGGAAGACGTGTTCTACGCTAAAACCCGAAGCATGTTGAGTAACCTTGGCCTTGCTAGCTATGAGAAGAATTTCAAGAAAGGCTTATTGACTGATAGCACATTGCCTCTGCTCACTGATAGGCATGAACGCCGAGCTACGAGAGAGATGAAGCGGGTTTTGTGAGCAGCTTGTCCCAAGAACTCTTCGTAGGTGAACTTGATGAGGTAGGGAAGTGGTTAGTTCATCTTGAATAGGAAGAATATGTTTGATTAATAGGACTTTTTTGTCGTTTGAATTTGCACCAAATGCACCTTTTGATTTGATTGTTGTGGATGACTGAACCATGGCTTTGTTTATTAATGAATGATGGAACAACTTGGTTTGGTTGGCATATTGACTAAAAATTTGTATTGTTAAAAATCACGTTGTGCCTATAAGACAAAGAGAGAGGTGAATGTGGGTGTGGTGCTAAACCACCACAACTCCGACCACAACTCCGACCACAACTCCGACTATCGACTGA

Coding sequence (CDS)

ATGGAGCAGGGGAAGCAGGGAGTGGTTGTTAAATTGAGCCCTCCACAGAACCCATTGGAGCAGGTTCAGGCTCGTTTCAAGGAACTTGAAAATGGGTTCAGAACATGGTTGGCCAAGCAGTCTCTTCCCGTTGAGGCCGCTGTTGTCACCGCCACCAGCGCTGCACAGGGCGCTGCTATTGGTGGCTTTATGGGCGTTCTCACCAACGACGTTTCTTCGTCTCTGCCCACTCCTCAAGCCGGCCTCAACCCTCAAGCCATGGCCTCTTTCAAGCAGGCTCAGGCTCTTGCTGGAGGTCCCTTGGTGCAAGCTCGCAACTTCGCCGTGATGACCGGTGTTAATGCAGGCATATCTTCTGTTATGAAGAGATTGAGAGGCAAGGAGGATGTTCACATGGTGGCTGCTTTTGGATCTGGGGCCATGTTTTCATTGGTGAGCGGAATGGGAGGCCCGAATCAGGTGGCAAACGCCGTCACCTCGGGTCTTTTTTTCTCGCTCGTTCAAGGTGGACTTTTCAAGTTAGGCGAAAAGTATTCTAAGCCACCTGCGGAAGACGTGTTCTACGCTAAAACCCGAAGCATGTTGAGTAACCTTGGCCTTGCTAGCTATGAGAAGAATTTCAAGAAAGGCTTATTGACTGATAGCACATTGCCTCTGCTCACTGATAGGCATGAACGCCGAGCTACGAGAGAGATGAAGCGGGTTTTGTGA

Protein sequence

MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAIGGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGKEDVHMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKYSKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDRHERRATREMKRVL
Homology
[Close]
BLAST of Cp4.1LG05g05730 vs. TrEMBL
Match: A0A0A0KJR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139080 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 6.6e-108
Identity = 207/226 (91.59%), Postives = 215/226 (95.13%), Query Frame = 1 

Query: 1   MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKL P QNP+EQ+QARFKELENGFRTWLAKQSLPVEAAVVT TSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI 60

Query: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMG LTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVH--MVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180
           MKRLRGKEDV   MVAAFGSGAMFSLVSGMGGPNQ  NAVTSGLFF+LVQGGLFKLGEK+
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDRH 225
           S+PP EDV+YAKTRSML+NLGL SYEKNFKKGLLTD+TLPLLTDRH
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRH 226

[Close]
BLAST of Cp4.1LG05g05730 vs. TrEMBL
Match: M5XLV4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010176mg PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.3e-95
Identity = 187/226 (82.74%), Postives = 205/226 (90.71%), Query Frame = 1 

Query: 1   MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60
           M+QGKQGV+V     QNP+EQ+QARFKELE+GF+ WLAKQSLPVEAAVVT TS AQGAAI
Sbjct: 1   MQQGKQGVMVIPQQNQNPIEQLQARFKELESGFKGWLAKQSLPVEAAVVTLTSGAQGAAI 60

Query: 61  GGFMGVLTNDVSSSLPTP--QAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGIS 120
           G FMG LTNDVSSSLPTP  QAGLNPQAMASFKQAQALAGGPL+QARNFAVMTGVNAGIS
Sbjct: 61  GAFMGTLTNDVSSSLPTPPPQAGLNPQAMASFKQAQALAGGPLIQARNFAVMTGVNAGIS 120

Query: 121 SVMKRLRGKEDVH--MVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGE 180
            VMKRLRGKEDV   MVAAFGSGA+FSLVSGMGGPNQ ANA TSGLFF+LVQGGLFKLG+
Sbjct: 121 CVMKRLRGKEDVQSSMVAAFGSGALFSLVSGMGGPNQAANAATSGLFFALVQGGLFKLGQ 180

Query: 181 KYSKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTD 223
           K+S+PP ED++Y+KTRSMLSNLGL +YEKNFKKGLL+D+TLPLL D
Sbjct: 181 KFSQPPTEDIYYSKTRSMLSNLGLQNYEKNFKKGLLSDNTLPLLND 226

[Close]
BLAST of Cp4.1LG05g05730 vs. TrEMBL
Match: A0A061G2Z0_THECC (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein OS=Theobroma cacao GN=TCM_015552 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 3.2e-94
Identity = 184/226 (81.42%), Postives = 210/226 (92.92%), Query Frame = 1 

Query: 1   MEQGK-QGVVV-KLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGA 60
           ME+GK QG++V +L P QNPLEQ+QA+FKE+ENGFRTWLAKQS+PVEAAVVT TSAAQGA
Sbjct: 50  MERGKEQGLMVPRLMPQQNPLEQLQAKFKEVENGFRTWLAKQSMPVEAAVVTGTSAAQGA 109

Query: 61  AIGGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGIS 120
           AIG FMG LTND+SSSLPTPQ+ LNPQAMAS +QAQAL+GGPLVQARNFAVMTGVNAGIS
Sbjct: 110 AIGAFMGTLTNDISSSLPTPQSSLNPQAMASLQQAQALSGGPLVQARNFAVMTGVNAGIS 169

Query: 121 SVMKRLRGKEDVH--MVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGE 180
            VM+RLRGKEDV   MVAAFGSGAMFSLVSG+GGPNQ ANAV+SGLFF+LVQGGLF+LG+
Sbjct: 170 CVMRRLRGKEDVQSSMVAAFGSGAMFSLVSGIGGPNQAANAVSSGLFFALVQGGLFQLGK 229

Query: 181 KYSKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTD 223
           K+S+PPAED +Y++TRSML++LGL +YEKNFKKGLLTDSTLPLLTD
Sbjct: 230 KFSQPPAEDPYYSRTRSMLNSLGLQNYEKNFKKGLLTDSTLPLLTD 275

[Close]
BLAST of Cp4.1LG05g05730 vs. TrEMBL
Match: A0A058ZZ62_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00480 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 4.6e-93
Identity = 183/226 (80.97%), Postives = 203/226 (89.82%), Query Frame = 1 

Query: 1   MEQGKQGVVV-KLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAA 60
           MEQGK+G+VV KL PP NP+EQ+Q+RFKE+E GF+ WL+KQSLPVEAAVVTAT A QGAA
Sbjct: 1   MEQGKRGIVVSKLLPPNNPIEQLQSRFKEIEAGFKDWLSKQSLPVEAAVVTATGATQGAA 60

Query: 61  IGGFMGVLTNDVSSSL-PTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGIS 120
           IG  MG LTNDVS+SL P P A LNPQAMAS KQAQAL+GGPL+QARNFAVMTGVNAGIS
Sbjct: 61  IGAIMGTLTNDVSASLGPPPGANLNPQAMASLKQAQALSGGPLIQARNFAVMTGVNAGIS 120

Query: 121 SVMKRLRGKEDVH--MVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGE 180
            VMKRLRGKEDV   MVAAFGSGAMFSLVSGMGGPNQ ANAVTSG FF+LVQGGLFKLG+
Sbjct: 121 CVMKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGFFFALVQGGLFKLGQ 180

Query: 181 KYSKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTD 223
           K+S+PP EDV+Y++TRSMLSNLGL +YEKNFKKGLLTD+TLPLLTD
Sbjct: 181 KFSQPPVEDVYYSQTRSMLSNLGLQNYEKNFKKGLLTDTTLPLLTD 226

[Close]
BLAST of Cp4.1LG05g05730 vs. TrEMBL
Match: A0A058ZY00_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00480 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 4.6e-93
Identity = 183/226 (80.97%), Postives = 203/226 (89.82%), Query Frame = 1 

Query: 1   MEQGKQGVVV-KLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAA 60
           MEQGK+G+VV KL PP NP+EQ+Q+RFKE+E GF+ WL+KQSLPVEAAVVTAT A QGAA
Sbjct: 1   MEQGKRGIVVSKLLPPNNPIEQLQSRFKEIEAGFKDWLSKQSLPVEAAVVTATGATQGAA 60

Query: 61  IGGFMGVLTNDVSSSL-PTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGIS 120
           IG  MG LTNDVS+SL P P A LNPQAMAS KQAQAL+GGPL+QARNFAVMTGVNAGIS
Sbjct: 61  IGAIMGTLTNDVSASLGPPPGANLNPQAMASLKQAQALSGGPLIQARNFAVMTGVNAGIS 120

Query: 121 SVMKRLRGKEDVH--MVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGE 180
            VMKRLRGKEDV   MVAAFGSGAMFSLVSGMGGPNQ ANAVTSG FF+LVQGGLFKLG+
Sbjct: 121 CVMKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGFFFALVQGGLFKLGQ 180

Query: 181 KYSKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTD 223
           K+S+PP EDV+Y++TRSMLSNLGL +YEKNFKKGLLTD+TLPLLTD
Sbjct: 181 KFSQPPVEDVYYSQTRSMLSNLGLQNYEKNFKKGLLTDTTLPLLTD 226

[Close]
BLAST of Cp4.1LG05g05730 vs. TAIR10
Match: AT5G24650.1 (AT5G24650.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein)

HSP 1 Score: 245.4 bits (625), Expect = 3.6e-65
Identity = 132/217 (60.83%), Postives = 160/217 (73.73%), Query Frame = 1 

Query: 8   VVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAIGGFMGVL 67
           V+  +   QNP++Q Q +FKE+E GF++WL+KQ LPVEAAVVTA    QGA IGG MG L
Sbjct: 16  VMSLMKDQQNPIQQFQVKFKEIETGFKSWLSKQKLPVEAAVVTAMGGVQGAFIGGLMGTL 75

Query: 68  TNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGK 127
           + ++      PQAG++PQAMAS KQ QAL GGPLVQARNFA +TGVNAGI+ VMKR+RGK
Sbjct: 76  SPEM------PQAGIDPQAMASLKQTQALVGGPLVQARNFAAITGVNAGIACVMKRIRGK 135

Query: 128 EDVH--MVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKYSKPPAED 187
           ED+   +VAAFGSG  +SLVS  G   Q  NA+T+   F++ QG  FKLGE++SKP  ED
Sbjct: 136 EDLESAVVAAFGSGVAYSLVSA-GLQGQPMNAITTAAGFAVFQGVFFKLGERFSKPSVED 195

Query: 188 VFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTD 223
            +Y + RSML  LGL  YEKNFKKGLL D TLPLLTD
Sbjct: 196 PYYTRGRSMLLKLGLEKYEKNFKKGLLADPTLPLLTD 225

[Close]
BLAST of Cp4.1LG05g05730 vs. TAIR10
Match: AT3G49560.1 (AT3G49560.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein)

HSP 1 Score: 240.4 bits (612), Expect = 1.2e-63
Identity = 129/209 (61.72%), Postives = 158/209 (75.60%), Query Frame = 1 

Query: 16  QNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAIGGFMGVLTNDVSSSL 75
           QNP++Q Q +FKE+E  F+TWL+KQS+PVEAAVV+  S  QGA IGG MG L+ ++    
Sbjct: 29  QNPIQQFQVKFKEVETNFKTWLSKQSIPVEAAVVSTMSGVQGAFIGGLMGTLSPEM---- 88

Query: 76  PTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGKEDVH--MV 135
             PQAG++PQA+AS KQAQAL GGP VQARNFA +TGVNAGI+SVMKR+RGKED+   +V
Sbjct: 89  --PQAGVDPQAIASMKQAQALVGGPWVQARNFAAITGVNAGIASVMKRIRGKEDIESAVV 148

Query: 136 AAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKYSKPPAEDVFYAKTRS 195
           AA GSG  +SLVS  G   Q  NA+T+   F++ QG  FKLGE++SKP  ED F+ + R+
Sbjct: 149 AALGSGFAYSLVS-QGLQGQPMNAITTAAGFAVFQGVFFKLGERFSKPSTEDPFFTRGRT 208

Query: 196 MLSNLGLASYEKNFKKGLLTDSTLPLLTD 223
           ML  LGL  YEKNFKKGLLTD TLPLLTD
Sbjct: 209 MLVKLGLEKYEKNFKKGLLTDPTLPLLTD 230

[Close]
BLAST of Cp4.1LG05g05730 vs. NCBI nr
Match: gi|659074526|ref|XP_008437651.1| (PREDICTED: uncharacterized protein LOC103482996 [Cucumis melo])

HSP 1 Score: 401.7 bits (1031), Expect = 8.6e-109
Identity = 209/224 (93.30%), Postives = 217/224 (96.88%), Query Frame = 1 

Query: 1   MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKL+PPQNPLEQ+QARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLTPPQNPLEQIQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMG LTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVH--MVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180
           MKRLRGKEDV   MVAAFGSGAMFSLVSGMGGPNQ ANAVTSGLFF+LVQGGLFKLGEK+
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTD 223
           S+PP EDV+YAKTRSML+NLGL SYEKNFKKGLLTD+TLPLLTD
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224

[Close]
BLAST of Cp4.1LG05g05730 vs. NCBI nr
Match: gi|700194651|gb|KGN49828.1| (hypothetical protein Csa_5G139080 [Cucumis sativus])

HSP 1 Score: 398.3 bits (1022), Expect = 9.5e-108
Identity = 207/226 (91.59%), Postives = 215/226 (95.13%), Query Frame = 1 

Query: 1   MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKL P QNP+EQ+QARFKELENGFRTWLAKQSLPVEAAVVT TSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI 60

Query: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMG LTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVH--MVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180
           MKRLRGKEDV   MVAAFGSGAMFSLVSGMGGPNQ  NAVTSGLFF+LVQGGLFKLGEK+
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDRH 225
           S+PP EDV+YAKTRSML+NLGL SYEKNFKKGLLTD+TLPLLTDRH
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRH 226

[Close]
BLAST of Cp4.1LG05g05730 vs. NCBI nr
Match: gi|449456433|ref|XP_004145954.1| (PREDICTED: uncharacterized protein LOC101208652 [Cucumis sativus])

HSP 1 Score: 393.3 bits (1009), Expect = 3.0e-106
Identity = 205/224 (91.52%), Postives = 213/224 (95.09%), Query Frame = 1 

Query: 1   MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKL P QNP+EQ+QARFKELENGFRTWLAKQSLPVEAAVVT TSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI 60

Query: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMG LTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVH--MVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180
           MKRLRGKEDV   MVAAFGSGAMFSLVSGMGGPNQ  NAVTSGLFF+LVQGGLFKLGEK+
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTD 223
           S+PP EDV+YAKTRSML+NLGL SYEKNFKKGLLTD+TLPLLTD
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224

[Close]
BLAST of Cp4.1LG05g05730 vs. NCBI nr
Match: gi|657945823|ref|XP_008381679.1| (PREDICTED: uncharacterized protein LOC103444516 [Malus domestica])

HSP 1 Score: 366.7 bits (940), Expect = 3.1e-98
Identity = 194/227 (85.46%), Postives = 209/227 (92.07%), Query Frame = 1 

Query: 1   MEQGKQGVVV-KLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAA 60
           MEQGKQGV+V K+ PPQNP+EQ+QARFKELE GFR WLAKQSLPVEAAVVT TS AQGAA
Sbjct: 1   MEQGKQGVMVAKMVPPQNPIEQLQARFKELEAGFRGWLAKQSLPVEAAVVTLTSGAQGAA 60

Query: 61  IGGFMGVLTNDVSSSLPTP--QAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGI 120
           IG FMG LTNDVSSSLPTP  QAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGI
Sbjct: 61  IGAFMGTLTNDVSSSLPTPPPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGI 120

Query: 121 SSVMKRLRGKEDVH--MVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLG 180
           S VMKR+RGKEDV   MVAAFGSGA+FSLVSGMGGPNQ ANAVTSGLFF+LVQGGLFKLG
Sbjct: 121 SCVMKRVRGKEDVQSSMVAAFGSGALFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLG 180

Query: 181 EKYSKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTD 223
           +K+S+PP ED++YAKTRSML+NLGL SYEKNFKKGLL+D+TLPLL D
Sbjct: 181 QKFSQPPTEDIYYAKTRSMLNNLGLQSYEKNFKKGLLSDNTLPLLND 227

[Close]
BLAST of Cp4.1LG05g05730 vs. NCBI nr
Match: gi|694321447|ref|XP_009351884.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-like [Pyrus x bretschneideri])

HSP 1 Score: 362.1 bits (928), Expect = 7.5e-97
Identity = 192/227 (84.58%), Postives = 207/227 (91.19%), Query Frame = 1 

Query: 1   MEQGKQGVVV-KLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAA 60
           MEQGKQGV+V K+ PPQNP+EQ+QARFKELE GFR WLAKQSLPVEAAVVT TS AQGAA
Sbjct: 1   MEQGKQGVMVAKMVPPQNPIEQLQARFKELEAGFRGWLAKQSLPVEAAVVTLTSGAQGAA 60

Query: 61  IGGFMGVLTNDVSSSLPTP--QAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGI 120
           IG FMG LTNDVSSSLPTP  QA LNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGI
Sbjct: 61  IGAFMGTLTNDVSSSLPTPPPQASLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGI 120

Query: 121 SSVMKRLRGKEDVH--MVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLG 180
           S VMKR+RGKEDV   MVAAFGSGA+FSLVSGM GPNQ ANAVTSGLFF+LVQGGLFKLG
Sbjct: 121 SCVMKRVRGKEDVQSSMVAAFGSGALFSLVSGMAGPNQAANAVTSGLFFALVQGGLFKLG 180

Query: 181 EKYSKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTD 223
           +K+S+PP ED++YAKTRSML+NLGL SYEKNFKKGLL+D+TLPLL D
Sbjct: 181 QKFSQPPTEDIYYAKTRSMLNNLGLQSYEKNFKKGLLSDNTLPLLND 227

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g05730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG05g05730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJR1_CUCSA6.6e-10891.59Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139080 PE=4 SV=1[more]
M5XLV4_PRUPE1.3e-9582.74Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010176mg PE=4 SV=1[more]
A0A061G2Z0_THECC3.2e-9481.42Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family... [more]
A0A058ZZ62_EUCGR4.6e-9380.97Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00480 PE=4 SV=1[more]
A0A058ZY00_EUCGR4.6e-9380.97Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00480 PE=4 SV=1[more]
BLAST of Cp4.1LG05g05730 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G24650.13.6e-6560.83 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/... [more]
AT3G49560.11.2e-6361.72 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/... [more]
BLAST of Cp4.1LG05g05730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074526|ref|XP_008437651.1|8.6e-10993.30PREDICTED: uncharacterized protein LOC103482996 [Cucumis melo][more]
gi|700194651|gb|KGN49828.1|9.5e-10891.59hypothetical protein Csa_5G139080 [Cucumis sativus][more]
gi|449456433|ref|XP_004145954.1|3.0e-10691.52PREDICTED: uncharacterized protein LOC101208652 [Cucumis sativus][more]
gi|657945823|ref|XP_008381679.1|3.1e-9885.46PREDICTED: uncharacterized protein LOC103444516 [Malus domestica][more]
gi|694321447|ref|XP_009351884.1|7.5e-9784.58PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-like [P... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003397Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045039 protein import into mitochondrial inner membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0042721 mitochondrial inner membrane protein insertion complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g05730.1Cp4.1LG05g05730.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003397Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24PFAMPF02466Tim17coord: 50..164
score: 5.
NoneNo IPR availablePANTHERPTHR14110MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 16..222
score: 2.8E
NoneNo IPR availablePANTHERPTHR14110:SF6SUBFAMILY NOT NAMEDcoord: 16..222
score: 2.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g05730Cucsa.202450Cucumber (Gy14) v1cgycpeB0576
Cp4.1LG05g05730CmaCh15G009930Cucurbita maxima (Rimu)cmacpeB330
Cp4.1LG05g05730CmaCh02G011490Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g05730CmoCh15G010530Cucurbita moschata (Rifu)cmocpeB293
Cp4.1LG05g05730CmoCh02G011850Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g05730Csa5G139080Cucumber (Chinese Long) v2cpecuB730
Cp4.1LG05g05730MELO3C005915Melon (DHL92) v3.5.1cpemeB651
Cp4.1LG05g05730CSPI05G02840Wild cucumber (PI 183967)cpecpiB733
Cp4.1LG05g05730MELO3C005915.2Melon (DHL92) v3.6.1cpemedB779
Cp4.1LG05g05730CsaV3_5G000150Cucumber (Chinese Long) v3cpecucB0910
Cp4.1LG05g05730CsGy5G000120Cucumber (Gy14) v2cgybcpeB686
Cp4.1LG05g05730Carg13987Silver-seed gourdcarcpeB0718
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG05g05730Cp4.1LG13g03400Cucurbita pepo (Zucchini)cpecpeB227
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g05730Watermelon (Charleston Gray)cpewcgB635
Cp4.1LG05g05730Cucumber (Chinese Long) v3cpecucB0919
Cp4.1LG05g05730Wax gourdcpewgoB0916
Cp4.1LG05g05730Wild cucumber (PI 183967)cpecpiB741
Cp4.1LG05g05730Cucumber (Chinese Long) v2cpecuB740