Cp4.1LG05g02720 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG05g02720
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
Location	Cp4.1LG05 : 1499145 .. 1500592 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTATGTTTAGGTTGGCGGCAGAACCATTAAAAACGAACGGTTGTCTTTTTACGTTTTGGACGGTTAAGATTTCCCGCCACAGGGAGCTTCATTCGCATACGGATAACGCTGGTGCAGAGTACTGCAGAGTACTACAGAGTGAGACGAGGACCCAAGAACCAGTGGCTGAGAATTGTAATCTTTTCATTTTCACTATTTCACAGAGACCATCAATGGCCGCTCTTAGGTTCGGCTTCACCGCCACCACCATCCACGTTTCATCAACGTCGATTCTCACCCGCACTCGCCCCAACCCAAAGACCATTACCTGCGTCGGATGGGTATCTTTCTAATCTTTCCCTCTTCTTCTTACACTTCCATTTTTCCTTTCCTTATCAGAGATTCGTTCGATTCAGGACCCAGAAGGCATTTTTGGACCGCCTCAGACCGGCCATATCGCTCGAAGAGAGTTCACAAGGCGGCTGGAGAGGGATGCCGAAGCTCGCGAGGCTTTCGAACGCGAAGTCCGGGAAGAGAAAGAACGCCGCCAATTGCTTCGAGCGGTACTTCTAGCAATTGGGGTTTTTCAATTTCATGACTTTTTTCCAATTGGGTTTGTGTTTGTTTCCAAATTTGGAGTGTTGGTCAGTCAAAATTTACTGATTGTTGTATTCATCTCTGTTCATGGATAGTCTCGTGTAGTTCCGAACAACGTGACTGGCCTTATTGAGTATTTTCTTGATACTGAAGCTCAGGATATTGAATTTGAAATCGCCAGGTTAAGGCCCAGGTTAGTGATTGAAACAGGATTCTGATTTTTCCAGTTCTGTTAGCTCAATCAGCTCTGATATCAACATTGTCTGATCATGGCAGGCTGACCGAGGAGTTTTTTTCGAGTATAAAACTTGAGTTGGGAGAGCTTAGATTTGCCGTTAACAAAACTGAGGTCAATTCTTGTCATGTTTTAAAATTTCCTTAGATGAAGATTGATGCCATCACGATAACAACTAAACAAGCAATTCCCTTGATTGTTTAGGCCATGGAAGACAGAGTGATTGAGTTAGAAGCATTACAGAAAGCGCTTGAAGAAGGAATAGGTCTGTCTGAAACCTCAATTCCTCTTTCCCTGGGCTGCTTCATTTGATAACATACTTCATTTAGTTTTGTGTTACAGAAGCGTATGATAAAATGCAAGGCGAACTGGTAAAAGCAAGGGAAGGCTTAACCAAAATTTTAACATCAAAGGATGTAAAAGCTACCGTATGTGTTCTGTTTCTTCTTTCACTCTGCTGTTTATACCTGACTCTGCAACCAAAATGCTGACCATGTCGCTTCTATTCTGTAGTTGTTGGATATGGTGGAACGAAACGAGCTCAATCGATCGCTACTAGCCCTTCTCGACGAAAACATAGCCAATGCGCAAAGCGGTAACCAGGTAATAGCCATTGATGAATTTCTTCTTTCA

mRNA sequence

ATGGTTATGTTGGCGGCAGAACCATTAAAAACGAACGGTTGTCTTTTTACGTTTTGGACGGTTAAGATTTCCCGCCACAGGGAGCTTCATTCGCATACGGATAACGCTGGTGCAGAGTACTGCAGAGTACTACAGAGTGAGACGAGGACCCAAGAACCAGTGGCTGAGAATTGTAATCTTTTCATTTTCACTATTTCACAGAGACCATCAATGGCCGCTCTTAGGTTCGGCTTCACCGCCACCACCATCCACGTTTCATCAACGTCGATTCTCACCCGCACTCGCCCCAACCCAAAGACCATTACCTGCGTCGGATGGGACCCAGAAGGCATTTTTGGACCGCCTCAGACCGGCCATATCGCTCGAAGAGAGTTCACAAGGCGGCTGGAGAGGGATGCCGAAGCTCGCGAGGCTTTCGAACGCGAAGTCCGGGAAGAGAAAGAACGCCGCCAATTGCTTCGAGCGTCTCGTGTAGTTCCGAACAACGTGACTGGCCTTATTGAGTATTTTCTTGATACTGAAGCTCAGGATATTGAATTTGAAATCGCCAGGTTAAGGCCCAGGCTGACCGAGGAGTTTTTTTCGAGTATAAAACTTGAGTTGGGAGAGCTTAGATTTGCCGTTAACAAAACTGAGGCCATGGAAGACAGAGTGATTGAGTTAGAAGCATTACAGAAAGCGCTTGAAGAAGGAATAGAAGCGTATGATAAAATGCAAGGCGAACTGGTAAAAGCAAGGGAAGGCTTAACCAAAATTTTAACATCAAAGGATGTAAAAGCTACCTTGTTGGATATGGTGGAACGAAACGAGCTCAATCGATCGCTACTAGCCCTTCTCGACGAAAACATAGCCAATGCGCAAAGCGGTAACCAGGTAATAGCCATTGATGAATTTCTTCTTTCA

Coding sequence (CDS)

ATGGTTATGTTGGCGGCAGAACCATTAAAAACGAACGGTTGTCTTTTTACGTTTTGGACGGTTAAGATTTCCCGCCACAGGGAGCTTCATTCGCATACGGATAACGCTGGTGCAGAGTACTGCAGAGTACTACAGAGTGAGACGAGGACCCAAGAACCAGTGGCTGAGAATTGTAATCTTTTCATTTTCACTATTTCACAGAGACCATCAATGGCCGCTCTTAGGTTCGGCTTCACCGCCACCACCATCCACGTTTCATCAACGTCGATTCTCACCCGCACTCGCCCCAACCCAAAGACCATTACCTGCGTCGGATGGGACCCAGAAGGCATTTTTGGACCGCCTCAGACCGGCCATATCGCTCGAAGAGAGTTCACAAGGCGGCTGGAGAGGGATGCCGAAGCTCGCGAGGCTTTCGAACGCGAAGTCCGGGAAGAGAAAGAACGCCGCCAATTGCTTCGAGCGTCTCGTGTAGTTCCGAACAACGTGACTGGCCTTATTGAGTATTTTCTTGATACTGAAGCTCAGGATATTGAATTTGAAATCGCCAGGTTAAGGCCCAGGCTGACCGAGGAGTTTTTTTCGAGTATAAAACTTGAGTTGGGAGAGCTTAGATTTGCCGTTAACAAAACTGAGGCCATGGAAGACAGAGTGATTGAGTTAGAAGCATTACAGAAAGCGCTTGAAGAAGGAATAGAAGCGTATGATAAAATGCAAGGCGAACTGGTAAAAGCAAGGGAAGGCTTAACCAAAATTTTAACATCAAAGGATGTAAAAGCTACCTTGTTGGATATGGTGGAACGAAACGAGCTCAATCGATCGCTACTAGCCCTTCTCGACGAAAACATAGCCAATGCGCAAAGCGGTAACCAGGTAATAGCCATTGATGAATTTCTTCTTTCA

Protein sequence

MVMLAAEPLKTNGCLFTFWTVKISRHRELHSHTDNAGAEYCRVLQSETRTQEPVAENCNLFIFTISQRPSMAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFTRRLERDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQVIAIDEFLLS

Homology

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BLAST of Cp4.1LG05g02720 vs. TrEMBL
Match: A0A0A0KKI9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G160130 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 8.7e-97
Identity = 194/221 (87.78%), Postives = 203/221 (91.86%), Query Frame = 1


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFTRRLE 130
           MAAL FGFT TTIH+ STSI  R+R  P+TITCVGWDPEG+FG PQTGHIAR EF RRLE
Sbjct: 1   MAALSFGFTPTTIHLPSTSI--RSRRIPQTITCVGWDPEGLFGKPQTGHIARNEFKRRLE 60

Query: 131 RDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 190
           +DAEAREAFER VREEKERR+ LR SRV+P NVTGLIEYFLDTEAQDIEFEIARLRPRL 
Sbjct: 61  KDAEAREAFERHVREEKERRKTLRESRVIPGNVTGLIEYFLDTEAQDIEFEIARLRPRLN 120

Query: 191 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 250
           EEFFS +KLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQ ELVKAREGLT
Sbjct: 121 EEFFSRVKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQRELVKAREGLT 180

Query: 251 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 292
           KILTSKDVKATLLDM+ERNELNRSLLALLDENIANAQ GNQ
Sbjct: 181 KILTSKDVKATLLDMLERNELNRSLLALLDENIANAQMGNQ 219

[Close]

BLAST of Cp4.1LG05g02720 vs. TrEMBL
Match: A0A067K043_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20771 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 5.3e-78
Identity = 157/221 (71.04%), Postives = 185/221 (83.71%), Query Frame = 1


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFTRRLE 130
           MAAL  G   +T        LTRT   P+ I+C+GWDPEG+FGPPQTGH+ARREF RRLE
Sbjct: 1   MAALNLGIATSTTITFRARPLTRTARRPR-ISCIGWDPEGVFGPPQTGHLARREFQRRLE 60

Query: 131 RDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 190
           RDAEAREAFE++VREEKERR+ LR SR++P+    LIEYFLDTEAQDIEFEIAR+RPRL 
Sbjct: 61  RDAEAREAFEQQVREEKERRRALRESRIIPDTPAELIEYFLDTEAQDIEFEIARMRPRLN 120

Query: 191 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 250
           +EFFS I+ ELG+LRFAV++TE MEDR+IELEALQKAL+EG EAYDKMQ +LV AR+ LT
Sbjct: 121 KEFFSKIEFELGQLRFAVSRTEDMEDRLIELEALQKALQEGTEAYDKMQVDLVNARKSLT 180

Query: 251 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 292
           +ILTSKDVKATLL+MVE+N++NRSLL LLDENIA+A   NQ
Sbjct: 181 EILTSKDVKATLLEMVEQNKINRSLLTLLDENIASAHQSNQ 220

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BLAST of Cp4.1LG05g02720 vs. TrEMBL
Match: A0A151TJK2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_013522 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 2.0e-77
Identity = 161/226 (71.24%), Postives = 186/226 (82.30%), Query Frame = 1


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPN-----PKTITCVGWDPEGIFGPPQTGHIARREF 130
           MA L FG    TI VSS +    TR N     P  I C+GWDPEG+ GPP+TGH+AR E 
Sbjct: 1   MATLSFGIA--TISVSSAADCG-TRSNWKWRRPNRILCIGWDPEGVLGPPKTGHLARLEL 60

Query: 131 TRRLERDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARL 190
            RRLERD EAREAF+R+ REEKERRQ LR SRV+P+    LIEY LDTEAQ+IEFEIAR+
Sbjct: 61  KRRLERDTEAREAFQRQAREEKERRQSLRQSRVLPDTPQDLIEYLLDTEAQEIEFEIARM 120

Query: 191 RPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKA 250
           RPRL +EFFS +KLELG+LRFAVN+T+ MEDR+IELEAL+KA++EG+EAYDKMQ EL+KA
Sbjct: 121 RPRLNQEFFSQLKLELGQLRFAVNRTQLMEDRLIELEALEKAIQEGVEAYDKMQDELIKA 180

Query: 251 REGLTKILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 292
           RE LTKILTSKDVKATLL+MVERNE+NRSLLALLDENIA+AQ GNQ
Sbjct: 181 RENLTKILTSKDVKATLLEMVERNEINRSLLALLDENIASAQRGNQ 223

[Close]

BLAST of Cp4.1LG05g02720 vs. TrEMBL
Match: A0A0S3T5H8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G207400 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.6e-77
Identity = 161/226 (71.24%), Postives = 185/226 (81.86%), Query Frame = 1


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPK----TITCVGWDPEGIFGPPQTGHIARREFT 130
           MA L FGF  T++   S +   R R N +    TI  VGWDPEG+ GPPQTGH+AR EF 
Sbjct: 1   MATLSFGFATTSV---SAAAGYRRRSNCRWRRPTILSVGWDPEGVLGPPQTGHLARLEFR 60

Query: 131 RRLERDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLR 190
           RRLERD+EAREAF+R+V EEKERRQ LR SR++P+    LIEYFLDTEAQ+IEFEIAR+R
Sbjct: 61  RRLERDSEAREAFQRQVEEEKERRQTLRQSRILPDTPEELIEYFLDTEAQEIEFEIARMR 120

Query: 191 PRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAR 250
            RL E FF+ +K ELG+LRFAVNKTE ME+R IELEAL+KA++EGIEAYDKMQGEL+KAR
Sbjct: 121 TRLDEGFFAQLKFELGQLRFAVNKTEHMEERQIELEALEKAIQEGIEAYDKMQGELIKAR 180

Query: 251 EGLTKILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQV 293
             LTKILTSKDVKATLLDMVE+NE+NRSLLALLDENIANA  GNQV
Sbjct: 181 ASLTKILTSKDVKATLLDMVEKNEINRSLLALLDENIANAHKGNQV 223

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BLAST of Cp4.1LG05g02720 vs. TrEMBL
Match: B9RBQ2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1679860 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 4.5e-77
Identity = 156/221 (70.59%), Postives = 185/221 (83.71%), Query Frame = 1


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFTRRLE 130
           MAAL  G   +      T  +TR++P    I+C+GWDPEG+ GPPQTGHIARREF RRLE
Sbjct: 1   MAALALGIATSITFNIRTLPITRSKPR---ISCIGWDPEGLLGPPQTGHIARREFQRRLE 60

Query: 131 RDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 190
           RDAEAREAFE+ VREEKERRQ LR SR +P+    L+EYFLDTEAQ+IEFEIAR+RPRL 
Sbjct: 61  RDAEAREAFEQHVREEKERRQNLRLSRDIPDTPAELVEYFLDTEAQEIEFEIARMRPRLN 120

Query: 191 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 250
           +EFFS ++ ELG+LRFAV+KTE MEDR+IELEALQKAL+EG EAYD+MQ +L+KA+E LT
Sbjct: 121 QEFFSHLRFELGQLRFAVSKTEDMEDRLIELEALQKALQEGTEAYDEMQTDLIKAKESLT 180

Query: 251 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 292
           K+LTSKDVKATLL+MVE++ELNRSLLALLDENIA+AQ  NQ
Sbjct: 181 KVLTSKDVKATLLEMVEKSELNRSLLALLDENIASAQQSNQ 218

[Close]

BLAST of Cp4.1LG05g02720 vs. TAIR10
Match: AT1G62780.1 (AT1G62780.1 unknown protein)

HSP 1 Score: 272.3 bits (695), Expect = 3.5e-73
Identity = 151/228 (66.23%), Postives = 180/228 (78.95%), Query Frame = 1


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPKT--ITCVGWDPEGIFGPPQTGHIARREFTRR 130
           MA L FG  A     ++T++ T  R N +   ITC  WDP+G+ GP QTGHIAR EF RR
Sbjct: 1   MATLSFGIAA-----AATTVRTIPRFNSRRSKITCE-WDPKGVLGPAQTGHIARLEFKRR 60

Query: 131 LERDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPR 190
           LERD+EAREAF++++REEKERRQ LR SRVVP+    LIEYFLDTEAQ+IE+EIARLR R
Sbjct: 61  LERDSEAREAFQKQLREEKERRQALRQSRVVPDTAAELIEYFLDTEAQEIEYEIARLRGR 120

Query: 191 LTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREG 250
           L +EFF+ I+LE+G++RFAV KT  +EDR+IELE LQKALEEGIEAYDKMQ EL+ A   
Sbjct: 121 LNDEFFAQIRLEIGQIRFAVTKTADIEDRLIELETLQKALEEGIEAYDKMQNELMTATNS 180

Query: 251 LTKILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQVIAID 297
           LTK+LTS D+K TLLDMVE+N++NRSLLALLDENIANA  GNQ  A D
Sbjct: 181 LTKLLTSTDIKTTLLDMVEKNQINRSLLALLDENIANAYKGNQKEAGD 222

[Close]

BLAST of Cp4.1LG05g02720 vs. NCBI nr
Match: gi|659073574|ref|XP_008437135.1| (PREDICTED: uncharacterized protein LOC103482648 [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 1.3e-98
Identity = 196/221 (88.69%), Postives = 206/221 (93.21%), Query Frame = 1


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFTRRLE 130
           MAAL FGFTATTIH+ STSI  R+RP P+TITC+GWDPEG+FG PQTGHIAR EF RRLE
Sbjct: 1   MAALSFGFTATTIHLPSTSI--RSRPIPQTITCIGWDPEGLFGKPQTGHIARNEFKRRLE 60

Query: 131 RDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 190
           +DAEAREAFER VREEKERR+ LR SRV+P+NVTGLIEYFLDTEAQDIEFEIARLRPRL 
Sbjct: 61  KDAEAREAFERHVREEKERRKALRESRVIPDNVTGLIEYFLDTEAQDIEFEIARLRPRLN 120

Query: 191 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 250
           EEFFS +KLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQ ELVKAREGLT
Sbjct: 121 EEFFSHVKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQRELVKAREGLT 180

Query: 251 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 292
           KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQ GNQ
Sbjct: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQ 219

[Close]

BLAST of Cp4.1LG05g02720 vs. NCBI nr
Match: gi|778699933|ref|XP_004147583.2| (PREDICTED: uncharacterized protein LOC101214026 [Cucumis sativus])

HSP 1 Score: 361.7 bits (927), Expect = 1.3e-96
Identity = 194/221 (87.78%), Postives = 203/221 (91.86%), Query Frame = 1


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFTRRLE 130
           MAAL FGFT TTIH+ STSI  R+R  P+TITCVGWDPEG+FG PQTGHIAR EF RRLE
Sbjct: 1   MAALSFGFTPTTIHLPSTSI--RSRRIPQTITCVGWDPEGLFGKPQTGHIARNEFKRRLE 60

Query: 131 RDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 190
           +DAEAREAFER VREEKERR+ LR SRV+P NVTGLIEYFLDTEAQDIEFEIARLRPRL 
Sbjct: 61  KDAEAREAFERHVREEKERRKTLRESRVIPGNVTGLIEYFLDTEAQDIEFEIARLRPRLN 120

Query: 191 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 250
           EEFFS +KLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQ ELVKAREGLT
Sbjct: 121 EEFFSRVKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQRELVKAREGLT 180

Query: 251 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 292
           KILTSKDVKATLLDM+ERNELNRSLLALLDENIANAQ GNQ
Sbjct: 181 KILTSKDVKATLLDMLERNELNRSLLALLDENIANAQMGNQ 219

[Close]

BLAST of Cp4.1LG05g02720 vs. NCBI nr
Match: gi|1012128846|ref|XP_015964402.1| (PREDICTED: uncharacterized protein LOC107488207 [Arachis duranensis])

HSP 1 Score: 304.7 bits (779), Expect = 1.8e-79
Identity = 166/225 (73.78%), Postives = 186/225 (82.67%), Query Frame = 1


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPKT----ITCVGWDPEGIFGPPQTGHIARREFT 130
           MAAL FG  ATT     T+  T TRP   T    I C+GWDPEGI GPPQTGHIAR EF 
Sbjct: 1   MAALSFGM-ATTAWNHGTNTHTHTRPRTHTRTPTIRCIGWDPEGILGPPQTGHIARLEFK 60

Query: 131 RRLERDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLR 190
           RRLERDA+AREAF+R+VREEK+RRQ LR SR+ P+N   LIEY LDTEAQDIEFEIAR+R
Sbjct: 61  RRLERDADAREAFDRQVREEKQRRQELRQSRIPPDNPQELIEYLLDTEAQDIEFEIARMR 120

Query: 191 PRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAR 250
           PRL EEFFS +K ELG+LRFAVNKTEA EDR+IELEAL+KA++EGI+AYDKMQGEL+KAR
Sbjct: 121 PRLNEEFFSQLKSELGQLRFAVNKTEATEDRLIELEALEKAIQEGIDAYDKMQGELIKAR 180

Query: 251 EGLTKILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 292
           E LTKILTSKDVKATLL MVE +E+NRSLLALLDENIA+A   NQ
Sbjct: 181 ESLTKILTSKDVKATLLQMVESSEINRSLLALLDENIADAHRSNQ 224

[Close]

BLAST of Cp4.1LG05g02720 vs. NCBI nr
Match: gi|1021517082|ref|XP_016202044.1| (PREDICTED: uncharacterized protein LOC107643023 [Arachis ipaensis])

HSP 1 Score: 301.2 bits (770), Expect = 2.0e-78
Identity = 164/226 (72.57%), Postives = 185/226 (81.86%), Query Frame = 1


Query: 71  MAALRFGFTATTI-HVSSTSILTRTRPNPKT----ITCVGWDPEGIFGPPQTGHIARREF 130
           MAAL FG   T   H ++T   T TRP   T    I C+GWDPEGI G PQTGHIAR EF
Sbjct: 1   MAALSFGMATTAWNHGTNTHTHTHTRPRTHTRTPTIRCIGWDPEGILGAPQTGHIARLEF 60

Query: 131 TRRLERDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARL 190
            RRLERDA+AREAF+R+VREEK+RRQ LR SR+ P+N   LIEY LDTEAQDIEFEIAR+
Sbjct: 61  KRRLERDADAREAFDRQVREEKQRRQELRQSRIPPDNPQELIEYLLDTEAQDIEFEIARM 120

Query: 191 RPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKA 250
           RPRL EEFFS +K ELG+LRFAVNKTEA EDR+IELEAL+KA++EGI+AYDKMQGEL+KA
Sbjct: 121 RPRLNEEFFSQLKSELGQLRFAVNKTEATEDRLIELEALEKAIQEGIDAYDKMQGELIKA 180

Query: 251 REGLTKILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 292
           RE LTKILTSKDVKATLL MVE +E+NRSLLALLDENIA+A   NQ
Sbjct: 181 RESLTKILTSKDVKATLLQMVESSEINRSLLALLDENIADAHRSNQ 226

[Close]

BLAST of Cp4.1LG05g02720 vs. NCBI nr
Match: gi|951076138|ref|XP_014493181.1| (PREDICTED: uncharacterized protein LOC106755525 [Vigna radiata var. radiata])

HSP 1 Score: 299.7 bits (766), Expect = 5.8e-78
Identity = 161/225 (71.56%), Postives = 184/225 (81.78%), Query Frame = 1


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPK----TITCVGWDPEGIFGPPQTGHIARREFT 130
           MA L FGF  T++  ++     R R N +    TI CVGWDPEG+ GPPQTGH+AR EF 
Sbjct: 1   MATLSFGFATTSVTAAAGY---RRRSNCRWRTPTILCVGWDPEGVLGPPQTGHLARLEFR 60

Query: 131 RRLERDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLR 190
           RRLERD+EAREAF+R+V EEKERRQ LR SR +P+    LIEYFLDTEAQ+IEFEIAR+R
Sbjct: 61  RRLERDSEAREAFQRQVEEEKERRQTLRQSRTLPDTPEELIEYFLDTEAQEIEFEIARMR 120

Query: 191 PRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAR 250
           PRL E FF+ +K ELG+LRFAVNKTE ME+R IELEAL+KA++EGIEAYDKMQGEL+KAR
Sbjct: 121 PRLDEGFFAQLKFELGQLRFAVNKTEHMEERQIELEALEKAIQEGIEAYDKMQGELIKAR 180

Query: 251 EGLTKILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 292
             LTKILTSKDVKATLLDMVE NE+NRSLLALLDENIANA  GNQ
Sbjct: 181 ASLTKILTSKDVKATLLDMVENNEINRSLLALLDENIANAHKGNQ 222

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g02720 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG05g02720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKI9_CUCSA	8.7e-97	87.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G160130 PE=4 SV=1	[more]
A0A067K043_JATCU	5.3e-78	71.04	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20771 PE=4 SV=1	[more]
A0A151TJK2_CAJCA	2.0e-77	71.24	Uncharacterized protein OS=Cajanus cajan GN=KK1_013522 PE=4 SV=1	[more]
A0A0S3T5H8_PHAAN	2.6e-77	71.24	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G207400 PE=...	[more]
B9RBQ2_RICCO	4.5e-77	70.59	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1679860 PE=4 SV=1	[more]

BLAST of Cp4.1LG05g02720 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G62780.1	3.5e-73	66.23	unknown protein	[more]

BLAST of Cp4.1LG05g02720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659073574\|ref\|XP_008437135.1\|	1.3e-98	88.69	PREDICTED: uncharacterized protein LOC103482648 [Cucumis melo]	[more]
gi\|778699933\|ref\|XP_004147583.2\|	1.3e-96	87.78	PREDICTED: uncharacterized protein LOC101214026 [Cucumis sativus]	[more]
gi\|1012128846\|ref\|XP_015964402.1\|	1.8e-79	73.78	PREDICTED: uncharacterized protein LOC107488207 [Arachis duranensis]	[more]
gi\|1021517082\|ref\|XP_016202044.1\|	2.0e-78	72.57	PREDICTED: uncharacterized protein LOC107643023 [Arachis ipaensis]	[more]
gi\|951076138\|ref\|XP_014493181.1\|	5.8e-78	71.56	PREDICTED: uncharacterized protein LOC106755525 [Vigna radiata var. radiata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0044710	single-organism metabolic process
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0034660	ncRNA metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0008150	biological_process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0044763	single-organism cellular process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g02720.1	Cp4.1LG05g02720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 221..241 score: -coord: 122..156 scor
None	No IPR available	PANTHER	PTHR36333	FAMILY NOT NAMED	coord: 68..296 score: 5.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG05g02720	Cucsa.302170	Cucumber (Gy14) v1	cgycpeB0792
Cp4.1LG05g02720	CmaCh02G015230	Cucurbita maxima (Rimu)	cmacpeB647
Cp4.1LG05g02720	CmoCh02G015670	Cucurbita moschata (Rifu)	cmocpeB596
Cp4.1LG05g02720	Cla011549	Watermelon (97103) v1	cpewmB719
Cp4.1LG05g02720	Csa5G160130	Cucumber (Chinese Long) v2	cpecuB739
Cp4.1LG05g02720	MELO3C005568	Melon (DHL92) v3.5.1	cpemeB647
Cp4.1LG05g02720	ClCG01G003730	Watermelon (Charleston Gray)	cpewcgB639
Cp4.1LG05g02720	CSPI05G06460	Wild cucumber (PI 183967)	cpecpiB742
Cp4.1LG05g02720	Lsi09G003870	Bottle gourd (USVL1VR-Ls)	cpelsiB586
Cp4.1LG05g02720	MELO3C005568.2	Melon (DHL92) v3.6.1	cpemedB774
Cp4.1LG05g02720	CsaV3_5G003870	Cucumber (Chinese Long) v3	cpecucB0918
Cp4.1LG05g02720	CsGy5G003760	Cucumber (Gy14) v2	cgybcpeB694
Cp4.1LG05g02720	Carg02464	Silver-seed gourd	carcpeB1282

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG05g02720	Cucurbita pepo (Zucchini)	cpecpeB226
Cp4.1LG05g02720	Cucurbita pepo (Zucchini)	cpecpeB508
Cp4.1LG05g02720	Cucumber (Gy14) v1	cgycpeB0686
Cp4.1LG05g02720	Cucurbita maxima (Rimu)	cmacpeB329
Cp4.1LG05g02720	Cucurbita moschata (Rifu)	cmocpeB292
Cp4.1LG05g02720	Cucurbita moschata (Rifu)	cmocpeB792
Cp4.1LG05g02720	Wild cucumber (PI 183967)	cpecpiB721
Cp4.1LG05g02720	Cucumber (Chinese Long) v2	cpecuB719
Cp4.1LG05g02720	Bottle gourd (USVL1VR-Ls)	cpelsiB624
Cp4.1LG05g02720	Watermelon (Charleston Gray)	cpewcgB676
Cp4.1LG05g02720	Watermelon (97103) v1	cpewmB703
Cp4.1LG05g02720	Melon (DHL92) v3.5.1	cpemeB697
Cp4.1LG05g02720	Cucumber (Gy14) v2	cgybcpeB427
Cp4.1LG05g02720	Melon (DHL92) v3.6.1	cpemedB831
Cp4.1LG05g02720	Cucumber (Chinese Long) v3	cpecucB0896