Cp4.1LG04g10110 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g10110
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAuxin-responsive protein
LocationCp4.1LG04 : 9651163 .. 9651648 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTATACCCTTAGAACATGATTACATAGGCTTAACAGACTCTGTTCCTTCCCTGGAAACCTCTGAAATGTCCTCCGACACACGCAACAATCCTGGGTTGAACCTTAAGGCCACTGAGCTCAGGCTGGGCCTGCCTGGGTCCGACTCACCGCTCAGGGATGATGGCCTCGACGACACTAATGGATACCCTCACAAGACCTCTGTTTCCGGGGCCAAGAGGGGTTTCTCTGTAGCCATTGATAGAGCTTCTTCCAAGTGGGTTCTGCCTGCCTCTGCCGGATCTGAACCTGATTCCACCAAAACTGGGGGCTTGTTTTCTCCCAGAGTCGTTACTGAGAATAAGACTCAACCACCTGCTTCGCCTGTTTCTGGTGCTAAAGATGGTATGTCTACGTTGCCAAAGCCACTGCTCGAGGAAAAGCCGCAGCTTTCTCCCCCTGCAGCCAAGTATGCCTTCTTCCATTTCTTTTTCCCTCCCCACTAA

mRNA sequence

ATGTCTATACCCTTAGAACATGATTACATAGGCTTAACAGACTCTGTTCCTTCCCTGGAAACCTCTGAAATGTCCTCCGACACACGCAACAATCCTGGGTTGAACCTTAAGGCCACTGAGCTCAGGCTGGGCCTGCCTGGGTCCGACTCACCGCTCAGGGATGATGGCCTCGACGACACTAATGGATACCCTCACAAGACCTCTGTTTCCGGGGCCAAGAGGGGTTTCTCTGTAGCCATTGATAGAGCTTCTTCCAAGTGGGTTCTGCCTGCCTCTGCCGGATCTGAACCTGATTCCACCAAAACTGGGGGCTTGTTTTCTCCCAGAGTCGTTACTGAGAATAAGACTCAACCACCTGCTTCGCCTGTTTCTGGTGCTAAAGATGGTATGTCTACGTTGCCAAAGCCACTGCTCGAGGAAAAGCCGCAGCTTTCTCCCCCTGCAGCCAAGTATGCCTTCTTCCATTTCTTTTTCCCTCCCCACTAA

Coding sequence (CDS)

ATGTCTATACCCTTAGAACATGATTACATAGGCTTAACAGACTCTGTTCCTTCCCTGGAAACCTCTGAAATGTCCTCCGACACACGCAACAATCCTGGGTTGAACCTTAAGGCCACTGAGCTCAGGCTGGGCCTGCCTGGGTCCGACTCACCGCTCAGGGATGATGGCCTCGACGACACTAATGGATACCCTCACAAGACCTCTGTTTCCGGGGCCAAGAGGGGTTTCTCTGTAGCCATTGATAGAGCTTCTTCCAAGTGGGTTCTGCCTGCCTCTGCCGGATCTGAACCTGATTCCACCAAAACTGGGGGCTTGTTTTCTCCCAGAGTCGTTACTGAGAATAAGACTCAACCACCTGCTTCGCCTGTTTCTGGTGCTAAAGATGGTATGTCTACGTTGCCAAAGCCACTGCTCGAGGAAAAGCCGCAGCTTTCTCCCCCTGCAGCCAAGTATGCCTTCTTCCATTTCTTTTTCCCTCCCCACTAA

Protein sequence

MSIPLEHDYIGLTDSVPSLETSEMSSDTRNNPGLNLKATELRLGLPGSDSPLRDDGLDDTNGYPHKTSVSGAKRGFSVAIDRASSKWVLPASAGSEPDSTKTGGLFSPRVVTENKTQPPASPVSGAKDGMSTLPKPLLEEKPQLSPPAAKYAFFHFFFPPH
Homology
[Close]
BLAST of Cp4.1LG04g10110 vs. Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.4e-14
Identity = 68/159 (42.77%), Postives = 87/159 (54.72%), Query Frame = 1 

Query: 1   MSIPLEHDYIGLTDSVPSLETSEMSSDTR---NNPGLNLKATELRLGLPGSDSPLRDDGL 60
           +S+  EHDYIGL++  P++E + MS  T+   NN GLN KATELRLGLPGS+SP R   +
Sbjct: 3   VSVAAEHDYIGLSE-FPTMEATTMSDKTKTRDNNNGLNFKATELRLGLPGSESPER---V 62

Query: 61  DDTNGYPHKTS--VSGAKRGFSVAIDRASSKWVLPASAGSEPDSTKTGGLFSPRVVTENK 120
           D      +K+S  VSGAKR FS AI+  S+KWV   S GS   +   G    PR      
Sbjct: 63  DSRFLALNKSSCPVSGAKRVFSDAIN-DSNKWVF--SPGSTTATGDVGSGSGPR------ 122

Query: 121 TQPPASPVSGAKDGMSTL----PKPLLEEKPQLSPPAAK 151
                   S  KDG ST       P+ E+K   + PA+K
Sbjct: 123 -------TSVVKDGKSTTFTKPAVPVKEKKSSATAPASK 141

[Close]
BLAST of Cp4.1LG04g10110 vs. Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07
Identity = 48/150 (32.00%), Postives = 68/150 (45.33%), Query Frame = 1 

Query: 6   EHDYIGLTD--SVPSLETSEMSSDTRNNPGLNLKATELRLGLPGSDSPLRDDGL------ 65
           EH+Y+GL+D  SV S   S ++ D +    ++LKATEL LGLPGS SP RD  L      
Sbjct: 33  EHNYLGLSDCSSVGSSTLSPLAEDDKAT--ISLKATELTLGLPGSQSPARDTELNLLSPA 92

Query: 66  --------------DDTNGYPHKTSVSGAKRGFSVAIDR---------ASSKWVLPASAG 122
                         D+      K + SG KRGFS  +D+             W+ P +A 
Sbjct: 93  KLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAKSSVYTEKNWMFPEAAA 152

[Close]
BLAST of Cp4.1LG04g10110 vs. Swiss-Prot
Match: IAA17_ORYSJ (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.9e-06
Identity = 43/95 (45.26%), Postives = 50/95 (52.63%), Query Frame = 1 

Query: 1  MSIPLEHDYIGLTDSVPSLETSEMSSDTRNNPGLNLKATELRLGLPGSDSPLRDDGLDDT 60
          MS PLE DYIGL+  VP+   +   +D        LK TELRLGLPGS SP R       
Sbjct: 1  MSPPLELDYIGLSPPVPAAADAAADND--------LKGTELRLGLPGSHSPDRSPPAATL 60

Query: 61 NGYPHKTSVSGAKRGFSVAIDRASSKWVLPASAGS 96
          +  P   +  GAKRGFS   D A     LPASA +
Sbjct: 61 DLLP---AAKGAKRGFS---DEARP---LPASAAA 78

[Close]
BLAST of Cp4.1LG04g10110 vs. TrEMBL
Match: A0A0A0LT68_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_1G207820 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.3e-59
Identity = 121/150 (80.67%), Postives = 131/150 (87.33%), Query Frame = 1 

Query: 1   MSIPLEHDYIGLTDSVPSLETSEMSSDTRNNPGLNLKATELRLGLPGSDSPLRDDGLDDT 60
           MSIPLEHDYIGLT+SVPSLE SE SSD RN+ GLNLKATELRLGLPGS+SP RDDG +D 
Sbjct: 1   MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFEDK 60

Query: 61  NGYPHKTSVSGAKRGFSVAIDRASSKWVLPASAGSEPDSTKTGGLFSPRVVTENKTQPPA 120
           NG+ HK+SVSGAKRGFS+AIDRAS+KWVLPASAGSE DS+  GGLFSPR V ENKTQPPA
Sbjct: 61  NGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120

Query: 121 SPVSGAKDGMSTLPKPLLEEKPQLSPPAAK 151
           S VSG KDG+S   KPL EEKPQLSPPAAK
Sbjct: 121 SAVSGVKDGISPSAKPLHEEKPQLSPPAAK 150

[Close]
BLAST of Cp4.1LG04g10110 vs. TrEMBL
Match: F6HH09_VITVI (Auxin-responsive protein OS=Vitis vinifera GN=VIT_11s0016g03540 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-28
Identity = 87/165 (52.73%), Postives = 105/165 (63.64%), Query Frame = 1 

Query: 1   MSIPLEHDYIGLTDSVPSLETSE-MSSDTRNNPGLNLKATELRLGLPGSDSPLRDDGLD- 60
           MS  LEHDYIGL++ V S+E+SE +++D+  + GLNLKATELRLGLPGS+SP R D +  
Sbjct: 1   MSKQLEHDYIGLSE-VSSMESSEKLTTDSEGSNGLNLKATELRLGLPGSESPERIDSVGG 60

Query: 61  -DTNGYP---HKTSVSGAKRGFSVAIDRASSKWVLPASAGSEPDSTKTGGLFSPR----- 120
            D NGYP    K  VSGAKRGFS AID  S KWV   S GSE D TK GGLFSPR     
Sbjct: 61  LDKNGYPLGVLKNLVSGAKRGFSDAIDGGSGKWVFSGSGGSETDLTKGGGLFSPRGGNGG 120

Query: 121 ----VVTENKTQPPASPVSGAKDGMSTLPKPLLEEKPQLSPPAAK 151
                 +E+  Q  +       D +   PKP+ E+KPQ+S PAAK
Sbjct: 121 GKHLGGSESNNQHSSLGTPVKNDVVPQSPKPMHEKKPQISAPAAK 164

[Close]
BLAST of Cp4.1LG04g10110 vs. TrEMBL
Match: M5WEB1_PRUPE (Auxin-responsive protein OS=Prunus persica GN=PRUPE_ppa009134mg PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.7e-28
Identity = 81/157 (51.59%), Postives = 97/157 (61.78%), Query Frame = 1 

Query: 1   MSIPLEHDYIGLTDSVPSLETSEMSSDTRNNPGLNLKATELRLGLPGSDSPLRDDGLDDT 60
           MS+ LEHDYIGL++S  S+E+S+ S++      LNLKATELRLGLPGS+SP RD G    
Sbjct: 1   MSMSLEHDYIGLSESASSMESSDKSAERDRGTALNLKATELRLGLPGSESPDRDCG---- 60

Query: 61  NGYPHKTSVSGAKRGFSVAIDRASSKWVLPASAGSEPDSTKTGGLFSPRVV--------T 120
                   VSGAKRGFS AID AS KW+   S GSE D  K G L SPR V        +
Sbjct: 61  ------GLVSGAKRGFSDAIDGASGKWIFSGSGGSEVDMGKGGNLLSPRGVNGGKALAGS 120

Query: 121 ENKTQPPASPVSGAKDGMSTLPKPLLEEKPQLSPPAA 150
           E+  QP +  VS  KDG    PKPL E+KPQ+S  A+
Sbjct: 121 ESNNQPTSLAVSAVKDGGQQSPKPLHEKKPQVSASAS 147

[Close]
BLAST of Cp4.1LG04g10110 vs. TrEMBL
Match: V7C7G7_PHAVU (Auxin-induced protein OS=Phaseolus vulgaris GN=PHAVU_004G166400g PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.0e-27
Identity = 81/155 (52.26%), Postives = 101/155 (65.16%), Query Frame = 1 

Query: 1   MSIPLEHDYIGLTDSVPSLETSEMSSDTRNNPGLNLKATELRLGLPGSDSPLRDDGLDDT 60
           MS+PLE  Y+GL++ VP++E S+  S  R + GLNLKATELRLGLPGS+SP RD G+++ 
Sbjct: 1   MSVPLEQGYVGLSE-VPAMEGSDKFSQ-RTSGGLNLKATELRLGLPGSESPERDGGVEER 60

Query: 61  NGYP---HKTSVSGAKRGFSVAIDRASSKWVLPASAGSEPDSTKTGGLFSPRVV--TENK 120
           N +P    K  VSGAKRGFS  ID  S KW+L  + GSE    K  GLFSPR V  +  K
Sbjct: 61  NVHPLGMVKNLVSGAKRGFSDTIDGGSGKWLLSGNGGSEVGLGKDCGLFSPRGVGASAGK 120

Query: 121 TQPPASPVSGAKDGMSTLPKPLLEEKPQLSPPAAK 151
            +      S  KD +   PKPL E+KPQ+S PAAK
Sbjct: 121 AESTNQQTSVVKDKVPLPPKPLNEKKPQISAPAAK 153

[Close]
BLAST of Cp4.1LG04g10110 vs. TrEMBL
Match: A0A0L9VGN3_PHAAN (Auxin-induced protein OS=Phaseolus angularis GN=LR48_Vigan10g012200 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-27
Identity = 79/155 (50.97%), Postives = 101/155 (65.16%), Query Frame = 1 

Query: 1   MSIPLEHDYIGLTDSVPSLETSEMSSDTRNNPGLNLKATELRLGLPGSDSPLRDDGLDDT 60
           MS+PLE  Y+GL++ V ++E+S+  S    + GLNLKATELRLGLPGS+SP RD G+++ 
Sbjct: 1   MSVPLEQGYVGLSE-VSAMESSDKFS---TSGGLNLKATELRLGLPGSESPERDGGVEEK 60

Query: 61  NGYP---HKTSVSGAKRGFSVAIDRASSKWVLPASAGSEPDSTKTGGLFSPRVVTEN--K 120
           NG+P    K  VSGAKRGFS  ID  S KW+L  + GSE D  K  GLFSPR +     K
Sbjct: 61  NGHPLGMVKNLVSGAKRGFSDTIDGGSGKWLLSGNGGSEVDLGKDCGLFSPRGIGAGAAK 120

Query: 121 TQPPASPVSGAKDGMSTLPKPLLEEKPQLSPPAAK 151
            +     +S  KD +   PKPL E+KPQ+S P AK
Sbjct: 121 AESANQQISVVKDKVPLPPKPLNEKKPQISAPTAK 151

[Close]
BLAST of Cp4.1LG04g10110 vs. TAIR10
Match: AT4G29080.1 (AT4G29080.1 phytochrome-associated protein 2)

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-15
Identity = 68/159 (42.77%), Postives = 87/159 (54.72%), Query Frame = 1 

Query: 1   MSIPLEHDYIGLTDSVPSLETSEMSSDTR---NNPGLNLKATELRLGLPGSDSPLRDDGL 60
           +S+  EHDYIGL++  P++E + MS  T+   NN GLN KATELRLGLPGS+SP R   +
Sbjct: 3   VSVAAEHDYIGLSE-FPTMEATTMSDKTKTRDNNNGLNFKATELRLGLPGSESPER---V 62

Query: 61  DDTNGYPHKTS--VSGAKRGFSVAIDRASSKWVLPASAGSEPDSTKTGGLFSPRVVTENK 120
           D      +K+S  VSGAKR FS AI+  S+KWV   S GS   +   G    PR      
Sbjct: 63  DSRFLALNKSSCPVSGAKRVFSDAIN-DSNKWVF--SPGSTTATGDVGSGSGPR------ 122

Query: 121 TQPPASPVSGAKDGMSTL----PKPLLEEKPQLSPPAAK 151
                   S  KDG ST       P+ E+K   + PA+K
Sbjct: 123 -------TSVVKDGKSTTFTKPAVPVKEKKSSATAPASK 141

[Close]
BLAST of Cp4.1LG04g10110 vs. TAIR10
Match: AT5G65670.1 (AT5G65670.1 indole-3-acetic acid inducible 9)

HSP 1 Score: 57.8 bits (138), Expect = 7.3e-09
Identity = 48/150 (32.00%), Postives = 68/150 (45.33%), Query Frame = 1 

Query: 6   EHDYIGLTD--SVPSLETSEMSSDTRNNPGLNLKATELRLGLPGSDSPLRDDGL------ 65
           EH+Y+GL+D  SV S   S ++ D +    ++LKATEL LGLPGS SP RD  L      
Sbjct: 33  EHNYLGLSDCSSVGSSTLSPLAEDDKAT--ISLKATELTLGLPGSQSPARDTELNLLSPA 92

Query: 66  --------------DDTNGYPHKTSVSGAKRGFSVAIDR---------ASSKWVLPASAG 122
                         D+      K + SG KRGFS  +D+             W+ P +A 
Sbjct: 93  KLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAKSSVYTEKNWMFPEAAA 152

[Close]
BLAST of Cp4.1LG04g10110 vs. NCBI nr
Match: gi|449465681|ref|XP_004150556.1| (PREDICTED: auxin-responsive protein IAA27 [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 3.2e-59
Identity = 121/150 (80.67%), Postives = 131/150 (87.33%), Query Frame = 1 

Query: 1   MSIPLEHDYIGLTDSVPSLETSEMSSDTRNNPGLNLKATELRLGLPGSDSPLRDDGLDDT 60
           MSIPLEHDYIGLT+SVPSLE SE SSD RN+ GLNLKATELRLGLPGS+SP RDDG +D 
Sbjct: 1   MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFEDK 60

Query: 61  NGYPHKTSVSGAKRGFSVAIDRASSKWVLPASAGSEPDSTKTGGLFSPRVVTENKTQPPA 120
           NG+ HK+SVSGAKRGFS+AIDRAS+KWVLPASAGSE DS+  GGLFSPR V ENKTQPPA
Sbjct: 61  NGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120

Query: 121 SPVSGAKDGMSTLPKPLLEEKPQLSPPAAK 151
           S VSG KDG+S   KPL EEKPQLSPPAAK
Sbjct: 121 SAVSGVKDGISPSAKPLHEEKPQLSPPAAK 150

[Close]
BLAST of Cp4.1LG04g10110 vs. NCBI nr
Match: gi|659125559|ref|XP_008462746.1| (PREDICTED: auxin-responsive protein IAA27 [Cucumis melo])

HSP 1 Score: 232.3 bits (591), Expect = 6.1e-58
Identity = 120/151 (79.47%), Postives = 131/151 (86.75%), Query Frame = 1 

Query: 1   MSIPLEHDYIGLTDSVPSLETSEMSSDTRNNPGLNLKATELRLGLPGSDSPLRDDGLDDT 60
           MSIPLEHDYIGLT+SVPSLE+SE SSD RNN GLNLKATELRLGLPGS+SP RDDG +D 
Sbjct: 1   MSIPLEHDYIGLTESVPSLESSEKSSDKRNNAGLNLKATELRLGLPGSESPGRDDGFEDN 60

Query: 61  NGYPHKTSVSGAKRGFSVAIDRASSKWVLPASAGSEPDSTKTGGLFSPRVVTENKTQPPA 120
           NG+ HK+ VSGAKRGFS+AIDRAS+KWVLPASAGSE DS+  GGLFSPR V ENKTQPPA
Sbjct: 61  NGFLHKSPVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120

Query: 121 SPVSGAKDGMSTLPKPLL-EEKPQLSPPAAK 151
           S V G KDG+S   KP+L EEKPQLSPPAAK
Sbjct: 121 SAVPGVKDGISPSAKPVLNEEKPQLSPPAAK 151

[Close]
BLAST of Cp4.1LG04g10110 vs. NCBI nr
Match: gi|1009160678|ref|XP_015898478.1| (PREDICTED: auxin-responsive protein IAA27 [Ziziphus jujuba])

HSP 1 Score: 151.8 bits (382), Expect = 1.1e-33
Identity = 92/166 (55.42%), Postives = 112/166 (67.47%), Query Frame = 1 

Query: 1   MSIPLEHDYIGLTDSVPSLETSEMSSDTRNNPG--LNLKATELRLGLPGSDSPLRDD--- 60
           MS+PLEHDYIG ++SVPS+E S  SS+ R++ G  LNLKATELRLGLPGS+SP RD+   
Sbjct: 1   MSMPLEHDYIGFSESVPSMENSGRSSE-RSSTGSRLNLKATELRLGLPGSESPERDEDDC 60

Query: 61  GLDDTNGYPH---KTSVSGAKRGFSVAIDRASSKWVLPASAGSEPDSTKTGGLFSPRVVT 120
           G++D NG+     K  VSGAKRGFS AID A+ KWV   S GSE +  K+G LFSPR + 
Sbjct: 61  GVEDKNGFQLGVLKCLVSGAKRGFSDAIDGAAGKWVYSGSGGSETELGKSGNLFSPRAIN 120

Query: 121 ENKT--------QPPASPVSGAKDGMSTLPKPLLEEKPQLSPPAAK 151
             KT        QP    VS  +DG+   PKPL E+KPQ+S PAAK
Sbjct: 121 AGKTLAGSECNNQPKGMAVSTVEDGIPQSPKPLHEKKPQVSAPAAK 165

[Close]
BLAST of Cp4.1LG04g10110 vs. NCBI nr
Match: gi|1009160345|ref|XP_015898299.1| (PREDICTED: auxin-responsive protein IAA27-like [Ziziphus jujuba])

HSP 1 Score: 149.8 bits (377), Expect = 4.0e-33
Identity = 91/166 (54.82%), Postives = 112/166 (67.47%), Query Frame = 1 

Query: 1   MSIPLEHDYIGLTDSVPSLETSEMSSDTRNNPG--LNLKATELRLGLPGSDSPLRDD--- 60
           MS+PLEHDYIG ++SVPS+E S  SS+ R++ G  LNLKATELRLGLPGS+SP RD+   
Sbjct: 1   MSMPLEHDYIGFSESVPSMEISGRSSE-RSSTGSRLNLKATELRLGLPGSESPERDEDDC 60

Query: 61  GLDDTNGYPH---KTSVSGAKRGFSVAIDRASSKWVLPASAGSEPDSTKTGGLFSPRVVT 120
           G++D NG+     K  VSGAKRGFS AID A+ KWV   S GSE +  K+G LFSPR + 
Sbjct: 61  GVEDKNGFQLGVLKCLVSGAKRGFSDAIDGAAGKWVYSGSGGSETELGKSGNLFSPRAIN 120

Query: 121 ENKT--------QPPASPVSGAKDGMSTLPKPLLEEKPQLSPPAAK 151
             KT        QP    V+  +DG+   PKPL E+KPQ+S PAAK
Sbjct: 121 AGKTLAGSECNNQPKGVAVATVEDGIPQSPKPLHEKKPQVSAPAAK 165

[Close]
BLAST of Cp4.1LG04g10110 vs. NCBI nr
Match: gi|645274920|ref|XP_008242568.1| (PREDICTED: auxin-responsive protein IAA27 [Prunus mume])

HSP 1 Score: 142.9 bits (359), Expect = 4.9e-31
Identity = 86/164 (52.44%), Postives = 104/164 (63.41%), Query Frame = 1 

Query: 1   MSIPLEHDYIGLTDSVPSLETSEMSSDTRNNPGLNLKATELRLGLPGSDSPLRDDG---L 60
           MS+ LEHDYIGL++S  S+E+S+ S++      LNLKATELRLGLPGS+SP RD G   +
Sbjct: 1   MSMSLEHDYIGLSESASSMESSDKSAERDRGTALNLKATELRLGLPGSESPERDGGGGLV 60

Query: 61  DDTNGYP---HKTSVSGAKRGFSVAIDRASSKWVLPASAGSEPDSTKTGGLFSPRVV--- 120
           +D  GY     K  VSGAKRGFS AID AS KW+   S GSE D  K G L SPR V   
Sbjct: 61  EDKTGYSVCVVKGLVSGAKRGFSDAIDGASGKWIFSGSGGSEVDMGKGGNLLSPRGVNGG 120

Query: 121 -----TENKTQPPASPVSGAKDGMSTLPKPLLEEKPQLSPPAAK 151
                +++  QP +  VS  KDG    PKPL E+KPQ+S  AAK
Sbjct: 121 KALAGSDSNNQPTSLAVSAVKDGAQQSPKPLHEKKPQVSASAAK 164

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g10110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IAA27_ARATH2.4e-1442.77Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=1 SV=1[more]
IAA9_ARATH1.3e-0732.00Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1[more]
IAA17_ORYSJ1.9e-0645.26Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=... [more]
BLAST of Cp4.1LG04g10110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LT68_CUCSA2.3e-5980.67Auxin-responsive protein OS=Cucumis sativus GN=Csa_1G207820 PE=3 SV=1[more]
F6HH09_VITVI1.2e-2852.73Auxin-responsive protein OS=Vitis vinifera GN=VIT_11s0016g03540 PE=3 SV=1[more]
M5WEB1_PRUPE2.7e-2851.59Auxin-responsive protein OS=Prunus persica GN=PRUPE_ppa009134mg PE=3 SV=1[more]
V7C7G7_PHAVU1.0e-2752.26Auxin-induced protein OS=Phaseolus vulgaris GN=PHAVU_004G166400g PE=3 SV=1[more]
A0A0L9VGN3_PHAAN1.3e-2750.97Auxin-induced protein OS=Phaseolus angularis GN=LR48_Vigan10g012200 PE=3 SV=1[more]
BLAST of Cp4.1LG04g10110 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G29080.11.4e-1542.77 phytochrome-associated protein 2[more]
AT5G65670.17.3e-0932.00 indole-3-acetic acid inducible 9[more]
BLAST of Cp4.1LG04g10110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449465681|ref|XP_004150556.1|3.2e-5980.67PREDICTED: auxin-responsive protein IAA27 [Cucumis sativus][more]
gi|659125559|ref|XP_008462746.1|6.1e-5879.47PREDICTED: auxin-responsive protein IAA27 [Cucumis melo][more]
gi|1009160678|ref|XP_015898478.1|1.1e-3355.42PREDICTED: auxin-responsive protein IAA27 [Ziziphus jujuba][more]
gi|1009160345|ref|XP_015898299.1|4.0e-3354.82PREDICTED: auxin-responsive protein IAA27-like [Ziziphus jujuba][more]
gi|645274920|ref|XP_008242568.1|4.9e-3152.44PREDICTED: auxin-responsive protein IAA27 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003311AUX_IAA
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g10110.1Cp4.1LG04g10110.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003311AUX/IAA proteinPANTHERPTHR31734FAMILY NOT NAMEDcoord: 7..82
score: 5.0E-27coord: 113..150
score: 5.0
NoneNo IPR availablePANTHERPTHR31734:SF39SUBFAMILY NOT NAMEDcoord: 113..150
score: 5.0E-27coord: 7..82
score: 5.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g10110CmaCh10G006390Cucurbita maxima (Rimu)cmacpeB093
Cp4.1LG04g10110CmaCh11G006240Cucurbita maxima (Rimu)cmacpeB153
Cp4.1LG04g10110CmoCh11G006340Cucurbita moschata (Rifu)cmocpeB129
Cp4.1LG04g10110CmoCh10G006720Cucurbita moschata (Rifu)cmocpeB069
Cp4.1LG04g10110Cla004102Watermelon (97103) v1cpewmB680
Cp4.1LG04g10110MELO3C024699Melon (DHL92) v3.5.1cpemeB623
Cp4.1LG04g10110ClCG06G008840Watermelon (Charleston Gray)cpewcgB617
Cp4.1LG04g10110Lsi06G008470Bottle gourd (USVL1VR-Ls)cpelsiB557
Cp4.1LG04g10110MELO3C024699.2Melon (DHL92) v3.6.1cpemedB737
Cp4.1LG04g10110CsaV3_7G033480Cucumber (Chinese Long) v3cpecucB0873
Cp4.1LG04g10110Bhi02G000976Wax gourdcpewgoB0886
Cp4.1LG04g10110Bhi09G000149Wax gourdcpewgoB0880
Cp4.1LG04g10110CsGy5G013000Cucumber (Gy14) v2cgybcpeB680
Cp4.1LG04g10110Carg09511Silver-seed gourdcarcpeB1431
Cp4.1LG04g10110Carg12216Silver-seed gourdcarcpeB0054
Cp4.1LG04g10110Carg09838Silver-seed gourdcarcpeB0186
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG04g10110Cp4.1LG18g04280Cucurbita pepo (Zucchini)cpecpeB360
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g10110Wax gourdcpewgoB0830
Cp4.1LG04g10110Wax gourdcpewgoB0840
Cp4.1LG04g10110Wax gourdcpewgoB0896
Cp4.1LG04g10110Cucurbita pepo (Zucchini)cpecpeB132
Cp4.1LG04g10110Cucurbita pepo (Zucchini)cpecpeB187
Cp4.1LG04g10110Cucurbita pepo (Zucchini)cpecpeB453
Cp4.1LG04g10110Cucurbita pepo (Zucchini)cpecpeB476
Cp4.1LG04g10110Cucurbita pepo (Zucchini)cpecpeB502
Cp4.1LG04g10110Cucumber (Gy14) v1cgycpeB0278
Cp4.1LG04g10110Cucurbita maxima (Rimu)cmacpeB196
Cp4.1LG04g10110Cucurbita maxima (Rimu)cmacpeB496
Cp4.1LG04g10110Cucurbita maxima (Rimu)cmacpeB784
Cp4.1LG04g10110Cucurbita moschata (Rifu)cmocpeB170
Cp4.1LG04g10110Cucurbita moschata (Rifu)cmocpeB455
Cp4.1LG04g10110Cucurbita moschata (Rifu)cmocpeB737
Cp4.1LG04g10110Wild cucumber (PI 183967)cpecpiB665
Cp4.1LG04g10110Cucumber (Chinese Long) v2cpecuB662
Cp4.1LG04g10110Bottle gourd (USVL1VR-Ls)cpelsiB527
Cp4.1LG04g10110Bottle gourd (USVL1VR-Ls)cpelsiB574
Cp4.1LG04g10110Watermelon (Charleston Gray)cpewcgB586
Cp4.1LG04g10110Watermelon (Charleston Gray)cpewcgB623
Cp4.1LG04g10110Watermelon (97103) v1cpewmB650
Cp4.1LG04g10110Watermelon (97103) v1cpewmB676
Cp4.1LG04g10110Melon (DHL92) v3.5.1cpemeB621
Cp4.1LG04g10110Melon (DHL92) v3.5.1cpemeB633
Cp4.1LG04g10110Cucumber (Gy14) v2cgybcpeB124
Cp4.1LG04g10110Cucumber (Gy14) v2cgybcpeB232
Cp4.1LG04g10110Cucumber (Gy14) v2cgybcpeB416
Cp4.1LG04g10110Melon (DHL92) v3.6.1cpemedB736
Cp4.1LG04g10110Melon (DHL92) v3.6.1cpemedB754
Cp4.1LG04g10110Melon (DHL92) v3.6.1cpemedB757
Cp4.1LG04g10110Silver-seed gourdcarcpeB0290
Cp4.1LG04g10110Silver-seed gourdcarcpeB0814
Cp4.1LG04g10110Silver-seed gourdcarcpeB1055
Cp4.1LG04g10110Silver-seed gourdcarcpeB1247
Cp4.1LG04g10110Cucumber (Chinese Long) v3cpecucB0819
Cp4.1LG04g10110Cucumber (Chinese Long) v3cpecucB0826
Cp4.1LG04g10110Cucumber (Chinese Long) v3cpecucB0839