Cp4.1LG05g01680 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g01680
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRibosomal N-lysine methyltransferase 5
LocationCp4.1LG05 : 94320 .. 96837 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAGAGCACGCCAGCGTGATGCTTGGGTAGGATATTTAAATGCAGCTCAGATACCGTTTCACATCCGTGGATTCTGGTTCAAACCCTCCTGACTGCTCCATCGCCGTGGCACCACTCTAATCCGATCGTTACTGGTAGAGCTTGTTGACAAAGAATTCCAGTCTAAATCTTCTTTACTGTTCATCTTTATCTTCTATAGATCTTAATCCTACGGAAGAACTTCCTCGATATTTCGGGTGCGTTAATCTCTCACTCTCTTCTTGAAATGGTTGAACAAAGTGACGCTTGCTTGCTTAGCTATACGAGTCTTCGAGTCTGAGCTTGGTTATTTTTTTCTTTTTTGGGTTGCGATTGAACAAGTCTTTCCCTGCAATTTGTGAACGTTTTTGCTAGATCTGATTAGAAAAAGAAAAATCTGAATTATTTTATATCTATTTTTTTGTTTTTCAGCTAAGCTGGTTGAGTCGCCGCCTGGTTGCTCTTGTCGAGGTTCGATTTGGATCTAGCGTGGAAGAGATAAAGTAGGCCTGTTTAAAAGGTTGAGACTTTTAGTATAGCTATCAGCTTTGTGTTGAGTTGTAGAAGTTTGATCTACTGGGAGAAGCTGAAATTGCAACTTAAATTTGGATACATACTTTGAGTTGGGAAGTTTATTTTGGTATGGAAGCAGTGGTCGTTGTTGAGCAGCATAGGAACCAATATTATGGTGCTCCATTTGGGTCATTCCCGTCCCGAGACTTCAGAGGGGTGAGCTGTAGGAGTTTCCAATCTGGAGCTGGTATACTCCCAACTCCCTCCAAGGCTTCTACCTCTGAAACTAAACACTTCTACCCTTCTTCTCCAAAAACACCACTAACTTGTTTAAGTTCCAACTCCGGAAATGCTAAATCTGGAGCTACTGTGCCAACTGCTCCAATTCCTATCAAACCCAAATTTTTAAACAACAACAGTGTTCTCCATGAAGAATTCTATGATCCAAGTTTCTCCTTCTCTGAGCTTTGGGCTGGACCCACTTATTCAAATTCTCCGCCTCCAAGTTCGTTACCCATTCCCAAATTTTCAGTTGCTAAGAGAACCACGTCTCAGGAGATCCCTCGTTCTGCCCCTGAATTTGTTTTGCATCACCCATCTGCCAAGTCGGCACCACCATCCCCAACTCGAGACCAGAACTTTTCCCCCAGATTTTTCTTTCATAATGATGACTCTGCGACTAAGACTCTACGTCGCATTCTTCATCTTGATGTTGACAATGAATGAACTTCAGGGAGCATCAAGCTTCTGTAAATAGGTTTACTTTTGAGCTGGTTAGTGTTATGTATATAGAACGACTGTTGGTTAGTGGTGACAGTCAAGAGTATCCTCAGTTTTCCGTGCTGTTGGACATCCTTCGATCGCAGGAACAACCAATAGTTAGATGCTGCACCTTAATCCGTGCTTAGATGCTGAACTGGATTTGGTTTGGCAGACAAGACAAGATAGGGCGCGATAGCAACACAGATTAAATCAAGATATTCAGAAGGCAGAAGTAGGGTGTTGGTGAACTTTTTAATCTCTGTTCTGGCCATCATCTCCCAACCACATTCCAGTCTCTATTCCATTCTGTAATTTGTATCATACTGTAGGATCCCAAACTAATGCTTCATTGAAGTTCTGTAGGCTTCTATTTCATTCTTTTCATCCATTCCTTCCTTACATCCTCGGTTCTTGTTGGTTAGGTTCTTTGGCCTCATGGGTTGGTTTTTCGACACTTAAGTCTCTCCTTTTCTTAATATCCTCAATCCTTTTCTTTTGCTCATACCTCCTCTAATCATCTTATAGCTTTTCACTCCTTTGCCTGCGGACTGTGAGGGAGATATTCCTTCTTTACTGCCTTTTCAGTTTTTTTGTAAGACAAGGCGGGGTTCGGATACTAGTTTGCTTCTTCGCAATTACTCCATGTAGCACTTTTCTGTTTTCAGTACCTCTTGGATTTGTCATCTGTGTTCCTGTCTAGTATGGAACTTTCTTATTGGTTTTTGCAAGGTTCGTCTTCCTTCTTGAATATCATTGACCACATGGAGCGGTATATGAGGTAACTCTTTTGTACTGTTAACTTGCTCTATTCGATATATATATATATGTTTATCCCGTTGTTCATTTTCCTTATTGTGCATTGAGCAGACAAGCGAAGGATGAACAGTTCAGGTGATGATTTTCAGTAGTAGTATGGTTGGTTTCCCGTGGACGTAGTTCATCACCGGAGAAAGGCTTCTCAGAAGCGAGTCCAGTTTATGTTTGTGATCCTTGTCTTGAAATCTGTGATCACTTAAAGTCGTACTGTTGGTGTTGGAGTTTGTTTGTTTTTTCGTATCAGTTTGAATGGTAATTGCCTTCGCTTTCTGTGTTTGAAGGGCAATGTTTATTGCAGCTCCCGAAAGTTGAGCAATATTGTAATGTTGATGTTATGTAATGTTTATGTGTGATCTATAAAATACCGTACAAGGTTTCAGTTTGTTAACTACTTACTAATTTGCACTTG

mRNA sequence

GGAGAGCACGCCAGCGTGATGCTTGGGTAGGATATTTAAATGCAGCTCAGATACCGTTTCACATCCGTGGATTCTGGTTCAAACCCTCCTGACTGCTCCATCGCCGTGGCACCACTCTAATCCGATCGTTACTGGTAGAGCTTGTTGACAAAGAATTCCAGTCTAAATCTTCTTTACTGTTCATCTTTATCTTCTATAGATCTTAATCCTACGGAAGAACTTCCTCGATATTTCGGCTAAGCTGGTTGAGTCGCCGCCTGGTTGCTCTTGTCGAGGTTCGATTTGGATCTAGCGTGGAAGAGATAAAGTAGGCCTGTTTAAAAGGTTGAGACTTTTAGTATAGCTATCAGCTTTGTGTTGAGTTGTAGAAGTTTGATCTACTGGGAGAAGCTGAAATTGCAACTTAAATTTGGATACATACTTTGAGTTGGGAAGTTTATTTTGGTATGGAAGCAGTGGTCGTTGTTGAGCAGCATAGGAACCAATATTATGGTGCTCCATTTGGGTCATTCCCGTCCCGAGACTTCAGAGGGGTGAGCTGTAGGAGTTTCCAATCTGGAGCTGGTATACTCCCAACTCCCTCCAAGGCTTCTACCTCTGAAACTAAACACTTCTACCCTTCTTCTCCAAAAACACCACTAACTTGTTTAAGTTCCAACTCCGGAAATGCTAAATCTGGAGCTACTGTGCCAACTGCTCCAATTCCTATCAAACCCAAATTTTTAAACAACAACAGTGTTCTCCATGAAGAATTCTATGATCCAAGTTTCTCCTTCTCTGAGCTTTGGGCTGGACCCACTTATTCAAATTCTCCGCCTCCAAGTTCGTTACCCATTCCCAAATTTTCAGTTGCTAAGAGAACCACGTCTCAGGAGATCCCTCGTTCTGCCCCTGAATTTGTTTTGCATCACCCATCTGCCAAGTCGGCACCACCATCCCCAACTCGAGACCAGAACTTTTCCCCCAGATTTTTCTTTCATAATGATGACTCTGCGACTAAGACTCTACGTCGCATTCTTCATCTTGATGTTGACAATGAATGAACTTCAGGGAGCATCAAGCTTCTGTAAATAGGTTTACTTTTGAGCTGGTTAGTGTTATGTATATAGAACGACTGTTGGTTAGTGGTGACAGTCAAGAGTATCCTCAGTTTTCCGTGCTGTTGGACATCCTTCGATCGCAGGAACAACCAATAGTTAGATGCTGCACCTTAATCCGTGCTTAGATGCTGAACTGGATTTGGTTTGGCAGACAAGACAAGATAGGGCGCGATAGCAACACAGATTAAATCAAGATATTCAGAAGGCAGAAGTAGGGTGTTGGTGAACTTTTTAATCTCTGTTCTGGCCATCATCTCCCAACCACATTCCAGTCTCTATTCCATTCTGTAATTTGTATCATACTGTAGGATCCCAAACTAATGCTTCATTGAAGTTCTGTAGGCTTCTATTTCATTCTTTTCATCCATTCCTTCCTTACATCCTCGGTTCTTGTTGGTTAGGTTCTTTGGCCTCATGGGTTGGTTTTTCGACACTTAAGTCTCTCCTTTTCTTAATATCCTCAATCCTTTTCTTTTGCTCATACCTCCTCTAATCATCTTATAGCTTTTCACTCCTTTGCCTGCGGACTGTGAGGGAGATATTCCTTCTTTACTGCCTTTTCAGTTTTTTTGTAAGACAAGGCGGGGTTCGGATACTAGTTTGCTTCTTCGCAATTACTCCATGTAGCACTTTTCTGTTTTCAGTACCTCTTGGATTTGTCATCTGTGTTCCTGTCTAGTATGGAACTTTCTTATTGGTTTTTGCAAGGTTCGTCTTCCTTCTTGAATATCATTGACCACATGGAGCGGTATATGAGACAAGCGAAGGATGAACAGTTCAGGTGATGATTTTCAGTAGTAGTATGGTTGGTTTCCCGTGGACGTAGTTCATCACCGGAGAAAGGCTTCTCAGAAGCGAGTCCAGTTTATGTTTGTGATCCTTGTCTTGAAATCTGTGATCACTTAAAGTCGTACTGTTGGTGTTGGAGTTTGTTTGTTTTTTCGTATCAGTTTGAATGGTAATTGCCTTCGCTTTCTGTGTTTGAAGGGCAATGTTTATTGCAGCTCCCGAAAGTTGAGCAATATTGTAATGTTGATGTTATGTAATGTTTATGTGTGATCTATAAAATACCGTACAAGGTTTCAGTTTGTTAACTACTTACTAATTTGCACTTG

Coding sequence (CDS)

ATGGAAGCAGTGGTCGTTGTTGAGCAGCATAGGAACCAATATTATGGTGCTCCATTTGGGTCATTCCCGTCCCGAGACTTCAGAGGGGTGAGCTGTAGGAGTTTCCAATCTGGAGCTGGTATACTCCCAACTCCCTCCAAGGCTTCTACCTCTGAAACTAAACACTTCTACCCTTCTTCTCCAAAAACACCACTAACTTGTTTAAGTTCCAACTCCGGAAATGCTAAATCTGGAGCTACTGTGCCAACTGCTCCAATTCCTATCAAACCCAAATTTTTAAACAACAACAGTGTTCTCCATGAAGAATTCTATGATCCAAGTTTCTCCTTCTCTGAGCTTTGGGCTGGACCCACTTATTCAAATTCTCCGCCTCCAAGTTCGTTACCCATTCCCAAATTTTCAGTTGCTAAGAGAACCACGTCTCAGGAGATCCCTCGTTCTGCCCCTGAATTTGTTTTGCATCACCCATCTGCCAAGTCGGCACCACCATCCCCAACTCGAGACCAGAACTTTTCCCCCAGATTTTTCTTTCATAATGATGACTCTGCGACTAAGACTCTACGTCGCATTCTTCATCTTGATGTTGACAATGAATGA

Protein sequence

MEAVVVVEQHRNQYYGAPFGSFPSRDFRGVSCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFLNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFVLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILHLDVDNE
Homology
[Close]
BLAST of Cp4.1LG05g01680 vs. TrEMBL
Match: A0A0A0KHP6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G410620 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.1e-79
Identity = 158/205 (77.07%), Postives = 171/205 (83.41%), Query Frame = 1 

Query: 1   MEAVVVVEQHRNQYYG-------APFGSFPSRDFRGVSCRSFQSGAGILPTPSKASTSET 60
           MEAVVV+EQHRNQYY        A FGS  SRDFRG++CRSFQSGAGILPTP KA  SET
Sbjct: 1   MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSET 60

Query: 61  KHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFLNNNSVLHEEFYDPSFSFSEL 120
           +HFYPS PKTP  CL+SNS N K  AT+ +APIPIKPK  N ++  HEEFYD SFSFSEL
Sbjct: 61  EHFYPS-PKTPPPCLTSNSENRKQLATMRSAPIPIKPKSSNQSNAFHEEFYDRSFSFSEL 120

Query: 121 WAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFVLHHPSAKSAPPSPTRDQNFSP 180
           WAGPTYSNSPPPSSLPIPKFSVAKRTTS E+ RSAPEF +HHPSAKSAPPSPTRDQNFS 
Sbjct: 121 WAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNFSA 180

Query: 181 RFFFHNDDSATKTLRRILHLDVDNE 199
           RFFFH+ DSATKTLRRIL+LDV NE
Sbjct: 181 RFFFHSADSATKTLRRILNLDVANE 204

[Close]
BLAST of Cp4.1LG05g01680 vs. TrEMBL
Match: M5VKQ5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011469mg PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.6e-43
Identity = 110/217 (50.69%), Postives = 137/217 (63.13%), Query Frame = 1 

Query: 1   MEAVVVVEQHRNQYYG-------APFGSFPSRDFRGVSCRSFQSGAGILPTPSK------ 60
           ME ++VV + +NQYY          +G  PS+DFR ++CR+FQSG GILPTPSK      
Sbjct: 1   METLLVVAEPKNQYYNRVKPHGPVRYGPSPSKDFRAINCRTFQSGTGILPTPSKNCSTPV 60

Query: 61  ---ASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFLNNNSVLHEEFY 120
              A +S +K   P   KTP   + S S +   G + P A        +N  S   E+ +
Sbjct: 61  SKRACSSSSKITTPGPNKTPTPSVGSQSDSKTLGKSTPIA--------INVKSSKKEKPF 120

Query: 121 DPSFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSQEIPRSAPEFVLH--HPSAKSA 180
           + SFSFSELWAGP YSNSPPPSSLPIPKFS+  KRT S E+P SA +  +H  HP AKSA
Sbjct: 121 NGSFSFSELWAGPAYSNSPPPSSLPIPKFSIRPKRTVSLELPSSASDMEMHPTHPIAKSA 180

Query: 181 PPSPTRDQNFSPRFFFHNDDSATKTLRRILHLDVDNE 199
           P SPTR+ + S R  FHN DSAT+TLRRIL+LDVD+E
Sbjct: 181 PASPTREHSSSARDLFHNADSATRTLRRILNLDVDDE 209

[Close]
BLAST of Cp4.1LG05g01680 vs. TrEMBL
Match: W9QBH2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002441 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.0e-42
Identity = 109/204 (53.43%), Postives = 128/204 (62.75%), Query Frame = 1 

Query: 1   MEAVVVVEQHRNQYYG-------APFGSFPSRDFRGVSCRSFQSGAGILPTPSKASTSET 60
           ME ++VV +HRNQY           F S PSRDF+G++CRSFQS AGILP+P KA T+  
Sbjct: 1   METLMVVAEHRNQYCSRVKSQGPGRFWSSPSRDFQGINCRSFQSAAGILPSPLKADTTPV 60

Query: 61  KHFYPSSPKTPLTCLSSNS-GNAKSGATVPTAPIPIKPKFLNNNSVLHEEFYDPSFSFSE 120
                SSPKTP  C+ S S     S  T  +API I  K  N      +E  D   SFSE
Sbjct: 61  SKRACSSPKTPSPCVGSASESKTLSRTTAKSAPIAIDFKGPNRRKYFSDEVCDEGLSFSE 120

Query: 121 LWAGPTYSNSPPPSSLPIPKFSV-AKRTTSQEIPRSAPEFVLHHPSAKSAPPSPTRDQNF 180
           LWAGP YSNSPPPSSLPIPKFSV  KRT S E+P   P+ V  HP AKSAP SPTR  + 
Sbjct: 121 LWAGPAYSNSPPPSSLPIPKFSVRPKRTVSLELPGLGPD-VEMHPIAKSAPASPTRGHSP 180

Query: 181 SPRFFFHNDDSATKTLRRILHLDV 196
             +  F + DSAT+TLRRIL+LD+
Sbjct: 181 FTKDIFQSADSATETLRRILNLDI 203

[Close]
BLAST of Cp4.1LG05g01680 vs. TrEMBL
Match: A0A068U5T4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016080001 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.0e-41
Identity = 114/221 (51.58%), Postives = 142/221 (64.25%), Query Frame = 1 

Query: 1   MEAVVVVEQHRNQYYGA-------PFGSF---PSRDFRGVSCRSFQSGAGILPTPSKAST 60
           ME +VVV QHRNQYY         PFGSF   PS+DFRG++CR+FQSG+G+LPTP K+ +
Sbjct: 1   METLVVVAQHRNQYYSRSKGHGPEPFGSFDSPPSKDFRGINCRTFQSGSGLLPTPIKSFS 60

Query: 61  SET--KHFYPS-SPKTPLTCLSSNSGNAKSGATVPTA----PIPIKPKFLNNNSVLHEEF 120
           S    + F PS SPKTP T L S S   K    +  +    PIP+K K   + S L   F
Sbjct: 61  SPVPKRVFSPSFSPKTPSTLLHSRSEEPKKSKKLAKSSSAIPIPMKLKVDVDYSRLASSF 120

Query: 121 YDPSFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSQEIPRSAPEFVLHHPSAKSAP 180
               F+FSE WAGP YSNSPPPSSLPIPKFS+  KRT S ++P S+   +   P AKSAP
Sbjct: 121 -SGEFNFSERWAGPAYSNSPPPSSLPIPKFSLRPKRTVSLDLPSSSASDIDFRPIAKSAP 180

Query: 181 PSPTRDQNFSPRFFFHND-----DSATKTLRRILHLDVDNE 199
            SPTR+++ SP   FH+      DSATKTLRRIL+LD+ ++
Sbjct: 181 ASPTRERSPSPDDLFHDGVSLSVDSATKTLRRILNLDLTDD 220

[Close]
BLAST of Cp4.1LG05g01680 vs. TrEMBL
Match: A0A059AYU2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01463 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 4.5e-41
Identity = 108/210 (51.43%), Postives = 134/210 (63.81%), Query Frame = 1 

Query: 1   MEAVVVVEQHRNQYYG---------APFGSFPSRDFRGVSCRSFQSGA-GILPTPSKAST 60
           ME +VVV QHRN  Y          A F S PSR FR +SCR+FQSGA GILPTP KA  
Sbjct: 1   METLVVVAQHRNHQYSRTKANGGLAAGFESSPSRCFREISCRTFQSGAAGILPTPLKARK 60

Query: 61  SETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFLNNNSVLHEEFYDPSFSF 120
           +      P +     +         K+G+T    PIPIK K +N+ +  ++EF   S SF
Sbjct: 61  TAEIVQAPPAAAAAGSVSDETYLKPKAGST----PIPIKAKPVNDENFFYDEFSSGSMSF 120

Query: 121 SELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSQEIPRSA-PEFVLHHPSAKSAPPSPTRD 180
           +ELWAGP YSNSPPPSSLPIPKFS+  KRT S ++P SA  + V+HHP AKSAP SPT D
Sbjct: 121 AELWAGPAYSNSPPPSSLPIPKFSLRPKRTVSLDLPSSASDDVVMHHPIAKSAPSSPTGD 180

Query: 181 QNFSPRFFFHNDDSATKTLRRILHLDVDNE 199
           +  S + FFH+ DSAT+TLRRIL+LD  ++
Sbjct: 181 RKLSSKAFFHSADSATQTLRRILNLDATDD 206

[Close]
BLAST of Cp4.1LG05g01680 vs. TAIR10
Match: AT4G02715.1 (AT4G02715.1 unknown protein)

HSP 1 Score: 123.2 bits (308), Expect = 1.7e-28
Identity = 95/212 (44.81%), Postives = 123/212 (58.02%), Query Frame = 1 

Query: 1   MEAVVVVEQHRNQYYGAP------FGSFPSRDFRGVSCRSFQSGAGILPTPSK-ASTSET 60
           ME ++V  +HR+QYYG        F S PS+ FR ++CR+FQSG G+LP P + +ST  T
Sbjct: 1   METLIVAVEHRDQYYGKKSLGHDRFRSAPSKTFRQINCRTFQSGVGLLPRPKRTSSTPLT 60

Query: 61  KHFY-----PSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFLNNNSVLHEEFYDP-- 120
           K        P SPK+ L      S    SG    T+PIPI     +       EF D   
Sbjct: 61  KGALSQVQSPRSPKSVLPVFHHPS--VDSGR---TSPIPIANCRGSQIRRCSSEFVDKRR 120

Query: 121 SFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSQEIPRSAPEFVLH-HPSAKSAPPS 180
           S S+SELWAGPTYSNSPPP+S+PIPKFS+  KRT S   P  AP+  +     AKSAP S
Sbjct: 121 SLSYSELWAGPTYSNSPPPASVPIPKFSLQQKRTVSLTFP--APDSAVDIREVAKSAPVS 180

Query: 181 PTRDQNFSPRFFFHNDDSATKTLRRILHLDVD 197
           PT   + +P   F +  SAT TLRR+L+L+++
Sbjct: 181 PTSSGD-NP---FRSTVSATMTLRRMLNLELE 201

[Close]
BLAST of Cp4.1LG05g01680 vs. NCBI nr
Match: gi|700192703|gb|KGN47907.1| (hypothetical protein Csa_6G410620 [Cucumis sativus])

HSP 1 Score: 304.3 bits (778), Expect = 1.6e-79
Identity = 158/205 (77.07%), Postives = 171/205 (83.41%), Query Frame = 1 

Query: 1   MEAVVVVEQHRNQYYG-------APFGSFPSRDFRGVSCRSFQSGAGILPTPSKASTSET 60
           MEAVVV+EQHRNQYY        A FGS  SRDFRG++CRSFQSGAGILPTP KA  SET
Sbjct: 1   MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACNSET 60

Query: 61  KHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFLNNNSVLHEEFYDPSFSFSEL 120
           +HFYPS PKTP  CL+SNS N K  AT+ +APIPIKPK  N ++  HEEFYD SFSFSEL
Sbjct: 61  EHFYPS-PKTPPPCLTSNSENRKQLATMRSAPIPIKPKSSNQSNAFHEEFYDRSFSFSEL 120

Query: 121 WAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFVLHHPSAKSAPPSPTRDQNFSP 180
           WAGPTYSNSPPPSSLPIPKFSVAKRTTS E+ RSAPEF +HHPSAKSAPPSPTRDQNFS 
Sbjct: 121 WAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNFSA 180

Query: 181 RFFFHNDDSATKTLRRILHLDVDNE 199
           RFFFH+ DSATKTLRRIL+LDV NE
Sbjct: 181 RFFFHSADSATKTLRRILNLDVANE 204

[Close]
BLAST of Cp4.1LG05g01680 vs. NCBI nr
Match: gi|659097088|ref|XP_008449435.1| (PREDICTED: uncharacterized protein LOC103491325 [Cucumis melo])

HSP 1 Score: 298.1 bits (762), Expect = 1.1e-77
Identity = 156/205 (76.10%), Postives = 170/205 (82.93%), Query Frame = 1 

Query: 1   MEAVVVVEQHRNQYYG-------APFGSFPSRDFRGVSCRSFQSGAGILPTPSKASTSET 60
           MEAVVV+EQHRNQYY        A FGS  SRDF G++CRSFQSGAGILPTP KA TSET
Sbjct: 1   MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFGGMNCRSFQSGAGILPTPLKACTSET 60

Query: 61  KHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFLNNNSVLHEEFYDPSFSFSEL 120
           +HFYPS PKTP   L+SNS N K  AT  +API IKPK  N ++V HEEFYD SFSFSEL
Sbjct: 61  EHFYPS-PKTPPPFLTSNSENRKQLATARSAPISIKPKLSNQSNVFHEEFYDRSFSFSEL 120

Query: 121 WAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFVLHHPSAKSAPPSPTRDQNFSP 180
           WAGPTYSNSPPPSSLPIPKFSVAKRTTS E+ RSAPEF +HHPSAKSAPPSPTRDQ+FS 
Sbjct: 121 WAGPTYSNSPPPSSLPIPKFSVAKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQDFSA 180

Query: 181 RFFFHNDDSATKTLRRILHLDVDNE 199
           R+FFH+ DSATKTLRRIL+LDVDNE
Sbjct: 181 RYFFHSADSATKTLRRILNLDVDNE 204

[Close]
BLAST of Cp4.1LG05g01680 vs. NCBI nr
Match: gi|645259515|ref|XP_008235398.1| (PREDICTED: flocculation protein FLO11 [Prunus mume])

HSP 1 Score: 187.2 bits (474), Expect = 2.8e-44
Identity = 112/217 (51.61%), Postives = 139/217 (64.06%), Query Frame = 1 

Query: 1   MEAVVVVEQHRNQYYG-------APFGSFPSRDFRGVSCRSFQSGAGILPTPSK------ 60
           ME ++VV + +NQYY        A +G  PS+DFR ++CR+FQSG GILPTPSK      
Sbjct: 1   METLLVVAEPKNQYYNRVKPHGPARYGPSPSKDFRAINCRTFQSGTGILPTPSKNCSTPV 60

Query: 61  ---ASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFLNNNSVLHEEFY 120
              A +S +K   PS  KTP   + S S +   G + P A        +N  S   E+ +
Sbjct: 61  SKRACSSSSKITTPSPNKTPTPSVGSQSDSKTLGKSTPIA--------INVKSSKKEKPF 120

Query: 121 DPSFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSQEIPRSAPEFVLH--HPSAKSA 180
           + SFSFSELWAGP YSNSPPPSSLPIPKFS+  KRT S E+P SA +  +H  HP AKSA
Sbjct: 121 NGSFSFSELWAGPAYSNSPPPSSLPIPKFSIRPKRTVSLELPSSASDMEMHPTHPIAKSA 180

Query: 181 PPSPTRDQNFSPRFFFHNDDSATKTLRRILHLDVDNE 199
           P SPTR+ + S R  FHN DSAT+TLRRIL+LDVD+E
Sbjct: 181 PASPTREHSSSARDLFHNADSATRTLRRILNLDVDDE 209

[Close]
BLAST of Cp4.1LG05g01680 vs. NCBI nr
Match: gi|1009147624|ref|XP_015891511.1| (PREDICTED: uncharacterized protein LOC107425950, partial [Ziziphus jujuba])

HSP 1 Score: 186.8 bits (473), Expect = 3.6e-44
Identity = 110/197 (55.84%), Postives = 128/197 (64.97%), Query Frame = 1 

Query: 1   MEAVVVVEQHRNQYYG-------APFGSFPSRDFRGVSCRSFQSGAGILPTPSKASTSET 60
           ME +VVV QHRNQYY        A +GS PSRDFRG++CRSFQS AG+LPTP KA TS  
Sbjct: 1   METLVVVAQHRNQYYSRGKPQGPARYGSSPSRDFRGINCRSFQSAAGLLPTPFKACTSPV 60

Query: 61  KHFYPSSPKTPLTCLSSNSGNAKSGAT-VPTAPIPIKPKFLNNNSVLHEEFYDPSFSFSE 120
                SSPKTP+  L S++ N     T   + PI I     +      EE  + + SFSE
Sbjct: 61  SKRACSSPKTPIPSLYSHTDNKTRSLTKAKSTPIAINVNASDKGKHFSEEVSEETLSFSE 120

Query: 121 LWAGPTYSNSPPPSSLPIPKFSV-AKRTTSQEIPRSAPEFVLHHPSAKSAPPSPTRDQNF 180
           LWAGP YSNSPPPSSLPIPKFSV  KRT S E+P SAPE  + HP AKSAPPSPTR+ N 
Sbjct: 121 LWAGPAYSNSPPPSSLPIPKFSVRPKRTVSLELPGSAPEIEM-HPMAKSAPPSPTREHNP 180

Query: 181 SPRFFFHNDDSATKTLR 189
           S R  F + + ATKTL+
Sbjct: 181 SKRDLFLSAECATKTLK 196

[Close]
BLAST of Cp4.1LG05g01680 vs. NCBI nr
Match: gi|694383321|ref|XP_009367623.1| (PREDICTED: uncharacterized protein LOC103957221 [Pyrus x bretschneideri])

HSP 1 Score: 185.7 bits (470), Expect = 8.1e-44
Identity = 111/210 (52.86%), Postives = 138/210 (65.71%), Query Frame = 1 

Query: 1   MEAVVVVEQHRNQYYG-------APFGSFPSRDFRGVSCRSFQSGAGILPTPSKA-STSE 60
           ME ++VV QH+NQYYG          G  PS+DFRG++CR+FQSG+GILPTPSKA ST  
Sbjct: 1   METLLVVAQHKNQYYGQGKPHGPGRVGPSPSKDFRGINCRTFQSGSGILPTPSKACSTPV 60

Query: 61  TKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIK--PKFLNNNSVLHEEFYDPSFSF 120
           +K    S     +T  S N  +  S  +   +   I+  P  +N N+    + ++ SFSF
Sbjct: 61  SKQGACSGSPPRITTPSPNKIHTSSPVSQSDSRTLIRSSPIAINVNNSKKGKHFNGSFSF 120

Query: 121 SELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSQEIPRSAPEFVLHHPSAKSAPPSPTRDQ 180
           SELWAGP YSNSPPPSSLPIPKFS+  KRT S E+P+S  +  +HHP AKS P SPTR+ 
Sbjct: 121 SELWAGPAYSNSPPPSSLPIPKFSIRPKRTVSLELPKSPADIEMHHPIAKSTPASPTREH 180

Query: 181 -NFSPRFFFHNDDSATKTLRRILHLDVDNE 199
              S R  FHN DSATKTLRRIL+LDVD+E
Sbjct: 181 GGSSARDLFHNADSATKTLRRILNLDVDDE 210

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g01680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG05g01680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHP6_CUCSA1.1e-7977.07Uncharacterized protein OS=Cucumis sativus GN=Csa_6G410620 PE=4 SV=1[more]
M5VKQ5_PRUPE1.6e-4350.69Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011469mg PE=4 SV=1[more]
W9QBH2_9ROSA4.0e-4253.43Uncharacterized protein OS=Morus notabilis GN=L484_002441 PE=4 SV=1[more]
A0A068U5T4_COFCA2.0e-4151.58Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016080001 PE=4 SV=1[more]
A0A059AYU2_EUCGR4.5e-4151.43Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01463 PE=4 SV=1[more]
BLAST of Cp4.1LG05g01680 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G02715.11.7e-2844.81 unknown protein[more]
BLAST of Cp4.1LG05g01680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192703|gb|KGN47907.1|1.6e-7977.07hypothetical protein Csa_6G410620 [Cucumis sativus][more]
gi|659097088|ref|XP_008449435.1|1.1e-7776.10PREDICTED: uncharacterized protein LOC103491325 [Cucumis melo][more]
gi|645259515|ref|XP_008235398.1|2.8e-4451.61PREDICTED: flocculation protein FLO11 [Prunus mume][more]
gi|1009147624|ref|XP_015891511.1|3.6e-4455.84PREDICTED: uncharacterized protein LOC107425950, partial [Ziziphus jujuba][more]
gi|694383321|ref|XP_009367623.1|8.1e-4452.86PREDICTED: uncharacterized protein LOC103957221 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g01680.1Cp4.1LG05g01680.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35306FAMILY NOT NAMEDcoord: 2..198
score: 1.4
NoneNo IPR availablePANTHERPTHR35306:SF1SUBFAMILY NOT NAMEDcoord: 2..198
score: 1.4
NoneNo IPR availablePFAMPF15365PNRCcoord: 113..192
score: 5.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g01680CmaCh19G000330Cucurbita maxima (Rimu)cmacpeB543
Cp4.1LG05g01680CmaCh02G017960Cucurbita maxima (Rimu)cmacpeB647
Cp4.1LG05g01680CmoCh19G000310Cucurbita moschata (Rifu)cmocpeB505
Cp4.1LG05g01680CmoCh02G018410Cucurbita moschata (Rifu)cmocpeB596
Cp4.1LG05g01680Cla006047Watermelon (97103) v1cpewmB700
Cp4.1LG05g01680Cla014775Watermelon (97103) v1cpewmB688
Cp4.1LG05g01680ClCG07G000350Watermelon (Charleston Gray)cpewcgB683
Cp4.1LG05g01680ClCG09G007200Watermelon (Charleston Gray)cpewcgB629
Cp4.1LG05g01680CSPI06G22100Wild cucumber (PI 183967)cpecpiB751
Cp4.1LG05g01680Lsi05G009420Bottle gourd (USVL1VR-Ls)cpelsiB616
Cp4.1LG05g01680Lsi02G022790Bottle gourd (USVL1VR-Ls)cpelsiB613
Cp4.1LG05g01680Bhi05G000233Wax gourdcpewgoB0936
Cp4.1LG05g01680Carg16835Silver-seed gourdcarcpeB1063
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g01680Cucumber (Gy14) v2cgybcpeB851
Cp4.1LG05g01680Melon (DHL92) v3.6.1cpemedB826
Cp4.1LG05g01680Melon (DHL92) v3.6.1cpemedB828
Cp4.1LG05g01680Silver-seed gourdcarcpeB1062
Cp4.1LG05g01680Cucumber (Chinese Long) v3cpecucB0929
Cp4.1LG05g01680Cucurbita pepo (Zucchini)cpecpeB281
Cp4.1LG05g01680Cucurbita pepo (Zucchini)cpecpeB273
Cp4.1LG05g01680Cucumber (Gy14) v1cgycpeB0514
Cp4.1LG05g01680Cucurbita maxima (Rimu)cmacpeB550
Cp4.1LG05g01680Cucurbita moschata (Rifu)cmocpeB498
Cp4.1LG05g01680Cucumber (Chinese Long) v2cpecuB748
Cp4.1LG05g01680Melon (DHL92) v3.5.1cpemeB695
Cp4.1LG05g01680Melon (DHL92) v3.5.1cpemeB692