Cp4.1LG05g04990 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGAACCCAACGTTCATCTTCCAACGCATTTTGAATTTTCCCTCTCAAAACTAAGAATTTGAATATTATTAAAACCAAAAACAAAATTATTTTGATTTACGCTTACACTCCTCTGCAACTGCGTTTTTGGATTTCTTTCCGCCATGGAAGATCAAGATGCCCTGGAGAATGTTTTCCGATCATTCCCCACTTTGGTCTCTTTTTCATCCCCTGTTCATACGCCTTCACAGCGCCGTCTGTCCAGCAGCTTCACTCATCCCAGGCCGCCGGTTCCTGCTGCTCGACGGTTAGCTTGGGTTTCTCTTCAAGGGCGACTCGTTAACGCCGAACAAGCCAGCTCGGTTCGATCTATTAGAGGCAGCTTCGGCCCTGACGAAGCCATCGCTTGGCAGTTGTTCAGCCCCATTGAGCGGTTTCTTATAGTTGCAGTGATTGGCGTTGCGGTTTCCGAGTCCAAGAAGAATCATCAGATCGGCCAGCTTCAAAGAGCTGTCGAACTTAGGGTTTGTGGTTTCTTAATTCAACCTAGTTTTTTTTCCCCTATGGTACTAATGGTTCTGCGATGGATTTATAACTGCTGGTGTTTAATCTACATTTAGGGTTTTCTGTTCTTCCCTTATGCCTCGTAATGTAATCTACATCCATAAAATCGTATTTATGAACAAGTAATATGGTAATGGCGGCTACTTGTTAGAATAGCTTCTCAAATTTGAACTTCTACCTGATAGAATGTAACGGAAACTGATTAATCTATTCATTCTTTTGAAATTGCTTTGGGTAATCTATCAAATTTATTCTATACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNATTTTAAAATGATGCGTTTATAATGTCATGCTACTACTTTTGTTTGTCCCAATTGTCTGGCCCCATGCGTCTTTTCAAGCATATCTTGAGATTTATTATCAAAAATCCATTGGTGGTGGTTAACTAATTACTCACTTTATGGGAACTCAAAACAATAACAAAAAGGAAGTACTCACTTTTTGGTATTTGAGTACGAGAATCTAATGAGTTTTGTTTTTGTGGGCCATTGTTCTTATTAAATTGCTTCTTGTTTGGAATAACCAGGATCAAGTGCTCCTAAGCATGCAGCAGAAGCTTGATGATCTATGTGATCAAGTCATTCCCATTAAGGATCATTGTAGAACTGAGAATGACATGGGTTCGAGAAAGAATGTCGATTTGGCTGATTCTGGGGCCTTTGGCGATGACAAAATTAAGTTTGTTGATTGTGGCTGTTGGATTTGTGATCAGCATCACCATTTGTTCAGTGGTTTGGAGGTAAAAATACTATTCTTTGTCGGTTTGAAATTTATGAACTCAGATTTTCGTTTATCTTTTGATTTTTGTTTTACTTCAGCAGTGTAACACCGCGACAAAGCCCTCTTGCGGGGCAGAGATGTTGCAATACAAAATGCCACTCATGAACGAAGCAGAGCAAGAGGAGCGTCGCATGTCTGATTTGTCAGATTGGGCTTCCAGTGTCACGTCTGCTGCTGATAATGATATGCAGGTCGGTCCAAGTTTTAAGTTGTTTTCTCTGCTTCTGATTTCCATTGAACTCAGAATTTTTATGATCATGTTGGCGTGTTCTTTACAGATGAACACCTTATCAATTGAACAAGATATGTTATTTCTGAAGAAAGATTGTAATGAGAAAGACGCAACCATCAAAGAATTGACTAATCTACTCCATTCGGCTGAGGTTTCTGGCTCACAGGTAATAATGCTGTTCTGTTCTTCAATTTTCCCCCTGCTTCAAACCCTGGCGTGCAAGGTTTTTCTTTTTCCCCTGATGATCTCTTGTATTTTTCAACACCACAGAGGATGTCTGAGCTGGAAGACATCATTCGTCGGAAGAACATGATCATCTCAAAATTAAAGAAAGACATGGTCGTTCTTGAACAGAAGGTACCAAACACAGACAGGGCATCATCAATTTTAGACTTCTACAAGTTTAGAGTCTCACCTTTTCTAATTGTGTTTGTGTTTCGCGAACCCAGGTTATTCAACTGACAAGACTGCGGAGGCCCTCTTCGTGTGCATCAAACGCGGAAATACAGCCGATTCCTTATATGACTGACAACCTTCTTTACGACATGGAAAGCAGTACAAGTCCTTCATCTTCCGACTCAGATTGCTTCCCTTCAGAAAGTTCACAACCTCCTCCCCCAACTAGAAAACATGAGATTCATCGTATACAAATTAGCGAGCCCTGTTTAACAAGAACCCAGAAATCAGCTACTAAGAAGAGACCTTCAACATCAGATTCCCGCTCAAAACCTCAGGTGGCAACCCCTCTGAAAGAACTATCGATGAACAATCGAAAATCAGAAGCCATGTCGACATCATCTAGGCAAAGAGCGGATAAGGTCCGTGCCAGTGGCGATTCCACAAATAGCAGAAGACGCATTCAAACTGTGGCCAAGGACACACCTCAACGAAAGAGGAATATGTAGTAAGAATGTTAATAATACACAGCTACGAAGCTTGAAAATATGAAACATTAAGAACATGGGTTTCCGGGTAATCTGTTGAGGATAATTTCTTCTCAGCGTGTTCTTCGTTTGTTGGTCCTTTTTTGGAGAATGTTTAGGAGAGGGTAGTAGAAATGCTTTTGACAGAAGCTGTTGTACTTAGGTAAATATGGGTCGGAGAATATGTAGCAGCACATTTATCCACAAAATTGTTATATATCTTACTATATAATGTTAATGCCGTTGGTTAATTTGATGAAATCATTAAATTCATGGTTGATATGATATGAAATCAACCATGAATTTAATTATCTGAAGTGCAAGTAGTTGGGAAGGATTCTGTTGAGATATATTATTTATGGAATATATCTTAGATATTATATCTTAATATTCTTCCATTTATGGTTAGATTTATAGTATATTTTATTTTATTCTAGTATTTAATTATTTTATATTTTCCTCATTTG CAGAACCCAACGTTCATCTTCCAACGCATTTTGAATTTTCCCTCTCAAAACTAAGAATTTGAATATTATTAAAACCAAAAACAAAATTATTTTGATTTACGCTTACACTCCTCTGCAACTGCGTTTTTGGATTTCTTTCCGCCATGGAAGATCAAGATGCCCTGGAGAATGTTTTCCGATCATTCCCCACTTTGGTCTCTTTTTCATCCCCTGTTCATACGCCTTCACAGCGCCGTCTGTCCAGCAGCTTCACTCATCCCAGGCCGCCGGTTCCTGCTGCTCGACGGTTAGCTTGGGTTTCTCTTCAAGGGCGACTCGTTAACGCCGAACAAGCCAGCTCGGTTCGATCTATTAGAGGCAGCTTCGGCCCTGACGAAGCCATCGCTTGGCAGTTGTTCAGCCCCATTGAGCGGTTTCTTATAGTTGCAGTGATTGGCGTTGCGGTTTCCGAGTCCAAGAAGAATCATCAGATCGGCCAGCTTCAAAGAGCTGTCGAACTTAGGGATCAAGTGCTCCTAAGCATGCAGCAGAAGCTTGATGATCTATGTGATCAAGTCATTCCCATTAAGGATCATTGTAGAACTGAGAATGACATGGGTTCGAGAAAGAATGTCGATTTGGCTGATTCTGGGGCCTTTGGCGATGACAAAATTAAGTTTGTTGATTGTGGCTGTTGGATTTGTGATCAGCATCACCATTTGTTCAGTGGTTTGGAGCAGTGTAACACCGCGACAAAGCCCTCTTGCGGGGCAGAGATGTTGCAATACAAAATGCCACTCATGAACGAAGCAGAGCAAGAGGAGCGTCGCATGTCTGATTTGTCAGATTGGGCTTCCAGTGTCACGTCTGCTGCTGATAATGATATGCAGATGAACACCTTATCAATTGAACAAGATATGTTATTTCTGAAGAAAGATTGTAATGAGAAAGACGCAACCATCAAAGAATTGACTAATCTACTCCATTCGGCTGAGGTTTCTGGCTCACAGAGGATGTCTGAGCTGGAAGACATCATTCGTCGGAAGAACATGATCATCTCAAAATTAAAGAAAGACATGGTCGTTCTTGAACAGAAGGTTATTCAACTGACAAGACTGCGGAGGCCCTCTTCGTGTGCATCAAACGCGGAAATACAGCCGATTCCTTATATGACTGACAACCTTCTTTACGACATGGAAAGCAGTACAAGTCCTTCATCTTCCGACTCAGATTGCTTCCCTTCAGAAAGTTCACAACCTCCTCCCCCAACTAGAAAACATGAGATTCATCGTATACAAATTAGCGAGCCCTGTTTAACAAGAACCCAGAAATCAGCTACTAAGAAGAGACCTTCAACATCAGATTCCCGCTCAAAACCTCAGGTGGCAACCCCTCTGAAAGAACTATCGATGAACAATCGAAAATCAGAAGCCATGTCGACATCATCTAGGCAAAGAGCGGATAAGGTCCGTGCCAGTGGCGATTCCACAAATAGCAGAAGACGCATTCAAACTGTGGCCAAGGACACACCTCAACGAAAGAGGAATATGTAGTAAGAATGTTAATAATACACAGCTACGAAGCTTGAAAATATGAAACATTAAGAACATGGGTTTCCGGGTAATCTGTTGAGGATAATTTCTTCTCAGCGTGTTCTTCGTTTGTTGGTCCTTTTTTGGAGAATGTTTAGGAGAGGGTAGTAGAAATGCTTTTGACAGAAGCTGTTGTACTTAGGTAAATATGGGTCGGAGAATATGTAGCAGCACATTTATCCACAAAATTGTTATATATCTTACTATATAATGTTAATGCCGTTGGTTAATTTGATGAAATCATTAAATTCATGGTTGATATGATATGAAATCAACCATGAATTTAATTATCTGAAGTGCAAGTAGTTGGGAAGGATTCTGTTGAGATATATTATTTATGGAATATATCTTAGATATTATATCTTAATATTCTTCCATTTATGGTTAGATTTATAGTATATTTTATTTTATTCTAGTATTTAATTATTTTATATTTTCCTCATTTG ATGGAAGATCAAGATGCCCTGGAGAATGTTTTCCGATCATTCCCCACTTTGGTCTCTTTTTCATCCCCTGTTCATACGCCTTCACAGCGCCGTCTGTCCAGCAGCTTCACTCATCCCAGGCCGCCGGTTCCTGCTGCTCGACGGTTAGCTTGGGTTTCTCTTCAAGGGCGACTCGTTAACGCCGAACAAGCCAGCTCGGTTCGATCTATTAGAGGCAGCTTCGGCCCTGACGAAGCCATCGCTTGGCAGTTGTTCAGCCCCATTGAGCGGTTTCTTATAGTTGCAGTGATTGGCGTTGCGGTTTCCGAGTCCAAGAAGAATCATCAGATCGGCCAGCTTCAAAGAGCTGTCGAACTTAGGGATCAAGTGCTCCTAAGCATGCAGCAGAAGCTTGATGATCTATGTGATCAAGTCATTCCCATTAAGGATCATTGTAGAACTGAGAATGACATGGGTTCGAGAAAGAATGTCGATTTGGCTGATTCTGGGGCCTTTGGCGATGACAAAATTAAGTTTGTTGATTGTGGCTGTTGGATTTGTGATCAGCATCACCATTTGTTCAGTGGTTTGGAGCAGTGTAACACCGCGACAAAGCCCTCTTGCGGGGCAGAGATGTTGCAATACAAAATGCCACTCATGAACGAAGCAGAGCAAGAGGAGCGTCGCATGTCTGATTTGTCAGATTGGGCTTCCAGTGTCACGTCTGCTGCTGATAATGATATGCAGATGAACACCTTATCAATTGAACAAGATATGTTATTTCTGAAGAAAGATTGTAATGAGAAAGACGCAACCATCAAAGAATTGACTAATCTACTCCATTCGGCTGAGGTTTCTGGCTCACAGAGGATGTCTGAGCTGGAAGACATCATTCGTCGGAAGAACATGATCATCTCAAAATTAAAGAAAGACATGGTCGTTCTTGAACAGAAGGTTATTCAACTGACAAGACTGCGGAGGCCCTCTTCGTGTGCATCAAACGCGGAAATACAGCCGATTCCTTATATGACTGACAACCTTCTTTACGACATGGAAAGCAGTACAAGTCCTTCATCTTCCGACTCAGATTGCTTCCCTTCAGAAAGTTCACAACCTCCTCCCCCAACTAGAAAACATGAGATTCATCGTATACAAATTAGCGAGCCCTGTTTAACAAGAACCCAGAAATCAGCTACTAAGAAGAGACCTTCAACATCAGATTCCCGCTCAAAACCTCAGGTGGCAACCCCTCTGAAAGAACTATCGATGAACAATCGAAAATCAGAAGCCATGTCGACATCATCTAGGCAAAGAGCGGATAAGGTCCGTGCCAGTGGCGATTCCACAAATAGCAGAAGACGCATTCAAACTGTGGCCAAGGACACACCTCAACGAAAGAGGAATATGTAG MEDQDALENVFRSFPTLVSFSSPVHTPSQRRLSSSFTHPRPPVPAARRLAWVSLQGRLVNAEQASSVRSIRGSFGPDEAIAWQLFSPIERFLIVAVIGVAVSESKKNHQIGQLQRAVELRDQVLLSMQQKLDDLCDQVIPIKDHCRTENDMGSRKNVDLADSGAFGDDKIKFVDCGCWICDQHHHLFSGLEQCNTATKPSCGAEMLQYKMPLMNEAEQEERRMSDLSDWASSVTSAADNDMQMNTLSIEQDMLFLKKDCNEKDATIKELTNLLHSAEVSGSQRMSELEDIIRRKNMIISKLKKDMVVLEQKVIQLTRLRRPSSCASNAEIQPIPYMTDNLLYDMESSTSPSSSDSDCFPSESSQPPPPTRKHEIHRIQISEPCLTRTQKSATKKRPSTSDSRSKPQVATPLKELSMNNRKSEAMSTSSRQRADKVRASGDSTNSRRRIQTVAKDTPQRKRNM
BLAST of Cp4.1LG05g04990 vs. TrEMBL
Match: A0A0A0L0N0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G290730 PE=4 SV=1) HSP 1 Score: 661.4 bits (1705), Expect = 8.2e-187 Identity = 365/470 (77.66%), Postives = 400/470 (85.11%), Query Frame = 1
BLAST of Cp4.1LG05g04990 vs. TrEMBL
Match: W9QQ02_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007965 PE=4 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 3.0e-112 Identity = 251/467 (53.75%), Postives = 319/467 (68.31%), Query Frame = 1
BLAST of Cp4.1LG05g04990 vs. TrEMBL
Match: A0A061GRT6_THECC (Golgin subfamily A member 4, putative OS=Theobroma cacao GN=TCM_040557 PE=4 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 5.6e-111 Identity = 257/465 (55.27%), Postives = 324/465 (69.68%), Query Frame = 1
BLAST of Cp4.1LG05g04990 vs. TrEMBL
Match: M5VXT8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004532mg PE=4 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 1.2e-108 Identity = 233/409 (56.97%), Postives = 295/409 (72.13%), Query Frame = 1
BLAST of Cp4.1LG05g04990 vs. TrEMBL
Match: B9GW79_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s22270g PE=4 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 7.1e-106 Identity = 247/469 (52.67%), Postives = 319/469 (68.02%), Query Frame = 1
BLAST of Cp4.1LG05g04990 vs. TAIR10
Match: AT5G12930.1 (AT5G12930.1 unknown protein) HSP 1 Score: 302.8 bits (774), Expect = 3.7e-82 Identity = 196/437 (44.85%), Postives = 270/437 (61.78%), Query Frame = 1
BLAST of Cp4.1LG05g04990 vs. NCBI nr
Match: gi|778693136|ref|XP_011653583.1| (PREDICTED: uncharacterized protein LOC101212475 isoform X1 [Cucumis sativus]) HSP 1 Score: 667.5 bits (1721), Expect = 1.6e-188 Identity = 366/470 (77.87%), Postives = 401/470 (85.32%), Query Frame = 1
BLAST of Cp4.1LG05g04990 vs. NCBI nr
Match: gi|778693140|ref|XP_011653584.1| (PREDICTED: uncharacterized protein LOC101212475 isoform X2 [Cucumis sativus]) HSP 1 Score: 661.4 bits (1705), Expect = 1.2e-186 Identity = 365/470 (77.66%), Postives = 400/470 (85.11%), Query Frame = 1
BLAST of Cp4.1LG05g04990 vs. NCBI nr
Match: gi|659097651|ref|XP_008449739.1| (PREDICTED: uncharacterized protein LOC103491531 [Cucumis melo]) HSP 1 Score: 659.4 bits (1700), Expect = 4.5e-186 Identity = 366/473 (77.38%), Postives = 401/473 (84.78%), Query Frame = 1
BLAST of Cp4.1LG05g04990 vs. NCBI nr
Match: gi|1009118555|ref|XP_015875922.1| (PREDICTED: uncharacterized protein LOC107412625 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 424.5 bits (1090), Expect = 2.4e-115 Identity = 261/462 (56.49%), Postives = 325/462 (70.35%), Query Frame = 1
BLAST of Cp4.1LG05g04990 vs. NCBI nr
Match: gi|703082542|ref|XP_010091981.1| (hypothetical protein L484_007965 [Morus notabilis]) HSP 1 Score: 413.7 bits (1062), Expect = 4.3e-112 Identity = 251/467 (53.75%), Postives = 319/467 (68.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |