Cp4.1LG05g01030 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g01030
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionKetohexokinase
LocationCp4.1LG05 : 471509 .. 472618 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAGTGGCGAAGTTGAGAGCTAATGATATAGGGACAATGTGTGGAAAGCTGGTAGTGGGAACGGCCGAAGAAAGTGTACGTCTCTGAAATTGTTGATACTACTGCAACTGGAGATGCATTCATTGGAATGGTTGTATATGTTTTCTTGAAACGAGTATTTACTTTCGTACCTTTGTGATCCTTTAATTTCCTGGTGACTGTTATTTTCTTGAGAAATCTGGTGTGCAAATTGTATTTTTCCAATGTTCTCTGCATAAAGTTTGTATTTAAGTCCAATTTCAGACCAAAATTTGTGCTGTTAAACAGGTTTTACGGTCAGAAAAATGAAAAAGAAAGGTAGAAAAGCTCAGGGCGGGATCACCGGAAGCTTTCTTCCTTGATGATATAGTCACAAAGGTTAGCTTTCTTAACTAATACTTTTTTGTGCTTCAAACTTCGAAGTATATAGAGTTTCTTTCCTGTGCATTTCGCATTTGGGGATTTAAACTGTTGAACTCCTGATGAAGGAAATTATAATGCATTACATGATGAACCATTCTTTTAGTCTCAGTTCTTTATGTTAATGGAAATTGACATGGTATAGAATTTTACTGAATAATTCTTTGGATCGGCAATGACATTTCAAATGACATTAGAGACAACTAGGATCAGCACTGCCTTTTCCCTCTAGATCTCCCCCATATGAACGTCACCTTATGGTCAGCCTCAAACCAAGGCCGACCAGGAACTTGAGCTTCCGCCCAAACTTTTCCTTGCTCTTGTTTGGTGGCCCAGTATTTTCATGCTTCATGCTTCAACCTATTTTATTTCATGTTAGATTTTTTTTCTTTATTTGGTTCTTGATTTTTTCGGTCTCCTATTCTTGTCCTATAATCTAATTTCGGTCATAACATTAGCTTCACTCCTTGATTGAGATTTCTTGATTGAGATTTATGATTTAGCTAAGAGTAAGAATACTAAGTTCAATTTAGGATTTTTTTTTTCCTCAATTTTAGTTTATCATTTTTTTTTAGATATTTTTATTTAAATTTATGATATTCTTTCTTTCTAATTTTTTTGTGATATGAGATAATCCTTGAATTGCTTTTAGGATTGTCATCAAATTCGTAG

mRNA sequence

CCAGTGGCGAAGTTGAGAGCTAATGATATAGGGACAATGTGTGGAAAGCTGTGGGAACGGCCGAAGAAAGTGTACGTCTCTGAAATTGTTGATACTACTGCAACTGGAGATGCATTCATTGGAATGGTTGTATATGTTTTCTTGAAACGAATAATCCTTGAATTGCTTTTAGGATTGTCATCAAATTCGTAG

Coding sequence (CDS)

CCAGTGGCGAAGTTGAGAGCTAATGATATAGGGACAATGTGTGGAAAGCTGTGGGAACGGCCGAAGAAAGTGTACGTCTCTGAAATTGTTGATACTACTGCAACTGGAGATGCATTCATTGGAATGGTTGTATATGTTTTCTTGAAACGAATAATCCTTGAATTGCTTTTAGGATTGTCATCAAATTCGTAG

Protein sequence

PVAKLRANDIGTMCGKLWERPKKVYVSEIVDTTATGDAFIGMVVYVFLKRIILELLLGLSSNS
Homology
[Close]
BLAST of Cp4.1LG05g01030 vs. TrEMBL
Match: A0A0A0LE05_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G613430 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 5.6e-06
Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 1 

Query: 1  PVAKLRANDIGTMCGKLW-ERPKKVYVSEIVDTTATGDAFIGMVVYVFLKRIILELLLGL 60
          PVAKLRA  IGT+CG+L     +K+  SEIVDTT  GDAFIG V+Y     +  E LL  
Sbjct: 4  PVAKLRAQGIGTVCGRLLLGTAEKIPESEIVDTTGAGDAFIGAVLYALCANMPPEKLLPF 63

Query: 61 SS 62
          S+
Sbjct: 64 SA 65

[Close]
BLAST of Cp4.1LG05g01030 vs. TAIR10
Match: AT4G28706.4 (AT4G28706.4 pfkB-like carbohydrate kinase family protein)

HSP 1 Score: 48.1 bits (113), Expect = 2.3e-06
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 1 

Query: 4   KLRANDIGTMCGKLW-ERPKKVYVSEIVDTTATGDAFIGMVVY 46
           KL+AN +GTM G+L+    +K+   E+VDTT  GDAFIG V+Y
Sbjct: 317 KLKANGVGTMTGRLFLGTAEKIPPEELVDTTGAGDAFIGAVLY 359

[Close]
BLAST of Cp4.1LG05g01030 vs. NCBI nr
Match: gi|700203188|gb|KGN58321.1| (hypothetical protein Csa_3G613430 [Cucumis sativus])

HSP 1 Score: 57.8 bits (138), Expect = 8.1e-06
Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 1 

Query: 1  PVAKLRANDIGTMCGKLW-ERPKKVYVSEIVDTTATGDAFIGMVVYVFLKRIILELLLGL 60
          PVAKLRA  IGT+CG+L     +K+  SEIVDTT  GDAFIG V+Y     +  E LL  
Sbjct: 4  PVAKLRAQGIGTVCGRLLLGTAEKIPESEIVDTTGAGDAFIGAVLYALCANMPPEKLLPF 63

Query: 61 SS 62
          S+
Sbjct: 64 SA 65

[Close]
BLAST of Cp4.1LG05g01030 vs. NCBI nr
Match: gi|659093068|ref|XP_008447354.1| (PREDICTED: ribokinase isoform X2 [Cucumis melo])

HSP 1 Score: 57.8 bits (138), Expect = 8.1e-06
Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 1 

Query: 1   PVAKLRANDIGTMCGKLW-ERPKKVYVSEIVDTTATGDAFIGMVVYVFLKRIILELLLGL 60
           PVAKLRA  IGT+CG+L     +K+  SEIVDTT  GDAFIG V+Y     +  E LL  
Sbjct: 282 PVAKLRAEGIGTVCGRLLLGTAEKIPESEIVDTTGAGDAFIGAVLYALCANMPPEKLLPF 341

Query: 61  SS 62
           S+
Sbjct: 342 SA 343

[Close]
BLAST of Cp4.1LG05g01030 vs. NCBI nr
Match: gi|449468600|ref|XP_004152009.1| (PREDICTED: ribokinase [Cucumis sativus])

HSP 1 Score: 57.8 bits (138), Expect = 8.1e-06
Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 1 

Query: 1   PVAKLRANDIGTMCGKLW-ERPKKVYVSEIVDTTATGDAFIGMVVYVFLKRIILELLLGL 60
           PVAKLRA  IGT+CG+L     +K+  SEIVDTT  GDAFIG V+Y     +  E LL  
Sbjct: 313 PVAKLRAQGIGTVCGRLLLGTAEKIPESEIVDTTGAGDAFIGAVLYALCANMPPEKLLPF 372

Query: 61  SS 62
           S+
Sbjct: 373 SA 374

[Close]
BLAST of Cp4.1LG05g01030 vs. NCBI nr
Match: gi|659093065|ref|XP_008447353.1| (PREDICTED: ribokinase isoform X1 [Cucumis melo])

HSP 1 Score: 57.8 bits (138), Expect = 8.1e-06
Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 1 

Query: 1   PVAKLRANDIGTMCGKLW-ERPKKVYVSEIVDTTATGDAFIGMVVYVFLKRIILELLLGL 60
           PVAKLRA  IGT+CG+L     +K+  SEIVDTT  GDAFIG V+Y     +  E LL  
Sbjct: 312 PVAKLRAEGIGTVCGRLLLGTAEKIPESEIVDTTGAGDAFIGAVLYALCANMPPEKLLPF 371

Query: 61  SS 62
           S+
Sbjct: 372 SA 373

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g01030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG05g01030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LE05_CUCSA5.6e-0653.23Uncharacterized protein OS=Cucumis sativus GN=Csa_3G613430 PE=4 SV=1[more]
BLAST of Cp4.1LG05g01030 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G28706.42.3e-0653.49 pfkB-like carbohydrate kinase family protein[more]
BLAST of Cp4.1LG05g01030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203188|gb|KGN58321.1|8.1e-0653.23hypothetical protein Csa_3G613430 [Cucumis sativus][more]
gi|659093068|ref|XP_008447354.1|8.1e-0653.23PREDICTED: ribokinase isoform X2 [Cucumis melo][more]
gi|449468600|ref|XP_004152009.1|8.1e-0653.23PREDICTED: ribokinase [Cucumis sativus][more]
gi|659093065|ref|XP_008447353.1|8.1e-0653.23PREDICTED: ribokinase isoform X1 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016301 kinase activity
molecular_function GO:0016773 phosphotransferase activity, alcohol group as acceptor
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g01030.1Cp4.1LG05g01030.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g01030CsaV3_3G028560Cucumber (Chinese Long) v3cpecucB0893
Cp4.1LG05g01030Bhi05G000099Wax gourdcpewgoB0936
Cp4.1LG05g01030Carg16913Silver-seed gourdcarcpeB1062
Cp4.1LG05g01030Carg08928Silver-seed gourdcarcpeB1099
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g01030Cucumber (Chinese Long) v3cpecucB0889
Cp4.1LG05g01030Cucumber (Chinese Long) v3cpecucB0901
Cp4.1LG05g01030Wax gourdcpewgoB0923
Cp4.1LG05g01030Cucurbita pepo (Zucchini)cpecpeB189
Cp4.1LG05g01030Cucurbita pepo (Zucchini)cpecpeB273
Cp4.1LG05g01030Cucurbita pepo (Zucchini)cpecpeB340
Cp4.1LG05g01030Cucurbita pepo (Zucchini)cpecpeB478
Cp4.1LG05g01030Cucurbita pepo (Zucchini)cpecpeB507
Cp4.1LG05g01030Cucumber (Gy14) v1cgycpeB0381
Cp4.1LG05g01030Cucumber (Gy14) v1cgycpeB0683
Cp4.1LG05g01030Cucurbita maxima (Rimu)cmacpeB290
Cp4.1LG05g01030Cucurbita maxima (Rimu)cmacpeB407
Cp4.1LG05g01030Cucurbita maxima (Rimu)cmacpeB543
Cp4.1LG05g01030Cucurbita maxima (Rimu)cmacpeB647
Cp4.1LG05g01030Cucurbita maxima (Rimu)cmacpeB843
Cp4.1LG05g01030Cucurbita maxima (Rimu)cmacpeB930
Cp4.1LG05g01030Cucurbita moschata (Rifu)cmocpeB252
Cp4.1LG05g01030Cucurbita moschata (Rifu)cmocpeB369
Cp4.1LG05g01030Cucurbita moschata (Rifu)cmocpeB498
Cp4.1LG05g01030Cucurbita moschata (Rifu)cmocpeB596
Cp4.1LG05g01030Cucurbita moschata (Rifu)cmocpeB791
Cp4.1LG05g01030Cucurbita moschata (Rifu)cmocpeB865
Cp4.1LG05g01030Wild cucumber (PI 183967)cpecpiB718
Cp4.1LG05g01030Wild cucumber (PI 183967)cpecpiB726
Cp4.1LG05g01030Cucumber (Chinese Long) v2cpecuB715
Cp4.1LG05g01030Cucumber (Chinese Long) v2cpecuB716
Cp4.1LG05g01030Cucumber (Chinese Long) v2cpecuB724
Cp4.1LG05g01030Bottle gourd (USVL1VR-Ls)cpelsiB584
Cp4.1LG05g01030Bottle gourd (USVL1VR-Ls)cpelsiB616
Cp4.1LG05g01030Bottle gourd (USVL1VR-Ls)cpelsiB617
Cp4.1LG05g01030Watermelon (Charleston Gray)cpewcgB679
Cp4.1LG05g01030Watermelon (Charleston Gray)cpewcgB683
Cp4.1LG05g01030Watermelon (97103) v1cpewmB700
Cp4.1LG05g01030Watermelon (97103) v1cpewmB706
Cp4.1LG05g01030Watermelon (97103) v1cpewmB752
Cp4.1LG05g01030Melon (DHL92) v3.5.1cpemeB690
Cp4.1LG05g01030Melon (DHL92) v3.5.1cpemeB702
Cp4.1LG05g01030Cucumber (Gy14) v2cgybcpeB249
Cp4.1LG05g01030Cucumber (Gy14) v2cgybcpeB424
Cp4.1LG05g01030Cucumber (Gy14) v2cgybcpeB432
Cp4.1LG05g01030Melon (DHL92) v3.6.1cpemedB822
Cp4.1LG05g01030Melon (DHL92) v3.6.1cpemedB825
Cp4.1LG05g01030Melon (DHL92) v3.6.1cpemedB834
Cp4.1LG05g01030Silver-seed gourdcarcpeB0328
Cp4.1LG05g01030Silver-seed gourdcarcpeB0335
Cp4.1LG05g01030Silver-seed gourdcarcpeB1332
Cp4.1LG05g01030Silver-seed gourdcarcpeB1506