Cp4.1LG05g01190 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG05g01190
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG05 : 367276 .. 368543 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAGACAACTCATCCTCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCTCCCTACTCTCATGCTCATTTGATTTCATGGCTAATTTCCATGCTTTTTTGCCTCATTTCGGCCTCCATTTGGGGTTCCATTCTTTCATTTTGAGCCCTTTTCTTCCCACTTTGGCTCACTTTTGAAGCTCTCAAAGCTTTGATTTGATCCAATCTTCTTCCCCAAAAGCACAGACCAAAGCAGATCACTTCAGTCCTCCACAAAAATGTCTAATAACAATAAAATGAAAGGCCTCCTCAAAGGCCTCAGATACATTTCTCAAATATTTGGTAAGCAAATAAAATTTAAAAATTGAAAAAAAACCCATTTCCCCCCTTCTTTCTCTCATAAAAATAATAATAATAATAAAACCTGAATTTTTGCAGATAATGAGAAAGAACCTGAAATGCAGATTGGTGTACCCACAGATGTCAAACATGTTGCCCATATTGGATGGGATGGTCCTTCAGTCAATTCTCCAAGCTGGGTATATCCATATATATATATATATATATATCAATAAATAAATCTTATATCTTAAAATATATATACATAATCATTCATTAAATTTCTTTAAATTAAAAAAAAAATTGAAAATTTATAATTATTTGTATGGTGTTCTTACGAGCAAGTGAATGCAGATGACTGAATTCAAAGGTGATCCTGGAGATGCCTCTGGCCAATTGGCTTCTCAAGGTATCATTTATTTGCTTTTTTTTGTATTTTTTATGTTCTTTACTAAATTTTTCTTTCTAGTTTCATAATGTTTACGCAATTTTAAATGAATTTTTTAATAAATAAAAATATGTTTTGGGTTTTATTATAAATTATTTTCACCCTTTGTGTGGGGAAATTAATTGCTGTAATGGATTCCGGAGACATTCAAGAAGTAATATGGCAGATACGAACCACACGGCTCGGGATATGCCGGAGATACCAAAAGCATCGAGAAGACAGTCATCAACTGTCGGCGGCAGTGCGGGGGATTCTCCGACAAGGGAGAAATCGGAGAAGACAAGGTCAAAGAAATCTTCAAAGTCCAAGGAATCGTCTACGTCGGATGGCATTAGACCGTCGCACCGAAGCTCCGAACTGTCCCAGGGCGGCGAGTCGGGGGCTCCGAAGAAAGCGCGACGGAAGAAATCGAAGGAAGACGGATCGACGAGATCGAGATCAAAAGGTGCGGCGGCGGATATT

mRNA sequence

TCAGACAACTCATCCTCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCTCCCTACTCTCATGCTCATTTGATTTCATGGCTAATTTCCATGCTTTTTTGCCTCATTTCGGCCTCCATTTGGGGTTCCATTCTTTCATTTTGAGCCCTTTTCTTCCCACTTTGGCTCACTTTTGAAGCTCTCAAAGCTTTGATTTGATCCAATCTTCTTCCCCAAAAGCACAGACCAAAGCAGATCACTTCAGTCCTCCACAAAAATGTCTAATAACAATAAAATGAAAGGCCTCCTCAAAGGCCTCAGATACATTTCTCAAATATTTGATAATGAGAAAGAACCTGAAATGCAGATTGGTGTACCCACAGATGTCAAACATGTTGCCCATATTGGATGGGATGGTCCTTCAGTCAATTCTCCAAGCTGGACATTCAAGAAGTAATATGGCAGATACGAACCACACGGCTCGGGATATGCCGGAGATACCAAAAGCATCGAGAAGACAGTCATCAACTGTCGGCGGCAGTGCGGGGGATTCTCCGACAAGGGAGAAATCGGAGAAGACAAGGTCAAAGAAATCTTCAAAGTCCAAGGAATCGTCTACGTCGGATGGCATTAGACCGTCGCACCGAAGCTCCGAACTGTCCCAGGGCGGCGAGTCGGGGGCTCCGAAGAAAGCGCGACGGAAGAAATCGAAGGAAGACGGATCGACGAGATCGAGATCAAAAGGTGCGGCGGCGGATATT

Coding sequence (CDS)

ATGAGAAAGAACCTGAAATGCAGATTGGTGTACCCACAGATGTCAAACATGTTGCCCATATTGGATGGGATGGTCCTTCAGTCAATTCTCCAAGCTGGACATTCAAGAAGTAATATGGCAGATACGAACCACACGGCTCGGGATATGCCGGAGATACCAAAAGCATCGAGAAGACAGTCATCAACTGTCGGCGGCAGTGCGGGGGATTCTCCGACAAGGGAGAAATCGGAGAAGACAAGGTCAAAGAAATCTTCAAAGTCCAAGGAATCGTCTACGTCGGATGGCATTAGACCGTCGCACCGAAGCTCCGAACTGTCCCAGGGCGGCGAGTCGGGGGCTCCGAAGAAAGCGCGACGGAAGAAATCGAAGGAAGACGGATCGACGAGATCGAGATCAAAAGGTGCGGCGGCGGATATT

Protein sequence

MRKNLKCRLVYPQMSNMLPILDGMVLQSILQAGHSRSNMADTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSKSKESSTSDGIRPSHRSSELSQGGESGAPKKARRKKSKEDGSTRSRSKGAAADI
BLAST of Cp4.1LG05g01190 vs. TrEMBL
Match: A0A0A0L7D1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G374200 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-20
Identity = 69/111 (62.16%), Postives = 87/111 (78.38%), Query Frame = 1

Query: 35  SRSNMADTNHTARDMPEIPKASRRQSSTVGGSAGDSPT-REKSEKTRSKKSSKSKESSTS 94
           S+ +  D   T+RDMPE+PK+S+RQSSTVGGS  +SPT R+KSEK +SKKSSK++ESS+S
Sbjct: 76  SQDSKRDMAVTSRDMPELPKSSKRQSSTVGGSVAESPTMRDKSEKVKSKKSSKARESSSS 135

Query: 95  DGIRPSHRSSELSQGGES------GAPKKARRKKSKEDGSTRSRSKGAAAD 139
           D I PS R+S+L+QG ES      G PKK RRKKSKE+GST+SRSK  AA+
Sbjct: 136 DNIGPSRRNSDLNQGSESPTESLPGVPKKGRRKKSKEEGSTKSRSKATAAE 186

BLAST of Cp4.1LG05g01190 vs. TrEMBL
Match: W9R0G2_9ROSA (TBC1 domain family member 15 OS=Morus notabilis GN=L484_005926 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.0e-07
Identity = 52/111 (46.85%), Postives = 70/111 (63.06%), Query Frame = 1

Query: 35  SRSNMADTNHTARDMPEIPKASRRQSSTVGGSAG-DSPTREKSEKTRSKKSSKSKESSTS 94
           SR +    N   RD+P++PKASRR  ST G ++G +SPTREK EKTR ++SSK+     +
Sbjct: 222 SRRSGRVPNSPVRDLPDLPKASRRLQSTDGANSGIESPTREKVEKTRQRRSSKNASRDPT 281

Query: 95  DGIRPSHRSSELSQGGES------GAPKKARRKKSKE-DGSTRSRSKGAAA 138
           D  R   RS + + G ES        PKK++RKKSK+  GS+RSRSK  A+
Sbjct: 282 DSPRQGRRSMDSNSGVESPSRNLPDVPKKSQRKKSKDGGGSSRSRSKAQAS 332

BLAST of Cp4.1LG05g01190 vs. TrEMBL
Match: A0A067K3W4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17662 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-06
Identity = 51/115 (44.35%), Postives = 70/115 (60.87%), Query Frame = 1

Query: 32  AGHSRSNMADTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKT--RSKKSSKSKE 91
           A   R +        RD+P++PK++RR SST  G  GDSPT+EKSEK+  +S+KSS+S  
Sbjct: 82  ASSQRGSRGSQTGRDRDLPDLPKSARRHSST--GGIGDSPTKEKSEKSEKKSRKSSRSGA 141

Query: 92  SSTSDGIRPSHRSSELSQGGESGA-----PKKARRKKSKEDGSTRSRSKGAAADI 140
              +DG + S R  + S GG+S +     PKKARRKKSK+     SRSK  A ++
Sbjct: 142 KDLADG-KTSSRQKDGSLGGDSSSNPSDLPKKARRKKSKDASGKSSRSKAQAQEV 193

BLAST of Cp4.1LG05g01190 vs. NCBI nr
Match: gi|778680973|ref|XP_011651433.1| (PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 2.0e-20
Identity = 69/111 (62.16%), Postives = 87/111 (78.38%), Query Frame = 1

Query: 35  SRSNMADTNHTARDMPEIPKASRRQSSTVGGSAGDSPT-REKSEKTRSKKSSKSKESSTS 94
           S+ +  D   T+RDMPE+PK+S+RQSSTVGGS  +SPT R+KSEK +SKKSSK++ESS+S
Sbjct: 76  SQDSKRDMAVTSRDMPELPKSSKRQSSTVGGSVAESPTMRDKSEKVKSKKSSKARESSSS 135

Query: 95  DGIRPSHRSSELSQGGES------GAPKKARRKKSKEDGSTRSRSKGAAAD 139
           D I PS R+S+L+QG ES      G PKK RRKKSKE+GST+SRSK  AA+
Sbjct: 136 DNIGPSRRNSDLNQGSESPTESLPGVPKKGRRKKSKEEGSTKSRSKATAAE 186

BLAST of Cp4.1LG05g01190 vs. NCBI nr
Match: gi|659093676|ref|XP_008447656.1| (PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis melo])

HSP 1 Score: 104.0 bits (258), Expect = 2.2e-19
Identity = 67/101 (66.34%), Postives = 84/101 (83.17%), Query Frame = 1

Query: 45  TARDMPEIPKASRRQSSTVGGSAGDSPT-REKSEKTRSKKSSKSKESSTSDGIRPSHRSS 104
           T+RD+PE+PK+SRRQSST+GG+  +SPT R+KSEK +SKKSSK+KESS+SD + PS R+S
Sbjct: 132 TSRDLPELPKSSRRQSSTLGGTVAESPTMRDKSEKAKSKKSSKAKESSSSDIMGPSRRNS 191

Query: 105 ELSQGGES------GAPKKARRKKSKEDGSTRSRSKGAAAD 139
           +L+QG ES      G PKKARRKKSKE+GSTRSRSK  AA+
Sbjct: 192 DLNQGCESTTESLPGVPKKARRKKSKEEGSTRSRSKATAAE 232

BLAST of Cp4.1LG05g01190 vs. NCBI nr
Match: gi|703086674|ref|XP_010093068.1| (TBC1 domain family member 15 [Morus notabilis])

HSP 1 Score: 63.2 bits (152), Expect = 4.3e-07
Identity = 52/111 (46.85%), Postives = 70/111 (63.06%), Query Frame = 1

Query: 35  SRSNMADTNHTARDMPEIPKASRRQSSTVGGSAG-DSPTREKSEKTRSKKSSKSKESSTS 94
           SR +    N   RD+P++PKASRR  ST G ++G +SPTREK EKTR ++SSK+     +
Sbjct: 222 SRRSGRVPNSPVRDLPDLPKASRRLQSTDGANSGIESPTREKVEKTRQRRSSKNASRDPT 281

Query: 95  DGIRPSHRSSELSQGGES------GAPKKARRKKSKE-DGSTRSRSKGAAA 138
           D  R   RS + + G ES        PKK++RKKSK+  GS+RSRSK  A+
Sbjct: 282 DSPRQGRRSMDSNSGVESPSRNLPDVPKKSQRKKSKDGGGSSRSRSKAQAS 332

BLAST of Cp4.1LG05g01190 vs. NCBI nr
Match: gi|802724798|ref|XP_012085852.1| (PREDICTED: CRIB domain-containing protein RIC6 [Jatropha curcas])

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-06
Identity = 51/115 (44.35%), Postives = 70/115 (60.87%), Query Frame = 1

Query: 32  AGHSRSNMADTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKT--RSKKSSKSKE 91
           A   R +        RD+P++PK++RR SST  G  GDSPT+EKSEK+  +S+KSS+S  
Sbjct: 76  ASSQRGSRGSQTGRDRDLPDLPKSARRHSST--GGIGDSPTKEKSEKSEKKSRKSSRSGA 135

Query: 92  SSTSDGIRPSHRSSELSQGGESGA-----PKKARRKKSKEDGSTRSRSKGAAADI 140
              +DG + S R  + S GG+S +     PKKARRKKSK+     SRSK  A ++
Sbjct: 136 KDLADG-KTSSRQKDGSLGGDSSSNPSDLPKKARRKKSKDASGKSSRSKAQAQEV 187

BLAST of Cp4.1LG05g01190 vs. NCBI nr
Match: gi|643713839|gb|KDP26504.1| (hypothetical protein JCGZ_17662 [Jatropha curcas])

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-06
Identity = 51/115 (44.35%), Postives = 70/115 (60.87%), Query Frame = 1

Query: 32  AGHSRSNMADTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKT--RSKKSSKSKE 91
           A   R +        RD+P++PK++RR SST  G  GDSPT+EKSEK+  +S+KSS+S  
Sbjct: 82  ASSQRGSRGSQTGRDRDLPDLPKSARRHSST--GGIGDSPTKEKSEKSEKKSRKSSRSGA 141

Query: 92  SSTSDGIRPSHRSSELSQGGESGA-----PKKARRKKSKEDGSTRSRSKGAAADI 140
              +DG + S R  + S GG+S +     PKKARRKKSK+     SRSK  A ++
Sbjct: 142 KDLADG-KTSSRQKDGSLGGDSSSNPSDLPKKARRKKSKDASGKSSRSKAQAQEV 193

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L7D1_CUCSA1.4e-2062.16Uncharacterized protein OS=Cucumis sativus GN=Csa_3G374200 PE=4 SV=1[more]
W9R0G2_9ROSA3.0e-0746.85TBC1 domain family member 15 OS=Morus notabilis GN=L484_005926 PE=4 SV=1[more]
A0A067K3W4_JATCU1.5e-0644.35Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17662 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|778680973|ref|XP_011651433.1|2.0e-2062.16PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis sativus][more]
gi|659093676|ref|XP_008447656.1|2.2e-1966.34PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis melo][more]
gi|703086674|ref|XP_010093068.1|4.3e-0746.85TBC1 domain family member 15 [Morus notabilis][more]
gi|802724798|ref|XP_012085852.1|2.1e-0644.35PREDICTED: CRIB domain-containing protein RIC6 [Jatropha curcas][more]
gi|643713839|gb|KDP26504.1|2.1e-0644.35hypothetical protein JCGZ_17662 [Jatropha curcas][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g01190.1Cp4.1LG05g01190.1mRNA


The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g01190Cucurbita pepo (Zucchini)cpecpeB189
Cp4.1LG05g01190Cucurbita pepo (Zucchini)cpecpeB273
Cp4.1LG05g01190Cucurbita pepo (Zucchini)cpecpeB340
Cp4.1LG05g01190Cucurbita pepo (Zucchini)cpecpeB478
Cp4.1LG05g01190Cucurbita pepo (Zucchini)cpecpeB507
Cp4.1LG05g01190Cucumber (Gy14) v1cgycpeB0683
Cp4.1LG05g01190Cucumber (Gy14) v1cgycpeB1011
Cp4.1LG05g01190Cucurbita maxima (Rimu)cmacpeB290
Cp4.1LG05g01190Cucurbita maxima (Rimu)cmacpeB407
Cp4.1LG05g01190Cucurbita maxima (Rimu)cmacpeB843
Cp4.1LG05g01190Cucurbita maxima (Rimu)cmacpeB930
Cp4.1LG05g01190Cucurbita moschata (Rifu)cmocpeB252
Cp4.1LG05g01190Cucurbita moschata (Rifu)cmocpeB369
Cp4.1LG05g01190Cucurbita moschata (Rifu)cmocpeB791
Cp4.1LG05g01190Cucurbita moschata (Rifu)cmocpeB865
Cp4.1LG05g01190Wild cucumber (PI 183967)cpecpiB716
Cp4.1LG05g01190Wild cucumber (PI 183967)cpecpiB726
Cp4.1LG05g01190Cucumber (Chinese Long) v2cpecuB715
Cp4.1LG05g01190Cucumber (Chinese Long) v2cpecuB723
Cp4.1LG05g01190Cucumber (Chinese Long) v2cpecuB724
Cp4.1LG05g01190Bottle gourd (USVL1VR-Ls)cpelsiB584
Cp4.1LG05g01190Bottle gourd (USVL1VR-Ls)cpelsiB617
Cp4.1LG05g01190Watermelon (Charleston Gray)cpewcgB679
Cp4.1LG05g01190Watermelon (Charleston Gray)cpewcgB682
Cp4.1LG05g01190Watermelon (Charleston Gray)cpewcgB683
Cp4.1LG05g01190Watermelon (97103) v1cpewmB700
Cp4.1LG05g01190Watermelon (97103) v1cpewmB706
Cp4.1LG05g01190Watermelon (97103) v1cpewmB752
Cp4.1LG05g01190Melon (DHL92) v3.5.1cpemeB694
Cp4.1LG05g01190Melon (DHL92) v3.5.1cpemeB690
Cp4.1LG05g01190Melon (DHL92) v3.5.1cpemeB702
Cp4.1LG05g01190Cucumber (Gy14) v2cgybcpeB249
Cp4.1LG05g01190Cucumber (Gy14) v2cgybcpeB432
Cp4.1LG05g01190Melon (DHL92) v3.6.1cpemedB822
Cp4.1LG05g01190Melon (DHL92) v3.6.1cpemedB825
Cp4.1LG05g01190Melon (DHL92) v3.6.1cpemedB834
Cp4.1LG05g01190Silver-seed gourdcarcpeB0328
Cp4.1LG05g01190Silver-seed gourdcarcpeB0335
Cp4.1LG05g01190Silver-seed gourdcarcpeB1062
Cp4.1LG05g01190Silver-seed gourdcarcpeB1332
Cp4.1LG05g01190Silver-seed gourdcarcpeB1506
Cp4.1LG05g01190Cucumber (Chinese Long) v3cpecucB0889
Cp4.1LG05g01190Cucumber (Chinese Long) v3cpecucB0901
Cp4.1LG05g01190Wax gourdcpewgoB0922
Cp4.1LG05g01190Wax gourdcpewgoB0927