Cp4.1LG04g07480 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g07480
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionpathogenesis-related gene 1
LocationCp4.1LG04 : 4106885 .. 4107373 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTATTCAAGATTTTCTTCGCTCTCATTTGCGTTTCGGGATTGTTTTTAGTTAAGCCATCTCTCGCTCAAAACTCACCTAAGGACTATCTCAATGCCCACAATGCAGCTCGCAAAATGGTTGGCGTTGGACCATTGTTTTGGGACCGAAAACTAGCAGCCTATGCTCAAAGCTATGCTAATAAACGCATGCGTGACTGTAAGCTAGTGCTCTCGGGTGGCCCGTATGGCGAGAACCTTGCATGGAGTAGCGATCGTAGCCTCACAGGCGTCGGGGCAGTGAAGCTATGGGTTAGCAAGAAGGGATTCTACAATTACAGGTCCAATAAATGTGTTGGTGATCAGAGTTGTCTAGCATACACTCAGGTGGTTTGGAGACGTTCGAAGAAGCTGGGATGTGCTAGAGTTAAGTGCACCAATGGTGGTACTTTTGTGATTTGCAGCTACAGCCCTCGAGGCAACATTTCTTCTCAACGGCCATATTAA

mRNA sequence

ATGGATGTATTCAAGATTTTCTTCGCTCTCATTTGCGTTTCGGGATTGTTTTTAGTTAAGCCATCTCTCGCTCAAAACTCACCTAAGGACTATCTCAATGCCCACAATGCAGCTCGCAAAATGGTTGGCGTTGGACCATTGTTTTGGGACCGAAAACTAGCAGCCTATGCTCAAAGCTATGCTAATAAACGCATGCGTGACTGTAAGCTAGTGCTCTCGGGTGGCCCGTATGGCGAGAACCTTGCATGGAGTAGCGATCGTAGCCTCACAGGCGTCGGGGCAGTGAAGCTATGGGTTAGCAAGAAGGGATTCTACAATTACAGGTCCAATAAATGTGTTGGTGATCAGAGTTGTCTAGCATACACTCAGGTGGTTTGGAGACGTTCGAAGAAGCTGGGATGTGCTAGAGTTAAGTGCACCAATGGTGGTACTTTTGTGATTTGCAGCTACAGCCCTCGAGGCAACATTTCTTCTCAACGGCCATATTAA

Coding sequence (CDS)

ATGGATGTATTCAAGATTTTCTTCGCTCTCATTTGCGTTTCGGGATTGTTTTTAGTTAAGCCATCTCTCGCTCAAAACTCACCTAAGGACTATCTCAATGCCCACAATGCAGCTCGCAAAATGGTTGGCGTTGGACCATTGTTTTGGGACCGAAAACTAGCAGCCTATGCTCAAAGCTATGCTAATAAACGCATGCGTGACTGTAAGCTAGTGCTCTCGGGTGGCCCGTATGGCGAGAACCTTGCATGGAGTAGCGATCGTAGCCTCACAGGCGTCGGGGCAGTGAAGCTATGGGTTAGCAAGAAGGGATTCTACAATTACAGGTCCAATAAATGTGTTGGTGATCAGAGTTGTCTAGCATACACTCAGGTGGTTTGGAGACGTTCGAAGAAGCTGGGATGTGCTAGAGTTAAGTGCACCAATGGTGGTACTTTTGTGATTTGCAGCTACAGCCCTCGAGGCAACATTTCTTCTCAACGGCCATATTAA

Protein sequence

MDVFKIFFALICVSGLFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSYANKRMRDCKLVLSGGPYGENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLAYTQVVWRRSKKLGCARVKCTNGGTFVICSYSPRGNISSQRPY
Homology
[Close]
BLAST of Cp4.1LG04g07480 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-46
Identity = 88/157 (56.05%), Postives = 113/157 (71.97%), Query Frame = 1 

Query: 6   IFFALICVSGLFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSYANKRM 65
           +F AL+      LV PS AQ+SP+DYL  HN AR  VGVGP+ WD ++AAYA+SYA +  
Sbjct: 12  VFVALVGA----LVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLR 71

Query: 66  RDCKLVLSGGPYGENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLAYTQVV 125
            +C+L+ SGGPYGENLAW S   L+GV AV +WVS+K  YNY +N C G   C  YTQVV
Sbjct: 72  GNCRLIHSGGPYGENLAWGSG-DLSGVSAVNMWVSEKANYNYAANTCNG--VCGHYTQVV 131

Query: 126 WRRSKKLGCARVKCTNGGTFVICSYSPRGNISSQRPY 163
           WR+S +LGCA+V+C NGGT + C+Y PRGN  +++PY
Sbjct: 132 WRKSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]
BLAST of Cp4.1LG04g07480 vs. Swiss-Prot
Match: PR1_SAMNI (Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.9e-46
Identity = 85/155 (54.84%), Postives = 110/155 (70.97%), Query Frame = 1 

Query: 9   ALICVSGLFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSYANKRMRDC 68
           AL+CV  L +V+ S+AQNSP+DY++AHNAAR  V VGP+ WD  +AA+A+ YA  R  DC
Sbjct: 13  ALVCVVALVMVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAGDC 72

Query: 69  KLVLSGGP-YGENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLAYTQVVWR 128
           +LV SG P YGENLA+ S   LTG  AV +WV+++  YN  +N C   + C  YTQVVWR
Sbjct: 73  RLVHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVWR 132

Query: 129 RSKKLGCARVKCTNGGTFVICSYSPRGNISSQRPY 163
            S ++GCARV+C NG  F+ C+YSP GN + QRPY
Sbjct: 133 NSVRIGCARVRCNNGAWFITCNYSPPGNYAGQRPY 167

[Close]
BLAST of Cp4.1LG04g07480 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.4e-46
Identity = 86/145 (59.31%), Postives = 106/145 (73.10%), Query Frame = 1 

Query: 18  LVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSYANKRMRDCKLVLSGGPY 77
           L+  S AQNSP+DYLN HNAAR+ VGVGP+ WD +LAAYAQ+YAN+R+ DC ++ S GPY
Sbjct: 17  LIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPY 76

Query: 78  GENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLAYTQVVWRRSKKLGCARV 137
           GENLA ++   L   GAVK+WV +K FY+Y SN CVG   C  YTQVVWR S +LGCARV
Sbjct: 77  GENLA-AAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGG-VCGHYTQVVWRNSVRLGCARV 136

Query: 138 KCTNGGTFVICSYSPRGNISSQRPY 163
           +  NG  F+ C+Y P GN   QRP+
Sbjct: 137 RSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]
BLAST of Cp4.1LG04g07480 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.0e-44
Identity = 84/145 (57.93%), Postives = 105/145 (72.41%), Query Frame = 1 

Query: 18  LVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSYANKRMRDCKLVLSGGPY 77
           LV P  AQ+S +DY+NAHN AR  +GVGP+ WD  LAAYA++YAN+   DC+LV S GPY
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPY 79

Query: 78  GENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLAYTQVVWRRSKKLGCARV 137
           GENLA  S   L+GV AV LWV++K  YNY +N C G   C  YTQVVWR S +LGCA+V
Sbjct: 80  GENLA-KSGGDLSGVAAVNLWVNEKANYNYDTNTCNG--VCGHYTQVVWRNSVRLGCAKV 139

Query: 138 KCTNGGTFVICSYSPRGNISSQRPY 163
           +C NGGT + C+Y P GN ++Q+PY
Sbjct: 140 RCNNGGTIISCNYDPPGNYANQKPY 161

[Close]
BLAST of Cp4.1LG04g07480 vs. Swiss-Prot
Match: PR12_HORVU (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-42
Identity = 84/164 (51.22%), Postives = 103/164 (62.80%), Query Frame = 1 

Query: 1   MDVFKIFFALICVSGLFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSY 60
           M   K+   L       +V  S AQNSP+DY++ HNAAR  VGVG + W  KL A+AQ+Y
Sbjct: 1   MQTPKLAILLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNY 60

Query: 61  ANKRMRDCKLVLSGGPYGENLAW-SSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCL 120
           AN+R+ DCKL  SGGPYGEN+ W S+        AV  WV++K  YNY SN C   + C 
Sbjct: 61  ANQRINDCKLQHSGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCG 120

Query: 121 AYTQVVWRRSKKLGCARVKCTNG-GTFVICSYSPRGNISSQRPY 163
            YTQVVWR S  +GCARV C N  G F+ C+Y PRGNI  Q+PY
Sbjct: 121 HYTQVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]
BLAST of Cp4.1LG04g07480 vs. TrEMBL
Match: A0A0D2TX10_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G044000 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.7e-52
Identity = 95/154 (61.69%), Postives = 116/154 (75.32%), Query Frame = 1 

Query: 9   ALICVSGLFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSYANKRMRDC 68
           AL C+ GL LV PS AQ+S +DYLNAHN AR  VGVGP+ WD  +AAYA++YA +R+ DC
Sbjct: 10  ALTCLVGLVLVLPSHAQDSQQDYLNAHNTARAAVGVGPMTWDNTVAAYAENYAKQRIADC 69

Query: 69  KLVLSGGPYGENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLAYTQVVWRR 128
            LV SGGPYGEN+AW S   L+G  AV +WV++K  YNY SN+C   + C  YTQVVWR 
Sbjct: 70  NLVHSGGPYGENIAWGS-ADLSGTDAVNMWVNEKANYNYNSNRCAAGKVCGHYTQVVWRN 129

Query: 129 SKKLGCARVKCTNGGTFVICSYSPRGNISSQRPY 163
           S  LGCA+VKC NGGTF++C+YSPRGNI  Q+PY
Sbjct: 130 SVHLGCAKVKCNNGGTFIVCNYSPRGNIVGQKPY 162

[Close]
BLAST of Cp4.1LG04g07480 vs. TrEMBL
Match: A5BNW5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00810 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 7.9e-52
Identity = 100/154 (64.94%), Postives = 113/154 (73.38%), Query Frame = 1 

Query: 9   ALICVSGLFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSYANKRMRDC 68
           AL+C  GL L     AQNSP+DYLNAHN AR  VGVGP+ WD  +AAYAQ+YAN+R+ DC
Sbjct: 9   ALLCFMGLALAHICCAQNSPQDYLNAHNTARAQVGVGPMSWDNTVAAYAQNYANQRIGDC 68

Query: 69  KLVLSGGPYGENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLAYTQVVWRR 128
            LV SGGPYGENLAW S  SLTG  AV LWV +K  Y+Y SN CVG Q C  YTQVVW +
Sbjct: 69  NLVHSGGPYGENLAWGSP-SLTGTDAVNLWVGEKSNYDYNSNSCVGGQ-CGHYTQVVWSK 128

Query: 129 SKKLGCARVKCTNGGTFVICSYSPRGNISSQRPY 163
           S +LGCARV+C NGG FV C+Y PRGN   QRPY
Sbjct: 129 SVRLGCARVQCNNGGWFVTCNYDPRGNYIGQRPY 160

[Close]
BLAST of Cp4.1LG04g07480 vs. TrEMBL
Match: B9S7U9_RICCO (STS14 protein, putative OS=Ricinus communis GN=RCOM_1381930 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.3e-51
Identity = 97/158 (61.39%), Postives = 116/158 (73.42%), Query Frame = 1 

Query: 5   KIFFALICVSGLFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSYANKR 64
           KI  AL  +  L L+  S AQN P+DY+NAHNAAR  VGVGP+ WD  +AAYAQ+YAN+R
Sbjct: 5   KISAALSFLISLSLILSSHAQNLPQDYINAHNAARAAVGVGPMTWDNTVAAYAQNYANQR 64

Query: 65  MRDCKLVLSGGPYGENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLAYTQV 124
           + DC+LV SGG YGEN+AWSS   L+G  AVKLWV +K FYNY SN C   Q C  YTQV
Sbjct: 65  INDCRLVHSGGRYGENIAWSSG-DLSGTAAVKLWVDEKAFYNYNSNTCAAGQQCGHYTQV 124

Query: 125 VWRRSKKLGCARVKCTNGGTFVICSYSPRGNISSQRPY 163
           VWR S +LGCA+V+C NGGTF+ C+Y P GN  +QRPY
Sbjct: 125 VWRNSVRLGCAKVRCRNGGTFITCNYDPPGNFVNQRPY 161

[Close]
BLAST of Cp4.1LG04g07480 vs. TrEMBL
Match: A9CSN7_9ROSI (Putative pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=Tam-PR1 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.0e-51
Identity = 98/154 (63.64%), Postives = 112/154 (72.73%), Query Frame = 1 

Query: 9   ALICVSGLFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSYANKRMRDC 68
           AL+C  GL L     AQNSP+DYLNAHN AR  VGVGP+ WD  +AAYAQ+YAN+R+ DC
Sbjct: 9   ALLCFMGLALAHICCAQNSPQDYLNAHNTARAQVGVGPMSWDNTVAAYAQNYANQRIGDC 68

Query: 69  KLVLSGGPYGENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLAYTQVVWRR 128
            LV SGGPYGENLAW S  SLTG  AV +WV +K  Y+Y SN CVG Q C  YTQVVWR 
Sbjct: 69  NLVHSGGPYGENLAWGSP-SLTGTDAVNMWVGEKSNYDYNSNSCVGGQ-CGHYTQVVWRN 128

Query: 129 SKKLGCARVKCTNGGTFVICSYSPRGNISSQRPY 163
           S +LGCAR++C  GG FV C+Y PRGN   QRPY
Sbjct: 129 SVRLGCARIQCNKGGWFVTCNYDPRGNYIGQRPY 160

[Close]
BLAST of Cp4.1LG04g07480 vs. TrEMBL
Match: V5LTF1_CAMSI (Pathogenesis related protein OS=Camellia sinensis GN=PR1 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.0e-51
Identity = 101/163 (61.96%), Postives = 115/163 (70.55%), Query Frame = 1 

Query: 1   MDVFKIFFALICVSGLFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSY 60
           M V  +  AL+C+  L LV PS AQNS +DYLNAHNAAR  VGVGP+ WD  +AAYAQ Y
Sbjct: 1   MVVCNLSLALVCLMSLVLVHPSYAQNSQQDYLNAHNAARAQVGVGPMTWDNNVAAYAQRY 60

Query: 61  ANKRMRDCKLVLSGGPYGENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLA 120
           A+ RM DC LV SGGPYGENLA   + S TG   V LWV +K +Y+Y SN CVG + C  
Sbjct: 61  ASSRMGDCNLVHSGGPYGENLA-EGNGSFTGTAGVNLWVGEKPYYDYNSNSCVGRKECRH 120

Query: 121 YTQVVWRRSKKLGCARVKCTNGG-TFVICSYSPRGNISSQRPY 163
           YTQVVWR S +LGCARV+CTN G  FVICSY P GN   QRPY
Sbjct: 121 YTQVVWRNSVRLGCARVQCTNNGWWFVICSYDPPGNYIGQRPY 162

[Close]
BLAST of Cp4.1LG04g07480 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 187.2 bits (474), Expect = 8.0e-48
Identity = 88/157 (56.05%), Postives = 113/157 (71.97%), Query Frame = 1 

Query: 6   IFFALICVSGLFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSYANKRM 65
           +F AL+      LV PS AQ+SP+DYL  HN AR  VGVGP+ WD ++AAYA+SYA +  
Sbjct: 12  VFVALVGA----LVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLR 71

Query: 66  RDCKLVLSGGPYGENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLAYTQVV 125
            +C+L+ SGGPYGENLAW S   L+GV AV +WVS+K  YNY +N C G   C  YTQVV
Sbjct: 72  GNCRLIHSGGPYGENLAWGSG-DLSGVSAVNMWVSEKANYNYAANTCNG--VCGHYTQVV 131

Query: 126 WRRSKKLGCARVKCTNGGTFVICSYSPRGNISSQRPY 163
           WR+S +LGCA+V+C NGGT + C+Y PRGN  +++PY
Sbjct: 132 WRKSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]
BLAST of Cp4.1LG04g07480 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 180.6 bits (457), Expect = 7.5e-46
Identity = 88/162 (54.32%), Postives = 109/162 (67.28%), Query Frame = 1 

Query: 1   MDVFKIFFALICVSGLFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSY 60
           M+ FK  F L+ V+  FLV  + AQN+P+DYLN+HN AR  VGV  + WD  LAAYA +Y
Sbjct: 1   MNTFKTPF-LVIVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNY 60

Query: 61  ANKRMRDCKLVLSGGPYGENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLA 120
           +N R  DC LV S GPYGENLA  S  S + + AVKLWV +K +Y+Y  N C G + CL 
Sbjct: 61  SNFRKADCNLVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLH 120

Query: 121 YTQVVWRRSKKLGCARVKCTNGGTFVICSYSPRGNISSQRPY 163
           YTQVVWR S K+GCARV+CTN   FV C+Y+  GN   + PY
Sbjct: 121 YTQVVWRDSVKIGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]
BLAST of Cp4.1LG04g07480 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 179.5 bits (454), Expect = 1.7e-45
Identity = 84/145 (57.93%), Postives = 105/145 (72.41%), Query Frame = 1 

Query: 18  LVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSYANKRMRDCKLVLSGGPY 77
           LV P  AQ+S +DY+NAHN AR  +GVGP+ WD  LAAYA++YAN+   DC+LV S GPY
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPY 79

Query: 78  GENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLAYTQVVWRRSKKLGCARV 137
           GENLA  S   L+GV AV LWV++K  YNY +N C G   C  YTQVVWR S +LGCA+V
Sbjct: 80  GENLA-KSGGDLSGVAAVNLWVNEKANYNYDTNTCNG--VCGHYTQVVWRNSVRLGCAKV 139

Query: 138 KCTNGGTFVICSYSPRGNISSQRPY 163
           +C NGGT + C+Y P GN ++Q+PY
Sbjct: 140 RCNNGGTIISCNYDPPGNYANQKPY 161

[Close]
BLAST of Cp4.1LG04g07480 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 177.6 bits (449), Expect = 6.4e-45
Identity = 81/147 (55.10%), Postives = 104/147 (70.75%), Query Frame = 1 

Query: 16  LFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSYANKRMRDCKLVLSGG 75
           L L+    AQ+SP+D+L  HN AR  VGVGPL WD K+AAYA++YAN+R  DC +  S G
Sbjct: 18  LVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSG 77

Query: 76  PYGENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLAYTQVVWRRSKKLGCA 135
            YGEN+AWSS  S+TGV AV +WV ++  Y+Y SN C  D+ C  YTQVVWR S++LGCA
Sbjct: 78  SYGENIAWSSG-SMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCA 137

Query: 136 RVKCTNGGTFVICSYSPRGNISSQRPY 163
           +V+C NG TF+ C+Y P GN   + PY
Sbjct: 138 KVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]
BLAST of Cp4.1LG04g07480 vs. TAIR10
Match: AT1G50050.1 (AT1G50050.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 168.7 bits (426), Expect = 3.0e-42
Identity = 85/161 (52.80%), Postives = 105/161 (65.22%), Query Frame = 1 

Query: 1   MDVFKIFFALICVSGLFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSY 60
           M+ FK  F LI V+  FLV  + AQN+ +DYLN HN AR  VGV  + WD  +AAYA +Y
Sbjct: 1   MNTFKTPF-LIIVAISFLVLATNAQNAQQDYLNTHNTARAQVGVANVVWDTVVAAYATNY 60

Query: 61  ANKRMRDCKLVLS-GGPYGENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCL 120
           AN R  DC L  S GG YGENLA  ++   TGV AV LWV++K +YNY +N C+G Q C 
Sbjct: 61  ANARKVDCSLTPSTGGSYGENLANGNNALFTGVAAVNLWVNEKPYYNYTANACIGAQQCK 120

Query: 121 AYTQVVWRRSKKLGCARVKCTNGGTFVICSYSPRGNISSQR 161
            YTQVVW  S K+GCARV C NGG FV C+Y     + S++
Sbjct: 121 HYTQVVWSNSVKIGCARVLCNNGGYFVGCNYDASAALKSRK 160

[Close]
BLAST of Cp4.1LG04g07480 vs. NCBI nr
Match: gi|823204494|ref|XP_012436493.1| (PREDICTED: pathogenesis-related protein 1-like [Gossypium raimondii])

HSP 1 Score: 213.0 bits (541), Expect = 3.9e-52
Identity = 95/154 (61.69%), Postives = 116/154 (75.32%), Query Frame = 1 

Query: 9   ALICVSGLFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSYANKRMRDC 68
           AL C+ GL LV PS AQ+S +DYLNAHN AR  VGVGP+ WD  +AAYA++YA +R+ DC
Sbjct: 10  ALTCLVGLVLVLPSHAQDSQQDYLNAHNTARAAVGVGPMTWDNTVAAYAENYAKQRIADC 69

Query: 69  KLVLSGGPYGENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLAYTQVVWRR 128
            LV SGGPYGEN+AW S   L+G  AV +WV++K  YNY SN+C   + C  YTQVVWR 
Sbjct: 70  NLVHSGGPYGENIAWGS-ADLSGTDAVNMWVNEKANYNYNSNRCAAGKVCGHYTQVVWRN 129

Query: 129 SKKLGCARVKCTNGGTFVICSYSPRGNISSQRPY 163
           S  LGCA+VKC NGGTF++C+YSPRGNI  Q+PY
Sbjct: 130 SVHLGCAKVKCNNGGTFIVCNYSPRGNIVGQKPY 162

[Close]
BLAST of Cp4.1LG04g07480 vs. NCBI nr
Match: gi|147795410|emb|CAN77102.1| (hypothetical protein VITISV_021166 [Vitis vinifera])

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-51
Identity = 100/154 (64.94%), Postives = 113/154 (73.38%), Query Frame = 1 

Query: 9   ALICVSGLFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSYANKRMRDC 68
           AL+C  GL L     AQNSP+DYLNAHN AR  VGVGP+ WD  +AAYAQ+YAN+R+ DC
Sbjct: 9   ALLCFMGLALAHICCAQNSPQDYLNAHNTARAQVGVGPMSWDNTVAAYAQNYANQRIGDC 68

Query: 69  KLVLSGGPYGENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLAYTQVVWRR 128
            LV SGGPYGENLAW S  SLTG  AV LWV +K  Y+Y SN CVG Q C  YTQVVW +
Sbjct: 69  NLVHSGGPYGENLAWGSP-SLTGTDAVNLWVGEKSNYDYNSNSCVGGQ-CGHYTQVVWSK 128

Query: 129 SKKLGCARVKCTNGGTFVICSYSPRGNISSQRPY 163
           S +LGCARV+C NGG FV C+Y PRGN   QRPY
Sbjct: 129 SVRLGCARVQCNNGGWFVTCNYDPRGNYIGQRPY 160

[Close]
BLAST of Cp4.1LG04g07480 vs. NCBI nr
Match: gi|731384092|ref|XP_002273788.2| (PREDICTED: pathogenesis-related protein 1 [Vitis vinifera])

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-51
Identity = 100/154 (64.94%), Postives = 113/154 (73.38%), Query Frame = 1 

Query: 9   ALICVSGLFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSYANKRMRDC 68
           AL+C  GL L     AQNSP+DYLNAHN AR  VGVGP+ WD  +AAYAQ+YAN+R+ DC
Sbjct: 46  ALLCFMGLALAHICCAQNSPQDYLNAHNTARAQVGVGPMSWDNTVAAYAQNYANQRIGDC 105

Query: 69  KLVLSGGPYGENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLAYTQVVWRR 128
            LV SGGPYGENLAW S  SLTG  AV LWV +K  Y+Y SN CVG Q C  YTQVVW +
Sbjct: 106 NLVHSGGPYGENLAWGSP-SLTGTDAVNLWVGEKSNYDYNSNSCVGGQ-CGHYTQVVWSK 165

Query: 129 SKKLGCARVKCTNGGTFVICSYSPRGNISSQRPY 163
           S +LGCARV+C NGG FV C+Y PRGN   QRPY
Sbjct: 166 SVRLGCARVQCNNGGWFVTCNYDPRGNYIGQRPY 197

[Close]
BLAST of Cp4.1LG04g07480 vs. NCBI nr
Match: gi|255562114|ref|XP_002522065.1| (PREDICTED: basic form of pathogenesis-related protein 1 [Ricinus communis])

HSP 1 Score: 210.7 bits (535), Expect = 1.9e-51
Identity = 97/158 (61.39%), Postives = 116/158 (73.42%), Query Frame = 1 

Query: 5   KIFFALICVSGLFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSYANKR 64
           KI  AL  +  L L+  S AQN P+DY+NAHNAAR  VGVGP+ WD  +AAYAQ+YAN+R
Sbjct: 5   KISAALSFLISLSLILSSHAQNLPQDYINAHNAARAAVGVGPMTWDNTVAAYAQNYANQR 64

Query: 65  MRDCKLVLSGGPYGENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLAYTQV 124
           + DC+LV SGG YGEN+AWSS   L+G  AVKLWV +K FYNY SN C   Q C  YTQV
Sbjct: 65  INDCRLVHSGGRYGENIAWSSG-DLSGTAAVKLWVDEKAFYNYNSNTCAAGQQCGHYTQV 124

Query: 125 VWRRSKKLGCARVKCTNGGTFVICSYSPRGNISSQRPY 163
           VWR S +LGCA+V+C NGGTF+ C+Y P GN  +QRPY
Sbjct: 125 VWRNSVRLGCAKVRCRNGGTFITCNYDPPGNFVNQRPY 161

[Close]
BLAST of Cp4.1LG04g07480 vs. NCBI nr
Match: gi|558483701|gb|AHA56682.1| (pathogenesis related protein [Camellia sinensis])

HSP 1 Score: 209.5 bits (532), Expect = 4.3e-51
Identity = 101/163 (61.96%), Postives = 115/163 (70.55%), Query Frame = 1 

Query: 1   MDVFKIFFALICVSGLFLVKPSLAQNSPKDYLNAHNAARKMVGVGPLFWDRKLAAYAQSY 60
           M V  +  AL+C+  L LV PS AQNS +DYLNAHNAAR  VGVGP+ WD  +AAYAQ Y
Sbjct: 1   MVVCNLSLALVCLMSLVLVHPSYAQNSQQDYLNAHNAARAQVGVGPMTWDNNVAAYAQRY 60

Query: 61  ANKRMRDCKLVLSGGPYGENLAWSSDRSLTGVGAVKLWVSKKGFYNYRSNKCVGDQSCLA 120
           A+ RM DC LV SGGPYGENLA   + S TG   V LWV +K +Y+Y SN CVG + C  
Sbjct: 61  ASSRMGDCNLVHSGGPYGENLA-EGNGSFTGTAGVNLWVGEKPYYDYNSNSCVGRKECRH 120

Query: 121 YTQVVWRRSKKLGCARVKCTNGG-TFVICSYSPRGNISSQRPY 163
           YTQVVWR S +LGCARV+CTN G  FVICSY P GN   QRPY
Sbjct: 121 YTQVVWRNSVRLGCARVQCTNNGWWFVICSYDPPGNYIGQRPY 162

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g07480 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PR1_ARATH1.4e-4656.05Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1[more]
PR1_SAMNI1.9e-4654.84Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1[more]
PRB1_TOBAC2.4e-4659.31Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1[more]
PRB1_ARATH3.0e-4457.93Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1[more]
PR12_HORVU1.6e-4251.22Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1[more]
BLAST of Cp4.1LG04g07480 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D2TX10_GOSRA2.7e-5261.69Uncharacterized protein OS=Gossypium raimondii GN=B456_008G044000 PE=3 SV=1[more]
A5BNW5_VITVI7.9e-5264.94Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00810 PE=3 SV=... [more]
B9S7U9_RICCO1.3e-5161.39STS14 protein, putative OS=Ricinus communis GN=RCOM_1381930 PE=3 SV=1[more]
A9CSN7_9ROSI3.0e-5163.64Putative pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=Tam-PR1 PE=2... [more]
V5LTF1_CAMSI3.0e-5161.96Pathogenesis related protein OS=Camellia sinensis GN=PR1 PE=2 SV=1[more]
BLAST of Cp4.1LG04g07480 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G14610.18.0e-4856.05 pathogenesis-related gene 1[more]
AT1G50060.17.5e-4654.32 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT2G14580.11.7e-4557.93 basic pathogenesis-related protein 1[more]
AT4G33720.16.4e-4555.10 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT1G50050.13.0e-4252.80 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
BLAST of Cp4.1LG04g07480 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|823204494|ref|XP_012436493.1|3.9e-5261.69PREDICTED: pathogenesis-related protein 1-like [Gossypium raimondii][more]
gi|147795410|emb|CAN77102.1|1.1e-5164.94hypothetical protein VITISV_021166 [Vitis vinifera][more]
gi|731384092|ref|XP_002273788.2|1.1e-5164.94PREDICTED: pathogenesis-related protein 1 [Vitis vinifera][more]
gi|255562114|ref|XP_002522065.1|1.9e-5161.39PREDICTED: basic form of pathogenesis-related protein 1 [Ricinus communis][more]
gi|558483701|gb|AHA56682.1|4.3e-5161.96pathogenesis related protein [Camellia sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: INTERPRO
TermDefinition
IPR018244Allrgn_V5/Tpx1_CS
IPR014044CAP_domain
IPR001283Allrgn_V5/Tpx1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g07480.1Cp4.1LG04g07480.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 145..158
score: 5.3E-15coord: 94..107
score: 5.3E-15coord: 118..134
score: 5.3E-15coord: 47..65
score: 5.3
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 1..162
score: 2.7
IPR014044CAP domainGENE3DG3DSA:3.40.33.10coord: 27..162
score: 1.5
IPR014044CAP domainPFAMPF00188CAPcoord: 32..150
score: 1.4
IPR014044CAP domainSMARTSM00198SCP_3coord: 26..158
score: 9.9
IPR014044CAP domainunknownSSF55797PR-1-likecoord: 8..162
score: 3.01
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 145..156
scor
NoneNo IPR availablePANTHERPTHR10334:SF223F2J10.6 PROTEIN-RELATEDcoord: 1..162
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g07480Cucsa.218900Cucumber (Gy14) v1cgycpeB0602
Cp4.1LG04g07480CSPI07G06600Wild cucumber (PI 183967)cpecpiB697
Cp4.1LG04g07480Lsi03G006090Bottle gourd (USVL1VR-Ls)cpelsiB543
Cp4.1LG04g07480CsaV3_7G007580Cucumber (Chinese Long) v3cpecucB0868
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g07480Silver-seed gourdcarcpeB0409
Cp4.1LG04g07480Silver-seed gourdcarcpeB0529
Cp4.1LG04g07480Silver-seed gourdcarcpeB0639
Cp4.1LG04g07480Silver-seed gourdcarcpeB1033
Cp4.1LG04g07480Wax gourdcpewgoB0856
Cp4.1LG04g07480Cucurbita pepo (Zucchini)cpecpeB269
Cp4.1LG04g07480Cucurbita pepo (Zucchini)cpecpeB400
Cp4.1LG04g07480Cucurbita maxima (Rimu)cmacpeB154
Cp4.1LG04g07480Cucurbita maxima (Rimu)cmacpeB539
Cp4.1LG04g07480Cucurbita maxima (Rimu)cmacpeB749
Cp4.1LG04g07480Cucurbita moschata (Rifu)cmocpeB126
Cp4.1LG04g07480Cucurbita moschata (Rifu)cmocpeB321
Cp4.1LG04g07480Cucurbita moschata (Rifu)cmocpeB494
Cp4.1LG04g07480Cucurbita moschata (Rifu)cmocpeB703
Cp4.1LG04g07480Cucumber (Chinese Long) v2cpecuB695
Cp4.1LG04g07480Bottle gourd (USVL1VR-Ls)cpelsiB548
Cp4.1LG04g07480Watermelon (Charleston Gray)cpewcgB590
Cp4.1LG04g07480Watermelon (97103) v1cpewmB665
Cp4.1LG04g07480Melon (DHL92) v3.5.1cpemeB604
Cp4.1LG04g07480Cucumber (Gy14) v2cgybcpeB969
Cp4.1LG04g07480Melon (DHL92) v3.6.1cpemedB715
Cp4.1LG04g07480Melon (DHL92) v3.6.1cpemedB769