Cp4.1LG05g02310 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG05g02310
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ethylene-responsive transcription factor, putative
Location	Cp4.1LG05 : 1291073 .. 1291795 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACCACACCACAAAAACAGAGCCGGATTTTGCTTATCTTGGCCCAATTCGCCGCCATTTGTTAGGCGAATCGGAGGCCGCCGGTCCCGTTTTCAACCAGACTGGTAGTTTCAGTAGCTTAATTCCATGTCTTCACGACAACTGGGGCGATTTGCCACTCAAAGTGGATGACTCTGAAGATATGCTTCTCGCTGCTGTTCTCGGGGATGCCGTCGGTGCTGGATGGGTGCCGTCACTTGGAAGTTGCGATTTTGGGTTCTCAGCAGTGAAATCGGAGCCGGAGATGATTCCCGTGAGTTTTCCACCGGTGCAACCCAATGTGGCGATGAGGCCGGCGGTGGTACCGCAAAAGGGTAAGCATTACAGAGGAGTGCGGCAACGGCCGTGGGGGAAGTTTGCAGCGGAGATTCGGGACCCGGCGAAAAATGGCGCTAGAGTTTGGCTTGGAACCTATGAGACGGCGGAGGATGCAGCTCTAGCTTATGATCGAGCAGCCTACCGAATGAGAGGCTCGAGAGCTCTACTCAATTTCCCCCTCCGTGTCAACTCCGGCGAGCCCGAACCGGTTCGAATCACGTCGAAGCGATCCTCGCCGGATCTTTCGTCTTCGCCAAAGCGGCGGAAGAAGGCCACCTCCGCCGTCGAAGGTGGAGGTGTACAAGTGGAGCAACAAGTGGCAAGCTTTACACGTGGAGGGCAGATGTTTGTCAGCCAATGCTAA

mRNA sequence

ATGTACCACACCACAAAAACAGAGCCGGATTTTGCTTATCTTGGCCCAATTCGCCGCCATTTGTTAGGCGAATCGGAGGCCGCCGGTCCCGTTTTCAACCAGACTGGTAGTTTCAGTAGCTTAATTCCATGTCTTCACGACAACTGGGGCGATTTGCCACTCAAAGTGGATGACTCTGAAGATATGCTTCTCGCTGCTGTTCTCGGGGATGCCGTCGGTGCTGGATGGGTGCCGTCACTTGGAAGTTGCGATTTTGGGTTCTCAGCAGTGAAATCGGAGCCGGAGATGATTCCCCGGCGGAAGAAGGCCACCTCCGCCGTCGAAGGTGGAGGTGTACAAGTGGAGCAACAAGTGGCAAGCTTTACACGTGGAGGGCAGATGTTTGTCAGCCAATGCTAA

Coding sequence (CDS)

ATGTACCACACCACAAAAACAGAGCCGGATTTTGCTTATCTTGGCCCAATTCGCCGCCATTTGTTAGGCGAATCGGAGGCCGCCGGTCCCGTTTTCAACCAGACTGGTAGTTTCAGTAGCTTAATTCCATGTCTTCACGACAACTGGGGCGATTTGCCACTCAAAGTGGATGACTCTGAAGATATGCTTCTCGCTGCTGTTCTCGGGGATGCCGTCGGTGCTGGATGGGTGCCGTCACTTGGAAGTTGCGATTTTGGGTTCTCAGCAGTGAAATCGGAGCCGGAGATGATTCCCCGGCGGAAGAAGGCCACCTCCGCCGTCGAAGGTGGAGGTGTACAAGTGGAGCAACAAGTGGCAAGCTTTACACGTGGAGGGCAGATGTTTGTCAGCCAATGCTAA

Protein sequence

MYHTTKTEPDFAYLGPIRRHLLGESEAAGPVFNQTGSFSSLIPCLHDNWGDLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGSCDFGFSAVKSEPEMIPRRKKATSAVEGGGVQVEQQVASFTRGGQMFVSQC

Homology

[Close]

BLAST of Cp4.1LG05g02310 vs. Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 5.1e-18
Identity = 54/136 (39.71%), Postives = 71/136 (52.21%), Query Frame = 1


Query: 1   MYHTTKTEPDFAYLGPIRRHLLGESE-------------------AAGPVFNQTGSFSSL 60
           M  T  ++ D+A+L  IRRHLLGESE                   +  PV+ +  SFS L
Sbjct: 1   MSMTADSQSDYAFLESIRRHLLGESEPILSESTASSVTQSCVTGQSIKPVYGRNPSFSKL 60

Query: 61  IPCLHDNWGDLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGSCD---FGFSAVKSEP---- 108
            PC  ++WGDLPLK +DSEDML+  +L DA   GW PS  S D     F +VK E     
Sbjct: 61  YPCFTESWGDLPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPESF 120

[Close]

BLAST of Cp4.1LG05g02310 vs. Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.4e-14
Identity = 38/78 (48.72%), Postives = 51/78 (65.38%), Query Frame = 1


Query: 30  PVFNQTGSFSSLIPCLHDNWGDLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGSCDFGFSA 89
           PV+++T SFSSL+PCL D WGDLPLKVDDSEDM++  +L DA+  GW P      F  ++
Sbjct: 10  PVYHRTSSFSSLMPCLTDTWGDLPLKVDDSEDMVIYGLLSDALTTGWTP------FNLTS 69

Query: 90  VKSEPEMIPRRKKATSAV 108
            + + E     + ATS V
Sbjct: 70  TEIKAEPREEIEPATSPV 81

[Close]

BLAST of Cp4.1LG05g02310 vs. Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.9e-13
Identity = 38/66 (57.58%), Postives = 45/66 (68.18%), Query Frame = 1


Query: 30 PVFNQTGSFSSLIPCLHDNWGDLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGSCDFGFSA 89
          PV+ +  SFS LIPCL + WGDLPLKVDDSEDM++  +L DA+  GW P      F FSA
Sbjct: 19 PVYRRNSSFSRLIPCLTETWGDLPLKVDDSEDMVIYTLLKDALNVGWSP------FNFSA 78

Query: 90 --VKSE 94
            VKSE
Sbjct: 79 GEVKSE 78

[Close]

BLAST of Cp4.1LG05g02310 vs. Swiss-Prot
Match: ERF1_SOLLC (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.1e-12
Identity = 30/50 (60.00%), Postives = 39/50 (78.00%), Query Frame = 1


Query: 30 PVFNQTGSFSSLIPCLHDNWGDLPLKVDDSEDMLLAAVLGDAVGAGWVPS 80
          PV+ ++ SFSSL+PCL ++WGDLPLKV+DSEDM++   L DA   GW PS
Sbjct: 18 PVYCRSSSFSSLMPCLTESWGDLPLKVNDSEDMVIYGFLQDAFSIGWTPS 67

[Close]

BLAST of Cp4.1LG05g02310 vs. Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.1e-12
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 1


Query: 37 SFSSLIPCLHDNWGDLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGSCDFGFSAVKSEP 95
          SFSSL+PCL D WGDLPLKVDDSEDM++  +L DA+ AGW P     +   + +K+EP
Sbjct: 13 SFSSLMPCLTDTWGDLPLKVDDSEDMVIYGLLSDALTAGWTP----FNLTSTEIKAEP 66

[Close]

BLAST of Cp4.1LG05g02310 vs. TrEMBL
Match: A0A0A0KKS0_CUCSA (AP2/ERF domain-containing transcription factor OS=Cucumis sativus GN=Csa_5G165850 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 2.8e-39
Identity = 80/108 (74.07%), Postives = 88/108 (81.48%), Query Frame = 1


Query: 1   MYHTTKTEPDFAYLGPIRRHLLGESEAAG----------PVFNQTGSFSSLIPCLHDNWG 60
           MYHTTK+E DF +L PIRRHLLGES+ +           PVF ++GSFSSLIPCL DNWG
Sbjct: 1   MYHTTKSESDFCFLDPIRRHLLGESDISAAAAAPLGRPTPVFTRSGSFSSLIPCLEDNWG 60

Query: 61  DLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGSCDFGFSAVKSEPEMIP 99
           DLPLKVDDSEDM+LAAVL DAVG GWVPSLGSCDFGFS VKSEPE+IP
Sbjct: 61  DLPLKVDDSEDMMLAAVLRDAVGVGWVPSLGSCDFGFSEVKSEPEVIP 108

[Close]

BLAST of Cp4.1LG05g02310 vs. TrEMBL
Match: A0A0A0L250_CUCSA (Ethylene responsive transcription factor 1a OS=Cucumis sativus GN=Csa_3G017320 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.5e-24
Identity = 60/101 (59.41%), Postives = 70/101 (69.31%), Query Frame = 1


Query: 8   EPDFAYLGPIRRHLLGESEA-----------AGPVFNQTGSFSSLIPCLHDNWGDLPLKV 67
           E DF +L  IRRHLLG+SEA             PVF ++ SF SL PCL +NWGDLPLK 
Sbjct: 10  ESDFVHLETIRRHLLGDSEAFRCGNFSLAGTTSPVFCRSSSFGSLYPCLTENWGDLPLKE 69

Query: 68  DDSEDMLLAAVLGDAVGAGWVPSLGSCDFGFSAVKSEPEMI 98
           DDSEDM+LA VL DAV  GWVPSL + +FGFS VK EPE++
Sbjct: 70  DDSEDMVLAGVLRDAVNVGWVPSLETFNFGFSDVKPEPEIL 110

[Close]

BLAST of Cp4.1LG05g02310 vs. TrEMBL
Match: D1MWZ3_CITLA (Ethylene responsive transcription factor 1a OS=Citrullus lanatus subsp. vulgaris GN=CitERF1a PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.5e-24
Identity = 62/107 (57.94%), Postives = 72/107 (67.29%), Query Frame = 1


Query: 8   EPDFAYLGPIRRHLLGESEA-----------AGPVFNQTGSFSSLIPCLHDNWGDLPLKV 67
           E DF  L  IRRHLLGES+A           A PVF ++ SF SL PCL +NWGDLPLK 
Sbjct: 10  ESDFVLLETIRRHLLGESDAYRCGNFALAGTASPVFCRSSSFGSLYPCLTENWGDLPLKE 69

Query: 68  DDSEDMLLAAVLGDAVGAGWVPSLG-----SCDFGFSAVKSEPEMIP 99
           DDSEDM++A VL DAV  GWVPSLG     + +FGFS VK EPE++P
Sbjct: 70  DDSEDMVIAGVLRDAVSVGWVPSLGGSPSDAFNFGFSDVKPEPEILP 116

[Close]

BLAST of Cp4.1LG05g02310 vs. TrEMBL
Match: A0A0M4LB64_9ROSA (AP2/EREBP family transcription factor-like protein 13 OS=Prunus pseudocerasus PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 9.6e-24
Identity = 64/124 (51.61%), Postives = 78/124 (62.90%), Query Frame = 1


Query: 1   MYHTTKTEPDFAYLGPIRRHLLGESE----------AAGPVFNQTGSFSSLIPCLHDNWG 60
           MY  + T+ D   L  IRRHLLGE++           +GP+F+++ SFSSL PCL +NWG
Sbjct: 1   MYGQSGTDGDITLLDSIRRHLLGETDLRIGNSMANSVSGPIFSRSSSFSSLYPCLTENWG 60

Query: 61  DLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGS-----CDFGFSAVKSEPEM------IPR 104
           DLPLK DDSEDM+L  VL DAV  GWVPSLGS     C   FS VKSEPE+      +P 
Sbjct: 61  DLPLKEDDSEDMVLYGVLRDAVNVGWVPSLGSGSADTCSLNFS-VKSEPEVLTPVSTVPE 120

[Close]

BLAST of Cp4.1LG05g02310 vs. TrEMBL
Match: D5L125_MALDO (AP2 domain class transcription factor OS=Malus domestica GN=AP2D41 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.1e-23
Identity = 59/110 (53.64%), Postives = 74/110 (67.27%), Query Frame = 1


Query: 1   MYHTTKTEPDFAYLGPIRRHLLGESE----------AAGPVFNQTGSFSSLIPCLHDNWG 60
           MY  +  + D+  L  IRRH LGE++           +GP+F+++ SFSSL PCL +NWG
Sbjct: 1   MYGQSGADSDYILLESIRRHFLGETDLLIGNPMSNSGSGPIFSRSSSFSSLYPCLTENWG 60

Query: 61  DLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGS--CDFGFSAVKSEPEMIP 99
           DLPLK DDSEDM+L  VL DAV  GWVPS  S  C +GFS VKSEPE++P
Sbjct: 61  DLPLKEDDSEDMVLYGVLRDAVSVGWVPSGSSDTCSYGFS-VKSEPEVLP 109

[Close]

BLAST of Cp4.1LG05g02310 vs. TAIR10
Match: AT4G17500.1 (AT4G17500.1 ethylene responsive element binding factor 1)

HSP 1 Score: 92.0 bits (227), Expect = 2.9e-19
Identity = 54/136 (39.71%), Postives = 71/136 (52.21%), Query Frame = 1


Query: 1   MYHTTKTEPDFAYLGPIRRHLLGESE-------------------AAGPVFNQTGSFSSL 60
           M  T  ++ D+A+L  IRRHLLGESE                   +  PV+ +  SFS L
Sbjct: 1   MSMTADSQSDYAFLESIRRHLLGESEPILSESTASSVTQSCVTGQSIKPVYGRNPSFSKL 60

Query: 61  IPCLHDNWGDLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGSCD---FGFSAVKSEP---- 108
            PC  ++WGDLPLK +DSEDML+  +L DA   GW PS  S D     F +VK E     
Sbjct: 61  YPCFTESWGDLPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPESF 120

[Close]

BLAST of Cp4.1LG05g02310 vs. TAIR10
Match: AT5G47220.1 (AT5G47220.1 ethylene responsive element binding factor 2)

HSP 1 Score: 64.7 bits (156), Expect = 4.9e-11
Identity = 45/113 (39.82%), Postives = 54/113 (47.79%), Query Frame = 1


Query: 1   MYHTTKTEPDFAYLGPIRRHLLGESEAAGPVFNQTGSFSSLIPCLHDNWGDLPLKVDDSE 60
           MY     E D+A L  I RHLLG         N++   S    C  ++WG LPLK +DSE
Sbjct: 1   MYGQCNIESDYALLESITRHLLGGGGENELRLNESTPSS----CFTESWGGLPLKENDSE 60

Query: 61  DMLLAAVLGDAVGAGWVPSLGSCDFGFSAVKSEP-----EMIPRRKKATSAVE 109
           DML+  +L DA       S  SC F F AVK EP      M  + KKA    E
Sbjct: 61  DMLVYGLLKDAFHFDTSSSDLSCLFDFPAVKVEPTENFTAMEEKPKKAIPVTE 109

[Close]

BLAST of Cp4.1LG05g02310 vs. TAIR10
Match: AT2G44840.1 (AT2G44840.1 ethylene-responsive element binding factor 13)

HSP 1 Score: 56.6 bits (135), Expect = 1.3e-08
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 1


Query: 37 SFSSLIPCLHDNWGDLPLKVDDSEDMLLAAVLGDAVGAGWVPSL 81
          SFS++I  L+DNW DLPL VDDS+DM +   L DAV +GW PS+
Sbjct: 21 SFSNVI--LNDNWSDLPLSVDDSQDMAIYNTLRDAVSSGWTPSV 62

[Close]

BLAST of Cp4.1LG05g02310 vs. NCBI nr
Match: gi|449469359|ref|XP_004152388.1| (PREDICTED: ethylene-responsive transcription factor 1A-like [Cucumis sativus])

HSP 1 Score: 169.5 bits (428), Expect = 4.0e-39
Identity = 80/108 (74.07%), Postives = 88/108 (81.48%), Query Frame = 1


Query: 1   MYHTTKTEPDFAYLGPIRRHLLGESEAAG----------PVFNQTGSFSSLIPCLHDNWG 60
           MYHTTK+E DF +L PIRRHLLGES+ +           PVF ++GSFSSLIPCL DNWG
Sbjct: 1   MYHTTKSESDFCFLDPIRRHLLGESDISAAAAAPLGRPTPVFTRSGSFSSLIPCLEDNWG 60

Query: 61  DLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGSCDFGFSAVKSEPEMIP 99
           DLPLKVDDSEDM+LAAVL DAVG GWVPSLGSCDFGFS VKSEPE+IP
Sbjct: 61  DLPLKVDDSEDMMLAAVLRDAVGVGWVPSLGSCDFGFSEVKSEPEVIP 108

[Close]

BLAST of Cp4.1LG05g02310 vs. NCBI nr
Match: gi|659073375|ref|XP_008437026.1| (PREDICTED: ethylene-responsive transcription factor 2-like [Cucumis melo])

HSP 1 Score: 167.2 bits (422), Expect = 2.0e-38
Identity = 80/110 (72.73%), Postives = 88/110 (80.00%), Query Frame = 1


Query: 1   MYHTTKTEPDFAYLGPIRRHLLGESEAAG------------PVFNQTGSFSSLIPCLHDN 60
           MY TTKTE DF +L PIRRHLLGESE +             PVF+++GSFSSLIPCL DN
Sbjct: 49  MYQTTKTESDFGFLDPIRRHLLGESEISAATAAVAPLGRPTPVFSRSGSFSSLIPCLEDN 108

Query: 61  WGDLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGSCDFGFSAVKSEPEMIP 99
           WGDLPLKVDDSEDM+LAAVL DAVGAGWVPSLGSCDFGF  VK+EPE+IP
Sbjct: 109 WGDLPLKVDDSEDMMLAAVLRDAVGAGWVPSLGSCDFGFPEVKTEPEVIP 158

[Close]

BLAST of Cp4.1LG05g02310 vs. NCBI nr
Match: gi|449458984|ref|XP_004147226.1| (PREDICTED: ethylene-responsive transcription factor 2 [Cucumis sativus])

HSP 1 Score: 120.6 bits (301), Expect = 2.1e-24
Identity = 60/101 (59.41%), Postives = 70/101 (69.31%), Query Frame = 1


Query: 8   EPDFAYLGPIRRHLLGESEA-----------AGPVFNQTGSFSSLIPCLHDNWGDLPLKV 67
           E DF +L  IRRHLLG+SEA             PVF ++ SF SL PCL +NWGDLPLK 
Sbjct: 10  ESDFVHLETIRRHLLGDSEAFRCGNFSLAGTTSPVFCRSSSFGSLYPCLTENWGDLPLKE 69

Query: 68  DDSEDMLLAAVLGDAVGAGWVPSLGSCDFGFSAVKSEPEMI 98
           DDSEDM+LA VL DAV  GWVPSL + +FGFS VK EPE++
Sbjct: 70  DDSEDMVLAGVLRDAVNVGWVPSLETFNFGFSDVKPEPEIL 110

[Close]

BLAST of Cp4.1LG05g02310 vs. NCBI nr
Match: gi|659095864|ref|XP_008448804.1| (PREDICTED: ethylene-responsive transcription factor 2 [Cucumis melo])

HSP 1 Score: 120.6 bits (301), Expect = 2.1e-24
Identity = 61/101 (60.40%), Postives = 69/101 (68.32%), Query Frame = 1


Query: 8   EPDFAYLGPIRRHLLGESEA-----------AGPVFNQTGSFSSLIPCLHDNWGDLPLKV 67
           E DF  L  IRRHLLG+SEA             PVF ++ SF SL PCL +NWGDLPLK 
Sbjct: 10  ESDFVLLETIRRHLLGDSEAFRCGNFSLAGTTSPVFCRSSSFGSLYPCLTENWGDLPLKE 69

Query: 68  DDSEDMLLAAVLGDAVGAGWVPSLGSCDFGFSAVKSEPEMI 98
           DDSEDMLLA VL DAV  GWVPSL + +FGFS VK EPE++
Sbjct: 70  DDSEDMLLAGVLRDAVNVGWVPSLETFNFGFSDVKPEPEIL 110

[Close]

BLAST of Cp4.1LG05g02310 vs. NCBI nr
Match: gi|270309000|dbj|BAI52953.1| (ethylene responsive transcription factor 1a [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 119.8 bits (299), Expect = 3.6e-24
Identity = 62/107 (57.94%), Postives = 72/107 (67.29%), Query Frame = 1


Query: 8   EPDFAYLGPIRRHLLGESEA-----------AGPVFNQTGSFSSLIPCLHDNWGDLPLKV 67
           E DF  L  IRRHLLGES+A           A PVF ++ SF SL PCL +NWGDLPLK 
Sbjct: 10  ESDFVLLETIRRHLLGESDAYRCGNFALAGTASPVFCRSSSFGSLYPCLTENWGDLPLKE 69

Query: 68  DDSEDMLLAAVLGDAVGAGWVPSLG-----SCDFGFSAVKSEPEMIP 99
           DDSEDM++A VL DAV  GWVPSLG     + +FGFS VK EPE++P
Sbjct: 70  DDSEDMVIAGVLRDAVSVGWVPSLGGSPSDAFNFGFSDVKPEPEILP 116

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g02310 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EF100_ARATH	5.1e-18	39.71	Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=...	[more]
ERF2_NICSY	3.4e-14	48.72	Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 ...	[more]
ERF1_TOBAC	2.9e-13	57.58	Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=...	[more]
ERF1_SOLLC	7.1e-12	60.00	Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 ...	[more]
ERF2_TOBAC	7.1e-12	56.90	Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=...	[more]

BLAST of Cp4.1LG05g02310 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKS0_CUCSA	2.8e-39	74.07	AP2/ERF domain-containing transcription factor OS=Cucumis sativus GN=Csa_5G16585...	[more]
A0A0A0L250_CUCSA	1.5e-24	59.41	Ethylene responsive transcription factor 1a OS=Cucumis sativus GN=Csa_3G017320 P...	[more]
D1MWZ3_CITLA	2.5e-24	57.94	Ethylene responsive transcription factor 1a OS=Citrullus lanatus subsp. vulgaris...	[more]
A0A0M4LB64_9ROSA	9.6e-24	51.61	AP2/EREBP family transcription factor-like protein 13 OS=Prunus pseudocerasus PE...	[more]
D5L125_MALDO	2.1e-23	53.64	AP2 domain class transcription factor OS=Malus domestica GN=AP2D41 PE=2 SV=1	[more]

BLAST of Cp4.1LG05g02310 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17500.1	2.9e-19	39.71	ethylene responsive element binding factor 1	[more]
AT5G47220.1	4.9e-11	39.82	ethylene responsive element binding factor 2	[more]
AT2G44840.1	1.3e-08	59.09	ethylene-responsive element binding factor 13	[more]

BLAST of Cp4.1LG05g02310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449469359\|ref\|XP_004152388.1\|	4.0e-39	74.07	PREDICTED: ethylene-responsive transcription factor 1A-like [Cucumis sativus]	[more]
gi\|659073375\|ref\|XP_008437026.1\|	2.0e-38	72.73	PREDICTED: ethylene-responsive transcription factor 2-like [Cucumis melo]	[more]
gi\|449458984\|ref\|XP_004147226.1\|	2.1e-24	59.41	PREDICTED: ethylene-responsive transcription factor 2 [Cucumis sativus]	[more]
gi\|659095864\|ref\|XP_008448804.1\|	2.1e-24	60.40	PREDICTED: ethylene-responsive transcription factor 2 [Cucumis melo]	[more]
gi\|270309000\|dbj\|BAI52953.1\|	3.6e-24	57.94	ethylene responsive transcription factor 1a [Citrullus lanatus subsp. vulgaris]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g02310.1	Cp4.1LG05g02310.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG05g02310	Cucsa.129630	Cucumber (Gy14) v1	cgycpeB0341
Cp4.1LG05g02310	Cucsa.321160	Cucumber (Gy14) v1	cgycpeB0853
Cp4.1LG05g02310	CmaCh02G015650	Cucurbita maxima (Rimu)	cmacpeB647
Cp4.1LG05g02310	CmaCh06G008030	Cucurbita maxima (Rimu)	cmacpeB844
Cp4.1LG05g02310	CmaCh15G010990	Cucurbita maxima (Rimu)	cmacpeB329
Cp4.1LG05g02310	CmaCh16G011160	Cucurbita maxima (Rimu)	cmacpeB359
Cp4.1LG05g02310	CmoCh16G011670	Cucurbita moschata (Rifu)	cmocpeB323
Cp4.1LG05g02310	CmoCh06G008260	Cucurbita moschata (Rifu)	cmocpeB792
Cp4.1LG05g02310	CmoCh15G011570	Cucurbita moschata (Rifu)	cmocpeB294
Cp4.1LG05g02310	CmoCh02G016080	Cucurbita moschata (Rifu)	cmocpeB596
Cp4.1LG05g02310	Cla003647	Watermelon (97103) v1	cpewmB713
Cp4.1LG05g02310	Csa3G017320	Cucumber (Chinese Long) v2	cpecuB718
Cp4.1LG05g02310	Csa5G165850	Cucumber (Chinese Long) v2	cpecuB738
Cp4.1LG05g02310	MELO3C013916	Melon (DHL92) v3.5.1	cpemeB700
Cp4.1LG05g02310	MELO3C005502	Melon (DHL92) v3.5.1	cpemeB647
Cp4.1LG05g02310	ClCG10G002440	Watermelon (Charleston Gray)	cpewcgB631
Cp4.1LG05g02310	ClCG01G004400	Watermelon (Charleston Gray)	cpewcgB641
Cp4.1LG05g02310	CSPI03G02430	Wild cucumber (PI 183967)	cpecpiB720
Cp4.1LG05g02310	CSPI05G07160	Wild cucumber (PI 183967)	cpecpiB740
Cp4.1LG05g02310	Lsi09G004580	Bottle gourd (USVL1VR-Ls)	cpelsiB585
Cp4.1LG05g02310	Lsi07G012730	Bottle gourd (USVL1VR-Ls)	cpelsiB630
Cp4.1LG05g02310	MELO3C013916.2	Melon (DHL92) v3.6.1	cpemedB830
Cp4.1LG05g02310	MELO3C005502.2	Melon (DHL92) v3.6.1	cpemedB776
Cp4.1LG05g02310	CsaV3_3G002460	Cucumber (Chinese Long) v3	cpecucB0895
Cp4.1LG05g02310	CsaV3_5G004600	Cucumber (Chinese Long) v3	cpecucB0917
Cp4.1LG05g02310	Bhi11G000042	Wax gourd	cpewgoB0908
Cp4.1LG05g02310	CsGy5G004570	Cucumber (Gy14) v2	cgybcpeB693
Cp4.1LG05g02310	CsGy3G002340	Cucumber (Gy14) v2	cgybcpeB426
Cp4.1LG05g02310	Carg12034	Silver-seed gourd	carcpeB0804
Cp4.1LG05g02310	Carg08794	Silver-seed gourd	carcpeB1099
Cp4.1LG05g02310	Carg23186	Silver-seed gourd	carcpeB0768

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG05g02310	Cp4.1LG00g05860	Cucurbita pepo (Zucchini)	cpecpeB014
Cp4.1LG05g02310	Cp4.1LG13g02430	Cucurbita pepo (Zucchini)	cpecpeB226
Cp4.1LG05g02310	Cp4.1LG14g09320	Cucurbita pepo (Zucchini)	cpecpeB246
Cp4.1LG05g02310	Cp4.1LG08g07220	Cucurbita pepo (Zucchini)	cpecpeB508

The following block(s) are covering this gene:

None