Cp4.1LG04g08460 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g08460
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Eukaryotic translation initiation factor 3 subunit A
Location	Cp4.1LG04 : 2879879 .. 2887607 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTGGTTCTTCATGTGTGGCTCAGGTCATTTGACGTTGCATGCTGTCCTTGAGTGAGCTAAATATTTGATCGACTCATGGCTTCTTTTGTCAAGCCAGAGAATGCTTTAAAACGAGCTGAAGGTGAACGGACATAAAATTCTCTTTTGGGTTTTCTGTAGATTGCATTGTTTTTTAAAGTATACCATGACTTTTAGGGTGTACTTCGTTTTTGCAGTATGTATGACCCTTTTGATGAATTCTGAATGCTCAATGAATTTTTTTCATCCGTTGTTTGTTGGAAAGTTGGTTCGGTGTACATGTTCTGAGTGACATATACAATATATGTATTATTCATGTATGAACGCCTGTCGATTAAGTAAATTAAATTTTGGAAGTTCCCTCTTGAAAATTGTAATGTGGTAATCTTCATGCCATACCGTTATTACTTTTGAGTTTGATAACTTGTGGAAGTTGTTTCGTTATAGGCCTATGATGTATGAACACTATAATTTAGACAACATGTTTATGGTTTGCATTATGTAACATGTAATTGGTTCTTCCATTTTATAACCATGTAATTTGGTTCTTCAATTGTTTTTGTGTGTCTTATCTATTCAGTTCCTTTTCTTATATTATAGTGTGTAAAAAAATTCTAGATATACAAAATGTCATTTTGCCTTTGTTGTGAATTGTGCTTCTTGCCCCTGAGTTTCCTGTATATGTTTCTAGTCTACAACTGACGTTGTATTCACCCTATTTCGAAATGAATGCTGTGTTTACTGGTTTTTTGGGAAATGAAAGGTCGCTAGCATTAATATTTTTTCTCCTTACATTTATCCAGAGCTGATAAATGTTGGCCAGAAGCAGGATGCCTTGCAAGCTCTTCATGATCTTATAACTTCAAAGAAATATAGAGCATGGCAGAAACCTCTTGAGAGGATTATGTTTAAGTATGTTGAGCTTTGTGTGGACATGAGGAAAGGAAGGTTTGCAAAGGATGGTTTGATTCAGTACCGTATTGTTTGCCAGCAAGTCAATGTTACTTCTTTAGAGGAAGTAATCAAGCACTTTATGCATCTTTCCACTGAGAAGGCAGAGCAGGCTCGTAGTCAAGCTCAAGCATTAGAAGAAGCTCTTGATGTTGATGACTTGGAAGCTGATAAAAGACCAGAAGATCTGATGCTTAGTTATGTCAGTGGGGAGAAAGGAAAGGACAGATCTGATCGCGAACTTGTTACCCCTTGGTTTAAATTTCTATGGGAGACATATCGAACAGTTCTTGAGATACTAAGGAATAACTCAAAGTTGGAAGCACTTTATGCGGTAGGCCATACCTTAATTGACAGCTATTTGGTGTATGAGTTATTTTTTCAGTTTATATCTACTGATAAATGATAAGGGTGTGGGGATGATTGTTAAAATCTCGTCAAAGTTTAACTTCGCTTGCTAATTGTTCTGATGGTTGGAGGATTTAAGAAAGCTTCTTTGCATCTGTACCTGGGAGATATGTTTAGGTTTTTTTGGAACTATTTTGCCATAAGTATTTGAATTTTTAGCGGTAACATGAAGGCTATGAATTAATTAGTTAATGTTATGAAGATTGAGGAATGGAGTGTTGAACCTTGATGGGCATGTTGGCTTTTCATAGGATTACTTTCACAATTTCATTTTTTTACTTATAATTTTTCAAAGAGGAGGAAACAAGATTTTGTGCCTTACTCAGTTTGGACATTAATTTTATAAGGATCTGATTTTTTTTATTGTCCTTGATGTGTTCTGTGCTCTTTATAGACTGGATGAATCAGGATGGATTTTGTACCAAGATGTAATATTTCTTCTGGCGTTTTTCATTTGTAGATGACAGCCCATCGTGCCTTCCAGTTTTGTAAGCTGTACAAAAGGACAACAGAATTTCGCAGATTATGTGAAATTATCAGAAATCATCTTGCTAATCTCAACAAGTATAGAGACCAAAGAGATCGGCCTGACCTATCTGCTCCAGAGAGCTTGCAGTTGTACCTTGACACAAGATTTGAACAGCTGAAGGTTGCCACGGAGCTTGAACTCTGGCAGGTCTGAATTTTTCCGTTCTTTAATTTTTCTCCCTCATATAGAGGAAGTAATGTCTAGATTCCTACAATTCATATCTTGATTATCTTCTACGAATAATGCAATTCAAATGATTCCTTCTTACCATTATTTGCAGGAAGCTTTTCGTTCTGTGGAAGATATTCATGGTTTGATGTGTATGGTGAAGAAAACACCCAAGCCATCGTTGATGGTGGTTTACTACGTCAAATTAACAGAGATCTTCTGGATATCGGATAGTAATCTTTATCATGCCTATGCATGGCTTAAACTTTTCTCCCTTCAGAAGAGTTTCAACAAAAATCTAAGCCAGAAGGACCTACAGCTGATAGCATCATCTGTTGTGTTAGCCGCTCTTGCAGTGCCCCCCTATGACTCCAAGCATGGTGCATCACATTTAGAACTGGAACATGAGAAAGAGCGAAGTTTGAGGATGGCTAATCTCATAGGGTTCGGTTTAGACTCCAAACTTGAGAGTAGAGATGTGGTAATGCATTTGCTTAATTGGTTTTAACTTATTATTTTTCGCAACCTGCATATTGCCTTACTCTTTTCTGTTTGTGTTTTTTTTTTCCAGCTTTCGAGGGAAAATCTTCTCTCTGAACTGGTATGTTGGACTCGGTTGACTTGGACATTTTTGTTGTCTTTTCCCTTCTGCCCTCCAAATTTATTATACTTCGATTGCTTCACATTCTTTTGAATTGTTAAGCAGAAGATCTTTAATTTCTCTTTCTCACTTTTCCATATTTCTGACAACTTCAAGTATGTAGCCAATAACTTTTGTTCTCTTTTCTTAGTAGATTTGTGCTTTTGTTTAGGTGTCTAAAGGAGTCCTGAGCTGTGCAACTCAGGAAATTAAAGATCTTTATCATCTTTTGGAGCATGAGTTCTTCCCTCTCGATCTTGCATTAAAATTGCAACCGTTGTTCACAAAAATATCTAAGCTTGGAGGTAAGCTTTCATCAGCCTCATCTGTACCCGAATTGCAATTGTCTCAATATGTTCCAGCTCTTGAAAAACTTGCTACCCTGAGGCTACTTCAGCAGGTACTTATATATTTTATATATTATGAACTTCGCCAAGCCATTACTTATATATAAAGAGAAACATTGTTTAATAACATTTAAATTAGAATGTACTGAAGTCTTTATTTATCTATGTTTTTCCAGGTCTCCCATGTATACCAGACTATGAAAATTGAGAGTCTGTCGCAGATGATCCCATTTTTTGATTTTTCTGCCGTGGAGAAAATATTAGTTGATGCAGTTAAACAAAATTTCATCGCCATGAAAGTCGATCATTCAAGGAACATCGTCTTATTTGGCAATTTGGTATTTGAAATTCTTTTCTTTTTTCTCCCTTCTCTGATATATACAAAAAAAAGACGCTGAGATTTGAGCCATGGTTGATAATTTGATTTTACATCATAATGTGACCCAATTGTTTTTTTACTGCTGTTGAATTTTATGCATTAAGCCCTTCTGATTTTGTGTCGGCTTTTTTATTTTTGTAAAGTTAATTTATGTTGAATTTAGAGGAATGACTAACTTTTTCTGTATATTTATTAAGGATTTAGGCAATGGTATTCTTCTCAGTATATAATTAACTGATGTTTATAGCTTAATTTTTTATGAATCAATGTAGGGTATTGAATCAGAAGGGCTTCGGGACCACCTGACTGTGCTTGCTGAGTCCCTAAACAAAGTAAGAGCCATGATCTACCCTCCTGTAAAGAAAACATCAAAAACAGGTGAAATATTGCCTGATTTAGCAGATATTGTTGATAAAGAGCACAAGAGGCTTCTTGCTCGGAAATCAATAATTGAGAAAAGGAAGGAAGAGCAGGAACGACAACTTTTGGAAATGGTACCCTCATTATACTTTGAATTGCCTTATTCATTGTTCTTTTGGAGGTTCATAAATTGTAAAAATTGTGATCAACTGTGTTTAGGAACGTGAGGAGGAATCAAGAAGGTTAAAATTACTAAAGATAACTGAAGAGGCTGAGCAGAAGCGTCTTGCTTTAGAATATGAACAAAGGAAAAGTCAACGGCTTCGTAGGGAAATGGAAGAGCGAGAACTTGAAGAAGCACAGGCATTACTTCAGGAAGCTGAAAAGCGTGTTGGTAAAAAGAAGGGAAGCAGGAAGCCGGTTCTTGATTCCGTGAGTTTTGTTTGTTACTTATTTTCTTATTGTTGATAGATGTATATTCGATAAATAACATGTGAGTATGTCTCCAGGAAAAGTTGACTAAACAAACCTTAATGCAATTGGCCCTTACTGAACAATTAAGGGAGAGGCAGGAAATGGAAAAGAAATTGCAGAAGCTTTCCAAAACTATGGATTATCTAGAAAGAGCAAAAAGAGAAGAGGCAGCAACGTTAATCGAAGCTGCATTTCAGCAACGTTTGCTTGAAGAGAGGACGATTCATGAACGTGATCAGCAGGTCTTTCTTTCTGAACCATTGTTCCATTATATTAAAGAAACTTTGACTATGATTATCTGTATTTGGCTGCAGTTTTCATGTTCCTTTTTTCTTTATTAATTCTCAATGCGTGAAATTGGATTTGTTAGTGCATTTTGGTAATATAGTTAACTACACATGCATATGGTATGACTAAATAATACATAGGCAAATTACGGTAGTTTTATGCATCTAAAAAGGTCGATATATTTTTGTGGCCTTAACTTCTTTTTTCACTTCAGCCTAAATCGAGAAGTGTTGAAGTCCCCAATTAGCTTTTATGCTTCTCATGTTTTTATATTACTTTATTCAACTTCTGTATGTGTCTTGACATTTCCAACCATAGTGATTTAGTAGAAGGGGATAAAGTTAGTCTTATGATAATGCTTCTCTCTTGATCTTTGCTCAATTTGTTCTTTTGAGTACGTTGGTGGAGACATAGAGTAGAGAGTGGCTACGAGGCTTGCCTAGTCTTTTCAACATGTAGTTATGGGTGGGTGTTAACGATTTTGCTGGATTGTAGGTTGATACATGTCATCTCTGGTCCTTTATGCTTGATGATTTTCCAATCAGTGAAGGAAATCTTCAGCACATTGCACTTGTATCTCATATCACTTGTTTGTCAGCAGCAAAGAACTTATGTGACATAGCTTGAATTTGACCTCATAAATGTTGGTATTGTGAGGGTGGAAGAGAAAGTAGCAGAGAACCCACTACTGTCTTCATGGAATCTTCTGTCCAGTTGGACAAAAAGAAATTGCTTCTTTGACCACTCTCGGTTTGATAGAAAAGTGGGCTGGACAACAGTACTATTGCATGTATTGTAACTTTAAAGCCTGTCAGTGCTGCAAGTTTATCAAAGAGGGAGATTCTTCTTATAATGTGAGTAGGAGTTAATGTAGAGAGAGGGTAGTTGCAAATATACTATGGGTGCTGTTTCTTGAGAATTTCTAGCTGGGATTTACCATGATCCTATGTGAACTTTGAAAAGATGAACTGATGCTTTTGCACGTGACTTATTGATCTAGTGAATTCAACATTTTCAAGTATTACTCTTAATGTTTCTGATGGGTAATTTTGCCATGATTTTCCTGCATGTGGCTTCCACAACATACCATTCTTACAATGCCGTGCTTTACGACAAATATTTAACTTATTGTATTGATTACACCTATTCATTTTTTTCTTTGTGCTTTTATTTTGTTTTTGTTATCAGTTTTTTCCTGCTACCATTGATGATATGTTAATACTTAATGGGGTGTTTTAAAGTTTATTTATTATAAAATGGAGTTCCTTTTCTGCTTTTCAGCTGGAGGTCGAGTTAAGCAAGCAGCGCCATGAAGGTGACCTGAAGGAGAAGAACAGATTGGCAAGAATGTTGGAGAGCAAGGTTTGTTTATTTATTATAATTATTTTCATATTTTTTAGTTTAACATGTGGACGTTAGTAACTCGTACATAGAGGGACCCAAACTTCTTGGTAGAGTAGAGACTATATGCCTTAATTAGTATGCTTAGGTGGATAAGGTTAATAGTTTCATATGGCTTTATTTCAATTACTCATAATCTGTCTGCTCTAACTCTTAGAATTCACTATTCAAGTGTACTTCGATTGAAAAATGTGTAGATCATTTCAGGTTTAATTTGTAAGTTCCTAGAACTCTGCTCTAAATTTAGGATGTTTGGTATGTTGGAAGTATACGAGAGCGCATGATTACTTTTTTATCCGATGGTACAGTGCCCATTTCTTTTTTTTTTCTTTTCTTTATTTAATATAATTCTAAACTTCGTTGATGTTGTGAAATGAAACTTGAGCGTATGAATGTTTGCAGAAATTGTTGACTTTTGACACATAGATCAAACTTAACCTTTTAACTTTTGTTGTATAGAAAATTTTCCAAGAAAGAGTTATCAGTCTTCGCCAAGAGGAGTTCAACAAACGTAGAGCTGAGAGAGAAGAACATATCAGGCAAATAATTCAGTCTCGTAAAGCAGAAAGAGAGGCTAAGAGAAAGAAAATCTTTTATGTTAGGCGTGAAGAGGAGAGGATCAGAATATTGCGTGAAGAGGAGGAAGCACGCAAGCGTGAAGGTATTTGTTAAAAGTTTTATGGTTTTTTATGGGGGAGGGGGAGGGGGGTACTTAGAGCATGAGTTGAAACAACTTCTGCAAAGATATCCGTAGGTTTTAATATAATGTACATTAGCGTGGAGTCGTCATTTGTCTGCTTTTGCTCATTGCACTTTTTTGAACTTTGTAGAAGCCGAAAGGAGGAAAAGGGAGGAAGCTGAACGCAAGGCAAAATTGGATGAGATTGCTGAGAAGCAGAGGCAGAGAGAGCGCGAATTGGAAGAAAAAGAAAGACTGCGGAAAGAAATGCTCTTTAGTGGAGGCAAGTCAGGCGATGCTTCTGCTAGGCCTGATGTTTCTCCTGCTTCTCGACCTCAGGAGTCTAGGACTGCTTCTCCTGCTGCTGCAGCTGCTGCGGCTGCAGCCCCGGCCGCAGGAAAATATGTGCCAAGGTTCCTACGTGAACGGACTGAGAGCTCCAGCCCTAATGCACCACCTCCTGAATCTGATCGATGGGGAAGCAGCAGGCCTGACAATCGACCATCTCAGCCAGGGAGCTGGCGCAATGATGATCGTAGACCTGCTGCATTTGGAAGTTCAAGGTCGTCGTGGTCGTCGTCTCGAGTTCCTGCTCGTGGTGGCCCGGAGCGCTAATTGTGGTGGCAGTCTGGCAAACCGAAGGAAGAACAATTTTGGGTTTGATCGAATGCTAAATCGTTTCTCGGAAAAAGAAAAAAAGATGAGTTTTTGGTCCTATTGAGAAAGCAAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGGAAGAAGCAGGAGGGAAAAGGGTGTAATAATATTTGTAGTTGTGTGTTCTAATGTTTTAGGTGGCAGAAAATTTATTGTTGGAAGAGTTATATGAAGTACTTGAGGCGTTGGAAGCTGTGTTGAATAGCATTTTTATGGAGTCTATTTAAATCAATTGCCCCCTTTTTGAGTTGAAACGATTCCAATTTTCTTGGTGCGAACTCGGTGGACTTATTTCTGAGTTTAAGACTTACAAGTTCATACAATAAGTTCATACAATGGGAAAAAAGGGGATTGGAAGTCTTGGGAGAGAACCATCGGTTGGAACAAATATGAATCTATCA

mRNA sequence

CACTGGTTCTTCATGTGTGGCTCAGGTCATTTGACGTTGCATGCTGTCCTTGAGTGAGCTAAATATTTGATCGACTCATGGCTTCTTTTGTCAAGCCAGAGAATGCTTTAAAACGAGCTGAAGAGCTGATAAATGTTGGCCAGAAGCAGGATGCCTTGCAAGCTCTTCATGATCTTATAACTTCAAAGAAATATAGAGCATGGCAGAAACCTCTTGAGAGGATTATGTTTAAGTATGTTGAGCTTTGTGTGGACATGAGGAAAGGAAGGTTTGCAAAGGATGGTTTGATTCAGTACCGTATTGTTTGCCAGCAAGTCAATGTTACTTCTTTAGAGGAAGTAATCAAGCACTTTATGCATCTTTCCACTGAGAAGGCAGAGCAGGCTCGTAGTCAAGCTCAAGCATTAGAAGAAGCTCTTGATGTTGATGACTTGGAAGCTGATAAAAGACCAGAAGATCTGATGCTTAGTTATGTCAGTGGGGAGAAAGGAAAGGACAGATCTGATCGCGAACTTGTTACCCCTTGGTTTAAATTTCTATGGGAGACATATCGAACAGTTCTTGAGATACTAAGGAATAACTCAAAGTTGGAAGCACTTTATGCGATGACAGCCCATCGTGCCTTCCAGTTTTGTAAGCTGTACAAAAGGACAACAGAATTTCGCAGATTATGTGAAATTATCAGAAATCATCTTGCTAATCTCAACAAGTATAGAGACCAAAGAGATCGGCCTGACCTATCTGCTCCAGAGAGCTTGCAGTTGTACCTTGACACAAGATTTGAACAGCTGAAGGTTGCCACGGAGCTTGAACTCTGGCAGGAAGCTTTTCGTTCTGTGGAAGATATTCATGGTTTGATGTGTATGGTGAAGAAAACACCCAAGCCATCGTTGATGGTGGTTTACTACGTCAAATTAACAGAGATCTTCTGGATATCGGATAGTAATCTTTATCATGCCTATGCATGGCTTAAACTTTTCTCCCTTCAGAAGAGTTTCAACAAAAATCTAAGCCAGAAGGACCTACAGCTGATAGCATCATCTGTTGTGTTAGCCGCTCTTGCAGTGCCCCCCTATGACTCCAAGCATGGTGCATCACATTTAGAACTGGAACATGAGAAAGAGCGAAGTTTGAGGATGGCTAATCTCATAGGGTTCGGTTTAGACTCCAAACTTGAGAGTAGAGATGTGCTTTCGAGGGAAAATCTTCTCTCTGAACTGGTGTCTAAAGGAGTCCTGAGCTGTGCAACTCAGGAAATTAAAGATCTTTATCATCTTTTGGAGCATGAGTTCTTCCCTCTCGATCTTGCATTAAAATTGCAACCGTTGTTCACAAAAATATCTAAGCTTGGAGGTAAGCTTTCATCAGCCTCATCTGTACCCGAATTGCAATTGTCTCAATATGTTCCAGCTCTTGAAAAACTTGCTACCCTGAGGCTACTTCAGCAGGTCTCCCATGTATACCAGACTATGAAAATTGAGAGTCTGTCGCAGATGATCCCATTTTTTGATTTTTCTGCCGTGGAGAAAATATTAGTTGATGCAGTTAAACAAAATTTCATCGCCATGAAAGTCGATCATTCAAGGAACATCGTCTTATTTGGCAATTTGGGTATTGAATCAGAAGGGCTTCGGGACCACCTGACTGTGCTTGCTGAGTCCCTAAACAAAGTAAGAGCCATGATCTACCCTCCTGTAAAGAAAACATCAAAAACAGGTGAAATATTGCCTGATTTAGCAGATATTGTTGATAAAGAGCACAAGAGGCTTCTTGCTCGGAAATCAATAATTGAGAAAAGGAAGGAAGAGCAGGAACGACAACTTTTGGAAATGGAACGTGAGGAGGAATCAAGAAGGTTAAAATTACTAAAGATAACTGAAGAGGCTGAGCAGAAGCGTCTTGCTTTAGAATATGAACAAAGGAAAAGTCAACGGCTTCGTAGGGAAATGGAAGAGCGAGAACTTGAAGAAGCACAGGCATTACTTCAGGAAGCTGAAAAGCGTGTTGGTAAAAAGAAGGGAAGCAGGAAGCCGGTTCTTGATTCCGAAAAGTTGACTAAACAAACCTTAATGCAATTGGCCCTTACTGAACAATTAAGGGAGAGGCAGGAAATGGAAAAGAAATTGCAGAAGCTTTCCAAAACTATGGATTATCTAGAAAGAGCAAAAAGAGAAGAGGCAGCAACGTTAATCGAAGCTGCATTTCAGCAACGTTTGCTTGAAGAGAGGACGATTCATGAACGTGATCAGCAGCTGGAGGTCGAGTTAAGCAAGCAGCGCCATGAAGGTGACCTGAAGGAGAAGAACAGATTGGCAAGAATGTTGGAGAGCAAGAAAATTTTCCAAGAAAGAGTTATCAGTCTTCGCCAAGAGGAGTTCAACAAACGTAGAGCTGAGAGAGAAGAACATATCAGGCAAATAATTCAGTCTCGTAAAGCAGAAAGAGAGGCTAAGAGAAAGAAAATCTTTTATGTTAGGCGTGAAGAGGAGAGGATCAGAATATTGCGTGAAGAGGAGGAAGCACGCAAGCGTGAAGAAGCCGAAAGGAGGAAAAGGGAGGAAGCTGAACGCAAGGCAAAATTGGATGAGATTGCTGAGAAGCAGAGGCAGAGAGAGCGCGAATTGGAAGAAAAAGAAAGACTGCGGAAAGAAATGCTCTTTAGTGGAGGCAAGTCAGGCGATGCTTCTGCTAGGCCTGATGTTTCTCCTGCTTCTCGACCTCAGGAGTCTAGGACTGCTTCTCCTGCTGCTGCAGCTGCTGCGGCTGCAGCCCCGGCCGCAGGAAAATATGTGCCAAGGTTCCTACGTGAACGGACTGAGAGCTCCAGCCCTAATGCACCACCTCCTGAATCTGATCGATGGGGAAGCAGCAGGCCTGACAATCGACCATCTCAGCCAGGGAGCTGGCGCAATGATGATCGTAGACCTGCTGCATTTGGAAGTTCAAGGTCGTCGTGGTCGTCGTCTCGAGTTCCTGCTCGTGGTGGCCCGGAGCGCTAATTGTGGTGGCAGTCTGGCAAACCGAAGGAAGAACAATTTTGGGTTTGATCGAATGCTAAATCGTTTCTCGGAAAAAGAAAAAAAGATGAGTTTTTGGTCCTATTGAGAAAGCAAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGGAAGAAGCAGGAGGGAAAAGGGTGTAATAATATTTGTAGTTGTGTGTTCTAATGTTTTAGGTGGCAGAAAATTTATTGTTGGAAGAGTTATATGAAGTACTTGAGGCGTTGGAAGCTGTGTTGAATAGCATTTTTATGGAGTCTATTTAAATCAATTGCCCCCTTTTTGAGTTGAAACGATTCCAATTTTCTTGGTGCGAACTCGGTGGACTTATTTCTGAGTTTAAGACTTACAAGTTCATACAATAAGTTCATACAATGGGAAAAAAGGGGATTGGAAGTCTTGGGAGAGAACCATCGGTTGGAACAAATATGAATCTATCA

Coding sequence (CDS)

ATGGCTTCTTTTGTCAAGCCAGAGAATGCTTTAAAACGAGCTGAAGAGCTGATAAATGTTGGCCAGAAGCAGGATGCCTTGCAAGCTCTTCATGATCTTATAACTTCAAAGAAATATAGAGCATGGCAGAAACCTCTTGAGAGGATTATGTTTAAGTATGTTGAGCTTTGTGTGGACATGAGGAAAGGAAGGTTTGCAAAGGATGGTTTGATTCAGTACCGTATTGTTTGCCAGCAAGTCAATGTTACTTCTTTAGAGGAAGTAATCAAGCACTTTATGCATCTTTCCACTGAGAAGGCAGAGCAGGCTCGTAGTCAAGCTCAAGCATTAGAAGAAGCTCTTGATGTTGATGACTTGGAAGCTGATAAAAGACCAGAAGATCTGATGCTTAGTTATGTCAGTGGGGAGAAAGGAAAGGACAGATCTGATCGCGAACTTGTTACCCCTTGGTTTAAATTTCTATGGGAGACATATCGAACAGTTCTTGAGATACTAAGGAATAACTCAAAGTTGGAAGCACTTTATGCGATGACAGCCCATCGTGCCTTCCAGTTTTGTAAGCTGTACAAAAGGACAACAGAATTTCGCAGATTATGTGAAATTATCAGAAATCATCTTGCTAATCTCAACAAGTATAGAGACCAAAGAGATCGGCCTGACCTATCTGCTCCAGAGAGCTTGCAGTTGTACCTTGACACAAGATTTGAACAGCTGAAGGTTGCCACGGAGCTTGAACTCTGGCAGGAAGCTTTTCGTTCTGTGGAAGATATTCATGGTTTGATGTGTATGGTGAAGAAAACACCCAAGCCATCGTTGATGGTGGTTTACTACGTCAAATTAACAGAGATCTTCTGGATATCGGATAGTAATCTTTATCATGCCTATGCATGGCTTAAACTTTTCTCCCTTCAGAAGAGTTTCAACAAAAATCTAAGCCAGAAGGACCTACAGCTGATAGCATCATCTGTTGTGTTAGCCGCTCTTGCAGTGCCCCCCTATGACTCCAAGCATGGTGCATCACATTTAGAACTGGAACATGAGAAAGAGCGAAGTTTGAGGATGGCTAATCTCATAGGGTTCGGTTTAGACTCCAAACTTGAGAGTAGAGATGTGCTTTCGAGGGAAAATCTTCTCTCTGAACTGGTGTCTAAAGGAGTCCTGAGCTGTGCAACTCAGGAAATTAAAGATCTTTATCATCTTTTGGAGCATGAGTTCTTCCCTCTCGATCTTGCATTAAAATTGCAACCGTTGTTCACAAAAATATCTAAGCTTGGAGGTAAGCTTTCATCAGCCTCATCTGTACCCGAATTGCAATTGTCTCAATATGTTCCAGCTCTTGAAAAACTTGCTACCCTGAGGCTACTTCAGCAGGTCTCCCATGTATACCAGACTATGAAAATTGAGAGTCTGTCGCAGATGATCCCATTTTTTGATTTTTCTGCCGTGGAGAAAATATTAGTTGATGCAGTTAAACAAAATTTCATCGCCATGAAAGTCGATCATTCAAGGAACATCGTCTTATTTGGCAATTTGGGTATTGAATCAGAAGGGCTTCGGGACCACCTGACTGTGCTTGCTGAGTCCCTAAACAAAGTAAGAGCCATGATCTACCCTCCTGTAAAGAAAACATCAAAAACAGGTGAAATATTGCCTGATTTAGCAGATATTGTTGATAAAGAGCACAAGAGGCTTCTTGCTCGGAAATCAATAATTGAGAAAAGGAAGGAAGAGCAGGAACGACAACTTTTGGAAATGGAACGTGAGGAGGAATCAAGAAGGTTAAAATTACTAAAGATAACTGAAGAGGCTGAGCAGAAGCGTCTTGCTTTAGAATATGAACAAAGGAAAAGTCAACGGCTTCGTAGGGAAATGGAAGAGCGAGAACTTGAAGAAGCACAGGCATTACTTCAGGAAGCTGAAAAGCGTGTTGGTAAAAAGAAGGGAAGCAGGAAGCCGGTTCTTGATTCCGAAAAGTTGACTAAACAAACCTTAATGCAATTGGCCCTTACTGAACAATTAAGGGAGAGGCAGGAAATGGAAAAGAAATTGCAGAAGCTTTCCAAAACTATGGATTATCTAGAAAGAGCAAAAAGAGAAGAGGCAGCAACGTTAATCGAAGCTGCATTTCAGCAACGTTTGCTTGAAGAGAGGACGATTCATGAACGTGATCAGCAGCTGGAGGTCGAGTTAAGCAAGCAGCGCCATGAAGGTGACCTGAAGGAGAAGAACAGATTGGCAAGAATGTTGGAGAGCAAGAAAATTTTCCAAGAAAGAGTTATCAGTCTTCGCCAAGAGGAGTTCAACAAACGTAGAGCTGAGAGAGAAGAACATATCAGGCAAATAATTCAGTCTCGTAAAGCAGAAAGAGAGGCTAAGAGAAAGAAAATCTTTTATGTTAGGCGTGAAGAGGAGAGGATCAGAATATTGCGTGAAGAGGAGGAAGCACGCAAGCGTGAAGAAGCCGAAAGGAGGAAAAGGGAGGAAGCTGAACGCAAGGCAAAATTGGATGAGATTGCTGAGAAGCAGAGGCAGAGAGAGCGCGAATTGGAAGAAAAAGAAAGACTGCGGAAAGAAATGCTCTTTAGTGGAGGCAAGTCAGGCGATGCTTCTGCTAGGCCTGATGTTTCTCCTGCTTCTCGACCTCAGGAGTCTAGGACTGCTTCTCCTGCTGCTGCAGCTGCTGCGGCTGCAGCCCCGGCCGCAGGAAAATATGTGCCAAGGTTCCTACGTGAACGGACTGAGAGCTCCAGCCCTAATGCACCACCTCCTGAATCTGATCGATGGGGAAGCAGCAGGCCTGACAATCGACCATCTCAGCCAGGGAGCTGGCGCAATGATGATCGTAGACCTGCTGCATTTGGAAGTTCAAGGTCGTCGTGGTCGTCGTCTCGAGTTCCTGCTCGTGGTGGCCCGGAGCGCTAA

Protein sequence

MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDMRKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKLFSLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHEKERSLRMANLIGFGLDSKLESRDVLSRENLLSELVSKGVLSCATQEIKDLYHLLEHEFFPLDLALKLQPLFTKISKLGGKLSSASSVPELQLSQYVPALEKLATLRLLQQVSHVYQTMKIESLSQMIPFFDFSAVEKILVDAVKQNFIAMKVDHSRNIVLFGNLGIESEGLRDHLTVLAESLNKVRAMIYPPVKKTSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKITEEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLTKQTLMQLALTEQLRERQEMEKKLQKLSKTMDYLERAKREEAATLIEAAFQQRLLEERTIHERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFNKRRAEREEHIRQIIQSRKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAEKQRQRERELEEKERLRKEMLFSGGKSGDASARPDVSPASRPQESRTASPAAAAAAAAAPAAGKYVPRFLRERTESSSPNAPPPESDRWGSSRPDNRPSQPGSWRNDDRRPAAFGSSRSSWSSSRVPARGGPER

Homology

[Close]

BLAST of Cp4.1LG04g08460 vs. Swiss-Prot
Match: EIF3A_ARATH (Eukaryotic translation initiation factor 3 subunit A OS=Arabidopsis thaliana GN=TIF3A1 PE=1 SV=1)

HSP 1 Score: 1278.8 bits (3308), Expect = 0.0e+00
Identity = 722/988 (73.08%), Postives = 832/988 (84.21%), Query Frame = 1


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MA+F KPENALKRA+ELINVGQKQDALQALHDLITSK+YRAWQKPLE+IMFKY++LCVD+
Sbjct: 1   MANFAKPENALKRADELINVGQKQDALQALHDLITSKRYRAWQKPLEKIMFKYLDLCVDL 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLE 120
           ++GRFAKDGLIQYRIVCQQVNV+SLEEVIKHF+HL+T+KAEQARSQA ALEEALDVDDLE
Sbjct: 61  KRGRFAKDGLIQYRIVCQQVNVSSLEEVIKHFLHLATDKAEQARSQADALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180
           AD++PEDL LS VSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH
Sbjct: 121 ADRKPEDLQLSIVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           +AFQFCK YKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRF+QLKV
Sbjct: 181 KAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFDQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATEL LWQEAFRSVEDI+GLMCMVKKTPK SL++VYY KLTEIFWIS S+LYHAYAW KL
Sbjct: 241 ATELGLWQEAFRSVEDIYGLMCMVKKTPKSSLLMVYYSKLTEIFWISSSHLYHAYAWFKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHEKERSLRMANLIGF 360
           FSLQK+FNKNLSQKDLQLIASSVVLAAL++PP+D    ASH+ELE+EKER+LRMANLIGF
Sbjct: 301 FSLQKNFNKNLSQKDLQLIASSVVLAALSIPPFDRAQSASHMELENEKERNLRMANLIGF 360

Query: 361 GLDSKLESRDVLSRENLLSELVSKGVLSCATQEIKDLYHLLEHEFFPLDLALKLQPLFTK 420
            L+ K E +D+LSR  LLSELVSKGVLSCA+QE+KDL+H+LEHEF PLDL  K+QPL  K
Sbjct: 361 NLEPKFEGKDMLSRSALLSELVSKGVLSCASQEVKDLFHVLEHEFHPLDLGSKIQPLLEK 420

Query: 421 ISKLGGKLSSASSVPELQLSQYVPALEKLATLRLLQQVSHVYQTMKIESLSQMIPFFDFS 480
           ISK GGKLSSA S+PE+QLSQYVP+LEKLATLRLLQQVS +YQT++IESLSQ++PFF FS
Sbjct: 421 ISKSGGKLSSAPSLPEVQLSQYVPSLEKLATLRLLQQVSKIYQTIRIESLSQLVPFFQFS 480

Query: 481 AVEKILVDAVKQNFIAMKVDHSRNIVLFGNLGIESEGLRDHLTVLAESLNKVRAMIYPPV 540
            VEKI VDAVK NF+AMKVDH + +V+FGNLGIES+GLRDHL V AESL+KVRAM+YP  
Sbjct: 481 EVEKISVDAVKNNFVAMKVDHMKGVVIFGNLGIESDGLRDHLAVFAESLSKVRAMLYPVP 540

Query: 541 KKTSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKIT 600
            K SK   ++P+LAD V+KEHKRLLARKSIIEKRKE+QERQ LEMEREEE +RLKL K+T
Sbjct: 541 SKASKLAGVIPNLADTVEKEHKRLLARKSIIEKRKEDQERQQLEMEREEEQKRLKLQKLT 600

Query: 601 EEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLA E  +R+ QR+ RE+EE+ELEEAQALL+E EKR+  KKG +KP+LD EK+T
Sbjct: 601 EEAEQKRLAAELAERRKQRILREIEEKELEEAQALLEETEKRM--KKGKKKPLLDGEKVT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLSKTMDYLERAKREEAATLIEAAFQQRLLEERTIH 720
           KQ++ + ALTEQL+ERQEMEKKLQKL+KTMDYLERAKREEAA LIEAA+Q+RL+EER  +
Sbjct: 661 KQSVKERALTEQLKERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQRRLVEEREFY 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFNKRRAEREEHIRQ 780
           ER+QQ EVELSK+RHE DLKEKNRL+RML +K+IFQ +VIS RQ EF++ R EREE I +
Sbjct: 721 EREQQREVELSKERHESDLKEKNRLSRMLGNKEIFQAQVISRRQAEFDRIRTEREERISK 780

Query: 781 IIQSRKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAE 840
           II+ +K ER+ KRK+I+Y++ EEERIR L+EEEEARK+EEAER K+ EAERKA LD+  E
Sbjct: 781 IIREKKQERDIKRKQIYYLKIEEERIRKLQEEEEARKQEEAERLKKVEAERKANLDKAFE 840

Query: 841 KQRQRERELEEKERLRKEMLFSGGKSGDAS-ARPDVSPASRPQESRTASPAAAAAAAAAP 900
           KQRQRE ELEEK R  +E L  G  +  A  A P V+P        T +PAAAAAAA AP
Sbjct: 841 KQRQREIELEEKSRREREELLRGTNAPPARLAEPTVTPVG------TTAPAAAAAAAGAP 900

Query: 901 AAGKYVPRFLRERTESSSPNA-------------PPPESDRWGSSRPDNRPSQPGSWRND 960
           AA  YVP++ R+ TE S P+A             PPP  D WGS+R        G+ +N 
Sbjct: 901 AA-PYVPKWKRQTTEVSGPSAPTSSETDRRSNRGPPPGDDHWGSNR--------GAAQNT 960

Query: 961 DRRPAAFGSSRSSWSSSR----VPARGG 971
           DR           W+S+R     PA GG
Sbjct: 961 DR-----------WTSNRERSGPPAEGG 960

[Close]

BLAST of Cp4.1LG04g08460 vs. Swiss-Prot
Match: EIF3A_TOBAC (Eukaryotic translation initiation factor 3 subunit A OS=Nicotiana tabacum GN=TIF3A1 PE=2 SV=1)

HSP 1 Score: 1272.3 bits (3291), Expect = 0.0e+00
Identity = 719/968 (74.28%), Postives = 832/968 (85.95%), Query Frame = 1


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MA+F KPENALKRAEELI VGQKQ+ALQALHDLITS++YRAWQK LERIMFKYVELCVDM
Sbjct: 1   MATFAKPENALKRAEELITVGQKQEALQALHDLITSRRYRAWQKTLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLE 120
           R+GRFAKDGLIQYRIVCQQVN+ SLEEVIKHFMHL+TE+AE AR+QAQALEEALDV+DLE
Sbjct: 61  RRGRFAKDGLIQYRIVCQQVNINSLEEVIKHFMHLATERAELARNQAQALEEALDVEDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNS+LEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSRLEALYAMTAH 180

Query: 181 RAFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCK YKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV
Sbjct: 181 RAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATEL LWQEAFRS+EDI+GLMCMVKKTPK SLMVVYY KLTEIFW+S ++LYHAYAWLKL
Sbjct: 241 ATELGLWQEAFRSIEDIYGLMCMVKKTPKASLMVVYYGKLTEIFWMSSNHLYHAYAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHEKERSLRMANLIGF 360
           FSLQKSFNKNLSQKDLQLIASSVVLAAL+VPPYD  +GASHLELE+EKERSLR+ANLIGF
Sbjct: 301 FSLQKSFNKNLSQKDLQLIASSVVLAALSVPPYDQSYGASHLELENEKERSLRVANLIGF 360

Query: 361 GLDSKLESRDVLSRENLLSELVSKGVLSCATQEIKDLYHLLEHEFFPLDLALKLQPLFTK 420
            ++ K E+R  LSR +LLSELVSKGV+SC TQE+KDLYHLLE+EF PLDLALK+QP+ +K
Sbjct: 361 EVEPKAENRVALSRSSLLSELVSKGVMSCVTQEVKDLYHLLENEFLPLDLALKVQPVLSK 420

Query: 421 ISKLGGKLSSASSVPELQLSQYVPALEKLATLRLLQQVSHVYQTMKIESLSQMIPFFDFS 480
           ISKLGGKLSS SSVPE+QLSQYVPALEKLATLRLLQQVS VYQT++I+++S+MIPFFDF+
Sbjct: 421 ISKLGGKLSSVSSVPEVQLSQYVPALEKLATLRLLQQVSQVYQTIQIDNISKMIPFFDFT 480

Query: 481 AVEKILVDAVKQNFIAMKVDHSRNIVLFGNLGIESEGLRDHLTVLAESLNKVRAMIYPPV 540
            +EKI VDAV++NF+A+KVDH + +    N  +  +        LAESL+K R MIYPP 
Sbjct: 481 VIEKISVDAVRRNFLAIKVDHMKGLSSLVNRVLRRKDSGIICLFLAESLSKARTMIYPPA 540

Query: 541 KKTSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKIT 600
           KK +K GE L +LA+IV+KEHKRLLARKSIIEKRKEEQER LLEMER EE++R  + K+T
Sbjct: 541 KKAAKLGEALSNLAEIVEKEHKRLLARKSIIEKRKEEQERLLLEMERVEETKRRDVQKMT 600

Query: 601 EEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKR+A EYEQR++QR+ +E+E+RELEEAQALL EAEKR  +KK   KPVL+ EK+T
Sbjct: 601 EEAEQKRIAAEYEQRRNQRILKEIEDRELEEAQALLHEAEKRSKRKK---KPVLEGEKMT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLSKTMDYLERAKREEAATLIEAAFQQRLLEERTIH 720
           K+ +M+LAL EQLRERQEMEKKL K +K+MD+LERAKREEAA LIE+AF+QRL EE  +H
Sbjct: 661 KKVIMELALNEQLRERQEMEKKLLKFAKSMDHLERAKREEAAPLIESAFKQRLAEEAALH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFNKRRAEREEHIRQ 780
           ER+QQ E+ELS+QRH GDL+EK RLARMLE+K+I QE+V+S R+ EF + + ER+E I Q
Sbjct: 721 EREQQQEIELSRQRHAGDLEEKRRLARMLENKRILQEKVVSSREAEFTRMKRERQERISQ 780

Query: 781 IIQSRKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAE 840
           IIQSRK EREA+RK IF++R EEER + L+EEEEARKREEAERRK+EEAER+AKLDEIAE
Sbjct: 781 IIQSRKQEREARRKMIFFLRSEEERQKRLQEEEEARKREEAERRKKEEAERQAKLDEIAE 840

Query: 841 KQRQRERELEEKERLRKEMLFSGGKSGDASARPDVSPA-SRPQESRTASP-AAAAAAAAA 900
           KQR+R  ELEEKE+  +E +    KS     +P   P   RP E   A+P  AAAA A  
Sbjct: 841 KQRRRMLELEEKEKREREEILR--KSTAVLPKPAEPPTLGRPAELGGAAPIPAAAATAPT 900

Query: 901 PAAGKYVPRFLRERTESSSPNAPPPESDRW-GSSRPDNRPSQPGSWRNDDRRPAAFGS-S 960
           P  GKYVP+ LR + + +   APPPE+D+W G S+PD+RP    SWR D+R+P +FGS S
Sbjct: 901 PGPGKYVPKHLRTKMDGAG-QAPPPETDKWGGGSKPDDRP----SWR-DERKPPSFGSGS 957

Query: 961 RSSWSSSR 965
           R+SW +SR
Sbjct: 961 RTSWPASR 957

[Close]

BLAST of Cp4.1LG04g08460 vs. Swiss-Prot
Match: EIF3A_MAIZE (Eukaryotic translation initiation factor 3 subunit A OS=Zea mays GN=TIF3A1 PE=2 SV=1)

HSP 1 Score: 1149.8 bits (2973), Expect = 0.0e+00
Identity = 664/975 (68.10%), Postives = 781/975 (80.10%), Query Frame = 1


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MA+F KPENALKRAEELI+VGQKQ ALQALHDLITSK+YR+WQKPLE+IM KYVELCVD+
Sbjct: 1   MATFAKPENALKRAEELIHVGQKQSALQALHDLITSKRYRSWQKPLEKIMMKYVELCVDL 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNV+SLE+VIKHFM LS EKAEQA+SQ +ALE+ALDV+DLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVSSLEDVIKHFMQLSNEKAEQAKSQVEALEDALDVEDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180
           ADKRPEDLMLS+VSGEKGKDRSD+E+VTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSFVSGEKGKDRSDKEVVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCK YKRTTEFR     IRNHLANLNKYRDQRDRPDL+APESLQLYLDTR EQLKV
Sbjct: 181 RAFQFCKQYKRTTEFRSCVRSIRNHLANLNKYRDQRDRPDLTAPESLQLYLDTRVEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATEL LWQEAFRSVEDIHGLM MVKK PKPS++VVYY KLTEIFWISDS+LYHAYAWLKL
Sbjct: 241 ATELSLWQEAFRSVEDIHGLMTMVKKMPKPSILVVYYAKLTEIFWISDSHLYHAYAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHEKERSLRMANLIGF 360
           F+LQKS+NKNLSQKDLQLIASSV+LAAL+V PYD K+GA   E E+EKER++R++NL+ F
Sbjct: 301 FNLQKSYNKNLSQKDLQLIASSVLLAALSVSPYDKKYGA--FETENEKERNMRLSNLVNF 360

Query: 361 GLDSKLESRDVLSRENLLSELVSKGVLSCATQEIKDLYHLLEHEFFPLDLALKLQPLFTK 420
            LD+K E+R++ SR  LLSEL SKGVLSCA+QE++DLY+LLEH F PLDLA K+QPL  K
Sbjct: 361 SLDNKRENREMPSRPYLLSELASKGVLSCASQEVRDLYNLLEHRFLPLDLASKVQPLLLK 420

Query: 421 ISKLGGKLSSASSVPELQLSQYVPALEKLATLRLLQQVSHVYQTMKIESLSQMIPFFDFS 480
           ISK+GGKLSSASSVPE++LSQY+ ALEKL TLR+LQQ S +++++KI+ LS+MIPFFDFS
Sbjct: 421 ISKIGGKLSSASSVPEVKLSQYISALEKLTTLRVLQQASCIFKSIKIDMLSRMIPFFDFS 480

Query: 481 AVEKILVDAVKQNFIAMKVDHSRNIVLFGNLGIESEGLRDHLTVLAESLNKVRAMIYPPV 540
            VEKI VDA KQNF+A+KVDH   +V FG + IES+GL DHL+VLA+SLNK R  I PPV
Sbjct: 481 VVEKISVDAAKQNFVAIKVDHLSGVVQFGTVDIESDGLSDHLSVLADSLNKARIHICPPV 540

Query: 541 KKTSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKIT 600
           KK SK GE L  LA IV+ EHKRLLARKSIIEKRKEE ERQ+LE E+EEE +R+   K T
Sbjct: 541 KKPSKLGESLISLAAIVENEHKRLLARKSIIEKRKEELERQILEKEKEEEKKRMSSQKKT 600

Query: 601 EEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
            + E+ RL  E  QR+  R+RRE+EE+   EA+ +L++        K  +K V+   +LT
Sbjct: 601 VDEERVRLLNEQRQREQDRIRREIEEKNKAEAKKMLEDL------NKAGKKHVVVEGELT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLSKTMDYLERAKREEAATLIEAAFQQRLLEERTIH 720
           K+  M+LA  EQL+ER EMEKKLQK +KTMDYLERAKR+E A LIE AFQ+RL EE+ +H
Sbjct: 661 KEAYMELARNEQLKERHEMEKKLQKFAKTMDYLERAKRQEEAPLIEQAFQKRLEEEKILH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFNKRRAEREEHIRQ 780
           E++Q  E+ELSKQ H  DL+EKNRL+RMLE K   QER+I  R  EF + + ER+E + +
Sbjct: 721 EQEQLREIELSKQHHASDLQEKNRLSRMLEHKNALQERIIQERAAEFGRLKKERDERMNR 780

Query: 781 IIQSRKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAE 840
           +I SRK ERE  RK +FY+  EE+RI +LREEEEARKRE  ERRKREEAERKAKLD IAE
Sbjct: 781 LISSRKHERETVRKLMFYLNLEEQRIEMLREEEEARKREAEERRKREEAERKAKLDAIAE 840

Query: 841 KQRQRERELEEKERLRKEMLFSGGKSGDASARPDVSPASRPQESRTASPAAAAAAAAAPA 900
           KQR RE ELEEK +  +E L  G    +A   PD +P ++P   R ++ AAAAAAAAAPA
Sbjct: 841 KQRLREIELEEKAKATREKLLKG---SEAVRAPDSAPVAQP--PRESAAAAAAAAAAAPA 900

Query: 901 AGKYVPRFLRERTESSSPNAPPPESDRWGSSRP---DNRPSQ---PGSWRNDD-----RR 960
             KY+P+F R    SS P+    E DRWGS  P   D  P++   P S ++ D     R 
Sbjct: 901 PSKYIPKFKRGGDSSSIPSGSRDE-DRWGSRGPLRQDGPPARLDAPSSRQDTDRWRGSRF 960

Query: 961 PAAFGSSRSSWSSSR 965
           P+   SS S+WS SR
Sbjct: 961 PSNSTSSSSTWSRSR 961

[Close]

BLAST of Cp4.1LG04g08460 vs. Swiss-Prot
Match: EIF3A_DANRE (Eukaryotic translation initiation factor 3 subunit A OS=Danio rerio GN=eif3a PE=2 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.6e-135
Identity = 330/891 (37.04%), Postives = 536/891 (60.16%), Query Frame = 1


Query: 2   ASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDMR 61
           A F +PENALKRA E + VG+KQ AL  L+D+I SKK+R WQK  E IM KY+ELCVD+R
Sbjct: 3   AYFQRPENALKRANEFLEVGKKQPALDVLYDVIKSKKHRTWQKIHEPIMLKYLELCVDLR 62

Query: 62  KGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEA 121
           K   AK+GL QY+ +CQQVN+ SLE+V++ ++ L+ EK E A+ ++Q +   LD++DL+ 
Sbjct: 63  KSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKLAEEKTETAKEESQQM--VLDIEDLDN 122

Query: 122 DKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHR 181
            + PE ++LS VSGE  +DR+DR L+TPW KFLWE+YR  L++LRNNSK+E LY   A +
Sbjct: 123 IQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSKVERLYHDIAQQ 182

Query: 182 AFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVA 241
           AF+FC  Y R  EFR+LC+ +R HL  + ++ +Q    +L+ PES  ++L+TR  QL  A
Sbjct: 183 AFKFCLQYTRKAEFRKLCDNLRMHLGQIQRHHNQSTAINLNNPESQSMHLETRLVQLDSA 242

Query: 242 TELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKLF 301
             +ELWQEAF++VEDIHGL  + KK PKP LM  YY K++ +FW S + L+H+    +L+
Sbjct: 243 ISMELWQEAFKAVEDIHGLFALSKKPPKPQLMANYYNKVSTVFWKSGNALFHSCTLHRLY 302

Query: 302 SLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHE---KERSLRMANLI 361
            L +   KNL+Q+++Q +++ V+LA L++P    +   + L L+ +    E+  R+A L+
Sbjct: 303 HLSREMRKNLTQEEMQRMSTRVLLATLSIPITPERTDIARL-LDMDGIIVEKHRRLATLL 362

Query: 362 GFGLDSKLESRDVLSRENLLSELVSKGVLSCATQEIKDLYHLLEHEFFPLDLALKLQPLF 421
           G         +   +R++L++++V   +L     E+K+LY+ LE +F PL L  ++  + 
Sbjct: 363 GL--------QSPPTRQSLINDMVRFNLLQYVVPEVKELYNWLEVDFHPLKLCGRVTKVL 422

Query: 422 TKISKLGGKLSSASSVPELQLSQYVPALEKLATLRLLQQVSHVYQTMKIESLSQMIPFFD 481
             +     K        E  L QYVP L+    LRLLQQV+ +YQ+++   L+ ++PF D
Sbjct: 423 NWVRDQAEK--------ESDLQQYVPHLQNNTILRLLQQVAQIYQSIEFSRLASLVPFVD 482

Query: 482 FSAVEKILVDAVKQNFIAMKVDHSRNIVLFGN----------------LGIESEGLRDHL 541
              +E+ +VDA +   + +++DHS   + FG+                  + SE +R+ L
Sbjct: 483 AFQLERSIVDAARHCDLQVRIDHSSRTLSFGSDLNYSTKEDSPVGPFLQNMPSEQIRNQL 542

Query: 542 TVLAESLNKVRAMIYPP---VKKTSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQE 601
           T ++ SL K   +I P         +  + +        KEH+R+LAR+  IE+RKE  E
Sbjct: 543 TAMSSSLAKAIQVIKPASILQDHEEQRQQAITAYLKNARKEHQRILARRQTIEERKERLE 602

Query: 602 RQLLEMEREEESRRLKLLKITEEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEA 661
              ++ E+EE  +R   L+   +AE++RL  E ++R+ +R+ +E E+ + +  +  L++ 
Sbjct: 603 SLNIQREKEELEQREAELQKVRKAEEERLRQEAKEREKERIMQEHEQIKKKTVRERLEQI 662

Query: 662 EK-RVGKKKGSRKPVLDSEKLTKQTLMQLALTEQLRERQEMEKKLQKLSKTMDYLERAKR 721
           +K  +G K      + D E+L    +M   + +  +E++E++++L+   K +DY ERAKR
Sbjct: 663 KKTELGAKAFKDIDIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAKR 722

Query: 722 EEAATLIEAAFQQRLLEERTIHERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQER 781
            E   LI+ A++++ +++  + E  ++  +   K   E  L+ K R++RM+E K+ F  +
Sbjct: 723 LEEIPLIKKAYEEQRIKDMELWELQEEERITNMKMEREKALEHKQRMSRMMEDKENFLSK 782

Query: 782 VISLRQ---EEFNKRRAER-EEHIRQIIQSRKAEREAKRKKIFYVRREEERIRI----LR 841
           + + R    EE  K+  ER  E  ++ ++ RK +R+  R+K FY ++EEE  RI    L+
Sbjct: 783 IKAARSFIYEEKLKQFQERLVEERKKRLEERKKQRKEDRRKAFYHQKEEEAQRIREEQLK 842

Query: 842 EEEEARKREEAERRKREE---AERKAKLDEIAEKQRQRERELEEKERLRKE 859
           +E E R+R E E+R+ EE    ER  KL+E   KQR R++E+EE+ER ++E
Sbjct: 843 KEREERERLEQEQREEEEREYQERLRKLEEQERKQRARQQEIEERERRKEE 874

[Close]

BLAST of Cp4.1LG04g08460 vs. Swiss-Prot
Match: EIF3A_HUMAN (Eukaryotic translation initiation factor 3 subunit A OS=Homo sapiens GN=EIF3A PE=1 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 1.9e-133
Identity = 365/1016 (35.93%), Postives = 581/1016 (57.19%), Query Frame = 1


Query: 2   ASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDMR 61
           A F +PENALKRA E + VG+KQ AL  L+D++ SKK+R WQK  E IM KY+ELCVD+R
Sbjct: 3   AYFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHRTWQKIHEPIMLKYLELCVDLR 62

Query: 62  KGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEA 121
           K   AK+GL QY+ +CQQVN+ SLE+V++ ++ ++ EK E A+ ++Q +   LD++DL+ 
Sbjct: 63  KSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKMAEEKTEAAKEESQQM--VLDIEDLDN 122

Query: 122 DKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHR 181
            + PE ++LS VSGE  +DR+DR L+TPW KFLWE+YR  L++LRNNS++E LY   A +
Sbjct: 123 IQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERLYHDIAQQ 182

Query: 182 AFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVA 241
           AF+FC  Y R  EFR+LC+ +R HL+ + ++ +Q    +L+ PES  ++L+TR  QL  A
Sbjct: 183 AFKFCLQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLETRLVQLDSA 242

Query: 242 TELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKLF 301
             +ELWQEAF++VEDIHGL  + KK PKP LM  YY K++ +FW S + L+HA    +L+
Sbjct: 243 ISMELWQEAFKAVEDIHGLFSLSKKPPKPQLMANYYNKVSTVFWKSGNALFHASTLHRLY 302

Query: 302 SLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHE---KERSLRMANLI 361
            L +   KNL+Q ++Q +++ V+LA L++P    +   + L L+ +    E+  R+A L+
Sbjct: 303 HLSREMRKNLTQDEMQRMSTRVLLATLSIPITPERTDIARL-LDMDGIIVEKQRRLATLL 362

Query: 362 GFGLDSKLESRDVLSRENLLSELVSKGVLSCATQEIKDLYHLLEHEFFPLDLALKLQPLF 421
           G             +R  L++++V   VL     E+KDLY+ LE EF PL L  ++    
Sbjct: 363 GLQAPP--------TRIGLINDMVRFNVLQYVVPEVKDLYNWLEVEFNPLKLCERV---- 422

Query: 422 TKISKLGGKLSSASSVPELQLSQYVPALEKLATLRLLQQVSHVYQTMKIESLSQMIPFFD 481
           TK+  L          PELQ  QYVP L+    LRLLQQVS +YQ+++   L+ ++PF D
Sbjct: 423 TKV--LNWVREQPEKEPELQ--QYVPQLQNNTILRLLQQVSQIYQSIEFSRLTSLVPFVD 482

Query: 482 FSAVEKILVDAVKQNFIAMKVDHSRNIVLFGN----------------LGIESEGLRDHL 541
              +E+ +VDA +   + +++DH+   + FG+                  + SE +R+ L
Sbjct: 483 AFQLERAIVDAARHCDLQVRIDHTSRTLSFGSDLNYATREDAPIGPHLQSMPSEQIRNQL 542

Query: 542 TVLAESLNKVRAMIYPP-VKKTSKTGEILPDLADIVD--KEHKRLLARKSIIEKRKEEQE 601
           T ++  L K   +I P  + +  +    L   A + +  KEH+R+LAR+  IE+RKE  E
Sbjct: 543 TAMSSVLAKALEVIKPAHILQEKEEQHQLAVTAYLKNSRKEHQRILARRQTIEERKERLE 602

Query: 602 RQLLEMEREEESRRLKLLKITEEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEA 661
              ++ E+EE  +R   L+   +AE++RL  E ++R+ +R+ +E E+ + +  +  L++ 
Sbjct: 603 SLNIQREKEELEQREAELQKVRKAEEERLRQEAKEREKERILQEHEQIKKKTVRERLEQI 662

Query: 662 EK-RVGKKKGSRKPVLDSEKLTKQTLMQLALTEQLRERQEMEKKLQKLSKTMDYLERAKR 721
           +K  +G K      + D E+L    +M   + +  +E++E++++L+   K +DY ERAKR
Sbjct: 663 KKTELGAKAFKDIDIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAKR 722

Query: 722 EEAATLIEAAFQQRLLEERTIHERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQER 781
            E   LI++A++++ +++  + E+ ++  +   +   E  L+ KNR++RMLE + +F  R
Sbjct: 723 LEEIPLIKSAYEEQRIKDMDLWEQQEEERITTMQLEREKALEHKNRMSRMLEDRDLFVMR 782

Query: 782 VISLRQEEFNKRRAEREEHIRQ----IIQSRKAEREAKRKKIFYVRREEERIRILREE-- 841
           + + RQ  + ++  + EE + +     ++ RK +R+ +R+  +Y  +EEE  R   E+  
Sbjct: 783 LKAARQSVYEEKLKQFEERLAEERHNRLEERKRQRKEERRITYYREKEEEEQRRAEEQML 842

Query: 842 EEARKREEAERRKREE-----AERKAKLDEIAEKQRQRERELEEKERLRKEMLFSGGKSG 901
           +E  +RE AER KREE      ER  KL+E+  K+RQRE E+EE+ER R+E      + G
Sbjct: 843 KEREERERAERAKREEELREYQERVKKLEEVERKKRQRELEIEERERRREE----ERRLG 902

Query: 902 DASARPDVSPASRPQESRTASPAAAAAAAAAPAAGKYVPRFLRERTESSSPNAPPPESDR 961
           D+S        SR ++SR     +       P A            +S     PP +  R
Sbjct: 903 DSS-------LSR-KDSRWGDRDSEGTWRKGPEA------------DSEWRRGPPEKEWR 962

Query: 962 WGSSRPDNRPSQPGSWRNDDRRPAAFGSSRSSWSS-----SRVPARG-----GPER 974
            G  R ++R     S R D+ RP   G       S      RVP RG     GP R
Sbjct: 963 RGEGRDEDR-----SHRRDEERPRRLGDDEDREPSLRPDDDRVPRRGMDDDRGPRR 970

[Close]

BLAST of Cp4.1LG04g08460 vs. TrEMBL
Match: A0A0A0LVH6_CUCSA (Eukaryotic translation initiation factor 3 subunit A OS=Cucumis sativus GN=Csa_1G537630 PE=3 SV=1)

HSP 1 Score: 1493.8 bits (3866), Expect = 0.0e+00
Identity = 836/973 (85.92%), Postives = 869/973 (89.31%), Query Frame = 1


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM
Sbjct: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQAR+QAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVL+ILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCK+YKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV
Sbjct: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL
Sbjct: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHEKERSLRMANLIGF 360
           FSLQKSFNKNLSQKDLQLIASSV+LAALAV PYDSKHGASHLELEHEKER+LRMANLIGF
Sbjct: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360

Query: 361 GLDSKLESRDVLSRENLLSELVSKGVLSCATQEIKDLYHLLEHEFFPLDLALKLQPLFTK 420
            LDSKLESRDVLSRENL SELVSKGVLSCATQE+KDLYHLLEHEFF LDLA KLQPL  K
Sbjct: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420

Query: 421 ISKLGGKLSSASSVPELQLSQYVPALEKLATLRLLQQVSHVYQTMKIESLSQMIPFFDFS 480
           +SKLGGKLSSASSVPE+QLSQYVPALEKLATLRLLQQVS VYQTMKIESLSQMIPFFDFS
Sbjct: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480

Query: 481 AVEKILVDAVKQNFIAMKVDHSRNIVLFGNLGIESEGLRDHLTVLAESLNKVRAMIYPPV 540
           AVEKI VDAVKQNFI MKVDHSRNIVLFGNLGIES+GLRDHLTV AESLNK RAMIYPPV
Sbjct: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540

Query: 541 KKTSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKIT 600
            K SKT +ILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKL KIT
Sbjct: 541 LKASKTSDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600

Query: 601 EEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLA EYEQRK+QR+RRE+EERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT
Sbjct: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLSKTMDYLERAKREEAATLIEAAFQQRLLEERTIH 720
           KQTLMQLALTEQLRERQEMEKKLQKL+KTMDYLERAKREEAATLIEAAFQQRLLEER IH
Sbjct: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFNKRRAEREEHIRQ 780
           ERDQQLEVELSKQRHEGDLKEKNRL+RM+ESKK FQERVISLRQEEF++RR EREEHIRQ
Sbjct: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780

Query: 781 IIQSRKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAE 840
           IIQ+RKAEREA+RKKIFYVRREEERIRILREEEEARKRE     + + A     L+    
Sbjct: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREGDAPARPDVAPSSQPLEP--- 840

Query: 841 KQRQRERELEEKERLRKEMLFSGGKSGDASARPDVSPASRPQESRTASPAAAAAAAAAPA 900
                                +   +  A+A    SPA                      
Sbjct: 841 --------------------GTAAPAAAAAAAAATSPAK--------------------- 900

Query: 901 AGKYVPRFLRERTESSSPNAPPPESDRWGSSRPDNRPSQPGSWRNDDRRPAAFGSSRSSW 960
              YVPRF   RTE+S+P+APPP+S RWG SRPDNRPS+P SWRNDD R +AFGSSR SW
Sbjct: 901 ---YVPRF--RRTEASNPDAPPPDSGRWGGSRPDNRPSRPDSWRNDDSR-SAFGSSRPSW 923

Query: 961 SSSRVPARGGPER 974
           SSSR PAR   +R
Sbjct: 961 SSSRAPARASTDR 923

[Close]

BLAST of Cp4.1LG04g08460 vs. TrEMBL
Match: A0A0A0M147_CUCSA (Eukaryotic translation initiation factor 3 subunit A OS=Cucumis sativus GN=Csa_1G538140 PE=3 SV=1)

HSP 1 Score: 1466.8 bits (3796), Expect = 0.0e+00
Identity = 820/965 (84.97%), Postives = 861/965 (89.22%), Query Frame = 1


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           M SFVKPENALKRAEELINVGQKQDALQALHDLITS +YRAWQKPLERIMFKYVELCVDM
Sbjct: 1   MTSFVKPENALKRAEELINVGQKQDALQALHDLITSTRYRAWQKPLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHF+HLSTEKAEQARSQAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFLHLSTEKAEQARSQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCK+YKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTR EQLKV
Sbjct: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRIEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATEL+LWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISD+NLYHA+AWLKL
Sbjct: 241 ATELKLWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDNNLYHAHAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHEKERSLRMANLIGF 360
           FS+QKSFNKNLSQKDLQLIASSV+LAALAV PYDSKHGASHLELEHEKER+LRMANLIGF
Sbjct: 301 FSIQKSFNKNLSQKDLQLIASSVILAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360

Query: 361 GLDSKLESRDVLSRENLLSELVSKGVLSCATQEIKDLYHLLEHEFFPLDLALKLQPLFTK 420
            LDSKLESRDVLSR NLLSELVSKGVLSC  QE+KDLYHLLEHEFFPLDLA KLQPL  K
Sbjct: 361 SLDSKLESRDVLSRANLLSELVSKGVLSCTIQEVKDLYHLLEHEFFPLDLATKLQPLLNK 420

Query: 421 ISKLGGKLSSASSVPELQLSQYVPALEKLATLRLLQQVSHVYQTMKIESLSQMIPFFDFS 480
           ISKLGGKLSSASSVPE+QLSQYVPALEKLATLRLLQQVS VYQTMKIESLSQMIP+FDFS
Sbjct: 421 ISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPYFDFS 480

Query: 481 AVEKILVDAVKQNFIAMKVDHSRNIVLFGNLGIESEGLRDHLTVLAESLNKVRAMIYPPV 540
           AVEKI VDAVKQNF+AMKVDHSRNIVLFGNLGIES+GLRDHLTVLAESLNK RAMIYPPV
Sbjct: 481 AVEKISVDAVKQNFVAMKVDHSRNIVLFGNLGIESDGLRDHLTVLAESLNKARAMIYPPV 540

Query: 541 KKTSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKIT 600
            K SKT +ILPDLADIVDKEHKRLLARKSIIEKRKEE ERQLLEMEREEES+RLKLLKIT
Sbjct: 541 GKASKTSDILPDLADIVDKEHKRLLARKSIIEKRKEELERQLLEMEREEESKRLKLLKIT 600

Query: 601 EEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLA EYEQRK+QRLRRE+EERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKL+
Sbjct: 601 EEAEQKRLAAEYEQRKNQRLRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLS 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLSKTMDYLERAKREEAATLIEAAFQQRLLEERTIH 720
           KQTLMQLALTEQLRERQEMEKKLQKL+KTMDYLERAKREEAA LIEA FQQRLLEER IH
Sbjct: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAEFQQRLLEERMIH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFNKRRAEREEHIRQ 780
           ER+QQLEVELSK RHEGDLKEKNR+ARMLESKK FQERVISLRQ+EF++RRAEREEHIRQ
Sbjct: 721 ERNQQLEVELSKHRHEGDLKEKNRMARMLESKKSFQERVISLRQDEFSRRRAEREEHIRQ 780

Query: 781 IIQSRKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAE 840
           IIQ+RKAEREA+RKKIFYVRREEERIRIL EEEEARKRE     + + A     L+ +  
Sbjct: 781 IIQARKAEREAQRKKIFYVRREEERIRILCEEEEARKREGDAPARPDVAPSSRPLEPVTA 840

Query: 841 KQRQRERELEEKERLRKEMLFSGGKSGDASARPDVSPASRPQESRTASPAAAAAAAAAPA 900
                                +   +  A+A    SPA                      
Sbjct: 841 ---------------------APAAAAAAAAAAATSPAK--------------------- 900

Query: 901 AGKYVPRFLRERTESSSPNAPPPESDRWGSSRPDNRPSQPGSWRNDDRRPAAFGSSRSSW 960
              YVP+F   R+E+S+P+APPPES RWGSSRPDNRPS+P SWRNDD R + FGSSR SW
Sbjct: 901 ---YVPKF--RRSEASNPDAPPPESGRWGSSRPDNRPSRPDSWRNDDSR-SGFGSSRPSW 917

Query: 961 SSSRV 966
           SSSRV
Sbjct: 961 SSSRV 917

[Close]

BLAST of Cp4.1LG04g08460 vs. TrEMBL
Match: M5WGG2_PRUPE (Eukaryotic translation initiation factor 3 subunit A OS=Prunus persica GN=PRUPE_ppa000928mg PE=3 SV=1)

HSP 1 Score: 1394.4 bits (3608), Expect = 0.0e+00
Identity = 786/973 (80.78%), Postives = 862/973 (88.59%), Query Frame = 1


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           M++F KPENALKRAEELINVGQKQDALQ+LHDLITSK+YRAWQKPLERIMFKYVELCVD+
Sbjct: 1   MSNFAKPENALKRAEELINVGQKQDALQSLHDLITSKRYRAWQKPLERIMFKYVELCVDL 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRI+CQQVNV+SLEEVIKHFMHLSTEKAEQAR+QAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRE+VTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDREVVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCK YKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLK+
Sbjct: 181 RAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKI 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATELELWQEAFRSVEDIHGLMCMVKKTPK SLMVVYY KLTEIFWIS S+L HAYAWLKL
Sbjct: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKASLMVVYYAKLTEIFWISASHLNHAYAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHEKERSLRMANLIGF 360
           F+LQKSFNKNLSQKDLQLIASSVVLAAL+V PYD    ASHLE E+EKER+LRMANLIGF
Sbjct: 301 FTLQKSFNKNLSQKDLQLIASSVVLAALSVAPYDQTRAASHLEFENEKERNLRMANLIGF 360

Query: 361 GLDSKLESRDVLSRENLLSELVSKGVLSCATQEIKDLYHLLEHEFFPLDLALKLQPLFTK 420
            L+ KL+  DVLSR +LLSELVSKGVLSCATQE+KDLYHLLEHEF PL+LA+K++PL TK
Sbjct: 361 NLEPKLDRGDVLSRSSLLSELVSKGVLSCATQEVKDLYHLLEHEFLPLNLAVKMEPLLTK 420

Query: 421 ISKLGGKLSSASSVPELQLSQYVPALEKLATLRLLQQVSHVYQTMKIESLSQMIPFFDFS 480
           ISK+GGKLSSASSVPE+QLSQYVPALEKL TLRLLQQVS VY T+KIE LS MIPF+DFS
Sbjct: 421 ISKVGGKLSSASSVPEVQLSQYVPALEKLGTLRLLQQVSQVYHTLKIECLSSMIPFYDFS 480

Query: 481 AVEKILVDAVKQNFIAMKVDHSRNIVLFGNLGIESEGLRDHLTVLAESLNKVRAMIYPPV 540
            VEKI VDAVK  FIAMKVDH + ++LFGNLG+ES+GLRDHLT LAESLN+ RA++YPP+
Sbjct: 481 VVEKIYVDAVKHKFIAMKVDHMKGVMLFGNLGLESDGLRDHLTNLAESLNEGRAIMYPPL 540

Query: 541 KKTSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKIT 600
           K  SK GEILP LAD VDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKL KIT
Sbjct: 541 KGASKLGEILPTLADTVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600

Query: 601 EEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLA EYEQRK+QR+ +E+EERELEEAQALLQEA  R   KKG +KP+L+ EK+T
Sbjct: 601 EEAEQKRLASEYEQRKNQRILKEIEERELEEAQALLQEARSR---KKG-KKPLLEGEKVT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLSKTMDYLERAKREEAATLIEAAFQQRLLEERTIH 720
           KQ+LM+LAL+EQLRERQEMEKKL KL++TMDYLERAKREE+A LIEAA+QQRL+EER +H
Sbjct: 661 KQSLMELALSEQLRERQEMEKKLLKLARTMDYLERAKREESAPLIEAAYQQRLVEERVLH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFNKRRAEREEHIRQ 780
           ER+QQLEVELS+QRHEGDLKEKNRLARMLE+K  FQERV+  RQ E+++R AEREE I Q
Sbjct: 721 ERNQQLEVELSQQRHEGDLKEKNRLARMLENKMSFQERVLHRRQSEYDRRTAEREEQISQ 780

Query: 781 IIQSRKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAE 840
           +IQ+RK EREAKRKKIFYVR EEER+R L EEEEARK EEAER+++EEAE +AKLDEIAE
Sbjct: 781 MIQARKHEREAKRKKIFYVRSEEERLRKLHEEEEARKHEEAERKRKEEAEYRAKLDEIAE 840

Query: 841 KQRQRERELEEKERLRKEMLFSGGKSGDASARPDVSPASRPQESRTASPAAAA---AAAA 900
           KQRQRERELEEKERLRKE L           RP   P  RP E R   PA AA   AAAA
Sbjct: 841 KQRQRERELEEKERLRKEALLG---------RPAELP--RPAEPRPVEPAVAAPAAAAAA 900

Query: 901 APAAGKYVPRFLRERTESSSPNAPPPESDRWGSSRPDNRPSQPGS-WRNDDRRPAAFGSS 960
           APA GKYVPRF R  TE ++  AP  + DR  +SRPD+RP      WR+D+RRP  FG S
Sbjct: 901 APAPGKYVPRFRRGGTEPAAQTAP--DLDR-RASRPDDRPPPSSDRWRSDERRPPTFGGS 955

Query: 961 RSSWSSSRVPARG 970
           +SSWSSSRVP+RG
Sbjct: 961 KSSWSSSRVPSRG 955

[Close]

BLAST of Cp4.1LG04g08460 vs. TrEMBL
Match: F6I4Q7_VITVI (Eukaryotic translation initiation factor 3 subunit A OS=Vitis vinifera GN=VIT_14s0060g01630 PE=3 SV=1)

HSP 1 Score: 1389.4 bits (3595), Expect = 0.0e+00
Identity = 787/981 (80.22%), Postives = 866/981 (88.28%), Query Frame = 1


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MA+F KPENALKRAEELINVGQKQDALQALHDLITSK+YRAWQK LERIMFKYVELCVDM
Sbjct: 1   MATFAKPENALKRAEELINVGQKQDALQALHDLITSKRYRAWQKTLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLE 120
           R+GRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQAR+QAQALEEALDVDDLE
Sbjct: 61  RRGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARNQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCK YKRTTEFRRLCEIIRNHL+NLNKYRDQRDRPDLSAPESLQLYLDTRFEQLK+
Sbjct: 181 RAFQFCKQYKRTTEFRRLCEIIRNHLSNLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKI 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATELELWQEAFRSVEDIHGLMCMVKKTPK SLMVVYY KLTEIFW+S S+LYHAYAW KL
Sbjct: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKASLMVVYYAKLTEIFWVSSSHLYHAYAWFKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHEKERSLRMANLIGF 360
           FSLQKSFNKNLSQKDLQLIASSVVLAAL+V PYD   GASHLELE+EKER+LRMANLIGF
Sbjct: 301 FSLQKSFNKNLSQKDLQLIASSVVLAALSVTPYDLTRGASHLELENEKERNLRMANLIGF 360

Query: 361 GLDSKLESRDVLSRENLLSELVSKGVLSCATQEIKDLYHLLEHEFFPLDLALKLQPLFTK 420
            L+ KL+ R+VLSR  LLSELVSKGV++C TQE+KDLYHLLEHEF PLDLA ++QPL  K
Sbjct: 361 NLEPKLDGREVLSRSALLSELVSKGVMTCVTQEVKDLYHLLEHEFLPLDLASRVQPLLAK 420

Query: 421 ISKLGGKLSSASSVPELQLSQYVPALEKLATLRLLQQVSHVYQTMKIESLSQMIPFFDFS 480
           ISKLGGKLSSASSV E+QLSQYVPALEKLATLRLLQQVS VYQTMKIESLS++I FFDFS
Sbjct: 421 ISKLGGKLSSASSVSEVQLSQYVPALEKLATLRLLQQVSQVYQTMKIESLSKVIQFFDFS 480

Query: 481 AVEKILVDAVKQNFIAMKVDHSRNIVLFGNLGIESEGLRDHLTVLAESLNKVRAMIYPPV 540
            VEKI VDAVK  FIAMKVDH + ++LFGNLG+ES+ +RDHLTV AE LNK RA+I+PP 
Sbjct: 481 VVEKISVDAVKHGFIAMKVDHMKGVILFGNLGLESDRMRDHLTVFAEFLNKARALIHPPA 540

Query: 541 KKTSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKIT 600
           KK SK G++L  LA+ VDKEHKRLLARKSIIEKRKEEQERQLLEMEREEES+RLKL KIT
Sbjct: 541 KKASKLGDMLSGLAETVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLKLQKIT 600

Query: 601 EEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLA EYEQRK+QR+ RE+EERELEEAQALLQEAEKR  KKKG +KP+ + EK+T
Sbjct: 601 EEAEQKRLASEYEQRKTQRILREIEERELEEAQALLQEAEKR-SKKKG-KKPIAEGEKVT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLSKTMDYLERAKREEAATLIEAAFQQRLLEERTIH 720
           KQ+LM+LAL+EQLRERQEMEKKLQKL+KTMDYLERAKREEAA LIEAAFQQRL+EE+  H
Sbjct: 661 KQSLMELALSEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAFQQRLVEEKAFH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFNKRRAEREEHIRQ 780
           E +QQ E+E+S+QRH+GDL+EKNRL RML+ K IFQERV++ RQ E+++ RAEREE I Q
Sbjct: 721 EHEQQQEIEVSRQRHDGDLREKNRLVRMLDKKMIFQERVMNRRQAEYSRLRAEREERISQ 780

Query: 781 IIQSRKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAE 840
           IIQSRK EREAKRK +FY+R EEER++  REEEEARKREEAERR++EEAER+AKLDEIAE
Sbjct: 781 IIQSRKQEREAKRKMLFYLRSEEERMKKAREEEEARKREEAERRRKEEAERRAKLDEIAE 840

Query: 841 KQRQRERELEEKERLRKEMLFSGGKSGDASARPDVSPAS-RPQESRTASPAAAAAAAAAP 900
           KQRQRERELEEKE+LR+E L   G+  +   +P   P   RP E  +A+PAAAAAAAA P
Sbjct: 841 KQRQRERELEEKEKLRREALL--GRPTEVPPKPSEPPTGGRPLEPGSAAPAAAAAAAA-P 900

Query: 901 AAGKYVPRFLRERTESSSPNAPPPESDRWGS------------SRPDNRPSQPGS-WRND 960
           A+GKYVP+F RER ES+   APPPE DRWGS            SR D+RP QP   WR D
Sbjct: 901 ASGKYVPKFRRERGESAV-QAPPPEPDRWGSRGAPNPESDRWGSRQDDRPPQPSDRWRRD 960

Query: 961 DRRPAAFGS---SRSS-WSSS 964
           D R ++FGS   SRSS WSSS
Sbjct: 961 D-RGSSFGSGGGSRSSTWSSS 974

[Close]

BLAST of Cp4.1LG04g08460 vs. TrEMBL
Match: U5GFL8_POPTR (Eukaryotic translation initiation factor 3 subunit A OS=Populus trichocarpa GN=POPTR_0005s02130g PE=3 SV=1)

HSP 1 Score: 1380.5 bits (3572), Expect = 0.0e+00
Identity = 777/989 (78.56%), Postives = 847/989 (85.64%), Query Frame = 1


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           M++F KPENALKRAEELINVGQKQDALQALHDLITSK+YRAWQKPLERIMFKYVELCVD+
Sbjct: 1   MSTFAKPENALKRAEELINVGQKQDALQALHDLITSKRYRAWQKPLERIMFKYVELCVDL 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLE 120
           R+GRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLE
Sbjct: 61  RRGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGK+RSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKERSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCK YKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDL+APESLQLYLDTRFEQLKV
Sbjct: 181 RAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLTAPESLQLYLDTRFEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATELELWQEAFRS+EDIHGLMCMVKKTPK SLMVVYY KLTEIFWIS S+LYHAYAWLKL
Sbjct: 241 ATELELWQEAFRSIEDIHGLMCMVKKTPKASLMVVYYAKLTEIFWISSSHLYHAYAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHEKERSLRMANLIGF 360
           F+LQKSFNKNLSQKDLQ+IASSVVLAALAV PYD   GASHLELE+EKER++RMANLIGF
Sbjct: 301 FTLQKSFNKNLSQKDLQIIASSVVLAALAVAPYDHTQGASHLELENEKERNMRMANLIGF 360

Query: 361 GLDSKLESRDVLSRENLLSELVSKGVLSCATQEIKDLYHLLEHEFFPLDLALKLQPLFTK 420
            LD K ESR+VLSR +LLSELVSKGV+SCATQE+KDLYHLLEHEF PLDL  K+QPL +K
Sbjct: 361 NLDLKPESREVLSRSSLLSELVSKGVMSCATQEVKDLYHLLEHEFLPLDLTAKVQPLLSK 420

Query: 421 ISKLGGKLSSASSVPELQLSQYVPALEKLATLRLLQQVSHVYQTMKIESLSQMIPFFDFS 480
           ISKLGGKL+SASSVPE+ LSQY+PALEKLATLRLLQQVS VYQTMKIESLSQMIPFFDFS
Sbjct: 421 ISKLGGKLTSASSVPEVHLSQYIPALEKLATLRLLQQVSQVYQTMKIESLSQMIPFFDFS 480

Query: 481 AVEKILVDAVKQNFIAMKVDHSRNIVLFGNLGIESEGLRDHLTVLAESLNKVRAMIYPPV 540
           AVEKI VDAVK NFIAMK+DH +++VLF    +ES+GLRDHLTV AESLNK RAMIYPP 
Sbjct: 481 AVEKISVDAVKHNFIAMKLDHMKHVVLFDTQDLESDGLRDHLTVFAESLNKARAMIYPPT 540

Query: 541 KKTSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKIT 600
           KK+SK GEILP L +IVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLK  KIT
Sbjct: 541 KKSSKLGEILPGLGEIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKQQKIT 600

Query: 601 EEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLA EYEQR  QR+ RE+EERELEEAQALL+E EKR  K+KG +KP+L+ EK+T
Sbjct: 601 EEAEQKRLAAEYEQRNKQRILREIEERELEEAQALLEEHEKR-SKRKGGKKPILEGEKVT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLSKTMDYLERAKREEAATLIEAAFQQRLLEERTIH 720
           KQ LM+ AL+EQLRERQEMEKKLQKL KTMDYLERAKREEAA LIEAAFQQRL+EE+ +H
Sbjct: 661 KQILMERALSEQLRERQEMEKKLQKLVKTMDYLERAKREEAAPLIEAAFQQRLVEEKALH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFNKRRAEREEHIRQ 780
           E +QQ E+ELS+QRH+GDL+EKNRL+RMLE+K IF+ERV S R+ EFN+RRAEREE I Q
Sbjct: 721 EHEQQQEIELSRQRHDGDLREKNRLSRMLENKIIFEERVKSRRESEFNQRRAEREERINQ 780

Query: 781 IIQSRKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAE 840
           I+Q+RK EREA RKKIF+VR EEER++ LREEEEARK EE ERR++EEAE KAKLD+IAE
Sbjct: 781 IVQARKQEREALRKKIFFVRSEEERLKRLREEEEARKHEEDERRRKEEAEHKAKLDKIAE 840

Query: 841 KQRQRERELEEKERLRKEMLFSGGKSGDASARPDVSPASRPQESRTASPAAAAAAAAAPA 900
           KQRQRERELEEKER+R+E L   G                P  S          AAAAPA
Sbjct: 841 KQRQRERELEEKERIRREALLVDG----------------PSRSSELPAGPEPGAAAAPA 900

Query: 901 AGKYVPRFLRERTESSSPNAP-------------PPESDRWGSSRPDNRPSQPGSW---- 960
           AGKYVPRF R  TE S+   P             PP+SD+W S      PS    W    
Sbjct: 901 AGKYVPRFRRGGTEGSAQAPPETDRWGGGSGRPAPPDSDKWSSGSARQPPSDTDRWGSGG 960

Query: 961 -RNDDRRPAA---FGSSRSSWSSSRVPAR 969
            R DDR P +    G S+S+WSSSR   R
Sbjct: 961 SRPDDRNPPSDRWGGGSKSTWSSSRPRGR 972

[Close]

BLAST of Cp4.1LG04g08460 vs. TAIR10
Match: AT4G11420.1 (AT4G11420.1 eukaryotic translation initiation factor 3A)

HSP 1 Score: 1278.8 bits (3308), Expect = 0.0e+00
Identity = 722/988 (73.08%), Postives = 832/988 (84.21%), Query Frame = 1


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MA+F KPENALKRA+ELINVGQKQDALQALHDLITSK+YRAWQKPLE+IMFKY++LCVD+
Sbjct: 1   MANFAKPENALKRADELINVGQKQDALQALHDLITSKRYRAWQKPLEKIMFKYLDLCVDL 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLE 120
           ++GRFAKDGLIQYRIVCQQVNV+SLEEVIKHF+HL+T+KAEQARSQA ALEEALDVDDLE
Sbjct: 61  KRGRFAKDGLIQYRIVCQQVNVSSLEEVIKHFLHLATDKAEQARSQADALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180
           AD++PEDL LS VSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH
Sbjct: 121 ADRKPEDLQLSIVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           +AFQFCK YKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRF+QLKV
Sbjct: 181 KAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFDQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATEL LWQEAFRSVEDI+GLMCMVKKTPK SL++VYY KLTEIFWIS S+LYHAYAW KL
Sbjct: 241 ATELGLWQEAFRSVEDIYGLMCMVKKTPKSSLLMVYYSKLTEIFWISSSHLYHAYAWFKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHEKERSLRMANLIGF 360
           FSLQK+FNKNLSQKDLQLIASSVVLAAL++PP+D    ASH+ELE+EKER+LRMANLIGF
Sbjct: 301 FSLQKNFNKNLSQKDLQLIASSVVLAALSIPPFDRAQSASHMELENEKERNLRMANLIGF 360

Query: 361 GLDSKLESRDVLSRENLLSELVSKGVLSCATQEIKDLYHLLEHEFFPLDLALKLQPLFTK 420
            L+ K E +D+LSR  LLSELVSKGVLSCA+QE+KDL+H+LEHEF PLDL  K+QPL  K
Sbjct: 361 NLEPKFEGKDMLSRSALLSELVSKGVLSCASQEVKDLFHVLEHEFHPLDLGSKIQPLLEK 420

Query: 421 ISKLGGKLSSASSVPELQLSQYVPALEKLATLRLLQQVSHVYQTMKIESLSQMIPFFDFS 480
           ISK GGKLSSA S+PE+QLSQYVP+LEKLATLRLLQQVS +YQT++IESLSQ++PFF FS
Sbjct: 421 ISKSGGKLSSAPSLPEVQLSQYVPSLEKLATLRLLQQVSKIYQTIRIESLSQLVPFFQFS 480

Query: 481 AVEKILVDAVKQNFIAMKVDHSRNIVLFGNLGIESEGLRDHLTVLAESLNKVRAMIYPPV 540
            VEKI VDAVK NF+AMKVDH + +V+FGNLGIES+GLRDHL V AESL+KVRAM+YP  
Sbjct: 481 EVEKISVDAVKNNFVAMKVDHMKGVVIFGNLGIESDGLRDHLAVFAESLSKVRAMLYPVP 540

Query: 541 KKTSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKIT 600
            K SK   ++P+LAD V+KEHKRLLARKSIIEKRKE+QERQ LEMEREEE +RLKL K+T
Sbjct: 541 SKASKLAGVIPNLADTVEKEHKRLLARKSIIEKRKEDQERQQLEMEREEEQKRLKLQKLT 600

Query: 601 EEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLA E  +R+ QR+ RE+EE+ELEEAQALL+E EKR+  KKG +KP+LD EK+T
Sbjct: 601 EEAEQKRLAAELAERRKQRILREIEEKELEEAQALLEETEKRM--KKGKKKPLLDGEKVT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLSKTMDYLERAKREEAATLIEAAFQQRLLEERTIH 720
           KQ++ + ALTEQL+ERQEMEKKLQKL+KTMDYLERAKREEAA LIEAA+Q+RL+EER  +
Sbjct: 661 KQSVKERALTEQLKERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQRRLVEEREFY 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFNKRRAEREEHIRQ 780
           ER+QQ EVELSK+RHE DLKEKNRL+RML +K+IFQ +VIS RQ EF++ R EREE I +
Sbjct: 721 EREQQREVELSKERHESDLKEKNRLSRMLGNKEIFQAQVISRRQAEFDRIRTEREERISK 780

Query: 781 IIQSRKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAE 840
           II+ +K ER+ KRK+I+Y++ EEERIR L+EEEEARK+EEAER K+ EAERKA LD+  E
Sbjct: 781 IIREKKQERDIKRKQIYYLKIEEERIRKLQEEEEARKQEEAERLKKVEAERKANLDKAFE 840

Query: 841 KQRQRERELEEKERLRKEMLFSGGKSGDAS-ARPDVSPASRPQESRTASPAAAAAAAAAP 900
           KQRQRE ELEEK R  +E L  G  +  A  A P V+P        T +PAAAAAAA AP
Sbjct: 841 KQRQREIELEEKSRREREELLRGTNAPPARLAEPTVTPVG------TTAPAAAAAAAGAP 900

Query: 901 AAGKYVPRFLRERTESSSPNA-------------PPPESDRWGSSRPDNRPSQPGSWRND 960
           AA  YVP++ R+ TE S P+A             PPP  D WGS+R        G+ +N 
Sbjct: 901 AA-PYVPKWKRQTTEVSGPSAPTSSETDRRSNRGPPPGDDHWGSNR--------GAAQNT 960

Query: 961 DRRPAAFGSSRSSWSSSR----VPARGG 971
           DR           W+S+R     PA GG
Sbjct: 961 DR-----------WTSNRERSGPPAEGG 960

[Close]

BLAST of Cp4.1LG04g08460 vs. TAIR10
Match: AT4G23330.1 (AT4G23330.1 BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1))

HSP 1 Score: 61.2 bits (147), Expect = 4.0e-09
Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 1


Query: 709 FQQRLLEERTIHERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFN 768
           +QQRLLEER I+E +QQ EVE    R + DLKEK RLARML++K+IF  RVI LRQ EF 
Sbjct: 206 YQQRLLEERKIYENEQQREVE----RLKSDLKEKKRLARMLDNKEIF--RVIRLRQPEFE 265

Query: 769 KRRAER 775
           + R+ER
Sbjct: 266 RLRSER 265

[Close]

BLAST of Cp4.1LG04g08460 vs. NCBI nr
Match: gi|778661939|ref|XP_011659071.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit A [Cucumis sativus])

HSP 1 Score: 1623.2 bits (4202), Expect = 0.0e+00
Identity = 895/973 (91.98%), Postives = 929/973 (95.48%), Query Frame = 1


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM
Sbjct: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQAR+QAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVL+ILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCK+YKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV
Sbjct: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL
Sbjct: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHEKERSLRMANLIGF 360
           FSLQKSFNKNLSQKDLQLIASSV+LAALAV PYDSKHGASHLELEHEKER+LRMANLIGF
Sbjct: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360

Query: 361 GLDSKLESRDVLSRENLLSELVSKGVLSCATQEIKDLYHLLEHEFFPLDLALKLQPLFTK 420
            LDSKLESRDVLSRENL SELVSKGVLSCATQE+KDLYHLLEHEFF LDLA KLQPL  K
Sbjct: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420

Query: 421 ISKLGGKLSSASSVPELQLSQYVPALEKLATLRLLQQVSHVYQTMKIESLSQMIPFFDFS 480
           +SKLGGKLSSASSVPE+QLSQYVPALEKLATLRLLQQVS VYQTMKIESLSQMIPFFDFS
Sbjct: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480

Query: 481 AVEKILVDAVKQNFIAMKVDHSRNIVLFGNLGIESEGLRDHLTVLAESLNKVRAMIYPPV 540
           AVEKI VDAVKQNFI MKVDHSRNIVLFGNLGIES+GLRDHLTV AESLNK RAMIYPPV
Sbjct: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540

Query: 541 KKTSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKIT 600
            K SKT +ILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKL KIT
Sbjct: 541 LKASKTSDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600

Query: 601 EEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLA EYEQRK+QR+RRE+EERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT
Sbjct: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLSKTMDYLERAKREEAATLIEAAFQQRLLEERTIH 720
           KQTLMQLALTEQLRERQEMEKKLQKL+KTMDYLERAKREEAATLIEAAFQQRLLEER IH
Sbjct: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFNKRRAEREEHIRQ 780
           ERDQQLEVELSKQRHEGDLKEKNRL+RM+ESKK FQERVISLRQEEF++RR EREEHIRQ
Sbjct: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780

Query: 781 IIQSRKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAE 840
           IIQ+RKAEREA+RKKIFYVRREEERIRILREEEEARKREEAERRK+EEAERKAKLDEIAE
Sbjct: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840

Query: 841 KQRQRERELEEKERLRKEMLFSGGKSGDASARPDVSPASRPQESRTASPAAAAAAAAAPA 900
           KQRQRERELEEKERLRKE LF   +SGDA ARPDV+P+S+P E  TA+PAAAAAAAAA +
Sbjct: 841 KQRQRERELEEKERLRKESLFGSARSGDAPARPDVAPSSQPLEPGTAAPAAAAAAAAATS 900

Query: 901 AGKYVPRFLRERTESSSPNAPPPESDRWGSSRPDNRPSQPGSWRNDDRRPAAFGSSRSSW 960
             KYVPRF   RTE+S+P+APPP+S RWG SRPDNRPS+P SWRNDD R +AFGSSR SW
Sbjct: 901 PAKYVPRF--RRTEASNPDAPPPDSGRWGGSRPDNRPSRPDSWRNDDSR-SAFGSSRPSW 960

Query: 961 SSSRVPARGGPER 974
           SSSR PAR   +R
Sbjct: 961 SSSRAPARASTDR 970

[Close]

BLAST of Cp4.1LG04g08460 vs. NCBI nr
Match: gi|659068630|ref|XP_008445419.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit A-like [Cucumis melo])

HSP 1 Score: 1615.5 bits (4182), Expect = 0.0e+00
Identity = 898/974 (92.20%), Postives = 930/974 (95.48%), Query Frame = 1


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM
Sbjct: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQAR+QAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVL+ILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCK+YKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV
Sbjct: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL
Sbjct: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHEKERSLRMANLIGF 360
           FSLQKSFNKNLSQKDLQLIASSV+LAALAV PYDSKHGASHLELEHEKER+LRMANLIGF
Sbjct: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360

Query: 361 GLDSKLESRDVLSRENLLSELVSKGVLSCATQEIKDLYHLLEHEFFPLDLALKLQPLFTK 420
            LDSKLESRDVLSRENL SELVSKGVLSCATQE+KDLYHLLEHE F LDLA KLQPL  K
Sbjct: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHESFHLDLATKLQPLLNK 420

Query: 421 ISKLGGKLSSASSVPELQLSQYVPALEKLATLRLLQQVSHVYQTMKIESLSQMIPFFDFS 480
           +SKLGGKLSSASSVPE+QLSQYVPALEKLATLRLLQQVS VYQTMKIESLSQMIPFFDFS
Sbjct: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480

Query: 481 AVEKILVDAVKQNFIAMKVDHSRNIVLFGNLGIESEGLRDHLTVLAESLNKVRAMIYPPV 540
           AVEKI VDAVKQNFI MK+DHSRNIVLFGNLGIES+GLRDHLTVLAESLNK RAMIYPPV
Sbjct: 481 AVEKISVDAVKQNFIGMKIDHSRNIVLFGNLGIESDGLRDHLTVLAESLNKARAMIYPPV 540

Query: 541 KKTSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKIT 600
            K SKTG++LPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKL KIT
Sbjct: 541 LKASKTGDLLPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600

Query: 601 EEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLA EYEQRK+QRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT
Sbjct: 601 EEAEQKRLAAEYEQRKNQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLSKTMDYLERAKREEAATLIEAAFQQRLLEERTIH 720
           KQTLMQLALTEQLRERQEMEKKLQKL+KTMDYLERAKREEAATLIEAAFQQRLLEER IH
Sbjct: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFNKRRAEREEHIRQ 780
           ERDQQLEVELSKQRHEGDLKEKNRL+RMLESKKIFQERVISLRQEEF++RRAEREEHI+Q
Sbjct: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMLESKKIFQERVISLRQEEFSRRRAEREEHIKQ 780

Query: 781 IIQSRKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAE 840
           IIQ+RKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRK+EEAERKAKLDEIAE
Sbjct: 781 IIQARKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840

Query: 841 KQRQRERELEEKERLRKEMLF-SGGKSGDASARPDVSPASRPQESRTASPAAAAAAAAAP 900
           KQRQRERELEEKERLRKE LF S  +SGDA ARPDV+P+SRP +  TA+PAAAAAAA +P
Sbjct: 841 KQRQRERELEEKERLRKESLFGSSARSGDAPARPDVAPSSRPLDPGTAAPAAAAAAATSP 900

Query: 901 AAGKYVPRFLRERTESSSPNAPPPESDRWGSSRPDNRPSQPGSWRNDDRRPAAFGSSRSS 960
           A  KYVP+F   R E S+P+APP ES RWGSSRPD RPS+P SWRNDD R +AFGSSR S
Sbjct: 901 A--KYVPKF--RRNEGSTPDAPPSESGRWGSSRPD-RPSRPDSWRNDDSR-SAFGSSRPS 960

Query: 961 WSSSRVPARGGPER 974
           WSSSR PAR   +R
Sbjct: 961 WSSSRAPARASTDR 968

[Close]

BLAST of Cp4.1LG04g08460 vs. NCBI nr
Match: gi|778661943|ref|XP_011659077.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit A-like [Cucumis sativus])

HSP 1 Score: 1592.8 bits (4123), Expect = 0.0e+00
Identity = 881/967 (91.11%), Postives = 920/967 (95.14%), Query Frame = 1


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           M SFVKPENALKRAEELINVGQKQDALQALHDLITS +YRAWQKPLERIMFKYVELCVDM
Sbjct: 1   MTSFVKPENALKRAEELINVGQKQDALQALHDLITSTRYRAWQKPLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHF+HLSTEKAEQARSQAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFLHLSTEKAEQARSQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCK+YKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTR EQLKV
Sbjct: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRIEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATEL+LWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISD+NLYHA+AWLKL
Sbjct: 241 ATELKLWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDNNLYHAHAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHEKERSLRMANLIGF 360
           FS+QKSFNKNLSQKDLQLIASSV+LAALAV PYDSKHGASHLELEHEKER+LRMANLIGF
Sbjct: 301 FSIQKSFNKNLSQKDLQLIASSVILAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360

Query: 361 GLDSKLESRDVLSRENLLSELVSKGVLSCATQEIKDLYHLLEHEFFPLDLALKLQPLFTK 420
            LDSKLESRDVLSR NLLSELVSKGVLSC  QE+KDLYHLLEHEFFPLDLA KLQPL  K
Sbjct: 361 SLDSKLESRDVLSRANLLSELVSKGVLSCTIQEVKDLYHLLEHEFFPLDLATKLQPLLNK 420

Query: 421 ISKLGGKLSSASSVPELQLSQYVPALEKLATLRLLQQVSHVYQTMKIESLSQMIPFFDFS 480
           ISKLGGKLSSASSVPE+QLSQYVPALEKLATLRLLQQVS VYQTMKIESLSQMIP+FDFS
Sbjct: 421 ISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPYFDFS 480

Query: 481 AVEKILVDAVKQNFIAMKVDHSRNIVLFGNLGIESEGLRDHLTVLAESLNKVRAMIYPPV 540
           AVEKI VDAVKQNF+AMKVDHSRNIVLFGNLGIES+GLRDHLTVLAESLNK RAMIYPPV
Sbjct: 481 AVEKISVDAVKQNFVAMKVDHSRNIVLFGNLGIESDGLRDHLTVLAESLNKARAMIYPPV 540

Query: 541 KKTSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKIT 600
            K SKT +ILPDLADIVDKEHKRLLARKSIIEKRKEE ERQLLEMEREEES+RLKLLKIT
Sbjct: 541 GKASKTSDILPDLADIVDKEHKRLLARKSIIEKRKEELERQLLEMEREEESKRLKLLKIT 600

Query: 601 EEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLA EYEQRK+QRLRRE+EERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKL+
Sbjct: 601 EEAEQKRLAAEYEQRKNQRLRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLS 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLSKTMDYLERAKREEAATLIEAAFQQRLLEERTIH 720
           KQTLMQLALTEQLRERQEMEKKLQKL+KTMDYLERAKREEAA LIEA FQQRLLEER IH
Sbjct: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAEFQQRLLEERMIH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFNKRRAEREEHIRQ 780
           ER+QQLEVELSK RHEGDLKEKNR+ARMLESKK FQERVISLRQ+EF++RRAEREEHIRQ
Sbjct: 721 ERNQQLEVELSKHRHEGDLKEKNRMARMLESKKSFQERVISLRQDEFSRRRAEREEHIRQ 780

Query: 781 IIQSRKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAE 840
           IIQ+RKAEREA+RKKIFYVRREEERIRIL EEEEARKREEAERRK+EEAERKAKLDEIAE
Sbjct: 781 IIQARKAEREAQRKKIFYVRREEERIRILCEEEEARKREEAERRKKEEAERKAKLDEIAE 840

Query: 841 KQRQRERELEEKERLRKEMLFSGGKSGDASARPDVSPASRPQESRTASPAAAAAAAAAPA 900
           KQRQRERELEEKERLRKE LF   +SGDA ARPDV+P+SRP E  TA+PAAAAAAAAA A
Sbjct: 841 KQRQRERELEEKERLRKESLFGSARSGDAPARPDVAPSSRPLEPVTAAPAAAAAAAAAAA 900

Query: 901 A--GKYVPRFLRERTESSSPNAPPPESDRWGSSRPDNRPSQPGSWRNDDRRPAAFGSSRS 960
               KYVP+F   R+E+S+P+APPPES RWGSSRPDNRPS+P SWRNDD R + FGSSR 
Sbjct: 901 TSPAKYVPKF--RRSEASNPDAPPPESGRWGSSRPDNRPSRPDSWRNDDSR-SGFGSSRP 960

Query: 961 SWSSSRV 966
           SWSSSRV
Sbjct: 961 SWSSSRV 964

[Close]

BLAST of Cp4.1LG04g08460 vs. NCBI nr
Match: gi|659068626|ref|XP_008445392.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit A-like [Cucumis melo])

HSP 1 Score: 1539.6 bits (3985), Expect = 0.0e+00
Identity = 859/972 (88.37%), Postives = 903/972 (92.90%), Query Frame = 1


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           M SFVKPENALKRAEELINVGQKQDALQALHDLITSK+YRAWQKPLE+IMFKYVELCVDM
Sbjct: 1   MTSFVKPENALKRAEELINVGQKQDALQALHDLITSKRYRAWQKPLEKIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQAR+QAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCK+YKRTTEFRRLCEIIRNHLANLNK+RDQRDRPDLSAPESLQLYLDTR EQLKV
Sbjct: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKFRDQRDRPDLSAPESLQLYLDTRIEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFW SDSNLYHAYAWLKL
Sbjct: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWKSDSNLYHAYAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHEKERSLRMANLIGF 360
           FS+QKSFNKNLSQKDLQLIASSV+LAALAV PYDSKH ASHLELEHEKER+LR+ANLIGF
Sbjct: 301 FSIQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHSASHLELEHEKERNLRIANLIGF 360

Query: 361 GLDSKLESRDVLSRENLLSELVSKGVLSCATQEIKDLYHLLEHEFFPLDLALKLQPLFTK 420
            LDSKLESRDVLSR NLLSELVSKGVLSCA QE+KDLYHLLEHE F LDLA+KLQPL  K
Sbjct: 361 NLDSKLESRDVLSRANLLSELVSKGVLSCAIQEVKDLYHLLEHELFSLDLAIKLQPLLDK 420

Query: 421 ISKLGGKLSSASSVPELQLSQYVPALEKLATLRLLQQVSHVYQTMKIESLSQMIPFFDFS 480
           ISKLGGKLSSASSVPE+QLS+YVPALEKLATLRLLQQVS VYQTMKIESL QMIPFF FS
Sbjct: 421 ISKLGGKLSSASSVPEVQLSKYVPALEKLATLRLLQQVSKVYQTMKIESLLQMIPFFYFS 480

Query: 481 AVEKILVDAVKQNFIAMKVDHSRNIVLFGNLGIESEGLRDHLTVLAESLNKVRAMIYPPV 540
           AVEKI VDAVKQNFIAMKVDHSRNIVLFG+LGIES+ LRDHLTVLAESLNK RAMIYPPV
Sbjct: 481 AVEKISVDAVKQNFIAMKVDHSRNIVLFGDLGIESDELRDHLTVLAESLNKARAMIYPPV 540

Query: 541 KKTSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKIT 600
           +K+SK G+ILPDLADIVDKEH+RLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKIT
Sbjct: 541 RKSSKIGDILPDLADIVDKEHRRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKIT 600

Query: 601 EEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLA EYEQRK+QRLRRE+EERELEEAQALLQEAEKRVGKKKGS+KPVLDSEKL+
Sbjct: 601 EEAEQKRLAAEYEQRKNQRLRREIEERELEEAQALLQEAEKRVGKKKGSKKPVLDSEKLS 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLSKTMDYLERAKREEAATLIEAAFQQRLLEERTIH 720
           KQ LMQLALTEQLRERQEMEKKLQKL+KTMDYLERAKREEAA           +   T+ 
Sbjct: 661 KQALMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPXXXXXXXWEFVLSSTVV 720

Query: 721 ERDQ-------QLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFNKRRAE 780
           E          QLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVI LR+EE ++RRAE
Sbjct: 721 ETRMETFFSSFQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVIGLRREESSRRRAE 780

Query: 781 REEHIRQIIQSRKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKA 840
           REEHIRQII++RKAERE KRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKA
Sbjct: 781 REEHIRQIIEARKAEREGKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKA 840

Query: 841 KLDEIAEKQRQRERELEEKERLRKEMLFSGGKSGDASARPDVSPASRPQESRTASPAAAA 900
           KLDEIAEKQRQRERELEEKERLRK+ LF   +  DA ARPDV+P+SRP +S TA+PAAAA
Sbjct: 841 KLDEIAEKQRQRERELEEKERLRKQSLFGAARLADAPARPDVAPSSRPLDSGTAAPAAAA 900

Query: 901 AAAAAPAAGKYVPRFLRERTESSSPNAPPPESDRWGSSRPDNRPSQPGSWRNDDRRPAAF 960
           AAA +PA  KYVP+F   R+E S+PNAPPPESDRWG +RPDNRPSQP SWR+DDRRP AF
Sbjct: 901 AAAPSPA--KYVPKF--RRSEGSTPNAPPPESDRWGGNRPDNRPSQPDSWRSDDRRP-AF 960

Query: 961 GSSRSSWSSSRV 966
           GSSR+ WSSSRV
Sbjct: 961 GSSRALWSSSRV 967

[Close]

BLAST of Cp4.1LG04g08460 vs. NCBI nr
Match: gi|659068628|ref|XP_008445406.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit A-like [Cucumis melo])

HSP 1 Score: 1518.1 bits (3929), Expect = 0.0e+00
Identity = 855/966 (88.51%), Postives = 887/966 (91.82%), Query Frame = 1


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           M SFVKPENALKRAEELINVGQKQDALQALHDLITSK+YRAWQKPLERIMFKYVELCVDM
Sbjct: 1   MTSFVKPENALKRAEELINVGQKQDALQALHDLITSKRYRAWQKPLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHF+HLSTEKAEQARSQAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFLHLSTEKAEQARSQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKLYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCK+YKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV
Sbjct: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAW KL
Sbjct: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWFKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVVLAALAVPPYDSKHGASHLELEHEKERSLRMANLIGF 360
           FS+QKSFNKNLSQKDLQLIASSV+LAALAV PYDSKHGASHLELEHEKER+LRMANLIGF
Sbjct: 301 FSIQKSFNKNLSQKDLQLIASSVILAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360

Query: 361 GLDSKLESRDVLSRENLLSELVSKGVLSCATQEIKDLYHLLEHEFFPLDLALKLQPLFTK 420
            LDSKLESRDVLSR NLLSELVSKGVLSC  QE+KDLYHLLEHEFFPLDLA KLQPL  K
Sbjct: 361 SLDSKLESRDVLSRANLLSELVSKGVLSCTIQEVKDLYHLLEHEFFPLDLATKLQPLLNK 420

Query: 421 ISKLGGKLSSASSVPELQLSQYVPALEKLATLRLLQQVSHVYQTMKIESLSQMIPFFDFS 480
           ISKLGGKLSSASSVPE+QLSQYVPALEKLATLRLLQQVS VYQTMKIESLSQMIPFFDFS
Sbjct: 421 ISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480

Query: 481 AVEKILVDAVKQNFIAMKVDHSRNIVLFGNLGIESEGLRDHLTVLAESLNKVRAMIYPPV 540
           AVEKI VDAVKQNFIAMKVDHSRNIVLFGNL                 LN     ++P  
Sbjct: 481 AVEKISVDAVKQNFIAMKVDHSRNIVLFGNL----------------VLNFFPIFLFPFF 540

Query: 541 KKTSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKIT 600
              +K      DLADIVDKEHKRLLARKSIIEKRKEE ERQLLEMEREEESRRLKLLKIT
Sbjct: 541 SFCTKXXXXXXDLADIVDKEHKRLLARKSIIEKRKEELERQLLEMEREEESRRLKLLKIT 600

Query: 601 EEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLA EYEQRK+QRLRRE+EERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKL+
Sbjct: 601 EEAEQKRLAAEYEQRKNQRLRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLS 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLSKTMDYLERAKREEAATLIEAAFQQRLLEERTIH 720
           KQTLMQLALTEQLRERQEMEKKLQKL+KTMDYLERAKREEAA LIE  FQQRLLEER IH
Sbjct: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEEEFQQRLLEERMIH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFNKRRAEREEHIRQ 780
           ER+QQLEVELSKQRHEGDLKEKNR+ARMLESKK FQERVISLRQEEF++RR EREEHIRQ
Sbjct: 721 ERNQQLEVELSKQRHEGDLKEKNRMARMLESKKSFQERVISLRQEEFSRRRTEREEHIRQ 780

Query: 781 IIQSRKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAE 840
           IIQ+RKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRK+EEAERKAKLDEIAE
Sbjct: 781 IIQARKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840

Query: 841 KQRQRERELEEKERLRKEMLF-SGGKSGDASARPDVSPASRPQESRTASPAAAAAAAAAP 900
           KQRQRERELEEKERLRKE LF S  +SGDA ARPDV+P+SRP + RTA+PAAAA + A  
Sbjct: 841 KQRQRERELEEKERLRKESLFGSSARSGDAPARPDVAPSSRPLDPRTAAPAAAATSPA-- 900

Query: 901 AAGKYVPRFLRERTESSSPNAPPPESDRWGSSRPDNRPSQPGSWRNDDRRPAAFGSSRSS 960
              KYVP+F   R E S+P+AP  ES RWGSSRPDNRPS+P SWRNDD R +AFGSSR S
Sbjct: 901 ---KYVPKF--RRNEGSTPDAPLSESGRWGSSRPDNRPSRPDSWRNDDSR-SAFGSSRPS 942

Query: 961 WSSSRV 966
           WSSSRV
Sbjct: 961 WSSSRV 942

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g08460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EIF3A_ARATH	0.0e+00	73.08	Eukaryotic translation initiation factor 3 subunit A OS=Arabidopsis thaliana GN=...	[more]
EIF3A_TOBAC	0.0e+00	74.28	Eukaryotic translation initiation factor 3 subunit A OS=Nicotiana tabacum GN=TIF...	[more]
EIF3A_MAIZE	0.0e+00	68.10	Eukaryotic translation initiation factor 3 subunit A OS=Zea mays GN=TIF3A1 PE=2 ...	[more]
EIF3A_DANRE	2.6e-135	37.04	Eukaryotic translation initiation factor 3 subunit A OS=Danio rerio GN=eif3a PE=...	[more]
EIF3A_HUMAN	1.9e-133	35.93	Eukaryotic translation initiation factor 3 subunit A OS=Homo sapiens GN=EIF3A PE...	[more]

BLAST of Cp4.1LG04g08460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVH6_CUCSA	0.0e+00	85.92	Eukaryotic translation initiation factor 3 subunit A OS=Cucumis sativus GN=Csa_1...	[more]
A0A0A0M147_CUCSA	0.0e+00	84.97	Eukaryotic translation initiation factor 3 subunit A OS=Cucumis sativus GN=Csa_1...	[more]
M5WGG2_PRUPE	0.0e+00	80.78	Eukaryotic translation initiation factor 3 subunit A OS=Prunus persica GN=PRUPE_...	[more]
F6I4Q7_VITVI	0.0e+00	80.22	Eukaryotic translation initiation factor 3 subunit A OS=Vitis vinifera GN=VIT_14...	[more]
U5GFL8_POPTR	0.0e+00	78.56	Eukaryotic translation initiation factor 3 subunit A OS=Populus trichocarpa GN=P...	[more]

BLAST of Cp4.1LG04g08460 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G11420.1	0.0e+00	73.08	eukaryotic translation initiation factor 3A	[more]
AT4G23330.1	4.0e-09	62.12	BEST Arabidopsis thaliana protein match is: eukaryotic translation i...	[more]

BLAST of Cp4.1LG04g08460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778661939\|ref\|XP_011659071.1\|	0.0e+00	91.98	PREDICTED: eukaryotic translation initiation factor 3 subunit A [Cucumis sativus...	[more]
gi\|659068630\|ref\|XP_008445419.1\|	0.0e+00	92.20	PREDICTED: eukaryotic translation initiation factor 3 subunit A-like [Cucumis me...	[more]
gi\|778661943\|ref\|XP_011659077.1\|	0.0e+00	91.11	PREDICTED: eukaryotic translation initiation factor 3 subunit A-like [Cucumis sa...	[more]
gi\|659068626\|ref\|XP_008445392.1\|	0.0e+00	88.37	PREDICTED: eukaryotic translation initiation factor 3 subunit A-like [Cucumis me...	[more]
gi\|659068628\|ref\|XP_008445406.1\|	0.0e+00	88.51	PREDICTED: eukaryotic translation initiation factor 3 subunit A-like [Cucumis me...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005852	eukaryotic translation initiation factor 3 complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027512	EIF3A
IPR011991	Winged helix-turn-helix DNA-binding domain
IPR000717	PCI_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001731	formation of translation preinitiation complex
biological_process	GO:0006446	regulation of translational initiation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003743	translation initiation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g08460.1	Cp4.1LG04g08460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 373..509 score: 8.5
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 441..532 score: 3.
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	G3DSA:1.10.10.10		coord: 453..508 score: 7.
IPR027512	Eukaryotic translation initiation factor 3 subunit A	HAMAP	MF_03000	eIF3a	coord: 1..960 score: 27
None	No IPR available	unknown	Coil	Coil	coord: 732..752 score: -coord: 610..649 score: -coord: 669..699 score: -coord: 93..120 score: -coord: 561..600 score: -coord: 799..858 scor
None	No IPR available	PANTHER	PTHR14005	EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT	coord: 1..970 score:
None	No IPR available	SMART	SM00753	PINT	coord: 441..532 score: 3.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG04g08460	CmaCh11G012480	Cucurbita maxima (Rimu)	cmacpeB150
Cp4.1LG04g08460	CmaCh10G011470	Cucurbita maxima (Rimu)	cmacpeB097
Cp4.1LG04g08460	CmoCh11G013030	Cucurbita moschata (Rifu)	cmocpeB126
Cp4.1LG04g08460	CmoCh10G012310	Cucurbita moschata (Rifu)	cmocpeB073
Cp4.1LG04g08460	Cla005173	Watermelon (97103) v1	cpewmB645
Cp4.1LG04g08460	ClCG03G017600	Watermelon (Charleston Gray)	cpewcgB601
Cp4.1LG04g08460	Lsi06G000690	Bottle gourd (USVL1VR-Ls)	cpelsiB570

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG04g08460	Cp4.1LG18g00300	Cucurbita pepo (Zucchini)	cpecpeB368

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG04g08460	Cucurbita maxima (Rimu)	cmacpeB091
Cp4.1LG04g08460	Cucurbita moschata (Rifu)	cmocpeB067
Cp4.1LG04g08460	Wild cucumber (PI 183967)	cpecpiB654
Cp4.1LG04g08460	Bottle gourd (USVL1VR-Ls)	cpelsiB560
Cp4.1LG04g08460	Melon (DHL92) v3.6.1	cpemedB745
Cp4.1LG04g08460	Cucumber (Chinese Long) v3	cpecucB0807
Cp4.1LG04g08460	Wax gourd	cpewgoB0893
Cp4.1LG04g08460	Wax gourd	cpewgoB0905