Cp4.1LG05g03900 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG05g03900
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionHomeobox protein knotted-1, putative
LocationCp4.1LG05 : 1679524 .. 1682979 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTTCTTCTTCTTTCTTTCTTTCTTTCTTCTTTTTTCTCTGTTTGTAAATTTTTCTGAAATTCTCAGAAGTGGTGCAGAAAGTTTCGTGTCTCGGATCCCTATATACCTCCTTCACTCTCTCCTTCCTACAAAACTCTCCCTTCTCCATCACCATTTTCAATCACAAAACCCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCAATCAAAACACCCTCACCTCCTCTTCCTTCCTTCCTTCACTCTTTCGAGTTTTCAAATGCAAGAGCCTGGGTTGGGAATGATGACTGCTGCTGCTGCTGCTGCCGCCGCCTCTACTGCTGCCTTAAGCGCCGACGTTTCCATCTCCGGCGACAACGCCCAACTCAAGGCTGAGATTGCTACTCATCCGCTTTACGAGCAGCTTTTAGCCGCACATGTTGCTTGTCTTCGTGTTGCTACTCCGATTGACCAGCTTCCAATCATCGACGCTCAGTTGGCTCAATCGCACCATGTTTTGCGATCTTATGCCTCTCAGCAGCATCACCAACATGCCCATTCCTTATCGCCTCACGAGCGCCAAGAACTCGACAATTTCCTAGTCAGTTTTTTCACTTTTTGTTTAACTTAAATATTGGTTGAGTTTGGTTTCATTTTGTGATGCTTTTCTTTTTTCTTCAGGCGCAGTATATGATCGTTTTGTGCTCTTTTAAAGACCAGCTTCAGCAACATGTGAGGGTTCACGCAGTGGAAGCTGTTATGGCATGCCGTGAAATTGAAAATACTCTACAAGCTCTTACAGGTATCTCACGTCAATTCCTCCAAAACAAACCCATGATTTTACTTCCAACTTTGAATGTGAAAACCTTGACATAGAACAGTATGCATGATGTTTATTGATCTAAAAAAATTTGATCCATTCGGAGAGATAGGAAAACAACATAAAGAGGAGTATCAAGTAGTTGAGGTATATGGAGATCGGAGGTCGAAATCACTGCACCATATCAAACTAAAAAAAAGGCAAAAAGGGAGTAATTTAAAAGGGCATGGGGTTTGGAGTTGAAGGCAGGCATGGAAGTGGGTGCAAAAGGGCCTACTTCTGAATACCAAGATTGTAGTTGGGAAAAGGATTGGTGTGTTGGGTTCGGTGAGGGTACCACCAATATGGGACACCAACCGATAAGCTTGCTTGCCCTCTCAATACTTGTTCCACTCTAAACAACAATAATATTCCTCTTATTATTATATAATTATTCATCTTTTTTGCTTTCCAAGGATGGATAATACATGAACCTAAGCTCCTCCTTTTCCTCTACATTTAACCTACATGATTACATTACCTTAATCACCAACCGATCATTGTCATTCAAGCTTGCATAATATTTCTGAGGATAAGAAAGTTTTGAAAAAGAAGACAAATCTTTTTAGTTATATGATTAACAAACCATCTGGTGATTGGGGGGGTTAAAGAAACTAGGCAGACAGACATATTATAATAAAGTAATCTGTTGCTTATTGATTGGTTTGCCAGTTTTAGAGCTGCCCACCTACAACCACACTGGTCCCTACATTCTCAATTTCTAAACCAGCATGGAGTTCATGATCAGTTATATTCTGCTTTCTGTGTCTCTCTTTTGAACCCTAGCATTTGTAGAATGCACAGAAACTATTCATTACTGTGCCTGCCAATGGCCGCTGCTGAGCACCTAAGGGGCTGTGGTGTAGGGTCTTGTGTGCAAAGATAAACTTTTATTTACAAGGACCCTAGGCCGCCTAAAGAACCTTGGAGGCTCATCCTGACAGCTCTTAACAAAACTAAATGCCTGCACTTTATGCAGCTTTTTTGGTCTACTAAATTTGGATCCGTTAAAAGAGAATAACACTGCATAACAATGGGTAAGCAAGTCAAACAAGTTATTATCATCATTCAAAATGTTTAGATATTAGTGTCTTTTTTTAATGGAGATTCAAATTCTCTCTTTCTTGTCTGTAATCTACTATACAAGAAACTTAAAAATGCTTTGTTTAATTTAATCTCTGCTGGGTTTTTCTTTTACTGTAAAGTCTTTCATTATCCATCTTTTGCTCGTTGTAGTAGCGTGCATATTAATATCTAAAATTGTCATCTTATTCAAGAAATTGGGGTGGTTTTGAATTGTCACGCCCTCGATTTTACATGACCAATAATGTGTGGCTTTTAATGTCAATTCCAGTCTTGTGGGGGAAGAGGTTGTTAAAAATATAATGAGATCCTTTAAGCACAGTTAGTTGTAGGATGGAACCTTAACTATTGGCACCGTCAAAGTAGTTTAGATCTTTTGCTTTTGTTTAACATTTGATGCATTTCCCATTACCAAACATGGAAAGATGTGCTAATTTACCAACTTTGTATGCTAATTTAACATGGTGCTTAGGAGTGAGCCTTGGTGAAGGAAGTGGTGCAACGATGTCAGACGACGACGACGACGTTCCCATGGAGTTTTCGCTTGATCAATCTGGTGGTGATGCACACGACATGATGGGGTTTGGACCGCTGCTTCCAACCGAATCGGAAAGATCGTTGATGGAGAGGGTTCGACAAGAATTGAAGATTGAGCTAAAACAGGTCCCTTTTATATGGTCTTGCAAATGAAGGGATGGTTTGTTTGGGATTTAGAAGGGGTCAAGAACGTGATGGTATTTTGGTTGCAGGGATTCAAGTCAAGAATTGAGGATGTGAGAGAGGAGATACTGAGAAAAAGAAGGGCAGGGAAGTTGCCTGGTGATACAACCACAGTATTGAAGAACTGGTGGCAGCAGCATTCCAAGTGGCCATACCCAACGGTAAGGAAAAACCAAACCCAACCATTTCATTTCGAAACAAAGAGTTTTAAAGTTGGAATCTCTACAACATCTCGTCTTTCCTTCGCGATTGCAGGAAGACGACAAGGCGAAGCTGGTGGAGGAGACGGGGTTGCAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAATCAGTAACATCCTTGAAGTCAAAGCGCAAGAGATAAGGAAATCATATGATATGTTGTATTGTAGGTTTGGCAAAAGTATGGTCTGACAGAAAATGATGGGATTAGGTTACTGTAAAATGAGGTTAGAGAGATTATTAAGGATTGTGACACAGATTGGATTGGCTTAACATGTTGTCTTTTTTTAAGGTTGTAAATTGTTGCCTTTTTTAACACATCCATTTTTACATTTCTTCTGCTTTCATTTTTTTGGATTTTCTCCCATATTATCCATAATTAATTTTATGAAACCAGGTATTGTTCTTATGTGGTAAATGTTAATTATACGAATCTCATCATTTCTAGGTTAAAAGATTAAATATACTCTTTTCTCTTATTATATAATACACTAATCTGTCACTTTAAATTTAGTTTAGTTTTTTTTTAT

mRNA sequence

CTTCTTCTTCTTCTTTCTTTCTTTCTTTCTTCTTTTTTCTCTGTTTGTAAATTTTTCTGAAATTCTCAGAAGTGGTGCAGAAAGTTTCGTGTCTCGGATCCCTATATACCTCCTTCACTCTCTCCTTCCTACAAAACTCTCCCTTCTCCATCACCATTTTCAATCACAAAACCCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCAATCAAAACACCCTCACCTCCTCTTCCTTCCTTCCTTCACTCTTTCGAGTTTTCAAATGCAAGAGCCTGGGTTGGGAATGATGACTGCTGCTGCTGCTGCTGCCGCCGCCTCTACTGCTGCCTTAAGCGCCGACGTTTCCATCTCCGGCGACAACGCCCAACTCAAGGCTGAGATTGCTACTCATCCGCTTTACGAGCAGCTTTTAGCCGCACATGTTGCTTGTCTTCGTGTTGCTACTCCGATTGACCAGCTTCCAATCATCGACGCTCAGTTGGCTCAATCGCACCATGTTTTGCGATCTTATGCCTCTCAGCAGCATCACCAACATGCCCATTCCTTATCGCCTCACGAGCGCCAAGAACTCGACAATTTCCTAGCGCAGTATATGATCGTTTTGTGCTCTTTTAAAGACCAGCTTCAGCAACATGTGAGGGTTCACGCAGTGGAAGCTGTTATGGCATGCCGTGAAATTGAAAATACTCTACAAGCTCTTACAGGAGTGAGCCTTGGTGAAGGAAGTGGTGCAACGATGTCAGACGACGACGACGACGTTCCCATGGAGTTTTCGCTTGATCAATCTGGTGGTGATGCACACGACATGATGGGGTTTGGACCGCTGCTTCCAACCGAATCGGAAAGATCGTTGATGGAGAGGGTTCGACAAGAATTGAAGATTGAGCTAAAACAGGGATTCAAGTCAAGAATTGAGGATGTGAGAGAGGAGATACTGAGAAAAAGAAGGGCAGGGAAGTTGCCTGGTGATACAACCACAGTATTGAAGAACTGGTGGCAGCAGCATTCCAAGTGGCCATACCCAACGGAAGACGACAAGGCGAAGCTGGTGGAGGAGACGGGGTTGCAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAATCAGTAACATCCTTGAAGTCAAAGCGCAAGAGATAAGGAAATCATATGATATGTTGTATTGTAGGTTTGGCAAAAGTATGGTCTGACAGAAAATGATGGGATTAGGTTACTGTAAAATGAGGTTAGAGAGATTATTAAGGATTGTGACACAGATTGGATTGGCTTAACATGTTGTCTTTTTTTAAGGTTGTAAATTGTTGCCTTTTTTAACACATCCATTTTTACATTTCTTCTGCTTTCATTTTTTTGGATTTTCTCCCATATTATCCATAATTAATTTTATGAAACCAGGTATTGTTCTTATGTGGTAAATGTTAATTATACGAATCTCATCATTTCTAGGTTAAAAGATTAAATATACTCTTTTCTCTTATTATATAATACACTAATCTGTCACTTTAAATTTAGTTTAGTTTTTTTTTAT

Coding sequence (CDS)

ATGCAAGAGCCTGGGTTGGGAATGATGACTGCTGCTGCTGCTGCTGCCGCCGCCTCTACTGCTGCCTTAAGCGCCGACGTTTCCATCTCCGGCGACAACGCCCAACTCAAGGCTGAGATTGCTACTCATCCGCTTTACGAGCAGCTTTTAGCCGCACATGTTGCTTGTCTTCGTGTTGCTACTCCGATTGACCAGCTTCCAATCATCGACGCTCAGTTGGCTCAATCGCACCATGTTTTGCGATCTTATGCCTCTCAGCAGCATCACCAACATGCCCATTCCTTATCGCCTCACGAGCGCCAAGAACTCGACAATTTCCTAGCGCAGTATATGATCGTTTTGTGCTCTTTTAAAGACCAGCTTCAGCAACATGTGAGGGTTCACGCAGTGGAAGCTGTTATGGCATGCCGTGAAATTGAAAATACTCTACAAGCTCTTACAGGAGTGAGCCTTGGTGAAGGAAGTGGTGCAACGATGTCAGACGACGACGACGACGTTCCCATGGAGTTTTCGCTTGATCAATCTGGTGGTGATGCACACGACATGATGGGGTTTGGACCGCTGCTTCCAACCGAATCGGAAAGATCGTTGATGGAGAGGGTTCGACAAGAATTGAAGATTGAGCTAAAACAGGGATTCAAGTCAAGAATTGAGGATGTGAGAGAGGAGATACTGAGAAAAAGAAGGGCAGGGAAGTTGCCTGGTGATACAACCACAGTATTGAAGAACTGGTGGCAGCAGCATTCCAAGTGGCCATACCCAACGGAAGACGACAAGGCGAAGCTGGTGGAGGAGACGGGGTTGCAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAATCAGTAACATCCTTGAAGTCAAAGCGCAAGAGATAA

Protein sequence

MQEPGLGMMTAAAAAAAASTAALSADVSISGDNAQLKAEIATHPLYEQLLAAHVACLRVATPIDQLPIIDAQLAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKDQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSGGDAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR
BLAST of Cp4.1LG05g03900 vs. Swiss-Prot
Match: HD1_BRANA (Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 2.7e-123
Identity = 234/303 (77.23%), Postives = 257/303 (84.82%), Query Frame = 1

Query: 1   MQEPGLGMMTAAAAAAAASTAALSADVSISGDNAQLKAEIATHPLYEQLLAAHVACLRVA 60
           MQE  LGM+ A         AA+ A+      N Q+K EIATHP+Y+QLLAAHVACLRVA
Sbjct: 1   MQEAALGMIGATVGGGGDGDAAVVAE-----QNRQMKGEIATHPMYDQLLAAHVACLRVA 60

Query: 61  TPIDQLPIIDAQLAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKDQ 120
           TPIDQLPII+AQL+ SHH+LRSYAS      A   S H+RQELDNFLAQY++VLCSFK+Q
Sbjct: 61  TPIDQLPIIEAQLSHSHHLLRSYAST-----AVGFSHHDRQELDNFLAQYVMVLCSFKEQ 120

Query: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSGGD-- 180
           LQQHVRVHAVEAVMACREIEN L +LTG +LGEGSGATMS+D+DD+ M+FS D SG D  
Sbjct: 121 LQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLQMDFSSDNSGVDFS 180

Query: 181 -AHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDT 240
             HDM GFGPLLPTESERSLMERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPGDT
Sbjct: 181 GGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDT 240

Query: 241 TTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKS 300
           TTVLKNWWQQH KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NS S+TSLKS
Sbjct: 241 TTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSLKS 293

BLAST of Cp4.1LG05g03900 vs. Swiss-Prot
Match: KNAT7_ARATH (Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7 PE=1 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 4.6e-123
Identity = 236/303 (77.89%), Postives = 256/303 (84.49%), Query Frame = 1

Query: 1   MQEPGLGMMTAAAAAAAASTAALSADVSISGDNAQLKAEIATHPLYEQLLAAHVACLRVA 60
           MQE  LGMM  A       TA       ++  N QLK EIATHP+YEQLLAAHVACLRVA
Sbjct: 1   MQEAALGMM-GATVGGDGDTAV------VAEQNRQLKGEIATHPMYEQLLAAHVACLRVA 60

Query: 61  TPIDQLPIIDAQLAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKDQ 120
           TPIDQLPII+AQL+QSHH+LRSYAS     H      H+R ELDNFLAQY++VLCSFK+Q
Sbjct: 61  TPIDQLPIIEAQLSQSHHLLRSYASTAVGYH------HDRHELDNFLAQYVMVLCSFKEQ 120

Query: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSGGD-- 180
           LQQHVRVHAVEAVMACREIEN L +LTG +LGEGSGATMS+D+DD+PM+FS D SG D  
Sbjct: 121 LQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFS 180

Query: 181 -AHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDT 240
             HDM GFGPLLPTESERSLMERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPGDT
Sbjct: 181 GGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDT 240

Query: 241 TTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKS 300
           TTVLKNWWQQH KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NS S+TSLKS
Sbjct: 241 TTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSLKS 290

BLAST of Cp4.1LG05g03900 vs. Swiss-Prot
Match: KNOS3_ORYSJ (Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica GN=HOS66 PE=2 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 5.6e-113
Identity = 218/293 (74.40%), Postives = 249/293 (84.98%), Query Frame = 1

Query: 10  TAAAAAAAASTAALSADVSISGDNAQLKAEIATHPLYEQLLAAHVACLRVATPIDQLPII 69
           +++A AAAA+ AA +A  + + +   LK EIA HPL EQL+AAHV CLRVATPID LP+I
Sbjct: 27  SSSATAAAAAAAAAAAAAAEAEERQLLKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLI 86

Query: 70  DAQLAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKDQLQQHVRVHA 129
           DAQLAQS  +L SYA+     H   LSPH++QELD+FLAQYM++LCSF++QLQQHVRVHA
Sbjct: 87  DAQLAQSSGLLHSYAAH----HRPFLSPHDKQELDSFLAQYMMLLCSFREQLQQHVRVHA 146

Query: 130 VEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDV-PMEFSLDQSGGDAHDMMGFGPL 189
           VEAVMACREIE +LQ LTG +L EG+GATMS+D+D+  PM       G D HD+MGFGPL
Sbjct: 147 VEAVMACREIEQSLQDLTGATLEEGTGATMSEDEDETAPMLEGPMDMGSDGHDLMGFGPL 206

Query: 190 LPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQH 249
           +PT+SERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT+LK WWQQH
Sbjct: 207 MPTDSERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQH 266

Query: 250 SKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 302
           SKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NSQ+ T LKSKRKR
Sbjct: 267 SKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSQTST-LKSKRKR 314

BLAST of Cp4.1LG05g03900 vs. Swiss-Prot
Match: KNAP3_MALDO (Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.2e-100
Identity = 190/270 (70.37%), Postives = 223/270 (82.59%), Query Frame = 1

Query: 33  NAQLKAEIATHPLYEQLLAAHVACLRVATPIDQLPIIDAQLAQSHHVLRSYASQQHHQHA 92
           NA+ KAEI  HPLYE LL+AHVACLR+ATP+DQLP IDAQLAQS +V+  Y++  +    
Sbjct: 164 NARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGNGMVG 223

Query: 93  HSLSPHERQELDNFLAQYMIVLCSFKDQLQQHVRVHAVEAVMACREIENTLQALTGVSLG 152
                 + +ELD F+  Y+++LCSFK+QLQQHVRVHA+EAVMAC EIE +LQ+LTGVS G
Sbjct: 224 ------DDKELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPG 283

Query: 153 EGSGATMSDDDDD-VPMEFSLDQSGGDAHDMMGFGPLLPTESERSLMERVRQELKIELKQ 212
           EG+ ATMSDD+DD V  + +L   G + HD MGFGPL+PTESERSLMERVRQELK ELKQ
Sbjct: 284 EGTSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQ 343

Query: 213 GFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLK 272
           G+K +I D+REEILRKRRAGKLPGDTT+VLK WWQ HSKWPYPTE+DKA+LV+ETGLQLK
Sbjct: 344 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLK 403

Query: 273 QINNWFINQRKRNWHSNSQSVTSLKSKRKR 302
           QINNWFINQRKRNWHSN  + T LKSKRKR
Sbjct: 404 QINNWFINQRKRNWHSNPSTSTVLKSKRKR 427

BLAST of Cp4.1LG05g03900 vs. Swiss-Prot
Match: KNAT3_ARATH (Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3 PE=1 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.2e-99
Identity = 194/279 (69.53%), Postives = 229/279 (82.08%), Query Frame = 1

Query: 22  ALSADVSISGDNAQLKAEIATHPLYEQLLAAHVACLRVATPIDQLPIIDAQLAQSHHVLR 81
           A +AD  +S  NA+ KAEI +HPLYEQLL+AHVACLR+ATP+DQLP IDAQLAQS HV+ 
Sbjct: 145 ATAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVA 204

Query: 82  SYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKDQLQQHVRVHAVEAVMACREIEN 141
            Y++      A  L   ++ ELD F+  Y+++LCSFK+QLQQHVRVHA+EAVMAC EIE 
Sbjct: 205 KYSALG--AAAQGLVGDDK-ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQ 264

Query: 142 TLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSGGDAHDMMGFGPLLPTESERSLMERV 201
           +LQ+LTGVS GEG GATMSDD+D+  +E   +   G   D++GFGPL+PTESERSLMERV
Sbjct: 265 SLQSLTGVSPGEGMGATMSDDEDE-QVESDANMFDGGL-DVLGFGPLIPTESERSLMERV 324

Query: 202 RQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAK 261
           RQELK ELKQG+K +I D+REEILRKRRAGKLPGDTT+VLK WWQ HSKWPYPTE+DKA+
Sbjct: 325 RQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKAR 384

Query: 262 LVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 301
           LV+ETGLQLKQINNWFINQRKRNWHSN  S T LK+KRK
Sbjct: 385 LVQETGLQLKQINNWFINQRKRNWHSNPSSSTVLKNKRK 418

BLAST of Cp4.1LG05g03900 vs. TrEMBL
Match: A0A0A0KKD3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G156150 PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 8.3e-148
Identity = 276/305 (90.49%), Postives = 291/305 (95.41%), Query Frame = 1

Query: 1   MQEPGLGMMTAAAAAAAASTAALSADVSISGD---NAQLKAEIATHPLYEQLLAAHVACL 60
           MQEPGLGMMT    AA  S+  LS DVS+SG+   N+QLKAEIATHPLYEQLL+AHVACL
Sbjct: 1   MQEPGLGMMT----AAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACL 60

Query: 61  RVATPIDQLPIIDAQLAQSHHVLRSYA-SQQHHQHAHSLSPHERQELDNFLAQYMIVLCS 120
           RVATPIDQLP+IDAQL+QSHH+LRSYA SQQHHQ+AHSL+PHERQELDNFLAQYMIVLCS
Sbjct: 61  RVATPIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCS 120

Query: 121 FKDQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSG 180
           FK+QLQQHVRVHAVEAVMACREIENTLQALTGVSLGEG+GATMSDD+DD+PM+FSLDQSG
Sbjct: 121 FKEQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSG 180

Query: 181 GDAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGD 240
            DAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGD
Sbjct: 181 ADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGD 240

Query: 241 TTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLK 300
           TTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLK
Sbjct: 241 TTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLK 300

Query: 301 SKRKR 302
           SKRKR
Sbjct: 301 SKRKR 301

BLAST of Cp4.1LG05g03900 vs. TrEMBL
Match: A0A061G401_THECC (KNOTTED-like homeobox of 7 OS=Theobroma cacao GN=TCM_016150 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 3.4e-141
Identity = 264/302 (87.42%), Postives = 284/302 (94.04%), Query Frame = 1

Query: 1   MQEPGLGMMTAAAAAAAASTAALSADVSISGD-NAQLKAEIATHPLYEQLLAAHVACLRV 60
           MQEPGLGMM++  + A    +  S +VS+SGD N QL+AEIATHPLYEQLLAAHV+CLRV
Sbjct: 1   MQEPGLGMMSSGGSGAIGGLS--SGEVSVSGDQNRQLRAEIATHPLYEQLLAAHVSCLRV 60

Query: 61  ATPIDQLPIIDAQLAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKD 120
           ATPIDQLP+IDAQLAQSH++LRSYASQ HHQH HSLSPHERQELDNFLAQY+IVLC+FK+
Sbjct: 61  ATPIDQLPLIDAQLAQSHNLLRSYASQ-HHQHGHSLSPHERQELDNFLAQYLIVLCTFKE 120

Query: 121 QLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSGGDA 180
           QLQQHVRVHAVEAVMACREIEN LQALTGVSLGEG+GATMSDD+D++ M+FSLDQSG D 
Sbjct: 121 QLQQHVRVHAVEAVMACREIENNLQALTGVSLGEGTGATMSDDEDELQMDFSLDQSGADG 180

Query: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240
           HD+MGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT
Sbjct: 181 HDLMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240

Query: 241 VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR 300
           VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR
Sbjct: 241 VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR 299

Query: 301 KR 302
           KR
Sbjct: 301 KR 299

BLAST of Cp4.1LG05g03900 vs. TrEMBL
Match: V9P820_GOSHI (KNOX protein OS=Gossypium hirsutum GN=KNL1 PE=2 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 2.4e-139
Identity = 260/302 (86.09%), Postives = 282/302 (93.38%), Query Frame = 1

Query: 1   MQEPGLGMMTAAAAAAAASTAALSADVSISGD-NAQLKAEIATHPLYEQLLAAHVACLRV 60
           MQEPGLGMM++   +      + S +VS+SG+ N QLKAEIA HPLYEQLLAAHV+CLRV
Sbjct: 1   MQEPGLGMMSSGGGSGGIGGLS-SGEVSVSGEQNRQLKAEIAVHPLYEQLLAAHVSCLRV 60

Query: 61  ATPIDQLPIIDAQLAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKD 120
           ATPIDQLP+IDAQLAQSH++LRSYASQ HHQH HSLSPHERQELDNFLAQY+IVLC+FK+
Sbjct: 61  ATPIDQLPLIDAQLAQSHNLLRSYASQ-HHQHGHSLSPHERQELDNFLAQYLIVLCTFKE 120

Query: 121 QLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSGGDA 180
           QLQQHVRVHA+EAVMACREIEN LQALTGV+LGEG+GATMSDD+DD+ M+FSLDQSG D 
Sbjct: 121 QLQQHVRVHAIEAVMACREIENNLQALTGVTLGEGTGATMSDDEDDMQMDFSLDQSGTDG 180

Query: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240
           HD+MGFGPL+PTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT
Sbjct: 181 HDLMGFGPLIPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240

Query: 241 VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR 300
           VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR
Sbjct: 241 VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR 300

Query: 301 KR 302
           KR
Sbjct: 301 KR 300

BLAST of Cp4.1LG05g03900 vs. TrEMBL
Match: A0A0D2S334_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G206600 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 3.2e-139
Identity = 260/302 (86.09%), Postives = 282/302 (93.38%), Query Frame = 1

Query: 1   MQEPGLGMMTAAAAAAAASTAALSADVSISGD-NAQLKAEIATHPLYEQLLAAHVACLRV 60
           MQEPGLGMM++   +      + S +VS+SG+ N QLKAEIA HPLYEQLLAAHV+CLRV
Sbjct: 1   MQEPGLGMMSSGGGSGGIGGLS-SGEVSVSGEQNRQLKAEIAVHPLYEQLLAAHVSCLRV 60

Query: 61  ATPIDQLPIIDAQLAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKD 120
           ATPIDQLP+IDAQLAQSH++LRSYASQ HHQH HSLSPHERQELDNFLAQY+IVLC+FK+
Sbjct: 61  ATPIDQLPLIDAQLAQSHNLLRSYASQ-HHQHGHSLSPHERQELDNFLAQYLIVLCTFKE 120

Query: 121 QLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSGGDA 180
           QLQQHVRVHA+EAVMACREIEN LQALTGV+LGEG+GATMSDD+DD+ M+FSLDQSG D 
Sbjct: 121 QLQQHVRVHAIEAVMACREIENNLQALTGVTLGEGTGATMSDDEDDMQMDFSLDQSGTDG 180

Query: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240
           HD+MGFGPL+PTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT
Sbjct: 181 HDLMGFGPLVPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240

Query: 241 VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR 300
           VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR
Sbjct: 241 VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR 300

Query: 301 KR 302
           KR
Sbjct: 301 KR 300

BLAST of Cp4.1LG05g03900 vs. TrEMBL
Match: A9P848_POPTR (Homeodomain transcription factor family protein OS=Populus trichocarpa GN=POPTR_0001s08550g PE=2 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 1.2e-138
Identity = 258/302 (85.43%), Postives = 280/302 (92.72%), Query Frame = 1

Query: 1   MQEPGLGMMTAAAAAAAASTAALSADVSISGDNA-QLKAEIATHPLYEQLLAAHVACLRV 60
           MQEP LGMM + +  A    ++    VS+SGD + QLKAEIATHPLYEQLL+AHV+CLRV
Sbjct: 1   MQEPNLGMMGSGSGGALGGLSSGEMSVSLSGDQSRQLKAEIATHPLYEQLLSAHVSCLRV 60

Query: 61  ATPIDQLPIIDAQLAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKD 120
           ATPIDQLP+IDAQL+QSHH+LRSYASQ H+QH HSLSPHERQ+LDNFLAQY+I+LC+FKD
Sbjct: 61  ATPIDQLPLIDAQLSQSHHLLRSYASQ-HNQHGHSLSPHERQDLDNFLAQYLIILCTFKD 120

Query: 121 QLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSGGDA 180
           QLQQHVRVHAVEAVMACREIE TLQALTGV+LGEG+GATMSDD+DD+ M+FSLDQS  D 
Sbjct: 121 QLQQHVRVHAVEAVMACREIETTLQALTGVTLGEGTGATMSDDEDDLQMDFSLDQSSADG 180

Query: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240
           HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTT+
Sbjct: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTS 240

Query: 241 VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR 300
           VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR
Sbjct: 241 VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR 300

Query: 301 KR 302
           KR
Sbjct: 301 KR 301

BLAST of Cp4.1LG05g03900 vs. TAIR10
Match: AT1G62990.1 (AT1G62990.1 KNOTTED-like homeobox of Arabidopsis thaliana 7)

HSP 1 Score: 442.2 bits (1136), Expect = 2.6e-124
Identity = 236/303 (77.89%), Postives = 256/303 (84.49%), Query Frame = 1

Query: 1   MQEPGLGMMTAAAAAAAASTAALSADVSISGDNAQLKAEIATHPLYEQLLAAHVACLRVA 60
           MQE  LGMM  A       TA       ++  N QLK EIATHP+YEQLLAAHVACLRVA
Sbjct: 1   MQEAALGMM-GATVGGDGDTAV------VAEQNRQLKGEIATHPMYEQLLAAHVACLRVA 60

Query: 61  TPIDQLPIIDAQLAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKDQ 120
           TPIDQLPII+AQL+QSHH+LRSYAS     H      H+R ELDNFLAQY++VLCSFK+Q
Sbjct: 61  TPIDQLPIIEAQLSQSHHLLRSYASTAVGYH------HDRHELDNFLAQYVMVLCSFKEQ 120

Query: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSGGD-- 180
           LQQHVRVHAVEAVMACREIEN L +LTG +LGEGSGATMS+D+DD+PM+FS D SG D  
Sbjct: 121 LQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFS 180

Query: 181 -AHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDT 240
             HDM GFGPLLPTESERSLMERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPGDT
Sbjct: 181 GGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDT 240

Query: 241 TTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKS 300
           TTVLKNWWQQH KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NS S+TSLKS
Sbjct: 241 TTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSLKS 290

BLAST of Cp4.1LG05g03900 vs. TAIR10
Match: AT5G25220.1 (AT5G25220.1 KNOTTED1-like homeobox gene 3)

HSP 1 Score: 364.4 bits (934), Expect = 6.8e-101
Identity = 194/279 (69.53%), Postives = 229/279 (82.08%), Query Frame = 1

Query: 22  ALSADVSISGDNAQLKAEIATHPLYEQLLAAHVACLRVATPIDQLPIIDAQLAQSHHVLR 81
           A +AD  +S  NA+ KAEI +HPLYEQLL+AHVACLR+ATP+DQLP IDAQLAQS HV+ 
Sbjct: 145 ATAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVA 204

Query: 82  SYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKDQLQQHVRVHAVEAVMACREIEN 141
            Y++      A  L   ++ ELD F+  Y+++LCSFK+QLQQHVRVHA+EAVMAC EIE 
Sbjct: 205 KYSALG--AAAQGLVGDDK-ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQ 264

Query: 142 TLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSGGDAHDMMGFGPLLPTESERSLMERV 201
           +LQ+LTGVS GEG GATMSDD+D+  +E   +   G   D++GFGPL+PTESERSLMERV
Sbjct: 265 SLQSLTGVSPGEGMGATMSDDEDE-QVESDANMFDGGL-DVLGFGPLIPTESERSLMERV 324

Query: 202 RQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAK 261
           RQELK ELKQG+K +I D+REEILRKRRAGKLPGDTT+VLK WWQ HSKWPYPTE+DKA+
Sbjct: 325 RQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKAR 384

Query: 262 LVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 301
           LV+ETGLQLKQINNWFINQRKRNWHSN  S T LK+KRK
Sbjct: 385 LVQETGLQLKQINNWFINQRKRNWHSNPSSSTVLKNKRK 418

BLAST of Cp4.1LG05g03900 vs. TAIR10
Match: AT5G11060.1 (AT5G11060.1 KNOTTED1-like homeobox gene 4)

HSP 1 Score: 357.8 bits (917), Expect = 6.4e-99
Identity = 187/274 (68.25%), Postives = 224/274 (81.75%), Query Frame = 1

Query: 33  NAQLKAEIATHPLYEQLLAAHVACLRVATPIDQLPIIDAQLAQSHHVLRSYASQQHHQHA 92
           NA+ KAEI +HPLYEQLL+AHVACLR+ATP+DQLP IDAQLAQS +V+  Y++ +    A
Sbjct: 120 NARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEA---A 179

Query: 93  HSLSPHERQELDNFLAQYMIVLCSFKDQLQQHVRVHAVEAVMACREIENTLQALTGVSLG 152
             L   + +ELD+F+  Y+++LCSFK+QLQQHVRVHA+EAVMAC EIE +LQ+ TGVS G
Sbjct: 180 QGLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPG 239

Query: 153 EGSGATMSDDDDDVPMEFSLDQSGGDAH------DMMGFGPLLPTESERSLMERVRQELK 212
           EG+GATMS+D+D+        Q   DAH      D +GFGPL+PTESERSLMERVRQELK
Sbjct: 240 EGTGATMSEDEDE--------QVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELK 299

Query: 213 IELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEET 272
            ELKQG+K +I D+REEILRKRRAGKLPGDTT+VLK+WWQ HSKWPYPTE+DKA+LV+ET
Sbjct: 300 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQET 359

Query: 273 GLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 301
           GLQLKQINNWFINQRKRNWHSN  S T  K+KR+
Sbjct: 360 GLQLKQINNWFINQRKRNWHSNPSSSTVSKNKRR 382

BLAST of Cp4.1LG05g03900 vs. TAIR10
Match: AT4G32040.1 (AT4G32040.1 KNOTTED1-like homeobox gene 5)

HSP 1 Score: 334.0 bits (855), Expect = 9.9e-92
Identity = 176/273 (64.47%), Postives = 217/273 (79.49%), Query Frame = 1

Query: 33  NAQLKAEIATHPLYEQLLAAHVACLRVATPIDQLPIIDAQLAQSHHVLRSYASQQHHQHA 92
           +A  KA I  HP+YEQLLAAHVACLRVATP+DQ+P IDAQL+Q H V   Y++       
Sbjct: 115 SASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTLG----- 174

Query: 93  HSLSPHERQELDNFLAQYMIVLCSFKDQLQQHVRVHAVEAVMACREIENTLQALTGVSLG 152
                 + +ELD+F++ Y+++LCSFK+QLQ HV VHA+EA+ AC EIE +LQ+LTGVS  
Sbjct: 175 ---VVVDNKELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPS 234

Query: 153 EGSGATMSDDDDDVPMEFSLDQSGG--DAHD-MMGFGPLLPTESERSLMERVRQELKIEL 212
           E +G TMSDD+DD  +E  ++   G  D  D +MGFGPL+PTE ERSLMERV++ELK EL
Sbjct: 235 ESNGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHEL 294

Query: 213 KQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQ 272
           KQGFK +I D+REEI+RKRRAGKLPGDTT+VLK WW+ HSKWPYPTE+DKAKLV+ETGLQ
Sbjct: 295 KQGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKLVQETGLQ 354

Query: 273 LKQINNWFINQRKRNWHSNSQSVTSL-KSKRKR 302
           LKQINNWFINQRKRNW+SNS + ++L K+KRKR
Sbjct: 355 LKQINNWFINQRKRNWNSNSSTSSTLTKNKRKR 379

BLAST of Cp4.1LG05g03900 vs. TAIR10
Match: AT1G70510.1 (AT1G70510.1 KNOTTED-like from Arabidopsis thaliana 2)

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-27
Identity = 95/274 (34.67%), Postives = 136/274 (49.64%), Query Frame = 1

Query: 16  AAASTAALSADVSISGDNAQL---KAEIATHPLYEQLLAAHVACLRVATPIDQLPIIDAQ 75
           A A ++ L   +  + DN  L   K++IA+HPLY +LL  ++ C +V  P++   I++  
Sbjct: 46  ATALSSELLPRIRKAEDNFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEI 105

Query: 76  LAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKDQLQQHVRVHAVEA 135
             ++H   R  A            P    ELD F+  Y  +L  +K  L +       EA
Sbjct: 106 QRENHVYKRDVAPLS----CFGADP----ELDEFMETYCDILVKYKTDLARPFD----EA 165

Query: 136 VMACREIENTLQAL-TGVSLGEGSGATMSDDDDDVPMEFSLDQSGGDAHDMMGFGPLLPT 195
                +IE  LQ L TG +      AT   DD  V  +  L +    A D          
Sbjct: 166 TTFINKIEMQLQNLCTGPA-----SATALSDDGAVSSDEELREDDDIAAD---------- 225

Query: 196 ESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKW 255
           +S++   +R   +LK +L + F S I  ++ E  +K++ GKLP +    L +WW  H+KW
Sbjct: 226 DSQQRSNDR---DLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKW 285

Query: 256 PYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 286
           PYPTE DK  L EETGL  KQINNWFINQRKR+W
Sbjct: 286 PYPTEGDKISLAEETGLDQKQINNWFINQRKRHW 289

BLAST of Cp4.1LG05g03900 vs. NCBI nr
Match: gi|659073680|ref|XP_008437194.1| (PREDICTED: homeobox protein knotted-1-like 7 [Cucumis melo])

HSP 1 Score: 535.8 bits (1379), Expect = 4.8e-149
Identity = 276/304 (90.79%), Postives = 291/304 (95.72%), Query Frame = 1

Query: 1   MQEPGLGMMTAAAAAAAASTAALSADVSISGD---NAQLKAEIATHPLYEQLLAAHVACL 60
           MQEPGLGMMT    AA  S+  LS DVS+SG+   N+QLKAEIATHPLYEQLL+AHVACL
Sbjct: 1   MQEPGLGMMT----AAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACL 60

Query: 61  RVATPIDQLPIIDAQLAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSF 120
           RVATPIDQLP+IDAQL+QSHH+LRSYASQQHHQ+AHSL+PHERQELDNFLAQYMIVLCSF
Sbjct: 61  RVATPIDQLPMIDAQLSQSHHILRSYASQQHHQNAHSLTPHERQELDNFLAQYMIVLCSF 120

Query: 121 KDQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSGG 180
           K+QLQQHVRVHAVEAVMACREIENTLQALTGVSLGEG+GATMSDD+DD+PM+FSLDQSG 
Sbjct: 121 KEQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGA 180

Query: 181 DAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDT 240
           DAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDT
Sbjct: 181 DAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDT 240

Query: 241 TTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKS 300
           TTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKS
Sbjct: 241 TTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKS 300

Query: 301 KRKR 302
           KRKR
Sbjct: 301 KRKR 300

BLAST of Cp4.1LG05g03900 vs. NCBI nr
Match: gi|449452384|ref|XP_004143939.1| (PREDICTED: homeobox protein knotted-1-like 7 [Cucumis sativus])

HSP 1 Score: 531.2 bits (1367), Expect = 1.2e-147
Identity = 276/305 (90.49%), Postives = 291/305 (95.41%), Query Frame = 1

Query: 1   MQEPGLGMMTAAAAAAAASTAALSADVSISGD---NAQLKAEIATHPLYEQLLAAHVACL 60
           MQEPGLGMMT    AA  S+  LS DVS+SG+   N+QLKAEIATHPLYEQLL+AHVACL
Sbjct: 1   MQEPGLGMMT----AAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACL 60

Query: 61  RVATPIDQLPIIDAQLAQSHHVLRSYA-SQQHHQHAHSLSPHERQELDNFLAQYMIVLCS 120
           RVATPIDQLP+IDAQL+QSHH+LRSYA SQQHHQ+AHSL+PHERQELDNFLAQYMIVLCS
Sbjct: 61  RVATPIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCS 120

Query: 121 FKDQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSG 180
           FK+QLQQHVRVHAVEAVMACREIENTLQALTGVSLGEG+GATMSDD+DD+PM+FSLDQSG
Sbjct: 121 FKEQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSG 180

Query: 181 GDAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGD 240
            DAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGD
Sbjct: 181 ADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGD 240

Query: 241 TTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLK 300
           TTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLK
Sbjct: 241 TTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLK 300

Query: 301 SKRKR 302
           SKRKR
Sbjct: 301 SKRKR 301

BLAST of Cp4.1LG05g03900 vs. NCBI nr
Match: gi|590677690|ref|XP_007040089.1| (KNOTTED-like homeobox of 7 [Theobroma cacao])

HSP 1 Score: 509.2 bits (1310), Expect = 4.9e-141
Identity = 264/302 (87.42%), Postives = 284/302 (94.04%), Query Frame = 1

Query: 1   MQEPGLGMMTAAAAAAAASTAALSADVSISGD-NAQLKAEIATHPLYEQLLAAHVACLRV 60
           MQEPGLGMM++  + A    +  S +VS+SGD N QL+AEIATHPLYEQLLAAHV+CLRV
Sbjct: 1   MQEPGLGMMSSGGSGAIGGLS--SGEVSVSGDQNRQLRAEIATHPLYEQLLAAHVSCLRV 60

Query: 61  ATPIDQLPIIDAQLAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKD 120
           ATPIDQLP+IDAQLAQSH++LRSYASQ HHQH HSLSPHERQELDNFLAQY+IVLC+FK+
Sbjct: 61  ATPIDQLPLIDAQLAQSHNLLRSYASQ-HHQHGHSLSPHERQELDNFLAQYLIVLCTFKE 120

Query: 121 QLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSGGDA 180
           QLQQHVRVHAVEAVMACREIEN LQALTGVSLGEG+GATMSDD+D++ M+FSLDQSG D 
Sbjct: 121 QLQQHVRVHAVEAVMACREIENNLQALTGVSLGEGTGATMSDDEDELQMDFSLDQSGADG 180

Query: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240
           HD+MGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT
Sbjct: 181 HDLMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240

Query: 241 VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR 300
           VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR
Sbjct: 241 VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR 299

Query: 301 KR 302
           KR
Sbjct: 301 KR 299

BLAST of Cp4.1LG05g03900 vs. NCBI nr
Match: gi|1009174552|ref|XP_015868401.1| (PREDICTED: homeobox protein knotted-1-like 7 [Ziziphus jujuba])

HSP 1 Score: 504.6 bits (1298), Expect = 1.2e-139
Identity = 264/302 (87.42%), Postives = 280/302 (92.72%), Query Frame = 1

Query: 1   MQEPGLGMMTAAAAAAAASTAALSADVSISGD-NAQLKAEIATHPLYEQLLAAHVACLRV 60
           MQEPGLGMM AAA        ++S+   + GD + QLKAEIATHPLYEQLL+AHVACLRV
Sbjct: 1   MQEPGLGMM-AAAGGGLGGEVSISSGGGVGGDQHRQLKAEIATHPLYEQLLSAHVACLRV 60

Query: 61  ATPIDQLPIIDAQLAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKD 120
           ATPIDQLP+IDAQL+QSHH+LRSYAS QH Q  HSL PHERQELDNFLAQY+IVLCSFK+
Sbjct: 61  ATPIDQLPLIDAQLSQSHHLLRSYASHQHQQ-PHSLPPHERQELDNFLAQYLIVLCSFKE 120

Query: 121 QLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSGGDA 180
           QLQQHVRVHAVEAVMACREIENTLQALTGVSLGEG+GATMSDD+D++ M+FSLDQSGGD 
Sbjct: 121 QLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDELQMDFSLDQSGGDG 180

Query: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240
           HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT
Sbjct: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240

Query: 241 VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR 300
           VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR
Sbjct: 241 VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR 300

Query: 301 KR 302
           KR
Sbjct: 301 KR 300

BLAST of Cp4.1LG05g03900 vs. NCBI nr
Match: gi|540849835|gb|AGV15454.1| (KNOX protein [Gossypium hirsutum])

HSP 1 Score: 503.1 bits (1294), Expect = 3.5e-139
Identity = 260/302 (86.09%), Postives = 282/302 (93.38%), Query Frame = 1

Query: 1   MQEPGLGMMTAAAAAAAASTAALSADVSISGD-NAQLKAEIATHPLYEQLLAAHVACLRV 60
           MQEPGLGMM++   +      + S +VS+SG+ N QLKAEIA HPLYEQLLAAHV+CLRV
Sbjct: 1   MQEPGLGMMSSGGGSGGIGGLS-SGEVSVSGEQNRQLKAEIAVHPLYEQLLAAHVSCLRV 60

Query: 61  ATPIDQLPIIDAQLAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKD 120
           ATPIDQLP+IDAQLAQSH++LRSYASQ HHQH HSLSPHERQELDNFLAQY+IVLC+FK+
Sbjct: 61  ATPIDQLPLIDAQLAQSHNLLRSYASQ-HHQHGHSLSPHERQELDNFLAQYLIVLCTFKE 120

Query: 121 QLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSGGDA 180
           QLQQHVRVHA+EAVMACREIEN LQALTGV+LGEG+GATMSDD+DD+ M+FSLDQSG D 
Sbjct: 121 QLQQHVRVHAIEAVMACREIENNLQALTGVTLGEGTGATMSDDEDDMQMDFSLDQSGTDG 180

Query: 181 HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240
           HD+MGFGPL+PTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT
Sbjct: 181 HDLMGFGPLIPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTT 240

Query: 241 VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR 300
           VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR
Sbjct: 241 VLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKR 300

Query: 301 KR 302
           KR
Sbjct: 301 KR 300

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
HD1_BRANA2.7e-12377.23Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1[more]
KNAT7_ARATH4.6e-12377.89Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7 PE=1 SV=1[more]
KNOS3_ORYSJ5.6e-11374.40Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica GN=HOS66 PE=2 ... [more]
KNAP3_MALDO3.2e-10070.37Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1[more]
KNAT3_ARATH1.2e-9969.53Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KKD3_CUCSA8.3e-14890.49Uncharacterized protein OS=Cucumis sativus GN=Csa_5G156150 PE=4 SV=1[more]
A0A061G401_THECC3.4e-14187.42KNOTTED-like homeobox of 7 OS=Theobroma cacao GN=TCM_016150 PE=4 SV=1[more]
V9P820_GOSHI2.4e-13986.09KNOX protein OS=Gossypium hirsutum GN=KNL1 PE=2 SV=1[more]
A0A0D2S334_GOSRA3.2e-13986.09Uncharacterized protein OS=Gossypium raimondii GN=B456_004G206600 PE=4 SV=1[more]
A9P848_POPTR1.2e-13885.43Homeodomain transcription factor family protein OS=Populus trichocarpa GN=POPTR_... [more]
Match NameE-valueIdentityDescription
AT1G62990.12.6e-12477.89 KNOTTED-like homeobox of Arabidopsis thaliana 7[more]
AT5G25220.16.8e-10169.53 KNOTTED1-like homeobox gene 3[more]
AT5G11060.16.4e-9968.25 KNOTTED1-like homeobox gene 4[more]
AT4G32040.19.9e-9264.47 KNOTTED1-like homeobox gene 5[more]
AT1G70510.11.3e-2734.67 KNOTTED-like from Arabidopsis thaliana 2[more]
Match NameE-valueIdentityDescription
gi|659073680|ref|XP_008437194.1|4.8e-14990.79PREDICTED: homeobox protein knotted-1-like 7 [Cucumis melo][more]
gi|449452384|ref|XP_004143939.1|1.2e-14790.49PREDICTED: homeobox protein knotted-1-like 7 [Cucumis sativus][more]
gi|590677690|ref|XP_007040089.1|4.9e-14187.42KNOTTED-like homeobox of 7 [Theobroma cacao][more]
gi|1009174552|ref|XP_015868401.1|1.2e-13987.42PREDICTED: homeobox protein knotted-1-like 7 [Ziziphus jujuba][more]
gi|540849835|gb|AGV15454.1|3.5e-13986.09KNOX protein [Gossypium hirsutum][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR008422Homeobox_KN_domain
IPR005541KNOX2
IPR005540KNOX1
IPR005539ELK_dom
IPR001356Homeobox_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045010 actin nucleation
biological_process GO:0007155 cell adhesion
biological_process GO:0071555 cell wall organization
biological_process GO:0010413 glucuronoxylan metabolic process
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:2000652 regulation of secondary cell wall biogenesis
biological_process GO:0048765 root hair cell differentiation
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0045492 xylan biosynthetic process
biological_process GO:0010089 xylem development
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g03900.1Cp4.1LG05g03900.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 226..291
score: 1.4
IPR001356Homeobox domainPROFILEPS50071HOMEOBOX_2coord: 224..287
score: 11
IPR005539ELK domainPROFILEPS51213ELKcoord: 204..224
score: 9
IPR005540KNOX1PFAMPF03790KNOX1coord: 36..77
score: 1.9
IPR005540KNOX1SMARTSM01255KNOX1_2coord: 34..78
score: 2.6
IPR005541KNOX2PFAMPF03791KNOX2coord: 96..147
score: 3.9
IPR005541KNOX2SMARTSM01256KNOX2_2coord: 93..148
score: 5.0
IPR008422Homeobox KN domainPFAMPF05920Homeobox_KNcoord: 244..283
score: 1.0
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 231..289
score: 7.1
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 226..291
score: 4.06
NoneNo IPR availablePANTHERPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORScoord: 32..301
score: 1.0E
NoneNo IPR availablePANTHERPTHR11850:SF74HOMEOBOX PROTEIN KNOTTED-1-LIKE 7coord: 32..301
score: 1.0E

The following gene(s) are paralogous to this gene:

None