Cp4.1LG05g04750 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG05g04750
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Crt
Location	Cp4.1LG05 : 2766104 .. 2774311 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACGACGAGCCTTCGAACATTGAAGGGAGGAACGCGGGGCATCGTCCAGAGACTACAAGTCCCGAAGGACGAGAACTGAAACTCGTCTCCTTCTCTTCGAATTTTCCGGCCATAAATTCATCACATATTGTATTATGACATCATGGACCCGCCGGTTTTCCGCCGGCGCCGACTCATTCGGCGTTTCTTTTCGATTACGGCAACAACCACGAAGCTTGGCTGAGGTTTCTCACCTCAGCATTTACAGGTACGCTGGTTTACGATCTGGTTGCGGATGTGTAGTTCTACGGGCGCCGAAGCACCGGCGGCTACAGGCGGCGGAGCCGTCGGCAGCGTGGGATCGATCGGAGAGTGGAGAGGAGGATAGGGTGAAGCCTTGTTCGTACGCAGTGGGAGGGCAGAGGGTGGAGGATTTGGCGGAGGGGAATAGCGGTGAGATCTTGGAGAAAATTAGGGCGGAGAAATTGAGGAGAAGTAATCGGAAGGTGGAGATTGTGATTGCAGCCGTGTTAACGGTGATTTTCGGTGTGGCTAATCGGGTGCTGTACAAGCTTGCTTTGATTCCCCTGAAGCACTATCCGTTCTTCCTCGCACAGCTCGCCACTTTCGGGTACTTGCCGCCATTTTCTCTCCACTTTTTTCTGCTATTATTCAGTACCACCTAATTTTTCTTCAATTAATTCAAACATAATTACCGTCGAGTTTATAGAATATTTCCGATATCTGAATTTAATGCTTAGATTTGTGGTTGTTCTTGAAGTTCGTTAGGTTTGGTCATTTCTGGCGATCGATCAAATTAAAACCATCATTGTTTTTGCCCTTTAGTTTTCCAGTCCAATAATTGAAAGGGCTGAAGAACAATGTGACGGATGCTTCCTATCCCACGGTTGTTGTGATGGGCACATCCCCCCACACGCCCGAGTTAAATATTTTCCCCCCAATTAATAAAATTATTTCATCTAAATTTTTAAAACTTTCCATAATATTTTTAAACATTCAAAATTAAATAAANGGTTTTTTTTTTTTTTTTTTTTAATCTTGGCGGACAATAGTTAGTCTTTTGTAAAAAATAAATAAAATAAAAATACTACTTTTAAGAGTATAAACATTTTTTAAAATTTATATATATATATATATATTTTTTTTTAAGAGTATTAATGTTATTTTTAAAATATGTACGGCCTATTAATTAGTATACGCTATTAGTATGATGTTATTAAGAGTATTAATAAAAATTTTAAAAGTTCAATAGTATTTTTTAAATCTTTTTGAAATTTTTTAATTTTTTTAATTTTTTTTTTAAAGTTTTAAGAGGATTTTTACACTAAAATATGTACCCGTTTTATTTTTTTAATAGTTTAAGAGTATTTTTTATTCTTATTTTTGAACTTAAAATTTTTAAAGTATTATATTGTAACAAAATTCCTACTAAAACTCTGTAGTTGAGTAATTCTAACCAGTAAAAACAGGGGCGGCTTGAAAATAGGTGTCTGGATTCCTTCGCTCACTCTCGATGCATTTCGTCCTTTCATTAATTATGATCCCTTAAACTGTTTTTTTTTAAATATTATTAAATTGTTATAGAAGTCGTTGTGCATTTGTTCATTGTTGGAGAACATTTGCCTAAAGGTCAGAATTTTTTAAGTTTCGAAAAAGAAAAAAGGTCATATTTTTTTGTTAGTGGACATTTTCTTTATGATCGAATCGAAGGGATTGCGAAGATTCCATGAAACTTTAACGAAAGCTATTATGGGTTTACAAAAAATGAAAGAAAGAAAGGAAAAAATTATTATTTTTTTGTTCGTCTTTAGAATTCATAGGCTTTGAAGGTTGACAAAGTGGGCACATATAATGGTGGGGCCAGTTGGGATGTATATCACATATTATATGCCCCTTGTTAATCATCAAAGGTGAAACGATATCGTTTCATGTTATCCTTTTCCTAATTGCACTTTTCCATTTCCCAGTCACATCCAACAGTCTGTGGCGAGTTTTGCTTCTTTCCTTGTGGTTCTGAGAATGACATATTCGATTTTCGCTTTTCATGTCAATTTCAAATGCTATTGCTGCATGTTATAGGAAGGAAATCCCCATCTTTTTTTATTACTTCATTTGCTTTCTGGTCCCCCAATTAACATAGTTTTATCATAGTCTGCCCCTCTTTTCCTCTTTTTCTCTTTTTTTCCCCTCCCTTTTATCTAATTTAATAAATGAAAAACAAAAATTTGATGTATCTCTTAGTTTGTTCATTTCTGAGAAATCCGTAAAGCCCATGATAAGCATAGAACAAATTTGCCTTTTCACATTTTCACACTATCAGGATTATAGCTTGCCATTTATTTGACTGTTGTTGAAGATGGTTGGGAGGGAGTTCCATATTTTGGCTAATTTAGGGAATCATCGTGAGTTTACAAGTAAAGAATACATTTTCATTAGTATGAGGTCTTTTGAGGAAGTCAAAGCAAAGCCACGAAATGCTCAAAGTGGACAATATTGTATCATTGTGGTGAGTCATGATTCCTAACCTTTAGCCGTCCATTATAAACTAATGCACTAAGTTTGAGCTTTACTGCGTCATACCCACATTTTATAAGTTTAAGAAACTCAATAAATCCGACTTTTTTCTGCTGATTATCATATTAAGGCTGCTGGTTCATTGCATTTGGATTAAATGGATTTCTTTCAATTCTAATCTTTTCAGATATGTAATTGTATACTTCTCCATTTTGTATATGCGCTACCACGCTGGCATTGTTACGGATGAGATGCTTTCAATGCCGAAGGCCCCATATCTTGTTGCTGGCCTCTTGGAAGCTCTTGGCGCTGCGACAGGGATGGCGGCTACAGGTAATGCTTTTTCTTAACAAGTCCCTCACTTCTGCAATGTTCTTATTTTTAAGATATCTATGTTAATCGTATATTAAACATAATTTGGTCATCGTCTATCGTTTATTCTTCATTCTGGATTGAAATGGAGGACTTAAAAGATTAAGATTTGTGATTAATTCAAAAATTCATTTAAGATATAACATTTGTGTTTTAATAGTATGTCTGCACTCATTCAAAATGCTTTTTAAGTATATCATTTGTAGTTTAGTGATTAATTAGCATTCATTAAAAAATGCCACTTAGTATATGATTAGTGTATCTGTTGTTTATAATACTTATTTTAAATTCCTTTAAATTATAATATTTGTGTTTCAATAATGTATCAAGTACTTAACCACCATGGGTTGACCTAGAGGTCAAGAAAGATCATATAAATAATAAATGGCTTAATAAGAACGAGTTCAAGCCATGGTGACTACTACCTAAGATCTAATAGCGAGCGCATGAGTACATGTTCACTACTTATATACGAAATATATAATACATTTGGATAAGTTTAGCCCATTTTTAAACATATATAAATGAAATAGTATTATTGGATTTTCTTTTTTGAAATGTAGCTAAAATATCTGTAATATGCAAATAAATTAGGAACAAGGCCTTTAACTTTTAAAAACAAAAAAACAAAATCATCATCAAAAGGGGCCTAAATTTGTTGCATTTTTCTTAGTATTTTCGGATGCTAATTATTTATTAAGTCAGATATCGTGGCATCTGTTATTGTTACAAATTTGTAATTTGAATTCCTTTCAACTAACTCGTTATTTTCCTTTGATCAGCCATTCTTTCTGGTGCATCAACTCCAATTTTGTCTCAGGTAAAGAACAGCGAGCATTTCCCCCTTAATATTAAATCTGTCTCTCGTTTCAAGGACTGCTTGTGCTGAATTAAGTAATGCTATCCTAATAATGGAGCACGTGCATTCTTTTGATTGGATTATTAAACAAACAAGAAGTATTCTAGTTATCATGGTTCATTTTGTTTGCAGACTTTTCTTGTGTGGCAGATTCTCCTGTCAATTATTTTTCTTGGGCGGAGGTACAAGACCAATCAACTTTTTGGGTGCTTTCTTGTTTCCATTGGTGTAGTCATCACCGTGGCGAGGTAATTTTCATTATCGGCCATTAGTACTTCTTCAGGCTCGAAATAACAATTTTATCTTAATTGTTCATTTCCTTTAATTGTGAACGAACAAGTACTGCGGCTAAACTTTGAGACAGTATTTCTAAAGCCTACAACCGACACGACTTACTTTACTTTAACTGATCAAGTGATGTGCTAACAAGGATAAATTCAAGGTGGAGAGAGGGATATTAATTATTTAAAAATATTTATGAACTCTTTTGATAAGTGAAGACTTTGCATGTTGCATTCATTGCTGGAACTATGTTGTTCAATTTAATATCTAGTGAATGATGATAATAATAAAATCTTGCAGCTTATTGGCATTGAAGGTCTTTTACTGATGGGTCAGATATGATAGTATGAATTGGGAAGTTGAGCTTACATGGGGTTATTTATTAACCTCACTGCTTACATGATCTTGAATTTCTAAAAGCAATCTTATAGCCTTCCGACTAACTTCTATTAACGACATATTCATAAACTAAATATGGACTAAATAGATCTCTTTTTTTGGATAAGAAACAATTTCGTTGATGATATGAAATTACAAAAGAGGGCAGTGCTCCAATCAATGGACTACACGAAACCTTTCCTATTCGTGAAGAGGGGAGTTATAGCATAACTATTGAGCTATCTGATAGTGTTGAAATCACCACCCAAGAGGCAATAATCGGAACATAAATAGGAAAGTTCAGTGAGTTCTTCCCAGNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGGGTCCAATATGCCTGTCAGCCAAAAAGAGGATCCATCAGCAAGTGAGATGAGAAGAGTTAAAGAAAAAACACCTTTAGTGATCTCTGAAATCGAGTAAGCTGGATCATCCACAAGATGATGATTCACACCGAGACTCCTATGGAATCAAGCACAGTCCAACCAACATCATTGCCACTTCAAATAGATTTGATGAAAAAACGATCAACCCTAGCAACCTTCATTTCGTGGAGAATAACAATTGAAGGATTGTATATGATAATGGCACTTTTGATGAGCGTCCTTTTCTCGCCATCACCCAATCCTCTAGCGCTCCAGGAGAGAATAATCATGTAACATCAATCGACCCACCCATGCTTTTAGAATAGGAAGGTTTGTCATAGTTTAATTTGGATTATAAACTGTTTCCTCTGTTGTTTGCTAAAGCTCATTCTAGTGCATAATCCAATCGTAAAGTTAGACGTTCCAACGTTAGATTATACAAACATAGGTTCCCGAACTTGCGAATAGAATTTCGACCGAAGATGTTTCCTTATACTATTAACTAGTAACTTTTTGTTTCTATAGTTGAATGAGTATTCTTCCATCCTTAGCATGTCTACATGATCATTCTTTACTATTGATTCATGAGAATGCTTTCATCACTTTCATCTGGTTAAGCAGGCAGAATTTTTGCTGTAACCACTTTGCTTGCACGAATTATGTTGTAAGATCATACATTCTGTTTTCCCAAAAGTTTTTTTTGCTGGTCTGTATCTGCAGTGGTTCCAACGCTGGAAATTCCCTGAAGGATGCCGGTATATTTTGGAGCATTTTGATGATAATCTCATTCTTGTTCCAAGCAGCTGATACTGTTTTGAAGGTAGTTTGTGGCAAAATAATAGTTGGTTTCCCTGTTGAATTCGTCTGTTGTTTATTTGACAATGAAATTTTTTGTATGTAGGAAATCATCTTCTTGAATGCTTCCCGTCAATTGAAGGTAAGAAACAATTATCTGCCTGATTAAATTTTTTACATTTTTTTAAGAAAGTTCTATCTAGTCTGGTCATTAAAATCAAGAGTAGAAAACTGATTTGTAAATCTATCTTTATCCGAAGATTAGACAGAAAACTGGCCTTATGTTTAAACCAATTTAAAAATGCTTGCAGCTTGAGTACATTTATGCATATTTCATATAGTTGAATTGCTTCTGTGCAGGGCAGGACGATGGACTTATTTGTCGTAAATTCCTTTGGATCTGCTTTCCAGGTAGATACATCTGTTCTTGATCCCAAATTTCTTTTCTTCTTTCTATTGTAAATTGAAGATTAAGGAGTTTTGTTTCATGTCAAATGCAGTCAATTTTCGTAGTGGCTCTCCTACCATTCCTGTCGAAGTTATGGGGCATTCCATTTAGTCAACTGCCAAGCTATCTTAGAGATGGCACGGCCTGTTTTCTGAATTATGGTACTTTAAGTGGTAGGTTTGTCTTCATCTCTCATATGTTTCAATTATGGTTCGTTCAAGGGAGCAGAGAATTGATAGTTTTGCATGATGATGCGAGCTTGGACTTTCAAATGCGGTGTTTTTTTAGACACTAAAAGGATTTCTGTTCACAGGATGTGATGGTGCACCACTGCTACCTCTTCTTTTCATTCTTGTAAATATAGGGTTTAACATTTCATTGTTGCATCTCCTCAAGATCTCATCCGCTGTGGTTTCTTCTTTGGCATCCACTTTTTCAGGTACTTCCTCACTTCTCTGCCCATCCTCATGTTACTTTTGCTTATTCTAAACACTCCAACAGCACTATAAGAAATTGAAAACGTTTCTTCTATCTTCTTGTAACAGCCTAAGCCCACCGCTAGCAAATATTGTCCTCTTTGAACTTTCCCTTTCGGGTTTCCCCTCAAGGTTTTTAAAATGCATCTACTAGAGAGGGGTTTCCACACCCTTATAAACAATGTTTCATTTTCCTCCCTAATTGATGTGGCATCTCATAATCCACCCCATTCGGGGCCCAACGTCCTCGCTGGTACTTGTTCTCTCCTCCAATCGATGTGGGACCCCCCAATCCATCCTCCTTTGGGACCTAGCGTCCTTGCTGGCACACTGCCTCGTGTCCACCTTCCTTCGGGGCTTAGCCTCCTCACTGGCACATCGCCCGGTGTCTGGTTTTGATACCATTTGTAATAGCTCAAGCCCACTGTTAATAGATATTGTCCTCTTTGAGCTTTCCCTTTCGGGGTTCCCCTCAAGGTTTCTAAAACGTGTCTACTAGAGAGAGATTTTTACATCTTATAAAAAATATTTCGTTCTCTTCCCCAATCGACGTGGGATCTCACACGTCTTCTCTAGTAAAATCTCCATTCTATGGGGAAGTTGGTCAATCAACTAAACTGACGTGCAAGTTCTTCCCCTAAATAAGGTGGAAAGACATCTTCAAAGTCTGTATGCTGAATTAGGCCTGTAATCAGCTCTTTCAGCCACGTCTAATCTTCAGCCAATCTTGTTATCTTTGTGAAAGTCACCATCTACTGGCATGTTCCGTGTAGTTTTTCTCCATTTACAAGTTACTCGGAACGTACACGTCAAAATTCAGCAATGCCATGATTCACCTTTTCCTTTCATTCTCGTATATCTTTTCATTTATTTATCGTCAGTAACGTTTTCATTTCCACATAAACAGTGCCAATAGCAGTCTATATGTTCACCTTGCCTCTCCCATACATCGGCGTCGCTTCTTCTCTTCCGAAGGGGTTCGTAGCAGGAGCTGTCATTCTCGTTCTGGGCTTGCTGATCTATGCTTGGACACCATCAGGATCATCAAATCCGAACAATGCTTCCTCCCACGCACCAATCACATAAAATTGAAACAAAATATCAGCTTATACACCGTTGCCACGAAGATGCGCAGTGGAGCTCATATGTGCTACAAGTAAGAATACTGATTTTAGTGAGCAAGAACAACTCGTTCTTCCTGTTCTCCTCTTTCATTCTTCCAATAAAAGGTTCAGTCTGCATTGGTTAAGCTCCATGGCTTAACCACTCGAGCATTGGGTGCAGATTTCCTTGATGAACTAGAGGGTCATTTGTAAGTTCATTAGCTTAGCATCATTGAACAGAAAAATTTGATAGGCATACAATTAGTGAGCTGGTGATTTCTGAAGCGCAAGCAGTTTAAGGATAATAGACCTGAGAGCTGCTGCGGTGCAGGCACCACAATTTTCCATGTGTAGTGGGCTGAGGTTGGGAAATGAGGGCCTTGAAAACTGTGTGTAAAAGTAAGTCGTTTTGTAATACTAAATCAGTGTTCTATACGTGAATTTCTTGTAGCAGTTAGTTTGTTCCATTCAATCTCAAAACATTTTCGATTCATGTGCGATAAATTCAGATAAATTCAGTCATGTAGCCACAAAAATTAAGAACTCAATTTTATCTTTCAACTTTCATA

mRNA sequence

TACGACGAGCCTTCGAACATTGAAGGGAGGAACGCGGGGCATCGTCCAGAGACTACAAGTCCCGAAGGACGAGAACTGAAACTCGTCTCCTTCTCTTCGAATTTTCCGGCCATAAATTCATCACATATTGTATTATGACATCATGGACCCGCCGGTTTTCCGCCGGCGCCGACTCATTCGGCGTTTCTTTTCGATTACGGCAACAACCACGAAGCTTGGCTGAGGTTTCTCACCTCAGCATTTACAGGTACGCTGGTTTACGATCTGGTTGCGGATGTGTAGTTCTACGGGCGCCGAAGCACCGGCGGCTACAGGCGGCGGAGCCGTCGGCAGCGTGGGATCGATCGGAGAGTGGAGAGGAGGATAGGGTGAAGCCTTGTTCGTACGCAGTGGGAGGGCAGAGGGTGGAGGATTTGGCGGAGGGGAATAGCGGTGAGATCTTGGAGAAAATTAGGGCGGAGAAATTGAGGAGAAGTAATCGGAAGGTGGAGATTGTGATTGCAGCCGTGTTAACGGTGATTTTCGGTGTGGCTAATCGGGTGCTGTACAAGCTTGCTTTGATTCCCCTGAAGCACTATCCGTTCTTCCTCGCACAGCTCGCCACTTTCGGATATGTAATTGTATACTTCTCCATTTTGTATATGCGCTACCACGCTGGCATTGTTACGGATGAGATGCTTTCAATGCCGAAGGCCCCATATCTTGTTGCTGGCCTCTTGGAAGCTCTTGGCGCTGCGACAGGGATGGCGGCTACAGCCATTCTTTCTGGTGCATCAACTCCAATTTTGTCTCAGACTTTTCTTGTGTGGCAGATTCTCCTGTCAATTATTTTTCTTGGGCGGAGGTACAAGACCAATCAACTTTTTGGGTGCTTTCTTGTTTCCATTGGTGTAGTCATCACCGTGGCGAGTGGTTCCAACGCTGGAAATTCCCTGAAGGATGCCGGTATATTTTGGAGCATTTTGATGATAATCTCATTCTTGTTCCAAGCAGCTGATACTGTTTTGAAGGAAATCATCTTCTTGAATGCTTCCCGTCAATTGAAGGGCAGGACGATGGACTTATTTGTCGTAAATTCCTTTGGATCTGCTTTCCAGTCAATTTTCGTAGTGGCTCTCCTACCATTCCTGTCGAAGTTATGGGGCATTCCATTTAGTCAACTGCCAAGCTATCTTAGAGATGGCACGGCCTGTTTTCTGAATTATGGTACTTTAAGTGGATGTGATGGTGCACCACTGCTACCTCTTCTTTTCATTCTTGTAAATATAGGGTTTAACATTTCATTGTTGCATCTCCTCAAGATCTCATCCGCTGTGGTTTCTTCTTTGGCATCCACTTTTTCAGTGCCAATAGCAGTCTATATGTTCACCTTGCCTCTCCCATACATCGGCGTCGCTTCTTCTCTTCCGAAGGGGTTCGTAGCAGGAGCTGTCATTCTCGTTCTGGGCTTGCTGATCTATGCTTGGACACCATCAGGATCATCAAATCCGAACAATGCTTCCTCCCACGCACCAATCACATAAAATTGAAACAAAATATCAGCTTATACACCGTTGCCACGAAGATGCGCAGTGGAGCTCATATGTGCTACAAGTAAGAATACTGATTTTAGTGAGCAAGAACAACTCGTTCTTCCTGTTCTCCTCTTTCATTCTTCCAATAAAAGGTTCAGTCTGCATTGGTTAAGCTCCATGGCTTAACCACTCGAGCATTGGGTGCAGATTTCCTTGATGAACTAGAGGGTCATTTGTAAGTTCATTAGCTTAGCATCATTGAACAGAAAAATTTGATAGGCATACAATTAGTGAGCTGGTGATTTCTGAAGCGCAAGCAGTTTAAGGATAATAGACCTGAGAGCTGCTGCGGTGCAGGCACCACAATTTTCCATGTGTAGTGGGCTGAGGTTGGGAAATGAGGGCCTTGAAAACTGTGTGTAAAAGTAAGTCGTTTTGTAATACTAAATCAGTGTTCTATACGTGAATTTCTTGTAGCAGTTAGTTTGTTCCATTCAATCTCAAAACATTTTCGATTCATGTGCGATAAATTCAGATAAATTCAGTCATGTAGCCACAAAAATTAAGAACTCAATTTTATCTTTCAACTTTCATA

Coding sequence (CDS)

ATGACATCATGGACCCGCCGGTTTTCCGCCGGCGCCGACTCATTCGGCGTTTCTTTTCGATTACGGCAACAACCACGAAGCTTGGCTGAGGTTTCTCACCTCAGCATTTACAGGTACGCTGGTTTACGATCTGGTTGCGGATGTGTAGTTCTACGGGCGCCGAAGCACCGGCGGCTACAGGCGGCGGAGCCGTCGGCAGCGTGGGATCGATCGGAGAGTGGAGAGGAGGATAGGGTGAAGCCTTGTTCGTACGCAGTGGGAGGGCAGAGGGTGGAGGATTTGGCGGAGGGGAATAGCGGTGAGATCTTGGAGAAAATTAGGGCGGAGAAATTGAGGAGAAGTAATCGGAAGGTGGAGATTGTGATTGCAGCCGTGTTAACGGTGATTTTCGGTGTGGCTAATCGGGTGCTGTACAAGCTTGCTTTGATTCCCCTGAAGCACTATCCGTTCTTCCTCGCACAGCTCGCCACTTTCGGATATGTAATTGTATACTTCTCCATTTTGTATATGCGCTACCACGCTGGCATTGTTACGGATGAGATGCTTTCAATGCCGAAGGCCCCATATCTTGTTGCTGGCCTCTTGGAAGCTCTTGGCGCTGCGACAGGGATGGCGGCTACAGCCATTCTTTCTGGTGCATCAACTCCAATTTTGTCTCAGACTTTTCTTGTGTGGCAGATTCTCCTGTCAATTATTTTTCTTGGGCGGAGGTACAAGACCAATCAACTTTTTGGGTGCTTTCTTGTTTCCATTGGTGTAGTCATCACCGTGGCGAGTGGTTCCAACGCTGGAAATTCCCTGAAGGATGCCGGTATATTTTGGAGCATTTTGATGATAATCTCATTCTTGTTCCAAGCAGCTGATACTGTTTTGAAGGAAATCATCTTCTTGAATGCTTCCCGTCAATTGAAGGGCAGGACGATGGACTTATTTGTCGTAAATTCCTTTGGATCTGCTTTCCAGTCAATTTTCGTAGTGGCTCTCCTACCATTCCTGTCGAAGTTATGGGGCATTCCATTTAGTCAACTGCCAAGCTATCTTAGAGATGGCACGGCCTGTTTTCTGAATTATGGTACTTTAAGTGGATGTGATGGTGCACCACTGCTACCTCTTCTTTTCATTCTTGTAAATATAGGGTTTAACATTTCATTGTTGCATCTCCTCAAGATCTCATCCGCTGTGGTTTCTTCTTTGGCATCCACTTTTTCAGTGCCAATAGCAGTCTATATGTTCACCTTGCCTCTCCCATACATCGGCGTCGCTTCTTCTCTTCCGAAGGGGTTCGTAGCAGGAGCTGTCATTCTCGTTCTGGGCTTGCTGATCTATGCTTGGACACCATCAGGATCATCAAATCCGAACAATGCTTCCTCCCACGCACCAATCACATAA

Protein sequence

MTSWTRRFSAGADSFGVSFRLRQQPRSLAEVSHLSIYRYAGLRSGCGCVVLRAPKHRRLQAAEPSAAWDRSESGEEDRVKPCSYAVGGQRVEDLAEGNSGEILEKIRAEKLRRSNRKVEIVIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYVIVYFSILYMRYHAGIVTDEMLSMPKAPYLVAGLLEALGAATGMAATAILSGASTPILSQTFLVWQILLSIIFLGRRYKTNQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILMIISFLFQAADTVLKEIIFLNASRQLKGRTMDLFVVNSFGSAFQSIFVVALLPFLSKLWGIPFSQLPSYLRDGTACFLNYGTLSGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPIAVYMFTLPLPYIGVASSLPKGFVAGAVILVLGLLIYAWTPSGSSNPNNASSHAPIT

Homology

[Close]

BLAST of Cp4.1LG05g04750 vs. Swiss-Prot
Match: CLT1_ARATH (Protein CLT1, chloroplastic OS=Arabidopsis thaliana GN=CLT1 PE=2 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 2.2e-132
Identity = 254/414 (61.35%), Postives = 320/414 (77.29%), Query Frame = 1


Query: 44  SGCGCVVLRAPKHRRL---QAAEPSAAWDRSESGEEDRVKPCS--YAVGGQRVEDLAEGN 103
           +G   +VLR+ +  RL   +A  P+ +W+ S  G+ED  K  +  YA+GG     +A   
Sbjct: 40  NGAPPIVLRSSRRSRLWLIEAIPPAKSWNGSNDGDEDIKKSDTRNYAIGGTGGHAVAG-- 99

Query: 104 SGEILEKIRAEKLRRSNRKVEIVIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQLATF 163
                         + +R +EIVIAA  T   GV NRVLYKLALIPLK YPFFLAQL+TF
Sbjct: 100 --------------KDDRTMEIVIAAATTAALGVGNRVLYKLALIPLKQYPFFLAQLSTF 159

Query: 164 GYVIVYFSILYMRYHAGIVTDEMLSMPKAPYLVAGLLEALGAATGMAATAILSGASTPIL 223
           GYV VYFSILY RY AGIVT EMLS+PK P+L+ G+LE+L  A GMAA + LSG ST +L
Sbjct: 160 GYVAVYFSILYFRYRAGIVTKEMLSVPKLPFLIVGVLESLALAAGMAAASNLSGPSTTVL 219

Query: 224 SQTFLVWQILLSIIFLGRRYKTNQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILM 283
           SQTFLVWQIL SIIFLGRRY+ NQ+ GC LV+ GV+++VASGS A +S KD GI WS+LM
Sbjct: 220 SQTFLVWQILFSIIFLGRRYRINQILGCTLVAFGVIVSVASGSGAAHSFKDTGILWSLLM 279

Query: 284 IISFLFQAADTVLKEIIFLNASRQLKGRTMDLFVVNSFGSAFQSIFVVALLPFLSKLWGI 343
           + SFL Q ADTV+KE+IFL++ ++LKG ++DLFVVNS+GS FQ I +  LLPFLSKLWGI
Sbjct: 280 VFSFLLQGADTVMKEVIFLDSKKRLKGASLDLFVVNSYGSIFQVICIALLLPFLSKLWGI 339

Query: 344 PFSQLPSYLRDGTACFLNYGT-LSGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSS 403
           PF+QLPSY+RDG ACFLN G+ ++GC+GAPLLP++F+++N+ +NISLL L+KISSAVVSS
Sbjct: 340 PFNQLPSYIRDGGACFLNIGSRITGCEGAPLLPVMFVMMNMAYNISLLRLIKISSAVVSS 399

Query: 404 LASTFSVPIAVYMFTLPLPYIGVASSLPKGFVAGAVILVLGLLIYAWTPSGSSN 452
           LAST SVPIAVY FTLPLPY+GVAS+LP+GFVAG +ILV+G+L+YAWTPS +++
Sbjct: 400 LASTVSVPIAVYCFTLPLPYLGVASTLPRGFVAGTIILVVGMLLYAWTPSTNTS 437

[Close]

BLAST of Cp4.1LG05g04750 vs. Swiss-Prot
Match: CLT3_ARATH (Protein CLT3, chloroplastic OS=Arabidopsis thaliana GN=CLT3 PE=2 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 2.7e-130
Identity = 258/464 (55.60%), Postives = 337/464 (72.63%), Query Frame = 1


Query: 1   MTSWTRRFSAG--ADSFGVSFRLRQQPRSLAEVSHLSIYRYAGLRSGCGCVVLRAPKHRR 60
           M + +RRF+ G  A    V      +P+S++ +    I            + L  P  RR
Sbjct: 1   MATTSRRFTTGLFASITSVKSHSANRPQSISLIRRNHIDHR---------LPLIVPSSRR 60

Query: 61  --LQAAEPSAAWDRSESGEEDRVKP---CSYAVGGQRVEDLAEGNSGEILEKIRAEKLRR 120
             +QAA    +WD  + G E  +K      YA+G   +E    G+S   +  I  E ++ 
Sbjct: 61  WIIQAAR---SWDGFDDGAEAEIKKPGAYGYAIGDNEIE----GSSSSTVHVIDGEHVKT 120

Query: 121 SNRKVEIVIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYVIVYFSILYMRYH 180
           +    EIVI A +T  FGV NRV+YKLAL+PLK YPFFLAQL+TFGYV VY++ILY RY 
Sbjct: 121 A----EIVIWAAVTAAFGVGNRVMYKLALVPLKEYPFFLAQLSTFGYVAVYYTILYFRYR 180

Query: 181 AGIVTDEMLSMPKAPYLVAGLLEALGAATGMAATAILSGASTPILSQTFLVWQILLSIIF 240
           AG VTD MLS+PK+P+L+ G+LEAL AA GMAA A LSG ST +LSQTFLVWQI  SIIF
Sbjct: 181 AGTVTDAMLSVPKSPFLIVGILEALAAAAGMAAAANLSGPSTTVLSQTFLVWQIFFSIIF 240

Query: 241 LGRRYKTNQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILMIISFLFQAADTVLKE 300
           LGRRY  NQ+ GC LV++GV+++VASGS A +SL +AG+ W +LM++SFL Q A TVLKE
Sbjct: 241 LGRRYSVNQILGCTLVALGVIVSVASGSGAAHSLNEAGVLWILLMVLSFLLQGAGTVLKE 300

Query: 301 IIFLNASRQLKGRTMDLFVVNSFGSAFQSIFVVALLPFLSKLWGIPFSQLPSYLRDGTAC 360
           +IF+++ R+LKG ++DLF+VNS+GSAFQ+I +  LLPFLSKLWGIPF+QL +YL+DG  C
Sbjct: 301 VIFIDSQRRLKGASLDLFIVNSYGSAFQAICIALLLPFLSKLWGIPFNQLGTYLKDGAVC 360

Query: 361 FLNYGTLS-GCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPIAVYMFT 420
           FLN GT++ GCDGAP LPLLF+++NIG+NI+LL LLKISSAVVS LAST SVPIAV++FT
Sbjct: 361 FLNNGTITKGCDGAPFLPLLFVIMNIGYNIALLRLLKISSAVVSCLASTVSVPIAVFLFT 420

Query: 421 LPLPYIGVASSLPKGFVAGAVILVLGLLIYAWTPSGSSNPNNAS 457
           +PLPY+GVASSLPKGF+ G +ILVLG+++Y+WTP G+++ +  S
Sbjct: 421 MPLPYLGVASSLPKGFMGGTIILVLGMILYSWTPHGANSSHTDS 444

[Close]

BLAST of Cp4.1LG05g04750 vs. Swiss-Prot
Match: CLT2_ARATH (Protein CLT2, chloroplastic OS=Arabidopsis thaliana GN=CLT2 PE=2 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 8.3e-100
Identity = 189/330 (57.27%), Postives = 250/330 (75.76%), Query Frame = 1


Query: 114 SNRKVEIVIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYVIVYFSILYMRYH 173
           SNR + IV  +V+ V   VANRVLYKLAL+P+K YPFF+AQL TFGYV++YF+ILY R  
Sbjct: 89  SNRNL-IVANSVVIVALAVANRVLYKLALVPMKQYPFFMAQLTTFGYVLIYFTILYTRRR 148

Query: 174 AGIVTDEMLSMPKAPYLVAGLLEALGAATGMAATAILSGASTPILSQTFLVWQILLSIIF 233
            GIVT+EM+ +PK  + + G LEALG ATGMAA A+L G   PIL+QT+LVWQ+L +++ 
Sbjct: 149 LGIVTNEMMDVPKWRFAIIGFLEALGVATGMAAAAMLPGPVIPILNQTYLVWQLLFALLI 208

Query: 234 LGRRYKTNQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILMIISFLFQAADTVLKE 293
           LGRR+  NQ+ GC LV++GVV+ V+SGS A  +L   G  W  +++ S  FQA  +++KE
Sbjct: 209 LGRRFLLNQIAGCLLVAVGVVVAVSSGSGADTTLSGIGFLWPAVLVASAAFQAGASIIKE 268

Query: 294 IIFLNASRQLKGRTMDLFVVNSFGSAFQSIFVVALLPFLSKLWGIPFSQLPSYLRDGTAC 353
            +F +A+++L+G+++D+FVVNSFGS FQ++FV  LLPFLS L GIPF+ LPSYL+DG  C
Sbjct: 269 FVFNDAAKRLEGKSLDIFVVNSFGSGFQALFVFLLLPFLSNLKGIPFASLPSYLKDGAGC 328

Query: 354 FLNYGT-LSGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPIAVYMFT 413
           F N G  +SGCDGAP+LPLL+I  N+ FNISLLHL+KISSA+VSSL    SVP+AVY+ +
Sbjct: 329 FFNTGAKISGCDGAPILPLLYISTNLAFNISLLHLVKISSAIVSSLTMMLSVPLAVYIMS 388

Query: 414 LPLPYIGVASSLPKGFVAGAVILVLGLLIY 443
            PLPY+   SSL   F  G ++LVLGLL+Y
Sbjct: 389 KPLPYLPGGSSLSSNFTMGCIVLVLGLLLY 417

[Close]

BLAST of Cp4.1LG05g04750 vs. Swiss-Prot
Match: CRTP1_DICDI (Crt homolog 1 OS=Dictyostelium discoideum GN=crtp1 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.5e-19
Identity = 100/363 (27.55%), Postives = 165/363 (45.45%), Query Frame = 1


Query: 109 EKLRRSNRK--VEIVIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYVIVYFS 168
           +K++ S  K  + I+I  VL V  GV N VL K  +    +Y FFL+QL  FGYV ++ +
Sbjct: 39  QKIKNSMSKETITILIYVVLYVTSGVINSVLLKKVMNKFTNYAFFLSQLTNFGYVPIFGA 98

Query: 169 I-LYMRYHAGIVTDEMLSMPKAPYLVAGLLEALGAATGMAATAILSGASTPILSQTFLVW 228
           +  Y  +    +  E    P   + + G L+A+     +      SG    +L+Q  + +
Sbjct: 99  VTAYKIFFTKDIPQETRDFPTRKFAIMGALDAITGFFVVIGGVSTSGPLQQLLNQAIIPF 158

Query: 229 QILLSIIFLGRRYKTNQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILMIISFLFQ 288
            ++ S IFL  RY   QL G  LV IG V+T    S  G S      FW+   ++S +  
Sbjct: 159 TMIASFIFLKERYSLIQLGGA-LVIIGGVVTSLIPSLLGGSSGGNKPFWNFFYLLSVIPG 218

Query: 289 AADTVLKEIIFLNASRQLKGRTMDLFVVNSFGSAFQSIFVVALLP---FLSKLWGIPFSQ 348
           A   V K+I F   +       MD++ +  + S +QSIF + L P   +L     + F Q
Sbjct: 219 ALSNVYKDIGFQAVA------DMDVWYLQYWDSLYQSIFGLFLFPVNNWLPPPATVKFEQ 278

Query: 349 LPSYLRDGTACFLNYG--------------------------TLSGCDGAPLLPLLFILV 408
           +  ++++G  C                               T   C  A ++ +L++ +
Sbjct: 279 ILPFMKEGAECLAGINSIIPSYINGTSSFTATSCTYAPDATITCDDCHNAWIVIILYMTI 338

Query: 409 NIGFNISLLHLLKISSAVVSSLASTFSVPIAVYMFTLPLPYIGVASSLPKGFVAGAVILV 440
           NI +NI +L +LK + A V S+A+T  +P+   +F++        S      VAG VI++
Sbjct: 339 NIIYNIFILLVLKHAGATVYSIANTLRLPLTNIVFSIHFIMGSAVSPFSGLSVAGLVIIL 394

[Close]

BLAST of Cp4.1LG05g04750 vs. Swiss-Prot
Match: CRTP2_DICDI (Crt homolog 2 OS=Dictyostelium discoideum GN=crtp2 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.6e-18
Identity = 97/355 (27.32%), Postives = 169/355 (47.61%), Query Frame = 1


Query: 114 SNRKVEIVIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYVIVYFSI-LYMRY 173
           S +   +++  VL ++ GV N +L K  +    +Y FFL QL  +GYV ++ +I LY   
Sbjct: 54  SKQTATVLVYVVLYILSGVINSLLLKKVMNVFTNYGFFLNQLTNYGYVPIFGAIVLYKIL 113

Query: 174 HAGIVTDEMLSMPKAPYLVAGLLEALGAATGMAATAILSGASTPILSQTFLVWQILLSII 233
               +  +  S P+  +++ G L+A+     +      +G    +L+Q+ + + +LLS I
Sbjct: 114 FTNDIPKDTRSFPQWKFVIMGALDAVTGYFVVIGGIKTTGPLQQLLNQSVIPFTMLLSFI 173

Query: 234 FLGRRYKTNQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILMIISFLFQAADTVLK 293
           FL  RY   QL G  ++  GVV+++      GN+  +  +F++   +IS +  A   V K
Sbjct: 174 FLKERYSLIQLGGALIIIGGVVVSLIPSLTGGNTSGNM-LFYNFFYLISMIPYAFSNVYK 233

Query: 294 EIIFLNASRQLKGRTMDLFVVNSFGSAFQSIFVVALLP---FLSKLWGIPFSQLPSYLRD 353
            I F           MD++ +  F + +QS+    L P   +L     + F+Q+   L+ 
Sbjct: 234 AIGFSTV------EDMDVWYLQYFDALYQSLVGTVLFPINNWLPPPSDMKFNQVIPQLKA 293

Query: 354 GTACF---------------------LNYGTLSGCD---GAPLLPLLFILVNIGFNISLL 413
           G  C                       NYG   GCD   GA ++ L+++ VN+ +N+ +L
Sbjct: 294 GGKCLGGINTLIEQYNSTTGELLPTSCNYGDNLGCDNCHGAWVVVLIYMAVNVLYNVFIL 353

Query: 414 HLLKISSAVVSSLASTFSVPIAVYMFTLPLPYIGVASSLPKGF-VAGAVILVLGL 440
            +LK + A V S+A+T  +P+    F+     +G  S+   G  VAG  I++LGL
Sbjct: 354 LVLKHAGATVFSIANTLRLPLTNIAFSFKF-IMGSDSNPFSGLSVAGLCIILLGL 400

[Close]

BLAST of Cp4.1LG05g04750 vs. TrEMBL
Match: A0A0A0KK12_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G430720 PE=4 SV=1)

HSP 1 Score: 767.3 bits (1980), Expect = 1.1e-218
Identity = 402/462 (87.01%), Postives = 430/462 (93.07%), Query Frame = 1


Query: 1   MTSWTRRFSAGADSFGVSFRLRQQPRSLAEVSHLSIYRYAGLRSGCGCVVLRAPKHRRLQ 60
           MTSW+ RFSAG  SFG  FRLRQ+PRSL EVS   IYR   LRSGCGCV+LRAPKHRRL+
Sbjct: 1   MTSWSHRFSAGTASFGGPFRLRQRPRSLPEVS---IYRNDDLRSGCGCVILRAPKHRRLE 60

Query: 61  AAEPSAAWDRSESGEEDRVKPCSYAVGGQRVEDLAEGNSGEILEKIRAEKLRRSNRKVEI 120
           A  PS AWD S+SGEEDRVKPCSYAVG QRVEDLAEG SGEILE IRAEKLRRS+RKVEI
Sbjct: 61  AVAPSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVEI 120

Query: 121 VIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYVIVYFSILYMRYHAGIVTDE 180
           V+AA  TVIFGVANRVLYKLAL+PLKHYPFFLAQLATFGYVIVYFSILY+RYHAGIVTDE
Sbjct: 121 VVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDE 180

Query: 181 MLSMPKAPYLVAGLLEALGAATGMAATAILSGASTPILSQTFLVWQILLSIIFLGRRYKT 240
           MLS PKAPY+VAGLLEALGAATGMAA AILSGAS P+LSQTFLVWQILLS IFLGRRYKT
Sbjct: 181 MLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKT 240

Query: 241 NQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILMIISFLFQAADTVLKEIIFLNAS 300
           +QLFGCF V+IGV+ITVASGSNAGNSLK+AGIFWS+LMIISFLFQAADTVLKEIIFL+AS
Sbjct: 241 SQLFGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDAS 300

Query: 301 RQLKGRTMDLFVVNSFGSAFQSIFVVALLPFLSKLWGIPFSQLPSYLRDGTACFLNYGTL 360
           RQLKGRT+DLFVVNSFGSAFQ++F++ALLPFLSKLWGIPF+QLPSYLRDG ACFLNYG+L
Sbjct: 301 RQLKGRTIDLFVVNSFGSAFQAVFILALLPFLSKLWGIPFTQLPSYLRDGAACFLNYGSL 360

Query: 361 SGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPIAVYMFTLPLPYIGV 420
           SGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPI+VYMFTLPLPYIGV
Sbjct: 361 SGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPISVYMFTLPLPYIGV 420

Query: 421 ASSLPKGFVAGAVILVLGLLIYAWTPSGSSNPNNASSHAPIT 463
           AS+LP GFVAGAVILVLGLLIYAWTPSGSS+ NNA+ H P T
Sbjct: 421 ASALPSGFVAGAVILVLGLLIYAWTPSGSSDTNNATPHVPTT 459

[Close]

BLAST of Cp4.1LG05g04750 vs. TrEMBL
Match: A0A067LFF8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22757 PE=4 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 3.2e-159
Identity = 309/427 (72.37%), Postives = 357/427 (83.61%), Query Frame = 1


Query: 49  VVLRAPKHRR---LQAAEPSAAWDRSESGEE-DRVKPCSYAVGGQ--RVEDLAE--GNSG 108
           ++ R+PKH +   + A  PS  WDRS+ G E ++V PCSY+VG Q   + D+ E  GNS 
Sbjct: 44  IIFRSPKHSKSFIIDAVGPSGVWDRSDGGNEAEKVGPCSYSVGDQVAAIRDVVEKNGNSD 103

Query: 109 EILEKIRAEKLRRS------NRKVEIVIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQ 168
             +E     +   S      N K+E+ +AA  TV+ GV NRVLYKLAL+PLKHYPFFLAQ
Sbjct: 104 RTVEINNIGRRNCSGSKTSKNEKLEVAVAAAATVVLGVGNRVLYKLALVPLKHYPFFLAQ 163

Query: 169 LATFGYVIVYFSILYMRYHAGIVTDEMLSMPKAPYLVAGLLEALGAATGMAATAILSGAS 228
           LATFGYVIVYF+IL MRYHAG+VTDEMLSMPKAP+L+ G LEALGAATGMAA AILSGAS
Sbjct: 164 LATFGYVIVYFTILRMRYHAGLVTDEMLSMPKAPFLLVGFLEALGAATGMAAAAILSGAS 223

Query: 229 TPILSQTFLVWQILLSIIFLGRRYKTNQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFW 288
            PILSQTFLVWQILLSIIFLGRRYK NQL GCFLV+IGV+ITVASGS+AGNS+K+ GIFW
Sbjct: 224 IPILSQTFLVWQILLSIIFLGRRYKINQLLGCFLVAIGVIITVASGSSAGNSVKEVGIFW 283

Query: 289 SILMIISFLFQAADTVLKEIIFLNASRQLKGRTMDLFVVNSFGSAFQSIFVVALLPFLSK 348
           S+LMI SFL QAADTVLKE IFL+A+RQLKG ++DLFVVNSFGSAFQ++F+  LLPF+SK
Sbjct: 284 SLLMIFSFLLQAADTVLKEFIFLDAARQLKGGSVDLFVVNSFGSAFQALFICLLLPFMSK 343

Query: 349 LWGIPFSQLPSYLRDGTACFLNYGTLS-GCDGAPLLPLLFILVNIGFNISLLHLLKISSA 408
           LWGIPFSQLPSYLRDG  CFLN G+LS GCDGAPLLPLLF+LVN+GFNISLLHLLKISSA
Sbjct: 344 LWGIPFSQLPSYLRDGAVCFLNIGSLSGGCDGAPLLPLLFVLVNMGFNISLLHLLKISSA 403

Query: 409 VVSSLASTFSVPIAVYMFTLPLPYIGVASSLPKGFVAGAVILVLGLLIYAWTPSGSSNPN 461
           VVSSLASTFSVPI+VY+FTLPLPY+GVASSLP GFV GA+ILV+GL IYAWTP  +SN +
Sbjct: 404 VVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVTGAIILVMGLFIYAWTPY-NSNSS 463

[Close]

BLAST of Cp4.1LG05g04750 vs. TrEMBL
Match: A0A061GTP6_THECC (CRT-like transporter 3 isoform 1 OS=Theobroma cacao GN=TCM_040902 PE=4 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 1.5e-151
Identity = 300/412 (72.82%), Postives = 346/412 (83.98%), Query Frame = 1


Query: 49  VVLRAPKHRRLQAAEPSAAWDRSESGEEDRVK-------PCSYAVGGQRVEDLAEGNSGE 108
           +VLR  K  R++A  P     RSE G+  +         PCSY VG QRV D        
Sbjct: 47  IVLRLRKCWRVEAVGPVG---RSEGGDGAKKAGPGAGPGPCSYLVGNQRVGD-------R 106

Query: 109 ILEKIRAEKLRRSNRKVEIVIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYV 168
            +E  R E+    NR VE+V+AA +TV+ GV NRVLYKLAL+PLKHYPFFLAQLATFGYV
Sbjct: 107 TVETGRRER----NRAVEVVVAAGVTVVLGVGNRVLYKLALVPLKHYPFFLAQLATFGYV 166

Query: 169 IVYFSILYMRYHAGIVTDEMLSMPKAPYLVAGLLEALGAATGMAATAILSGASTPILSQT 228
           +VYFSILY+RYHAGIVTDEMLSMPKAP+L  GLLEAL AATGMAA AILSGAS PILSQT
Sbjct: 167 LVYFSILYLRYHAGIVTDEMLSMPKAPFLAVGLLEALAAATGMAAGAILSGASIPILSQT 226

Query: 229 FLVWQILLSIIFLGRRYKTNQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILMIIS 288
           FLVWQILLSIIFLGRRY+ NQL GCFLV++GV+ITVASGS +G SLK+AGIFWS+LMI+S
Sbjct: 227 FLVWQILLSIIFLGRRYRVNQLVGCFLVAVGVIITVASGSGSGFSLKEAGIFWSLLMIVS 286

Query: 289 FLFQAADTVLKEIIFLNASRQLKGRTMDLFVVNSFGSAFQSIFVVALLPFLSKLWGIPFS 348
           FL QAADTVLKE+IFLNA+ +L+  ++DLFVVNS+GSAFQ++F+  LLPFLSKLWGIPFS
Sbjct: 287 FLLQAADTVLKEVIFLNAAERLECGSVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFS 346

Query: 349 QLPSYLRDGTACFLNY-GTL-SGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLA 408
           QLP+YL+DG ACFLN  GT+ SGCDGAPLLPLLF++VN+GFNISLLHLLKISSAVVSSLA
Sbjct: 347 QLPNYLKDGAACFLNISGTISSGCDGAPLLPLLFVIVNMGFNISLLHLLKISSAVVSSLA 406

Query: 409 STFSVPIAVYMFTLPLPYIGVASSLPKGFVAGAVILVLGLLIYAWTPSGSSN 452
           STFSVPI+VY+FTLPLPY+GVASSLP GFVAGAV+LVLGLL+YAW+PSGSS+
Sbjct: 407 STFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVVLVLGLLVYAWSPSGSSS 444

[Close]

BLAST of Cp4.1LG05g04750 vs. TrEMBL
Match: A0A0D2RUY6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G124500 PE=4 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 4.2e-151
Identity = 305/459 (66.45%), Postives = 367/459 (79.96%), Query Frame = 1


Query: 1   MTSWTRRFSAGADSFGVSFRLRQQPRSLAEVSHLSIYRYAGLRSGCGCVVLRAPKHRRLQ 60
           MTS+ RR + G+    V     Q+ +   E+    +  +   R   G + LR+ K+ R++
Sbjct: 1   MTSFVRRLTVGSTIPHVPVH-HQKFKPTIEIPAFPLLPHNNQRP-LG-IALRSRKYWRVE 60

Query: 61  AAEPSAAWDRSESGEEDRVK-------PCSYAVGGQRVEDLAEGNSGEILEKIRAEKLRR 120
           A  P     RSE G+  +         PCSY++G +  E          +E+      R 
Sbjct: 61  AVGPVG---RSEGGDGTKKAGGGPGPGPCSYSLGDRTTE----------VER------RE 120

Query: 121 SNRKVEIVIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYVIVYFSILYMRYH 180
            NR VE+V+AA +TV+ GV NRVLYKLAL+PLKHYPFFLAQLATFGYV+VYFS+LY+RYH
Sbjct: 121 RNRTVEVVVAAGVTVVLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVLVYFSVLYLRYH 180

Query: 181 AGIVTDEMLSMPKAPYLVAGLLEALGAATGMAATAILSGASTPILSQTFLVWQILLSIIF 240
           AGIVTDEMLSMPKAP+L  GLLEALGAATGMAA AILSGAS PILSQTFLVWQILLSIIF
Sbjct: 181 AGIVTDEMLSMPKAPFLAVGLLEALGAATGMAAGAILSGASIPILSQTFLVWQILLSIIF 240

Query: 241 LGRRYKTNQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILMIISFLFQAADTVLKE 300
           LGRRY+ NQL GCFLV++GV+I+VASGS++G+SLK+AG+FWS+LMI+SFLFQAADTVLKE
Sbjct: 241 LGRRYRINQLLGCFLVAVGVIISVASGSSSGHSLKEAGMFWSLLMIVSFLFQAADTVLKE 300

Query: 301 IIFLNASRQLKGRTMDLFVVNSFGSAFQSIFVVALLPFLSKLWGIPFSQLPSYLRDGTAC 360
           +IFL+A+++LKG ++DLFVVNS+GSAFQ++F+  LLPFLSKLWGIPFSQLP+YL+DG AC
Sbjct: 301 VIFLDAAQRLKGGSIDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPNYLKDGAAC 360

Query: 361 FLNY-GTLSG-CDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPIAVYMF 420
           FLN  GTLS  CDGAPLLPLLF++VN+GFNISLLHLLKISSAVVSSLASTFSVPI+VY+F
Sbjct: 361 FLNIGGTLSSRCDGAPLLPLLFVIVNMGFNISLLHLLKISSAVVSSLASTFSVPISVYVF 420

Query: 421 TLPLPYIGVASSLPKGFVAGAVILVLGLLIYAWTPSGSS 451
           TLPLPY+GVASSLP GFVAGA+ILV GLLIYAWTPSGS+
Sbjct: 421 TLPLPYLGVASSLPTGFVAGAIILVTGLLIYAWTPSGST 437

[Close]

BLAST of Cp4.1LG05g04750 vs. TrEMBL
Match: A0A151R2R2_CAJCA (Crt isogeny 1 OS=Cajanus cajan GN=KK1_042027 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 1.6e-150
Identity = 288/391 (73.66%), Postives = 329/391 (84.14%), Query Frame = 1


Query: 62  AEPSAAWDRSESGEEDRVKPCSYAVGGQRVEDLAEGNSGEILEKIRAEKLRRSNRKVEIV 121
           A+   AW+RS  GE +R   C  AVG     +LAE                R NR  E+V
Sbjct: 8   AKCGGAWERSGVGEGERAGRCPCAVG-----ELAESGR------------ERRNRSAEVV 67

Query: 122 IAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYVIVYFSILYMRYHAGIVTDEM 181
           +AA +TV+ G  NRVLYKLAL+PLK+YPFFLAQLATFGYVIVYFSILYMRY AGIVTDEM
Sbjct: 68  VAAAVTVVMGAGNRVLYKLALVPLKNYPFFLAQLATFGYVIVYFSILYMRYQAGIVTDEM 127

Query: 182 LSMPKAPYLVAGLLEALGAATGMAATAILSGASTPILSQTFLVWQILLSIIFLGRRYKTN 241
           LSMPK P+LV GLLEALGAATGMAA A+LSGAS PILSQ FLVWQILLS +FLGRRYK N
Sbjct: 128 LSMPKTPFLVVGLLEALGAATGMAAGAMLSGASIPILSQAFLVWQILLSFVFLGRRYKVN 187

Query: 242 QLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILMIISFLFQAADTVLKEIIFLNASR 301
           QL GCFLV+IGV++TVASGS AG+SLK+AGIFWS+LMI+SFLFQAADTVLKEIIFL+A+R
Sbjct: 188 QLLGCFLVAIGVILTVASGSGAGHSLKEAGIFWSLLMIVSFLFQAADTVLKEIIFLDATR 247

Query: 302 QLKGRTMDLFVVNSFGSAFQSIFVVALLPFLSKLWGIPFSQLPSYLRDGTACFLNYGTLS 361
           +LKG ++DLFVVNSFGSAFQ++F+  LLPFLSKLWGIPF QLP+YL+DG ACFLN GTLS
Sbjct: 248 KLKGGSLDLFVVNSFGSAFQALFICLLLPFLSKLWGIPFGQLPNYLKDGAACFLNVGTLS 307

Query: 362 -GCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPIAVYMFTLPLPYIGV 421
            GCDGAPLLPLLF++VN+GFNISLLHLLKISSAVVS LASTFSVPIA+++FTLPLPY+G 
Sbjct: 308 RGCDGAPLLPLLFVIVNMGFNISLLHLLKISSAVVSCLASTFSVPIAIFVFTLPLPYLGA 367

Query: 422 ASSLPKGFVAGAVILVLGLLIYAWTPSGSSN 452
            SSLP GF+AGAVIL++GLLIYAWTPS  S+
Sbjct: 368 PSSLPAGFLAGAVILIMGLLIYAWTPSNGSS 381

[Close]

BLAST of Cp4.1LG05g04750 vs. TAIR10
Match: AT5G12170.2 (AT5G12170.2 CRT (chloroquine-resistance transporter)-like transporter 3)

HSP 1 Score: 466.8 bits (1200), Expect = 1.5e-131
Identity = 258/464 (55.60%), Postives = 337/464 (72.63%), Query Frame = 1


Query: 1   MTSWTRRFSAG--ADSFGVSFRLRQQPRSLAEVSHLSIYRYAGLRSGCGCVVLRAPKHRR 60
           M + +RRF+ G  A    V      +P+S++ +    I            + L  P  RR
Sbjct: 1   MATTSRRFTTGLFASITSVKSHSANRPQSISLIRRNHIDHR---------LPLIVPSSRR 60

Query: 61  --LQAAEPSAAWDRSESGEEDRVKP---CSYAVGGQRVEDLAEGNSGEILEKIRAEKLRR 120
             +QAA    +WD  + G E  +K      YA+G   +E    G+S   +  I  E ++ 
Sbjct: 61  WIIQAAR---SWDGFDDGAEAEIKKPGAYGYAIGDNEIE----GSSSSTVHVIDGEHVKT 120

Query: 121 SNRKVEIVIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYVIVYFSILYMRYH 180
           +    EIVI A +T  FGV NRV+YKLAL+PLK YPFFLAQL+TFGYV VY++ILY RY 
Sbjct: 121 A----EIVIWAAVTAAFGVGNRVMYKLALVPLKEYPFFLAQLSTFGYVAVYYTILYFRYR 180

Query: 181 AGIVTDEMLSMPKAPYLVAGLLEALGAATGMAATAILSGASTPILSQTFLVWQILLSIIF 240
           AG VTD MLS+PK+P+L+ G+LEAL AA GMAA A LSG ST +LSQTFLVWQI  SIIF
Sbjct: 181 AGTVTDAMLSVPKSPFLIVGILEALAAAAGMAAAANLSGPSTTVLSQTFLVWQIFFSIIF 240

Query: 241 LGRRYKTNQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILMIISFLFQAADTVLKE 300
           LGRRY  NQ+ GC LV++GV+++VASGS A +SL +AG+ W +LM++SFL Q A TVLKE
Sbjct: 241 LGRRYSVNQILGCTLVALGVIVSVASGSGAAHSLNEAGVLWILLMVLSFLLQGAGTVLKE 300

Query: 301 IIFLNASRQLKGRTMDLFVVNSFGSAFQSIFVVALLPFLSKLWGIPFSQLPSYLRDGTAC 360
           +IF+++ R+LKG ++DLF+VNS+GSAFQ+I +  LLPFLSKLWGIPF+QL +YL+DG  C
Sbjct: 301 VIFIDSQRRLKGASLDLFIVNSYGSAFQAICIALLLPFLSKLWGIPFNQLGTYLKDGAVC 360

Query: 361 FLNYGTLS-GCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPIAVYMFT 420
           FLN GT++ GCDGAP LPLLF+++NIG+NI+LL LLKISSAVVS LAST SVPIAV++FT
Sbjct: 361 FLNNGTITKGCDGAPFLPLLFVIMNIGYNIALLRLLKISSAVVSCLASTVSVPIAVFLFT 420

Query: 421 LPLPYIGVASSLPKGFVAGAVILVLGLLIYAWTPSGSSNPNNAS 457
           +PLPY+GVASSLPKGF+ G +ILVLG+++Y+WTP G+++ +  S
Sbjct: 421 MPLPYLGVASSLPKGFMGGTIILVLGMILYSWTPHGANSSHTDS 444

[Close]

BLAST of Cp4.1LG05g04750 vs. TAIR10
Match: AT5G19380.2 (AT5G19380.2 CRT (chloroquine-resistance transporter)-like transporter 1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.3e-111
Identity = 201/293 (68.60%), Postives = 251/293 (85.67%), Query Frame = 1


Query: 160 YVIVYFSILYMRYHAGIVTDEMLSMPKAPYLVAGLLEALGAATGMAATAILSGASTPILS 219
           YV VYFSILY RY AGIVT EMLS+PK P+L+ G+LE+L  A GMAA + LSG ST +LS
Sbjct: 205 YVAVYFSILYFRYRAGIVTKEMLSVPKLPFLIVGVLESLALAAGMAAASNLSGPSTTVLS 264

Query: 220 QTFLVWQILLSIIFLGRRYKTNQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILMI 279
           QTFLVWQIL SIIFLGRRY+ NQ+ GC LV+ GV+++VASGS A +S KD GI WS+LM+
Sbjct: 265 QTFLVWQILFSIIFLGRRYRINQILGCTLVAFGVIVSVASGSGAAHSFKDTGILWSLLMV 324

Query: 280 ISFLFQAADTVLKEIIFLNASRQLKGRTMDLFVVNSFGSAFQSIFVVALLPFLSKLWGIP 339
            SFL Q ADTV+KE+IFL++ ++LKG ++DLFVVNS+GS FQ I +  LLPFLSKLWGIP
Sbjct: 325 FSFLLQGADTVMKEVIFLDSKKRLKGASLDLFVVNSYGSIFQVICIALLLPFLSKLWGIP 384

Query: 340 FSQLPSYLRDGTACFLNYGT-LSGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSL 399
           F+QLPSY+RDG ACFLN G+ ++GC+GAPLLP++F+++N+ +NISLL L+KISSAVVSSL
Sbjct: 385 FNQLPSYIRDGGACFLNIGSRITGCEGAPLLPVMFVMMNMAYNISLLRLIKISSAVVSSL 444

Query: 400 ASTFSVPIAVYMFTLPLPYIGVASSLPKGFVAGAVILVLGLLIYAWTPSGSSN 452
           AST SVPIAVY FTLPLPY+GVAS+LP+GFVAG +ILV+G+L+YAWTPS +++
Sbjct: 445 ASTVSVPIAVYCFTLPLPYLGVASTLPRGFVAGTIILVVGMLLYAWTPSTNTS 497

[Close]

BLAST of Cp4.1LG05g04750 vs. TAIR10
Match: AT4G24460.1 (AT4G24460.1 CRT (chloroquine-resistance transporter)-like transporter 2)

HSP 1 Score: 365.5 bits (937), Expect = 4.7e-101
Identity = 189/330 (57.27%), Postives = 250/330 (75.76%), Query Frame = 1


Query: 114 SNRKVEIVIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYVIVYFSILYMRYH 173
           SNR + IV  +V+ V   VANRVLYKLAL+P+K YPFF+AQL TFGYV++YF+ILY R  
Sbjct: 89  SNRNL-IVANSVVIVALAVANRVLYKLALVPMKQYPFFMAQLTTFGYVLIYFTILYTRRR 148

Query: 174 AGIVTDEMLSMPKAPYLVAGLLEALGAATGMAATAILSGASTPILSQTFLVWQILLSIIF 233
            GIVT+EM+ +PK  + + G LEALG ATGMAA A+L G   PIL+QT+LVWQ+L +++ 
Sbjct: 149 LGIVTNEMMDVPKWRFAIIGFLEALGVATGMAAAAMLPGPVIPILNQTYLVWQLLFALLI 208

Query: 234 LGRRYKTNQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILMIISFLFQAADTVLKE 293
           LGRR+  NQ+ GC LV++GVV+ V+SGS A  +L   G  W  +++ S  FQA  +++KE
Sbjct: 209 LGRRFLLNQIAGCLLVAVGVVVAVSSGSGADTTLSGIGFLWPAVLVASAAFQAGASIIKE 268

Query: 294 IIFLNASRQLKGRTMDLFVVNSFGSAFQSIFVVALLPFLSKLWGIPFSQLPSYLRDGTAC 353
            +F +A+++L+G+++D+FVVNSFGS FQ++FV  LLPFLS L GIPF+ LPSYL+DG  C
Sbjct: 269 FVFNDAAKRLEGKSLDIFVVNSFGSGFQALFVFLLLPFLSNLKGIPFASLPSYLKDGAGC 328

Query: 354 FLNYGT-LSGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPIAVYMFT 413
           F N G  +SGCDGAP+LPLL+I  N+ FNISLLHL+KISSA+VSSL    SVP+AVY+ +
Sbjct: 329 FFNTGAKISGCDGAPILPLLYISTNLAFNISLLHLVKISSAIVSSLTMMLSVPLAVYIMS 388

Query: 414 LPLPYIGVASSLPKGFVAGAVILVLGLLIY 443
            PLPY+   SSL   F  G ++LVLGLL+Y
Sbjct: 389 KPLPYLPGGSSLSSNFTMGCIVLVLGLLLY 417

[Close]

BLAST of Cp4.1LG05g04750 vs. NCBI nr
Match: gi|659097485|ref|XP_008449652.1| (PREDICTED: crt homolog 3 [Cucumis melo])

HSP 1 Score: 775.8 bits (2002), Expect = 4.3e-221
Identity = 405/462 (87.66%), Postives = 433/462 (93.72%), Query Frame = 1


Query: 1   MTSWTRRFSAGADSFGVSFRLRQQPRSLAEVSHLSIYRYAGLRSGCGCVVLRAPKHRRLQ 60
           MTSW+ RFS G  SFG  FRLR+QPRSL E   +SIYR A LRSGCGCV+LRAPKHRRL+
Sbjct: 1   MTSWSHRFSGGTASFGGPFRLRKQPRSLPE---MSIYRNADLRSGCGCVILRAPKHRRLE 60

Query: 61  AAEPSAAWDRSESGEEDRVKPCSYAVGGQRVEDLAEGNSGEILEKIRAEKLRRSNRKVEI 120
           A  PS AWD S+SGEEDRVKPCSYAVG QRVEDLAEGNSGEILE IRAEKLRRSNRKVEI
Sbjct: 61  AVAPSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGNSGEILENIRAEKLRRSNRKVEI 120

Query: 121 VIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYVIVYFSILYMRYHAGIVTDE 180
           V+AA LTVIFGVANRVLYKLAL+PLKHYPFFLAQLATFGYVIVYFSILY+RYHAGIVTDE
Sbjct: 121 VVAAALTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDE 180

Query: 181 MLSMPKAPYLVAGLLEALGAATGMAATAILSGASTPILSQTFLVWQILLSIIFLGRRYKT 240
           MLS PKAPY+VAGLLEALGAATGMAA AILSGAS P+LSQTFLVWQILLS IFLGRRYKT
Sbjct: 181 MLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKT 240

Query: 241 NQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILMIISFLFQAADTVLKEIIFLNAS 300
           +QLFGCF V+IGV+ITVASGSNAGNSLK+AGIFWS+LMIISFLFQAADTVLKEIIFL+AS
Sbjct: 241 SQLFGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDAS 300

Query: 301 RQLKGRTMDLFVVNSFGSAFQSIFVVALLPFLSKLWGIPFSQLPSYLRDGTACFLNYGTL 360
           RQLKGRT+DLFVVNSFGSAFQ++F++ALLPFLSKLWGIPF+QLPSYLRDG ACFLNYG+L
Sbjct: 301 RQLKGRTIDLFVVNSFGSAFQAVFILALLPFLSKLWGIPFTQLPSYLRDGAACFLNYGSL 360

Query: 361 SGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPIAVYMFTLPLPYIGV 420
           SGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPI+VYMFTLPLPYIGV
Sbjct: 361 SGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPISVYMFTLPLPYIGV 420

Query: 421 ASSLPKGFVAGAVILVLGLLIYAWTPSGSSNPNNASSHAPIT 463
           AS+LP GFVAGAVILVLGLLIYAWTPSGSS+ NNA+ H PIT
Sbjct: 421 ASALPSGFVAGAVILVLGLLIYAWTPSGSSDTNNATPHVPIT 459

[Close]

BLAST of Cp4.1LG05g04750 vs. NCBI nr
Match: gi|449444865|ref|XP_004140194.1| (PREDICTED: crt homolog 1 [Cucumis sativus])

HSP 1 Score: 767.3 bits (1980), Expect = 1.5e-218
Identity = 402/462 (87.01%), Postives = 430/462 (93.07%), Query Frame = 1


Query: 1   MTSWTRRFSAGADSFGVSFRLRQQPRSLAEVSHLSIYRYAGLRSGCGCVVLRAPKHRRLQ 60
           MTSW+ RFSAG  SFG  FRLRQ+PRSL EVS   IYR   LRSGCGCV+LRAPKHRRL+
Sbjct: 1   MTSWSHRFSAGTASFGGPFRLRQRPRSLPEVS---IYRNDDLRSGCGCVILRAPKHRRLE 60

Query: 61  AAEPSAAWDRSESGEEDRVKPCSYAVGGQRVEDLAEGNSGEILEKIRAEKLRRSNRKVEI 120
           A  PS AWD S+SGEEDRVKPCSYAVG QRVEDLAEG SGEILE IRAEKLRRS+RKVEI
Sbjct: 61  AVAPSGAWDLSDSGEEDRVKPCSYAVGDQRVEDLAEGKSGEILENIRAEKLRRSDRKVEI 120

Query: 121 VIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYVIVYFSILYMRYHAGIVTDE 180
           V+AA  TVIFGVANRVLYKLAL+PLKHYPFFLAQLATFGYVIVYFSILY+RYHAGIVTDE
Sbjct: 121 VVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHAGIVTDE 180

Query: 181 MLSMPKAPYLVAGLLEALGAATGMAATAILSGASTPILSQTFLVWQILLSIIFLGRRYKT 240
           MLS PKAPY+VAGLLEALGAATGMAA AILSGAS P+LSQTFLVWQILLS IFLGRRYKT
Sbjct: 181 MLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQTFLVWQILLSTIFLGRRYKT 240

Query: 241 NQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILMIISFLFQAADTVLKEIIFLNAS 300
           +QLFGCF V+IGV+ITVASGSNAGNSLK+AGIFWS+LMIISFLFQAADTVLKEIIFL+AS
Sbjct: 241 SQLFGCFFVTIGVIITVASGSNAGNSLKEAGIFWSLLMIISFLFQAADTVLKEIIFLDAS 300

Query: 301 RQLKGRTMDLFVVNSFGSAFQSIFVVALLPFLSKLWGIPFSQLPSYLRDGTACFLNYGTL 360
           RQLKGRT+DLFVVNSFGSAFQ++F++ALLPFLSKLWGIPF+QLPSYLRDG ACFLNYG+L
Sbjct: 301 RQLKGRTIDLFVVNSFGSAFQAVFILALLPFLSKLWGIPFTQLPSYLRDGAACFLNYGSL 360

Query: 361 SGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPIAVYMFTLPLPYIGV 420
           SGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPI+VYMFTLPLPYIGV
Sbjct: 361 SGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPISVYMFTLPLPYIGV 420

Query: 421 ASSLPKGFVAGAVILVLGLLIYAWTPSGSSNPNNASSHAPIT 463
           AS+LP GFVAGAVILVLGLLIYAWTPSGSS+ NNA+ H P T
Sbjct: 421 ASALPSGFVAGAVILVLGLLIYAWTPSGSSDTNNATPHVPTT 459

[Close]

BLAST of Cp4.1LG05g04750 vs. NCBI nr
Match: gi|802558873|ref|XP_012065873.1| (PREDICTED: crt homolog 1-like [Jatropha curcas])

HSP 1 Score: 569.7 bits (1467), Expect = 4.6e-159
Identity = 309/427 (72.37%), Postives = 357/427 (83.61%), Query Frame = 1


Query: 49  VVLRAPKHRR---LQAAEPSAAWDRSESGEE-DRVKPCSYAVGGQ--RVEDLAE--GNSG 108
           ++ R+PKH +   + A  PS  WDRS+ G E ++V PCSY+VG Q   + D+ E  GNS 
Sbjct: 44  IIFRSPKHSKSFIIDAVGPSGVWDRSDGGNEAEKVGPCSYSVGDQVAAIRDVVEKNGNSD 103

Query: 109 EILEKIRAEKLRRS------NRKVEIVIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQ 168
             +E     +   S      N K+E+ +AA  TV+ GV NRVLYKLAL+PLKHYPFFLAQ
Sbjct: 104 RTVEINNIGRRNCSGSKTSKNEKLEVAVAAAATVVLGVGNRVLYKLALVPLKHYPFFLAQ 163

Query: 169 LATFGYVIVYFSILYMRYHAGIVTDEMLSMPKAPYLVAGLLEALGAATGMAATAILSGAS 228
           LATFGYVIVYF+IL MRYHAG+VTDEMLSMPKAP+L+ G LEALGAATGMAA AILSGAS
Sbjct: 164 LATFGYVIVYFTILRMRYHAGLVTDEMLSMPKAPFLLVGFLEALGAATGMAAAAILSGAS 223

Query: 229 TPILSQTFLVWQILLSIIFLGRRYKTNQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFW 288
            PILSQTFLVWQILLSIIFLGRRYK NQL GCFLV+IGV+ITVASGS+AGNS+K+ GIFW
Sbjct: 224 IPILSQTFLVWQILLSIIFLGRRYKINQLLGCFLVAIGVIITVASGSSAGNSVKEVGIFW 283

Query: 289 SILMIISFLFQAADTVLKEIIFLNASRQLKGRTMDLFVVNSFGSAFQSIFVVALLPFLSK 348
           S+LMI SFL QAADTVLKE IFL+A+RQLKG ++DLFVVNSFGSAFQ++F+  LLPF+SK
Sbjct: 284 SLLMIFSFLLQAADTVLKEFIFLDAARQLKGGSVDLFVVNSFGSAFQALFICLLLPFMSK 343

Query: 349 LWGIPFSQLPSYLRDGTACFLNYGTLS-GCDGAPLLPLLFILVNIGFNISLLHLLKISSA 408
           LWGIPFSQLPSYLRDG  CFLN G+LS GCDGAPLLPLLF+LVN+GFNISLLHLLKISSA
Sbjct: 344 LWGIPFSQLPSYLRDGAVCFLNIGSLSGGCDGAPLLPLLFVLVNMGFNISLLHLLKISSA 403

Query: 409 VVSSLASTFSVPIAVYMFTLPLPYIGVASSLPKGFVAGAVILVLGLLIYAWTPSGSSNPN 461
           VVSSLASTFSVPI+VY+FTLPLPY+GVASSLP GFV GA+ILV+GL IYAWTP  +SN +
Sbjct: 404 VVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVTGAIILVMGLFIYAWTPY-NSNSS 463

[Close]

BLAST of Cp4.1LG05g04750 vs. NCBI nr
Match: gi|694313895|ref|XP_009368715.1| (PREDICTED: crt homolog 1-like isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 565.1 bits (1455), Expect = 1.1e-157
Identity = 315/464 (67.89%), Postives = 368/464 (79.31%), Query Frame = 1


Query: 7   RFSAGADSFGVSFRLRQQPRSLAEVSHLSIYRYAG--LRSGCGCVVLRAPKHRR----LQ 66
           R  AGA +      +R+ PR   E+SHL  +RY G  LR G       +   RR    L+
Sbjct: 6   RVWAGAGAPDPPICIREPPRLQPEISHLR-HRYYGSILRQGFPLRTTPSEHLRRVTWTLE 65

Query: 67  AAEPSAAWDRSESGE---EDRVKPCSYAVGGQRVEDLAEGNSGEILEKIRAEKLRRSNRK 126
           A     AW+RSE GE     +  PCSYAVG  R            +E+ R+ K    +R+
Sbjct: 66  AVGSRGAWERSEGGEGAESSKAGPCSYAVGEYRAS----------VEQERSSK----DRR 125

Query: 127 VEIVIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYVIVYFSILYMRYHAGIV 186
           V++ +AA +TV+ GV NRVLYKLAL+PLKHYPFFLAQLATFGYVIVYFS+LY+RY AGIV
Sbjct: 126 VDMAVAAAVTVVLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSVLYLRYRAGIV 185

Query: 187 TDEMLSMPKAPYLVAGLLEALGAATGMAATAILSGASTPILSQTFLVWQILLSIIFLGRR 246
           TDEMLSMPKAP+L  GLLEALGAATGMAA AIL GAS P+LSQTFLVWQILLSIIFLGRR
Sbjct: 186 TDEMLSMPKAPFLAVGLLEALGAATGMAAGAILCGASIPVLSQTFLVWQILLSIIFLGRR 245

Query: 247 YKTNQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILMIISFLFQAADTVLKEIIFL 306
           Y+ NQL GC LV+IGV+ITVASGS+AGNSLK+AG+FWS+LMI+SFLFQAADTVLKE+IFL
Sbjct: 246 YRVNQLLGCVLVAIGVIITVASGSSAGNSLKEAGVFWSLLMIVSFLFQAADTVLKEVIFL 305

Query: 307 NASRQLKGRTMDLFVVNSFGSAFQSIFVVALLPFLSKLWGIPFSQLPSYLRDGTACFLNY 366
           +A ++LKGR++DLFVVNSFGSAFQ++F+  LLPFLSKLWGIPF QLPSYL+DG ACFLN 
Sbjct: 306 DARQRLKGRSVDLFVVNSFGSAFQALFICLLLPFLSKLWGIPFGQLPSYLKDGAACFLNM 365

Query: 367 GTLS-GCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPIAVYMFTLPLP 426
           GTLS GCDGAPLLPLLF++VN+GFNISLLHLLKISSAVVSSLASTFSVPI+VY+FTLPLP
Sbjct: 366 GTLSTGCDGAPLLPLLFVIVNMGFNISLLHLLKISSAVVSSLASTFSVPISVYVFTLPLP 425

Query: 427 YIGVASSLPKGFVAGAVILVLGLLIYAWTPSGSSNPNNASSHAP 461
           Y+GVA+SLP GFV+G ++LV+GLLIYAWTP  S  P NAS   P
Sbjct: 426 YLGVAASLPTGFVSGTIVLVIGLLIYAWTP--SVYPTNASPSPP 452

[Close]

BLAST of Cp4.1LG05g04750 vs. NCBI nr
Match: gi|645241841|ref|XP_008227269.1| (PREDICTED: crt homolog 1 [Prunus mume])

HSP 1 Score: 555.1 bits (1429), Expect = 1.2e-154
Identity = 308/453 (67.99%), Postives = 360/453 (79.47%), Query Frame = 1


Query: 6   RRFSAGADSFGVSFRLRQQPRSLAEVSHLSIYRYAGLRSGCGCVVLRAP--KHRR----- 65
           RR  AGA +     R R  PR+ +E+  L+      LR+    +VLR    KH R     
Sbjct: 6   RRVCAGAGAPDRPIRFRGHPRA-SEIPRLAS---KFLRNQRPEIVLRTTPSKHLRKLVWA 65

Query: 66  LQAAEPSAAWDRSESG---EEDRVKPCSYAVGGQRVEDLAEGNSGEILEKIRAEKLRRSN 125
           ++AA P  AWDRS+ G   E  +   CSYAVG  R               +  E  R  +
Sbjct: 66  VEAAGPGGAWDRSDGGDGTESSKAGLCSYAVGEYRT--------------VEQEGARSQD 125

Query: 126 RKVEIVIAAVLTVIFGVANRVLYKLALIPLKHYPFFLAQLATFGYVIVYFSILYMRYHAG 185
           R+V++ +AA +TV+ GV NRVLYKLAL+PLKHYPFFLAQLATFGYVIVYFS+LY+RY AG
Sbjct: 126 RRVDVAVAAAVTVVLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSVLYLRYRAG 185

Query: 186 IVTDEMLSMPKAPYLVAGLLEALGAATGMAATAILSGASTPILSQTFLVWQILLSIIFLG 245
           IVTDEMLSMPKAP+L  GLLEALGA TGMAA AILSGAS P+LSQTFLVWQILLS+IFLG
Sbjct: 186 IVTDEMLSMPKAPFLAVGLLEALGAVTGMAAGAILSGASIPVLSQTFLVWQILLSVIFLG 245

Query: 246 RRYKTNQLFGCFLVSIGVVITVASGSNAGNSLKDAGIFWSILMIISFLFQAADTVLKEII 305
           RRYK NQL GC  V+IGV+ITVASGS+AG+SLK+AGIFWS+LMI+SFLFQAADTVLKE+I
Sbjct: 246 RRYKVNQLLGCCFVAIGVIITVASGSSAGHSLKEAGIFWSLLMIVSFLFQAADTVLKEVI 305

Query: 306 FLNASRQLKGRTMDLFVVNSFGSAFQSIFVVALLPFLSKLWGIPFSQLPSYLRDGTACFL 365
           FL+A ++LKG ++DLFVVNSFGSAFQ+IF+  LLPFLSKLWGIPF QLP+YL+DG ACFL
Sbjct: 306 FLDARQRLKGSSVDLFVVNSFGSAFQAIFICLLLPFLSKLWGIPFGQLPNYLKDGAACFL 365

Query: 366 NYGTL-SGCDGAPLLPLLFILVNIGFNISLLHLLKISSAVVSSLASTFSVPIAVYMFTLP 425
           N GTL SGCDGAPLLPLLF++VN+GFNISLLHLLKISSAV+SSLASTFSVPI+VY+FTLP
Sbjct: 366 NMGTLSSGCDGAPLLPLLFVVVNMGFNISLLHLLKISSAVLSSLASTFSVPISVYVFTLP 425

Query: 426 LPYIGVASSLPKGFVAGAVILVLGLLIYAWTPS 448
           LPY+GVA+SLP GFVAG +ILV+GLLIYAWTPS
Sbjct: 426 LPYLGVAASLPTGFVAGTIILVIGLLIYAWTPS 440

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g04750 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CLT1_ARATH	2.2e-132	61.35	Protein CLT1, chloroplastic OS=Arabidopsis thaliana GN=CLT1 PE=2 SV=1	[more]
CLT3_ARATH	2.7e-130	55.60	Protein CLT3, chloroplastic OS=Arabidopsis thaliana GN=CLT3 PE=2 SV=1	[more]
CLT2_ARATH	8.3e-100	57.27	Protein CLT2, chloroplastic OS=Arabidopsis thaliana GN=CLT2 PE=2 SV=1	[more]
CRTP1_DICDI	1.5e-19	27.55	Crt homolog 1 OS=Dictyostelium discoideum GN=crtp1 PE=2 SV=1	[more]
CRTP2_DICDI	1.6e-18	27.32	Crt homolog 2 OS=Dictyostelium discoideum GN=crtp2 PE=3 SV=1	[more]

BLAST of Cp4.1LG05g04750 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK12_CUCSA	1.1e-218	87.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G430720 PE=4 SV=1	[more]
A0A067LFF8_JATCU	3.2e-159	72.37	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22757 PE=4 SV=1	[more]
A0A061GTP6_THECC	1.5e-151	72.82	CRT-like transporter 3 isoform 1 OS=Theobroma cacao GN=TCM_040902 PE=4 SV=1	[more]
A0A0D2RUY6_GOSRA	4.2e-151	66.45	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G124500 PE=4 SV=1	[more]
A0A151R2R2_CAJCA	1.6e-150	73.66	Crt isogeny 1 OS=Cajanus cajan GN=KK1_042027 PE=4 SV=1	[more]

BLAST of Cp4.1LG05g04750 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12170.2	1.5e-131	55.60	CRT (chloroquine-resistance transporter)-like transporter 3	[more]
AT5G19380.2	1.3e-111	68.60	CRT (chloroquine-resistance transporter)-like transporter 1	[more]
AT4G24460.1	4.7e-101	57.27	CRT (chloroquine-resistance transporter)-like transporter 2	[more]

BLAST of Cp4.1LG05g04750 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097485\|ref\|XP_008449652.1\|	4.3e-221	87.66	PREDICTED: crt homolog 3 [Cucumis melo]	[more]
gi\|449444865\|ref\|XP_004140194.1\|	1.5e-218	87.01	PREDICTED: crt homolog 1 [Cucumis sativus]	[more]
gi\|802558873\|ref\|XP_012065873.1\|	4.6e-159	72.37	PREDICTED: crt homolog 1-like [Jatropha curcas]	[more]
gi\|694313895\|ref\|XP_009368715.1\|	1.1e-157	67.89	PREDICTED: crt homolog 1-like isoform X1 [Pyrus x bretschneideri]	[more]
gi\|645241841\|ref\|XP_008227269.1\|	1.2e-154	67.99	PREDICTED: crt homolog 1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013936	CRT-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g04750.1	Cp4.1LG05g04750.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013936	Chloroquine-resistance transporter-like	PFAM	PF08627	CRT-like	coord: 120..442 score: 6.5
None	No IPR available	PANTHER	PTHR31326	FAMILY NOT NAMED	coord: 1..457 score: 9.2E
None	No IPR available	PANTHER	PTHR31326:SF3	CRT (CHLOROQUINE-RESISTANCE TRANSPORTER)-LIKE TRANSPORTER 1-RELATED	coord: 1..457 score: 9.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG05g04750	Cucsa.086970	Cucumber (Gy14) v1	cgycpeB0161
Cp4.1LG05g04750	CmaCh02G012780	Cucurbita maxima (Rimu)	cmacpeB646
Cp4.1LG05g04750	CmoCh02G013180	Cucurbita moschata (Rifu)	cmocpeB595
Cp4.1LG05g04750	Cla008580	Watermelon (97103) v1	cpewmB723
Cp4.1LG05g04750	Csa6G430720	Cucumber (Chinese Long) v2	cpecuB742
Cp4.1LG05g04750	MELO3C014559	Melon (DHL92) v3.5.1	cpemeB696
Cp4.1LG05g04750	ClCG02G022820	Watermelon (Charleston Gray)	cpewcgB644
Cp4.1LG05g04750	CSPI06G23830	Wild cucumber (PI 183967)	cpecpiB744
Cp4.1LG05g04750	Lsi10G010960	Bottle gourd (USVL1VR-Ls)	cpelsiB598
Cp4.1LG05g04750	MELO3C014559.2	Melon (DHL92) v3.6.1	cpemedB829
Cp4.1LG05g04750	CsaV3_6G038950	Cucumber (Chinese Long) v3	cpecucB0921
Cp4.1LG05g04750	Bhi10G000194	Wax gourd	cpewgoB0944
Cp4.1LG05g04750	CsGy6G023160	Cucumber (Gy14) v2	cgybcpeB845
Cp4.1LG05g04750	Carg02686	Silver-seed gourd	carcpeB1283

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG05g04750	Cucumber (Gy14) v2	cgybcpeB137
Cp4.1LG05g04750	Silver-seed gourd	carcpeB0741
Cp4.1LG05g04750	Cucumber (Chinese Long) v3	cpecucB0877
Cp4.1LG05g04750	Cucurbita pepo (Zucchini)	cpecpeB310
Cp4.1LG05g04750	Cucurbita pepo (Zucchini)	cpecpeB369
Cp4.1LG05g04750	Cucurbita pepo (Zucchini)	cpecpeB493
Cp4.1LG05g04750	Cucurbita maxima (Rimu)	cmacpeB098
Cp4.1LG05g04750	Cucurbita maxima (Rimu)	cmacpeB158
Cp4.1LG05g04750	Cucurbita maxima (Rimu)	cmacpeB586
Cp4.1LG05g04750	Cucurbita moschata (Rifu)	cmocpeB074
Cp4.1LG05g04750	Cucurbita moschata (Rifu)	cmocpeB134
Cp4.1LG05g04750	Cucurbita moschata (Rifu)	cmocpeB535