Cp4.1LG04g07400 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g07400
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Basic helix-loop-helix transcription factor
Location	Cp4.1LG04 : 4145872 .. 4149654 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGATTCCAAAGTCATAATCATCCATGATTTTATCGGTTCCCATTTCTTCTTCAAACCCTCAAGACTTTCTTCCATTCCATACCGAAATCAAACTCTCCACCCCGTGAGAATCCGAGAGCGACTGTTCATAAACCTAGCCATTGGCAGGTGAACAATAAAGCTTCAAAAAGGCTTCTCCATGTCTCTTCCCTGCCATTGTTGAGGTGAGAACAAAAGCTTTCTGCCATTTTGTTATGGCGATCATGTTTGCTTAAATGGGTTTCTTTCTGAGTTTGTTTTGTTGTTGGGGTTAATGGGTTCTTGGAGATTCTCCATTGTTTTGGGACTGTTCTTGTAGATTTTGATGGGAAGTGGGGGAAATTAGGGTTGGTGGGTGAATTGACTTAGTTTATGTCTTTTGCAGTTTAGCTGACTGGTTTGAGGAGGTTTGTTTTGGTGAAGAAGAAGCTTTTTGGATGGAGATATCATCTATGATGGGGTTTTCTGAGATGGTAAGAGGATTTGATTGATAGAATGATACTTTGGAACTTGTTTGTGTGTAGTTATGTAATATCAACTTAAGCTTTTGGGTCTGCTGGATAGGAGTTTCTATGTTTGAATCTAGTTGTTTTGCTTCGAATTAATATGAATGATCACTCGTTGGATCTTGTATTAATCTCTGAGTCAACGAGTGAAGGACGGAGAAGAATTGTGAGATTCTACATCGGTCGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCCCCTAAAAACCTTGAGTTGTGGGATTGGGCCGTTACAAATGGTATTAGAGTCAGGCCCTGGGGATGTGCCAGTGAGGAGTCTGAGCCCCAACGGGAGGTGAACATGAGGCGGAGTGCCAGCGAGGACGCTAGGCCCTAAAAGGGGGTGGATTGTGAGATCCTATATCGGTTGGAGAGGAGAACGAAGCATTCTCTATAAGGGTGTGGAAACCTCTCCTTAGGCTCCAAAGGGGGTGAATTGTGAGATCTTACATTGGTTGGGGAGGAGAACTAAGCATTCTTTAGAAGGGTGTGGAAACCTCTCCCTAGGCCCTAAAGGGGGTGCAATGTGAGATCTCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGGCCCCAAAGGGGTGGATTGTGAGATCCCACATCGATTGGGGAGGAAAACGAAGCATTCTTTATAAGGGTGTGGAAACCTTTCCCTAGGCCCCAAAGGGGGTGCAATGTGAGATCTCACATCGATCGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAAGCCCCAAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTAAAAATCTTGAGGGGAAGCCTAAAAGGGAAAGCTCGGGCAAGCCCAAAGAGGACAATATCTGCTAGTGGTGGGCTTGAACAGTTACAAGAATATACGAAGTTTAAGTTATGTTTTTCGGTTTAGTGATAGGAGCACGATAGGTTTGGACGTGTTTGGATCAGAAAAGGAAATGGACCATTGATGAAGTTGTTCTTTCTTTTGTAGGGAATGGAGGATAGTGGCTTTGTCAATCAGTGGCACAAGAGCTCTATAGATGAGATTAGCACACTCCCATTAGCAGCAGCTTTTGGGGAGAATTTGCAGCATTCTTATGCTCATACAAACCTTGACCATAAGGCTTCTTCAAACCATTCTCAAAATGCCATATTTGGGTACGCGAAACATCTCAGTTCATACCAAACAGCTAATCATTCGCCAAATGCACACGTCGTTGCATATCCGACCACGTCTGTTTCGGCTTCCAACTACACGAATCAAATGGACTTCACAAGGCCAAAAGAGGAGGTTGTGTGTCCTCAGAGTATCAGCAATATCCCTTCTGATATGTTGATTTCTCAGGGCTCATTATGTCACCAAAGCCATTTAACCAAGTCCGACCGTGGAGCGAAAAGAACTGCTATCAAAAGTAGACTCCCCCCAGCTCAAGATCACATTCTTGCAGAGAGGAAACGGCGAGAGAAGCTCAGCCAGCGGTTTATCGCCTTGTCTGCTATCGTTCCTGGTCTTAAGAAGGTATGGATCTTTAACTTTTTGGCTGATAAATGAAGAGAAACTGTTTAAGTCTGTTATTTCCCTGGCTGCTGATAGATGGACAAGGCTTCTGTTCTTGGAGATGCCATCAAGTACCTGAAACAACTGCAGGAGAAAGTGAAGATACTAGAGGAACAAACTCGAAGGAAAGACATTGAATCCGTGGTATTCGTCAAGAAATCCCGAGTTTTCGGTGATGGAAACAACACATCGAAAACGGAGGATGAGCCACTTCCTGAGATCGAAGCCAGATCTTGCGACAAGAACATCCTTATAAGAATACACTGTGTGAAAAACAAAGATGTCATAGAGAAGACCATTGCTGAAATTGAAAAGTTGCACCTAACTATAGTCAACAGCAGCTTTATGTCATTTGGGAATCTTGCTCTTGACATAACCATTATTGCTCAGGTAATAACTCAACCTCATGTAACGGCTCAAACCTACTACTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGTTTTTAAAATGTGTTTGCTAGGGAGAGGTTTCCACGCCCTTATAAAAAATGTTTAGTTCTCCTCTCCAATTGACATGGGATCTCACAATCCACCCTCTTTCGGGACCCAGCGTCTTCGCTGGCACTTGTTCCCTTCTCCCATCGATGTGGGACCCCCCAATTCACCCCCCTTCGGGACCCAACGTCCTTGTTGGCACACCGCCTTGTGTCCACACCCCTTCTGGGCTTAGCCTCCCGTTGGCACATCGCCCAATGTCTAGCTCTAATACCATTTGGAACCGTTCAAGCCCATTGCTAGTAAATATTGTCCTCTTTAGGCTTTCCCTTCTAGGCTTCCCGTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTTGTTCTCCTCCTCAATCGATGTGGGATCTCACACCGATCGTATACTTAGATAAGACAACCATTCAAGTTCTTGCCCTGCAATCAGTTCCACATTTTAAATGTGTTTGTCCATACAAATGTGAGCTGTTCTTGAAACATGTTCATCTTTTTGCAGATGGATAACGAATTCCGTTTGTCACTAAAGGATCTCGTGAAGAACTTGCAGTCGACTCTCCGTTCGTTCCAATGAGAAGATAGAAGAATGTTTTCAGATCTTCCATAGCCTTCAAACAAAATAAGAACAGTCAGTTCCAAGTCTAAGCCCATCCCTTATGTTTACAGGTCCGTGATGTTCCAACAAATATAGACCAATACCCTTAAAGCAAACCAGTTGTGAGATTCAGATTGCAGGTGGGGGGGTTTTTTTCTGTCATTTTTGTGTCTTGTTTGGAGGTTTTTTAGCCATTGAGGGTTCCCAGAAAGCAGCCAACTCTGTGGTTTCTTCTCCTTACATTACATGGAACTGATATGAGAAAGGGAACTTGGTTTTTTGAAGTTTGTAGAACAGCAAAGGCCTTTGTGTTGTGTTTTTTTTTTACAGTTTATTGCTGTTTGTTTGCTGTTTTTTGAGGCTTCCATGACATTGTTTCAGCCTCTTTTTACACTCACTTTGCTTTGTAATTTCTTGATTGGAAGTGATGAAATAGTAAAAAAGAATACTCTTTTATC

mRNA sequence

TGGATTCCAAAGTCATAATCATCCATGATTTTATCGGTTCCCATTTCTTCTTCAAACCCTCAAGACTTTCTTCCATTCCATACCGAAATCAAACTCTCCACCCCGTGAGAATCCGAGAGCGACTGTTCATAAACCTAGCCATTGGCAGGTGAACAATAAAGCTTCAAAAAGGCTTCTCCATGTCTCTTCCCTGCCATTGTTGAGTTTAGCTGACTGGTTTGAGGAGGTTTGTTTTGGTGAAGAAGAAGCTTTTTGGATGGAGATATCATCTATGATGGGGTTTTCTGAGATGGGAATGGAGGATAGTGGCTTTGTCAATCAGTGGCACAAGAGCTCTATAGATGAGATTAGCACACTCCCATTAGCAGCAGCTTTTGGGGAGAATTTGCAGCATTCTTATGCTCATACAAACCTTGACCATAAGGCTTCTTCAAACCATTCTCAAAATGCCATATTTGGGTACGCGAAACATCTCAGTTCATACCAAACAGCTAATCATTCGCCAAATGCACACGTCGTTGCATATCCGACCACGTCTGTTTCGGCTTCCAACTACACGAATCAAATGGACTTCACAAGGCCAAAAGAGGAGGTTGTGTGTCCTCAGAGTATCAGCAATATCCCTTCTGATATGTTGATTTCTCAGGGCTCATTATGTCACCAAAGCCATTTAACCAAGTCCGACCGTGGAGCGAAAAGAACTGCTATCAAAAGTAGACTCCCCCCAGCTCAAGATCACATTCTTGCAGAGAGGAAACGGCGAGAGAAGCTCAGCCAGCGGTTTATCGCCTTGTCTGCTATCGTTCCTGGTCTTAAGAAGATGGACAAGGCTTCTGTTCTTGGAGATGCCATCAAGTACCTGAAACAACTGCAGGAGAAAGTGAAGATACTAGAGGAACAAACTCGAAGGAAAGACATTGAATCCGTGGTATTCGTCAAGAAATCCCGAGTTTTCGGTGATGGAAACAACACATCGAAAACGGAGGATGAGCCACTTCCTGAGATCGAAGCCAGATCTTGCGACAAGAACATCCTTATAAGAATACACTGTGTGAAAAACAAAGATGTCATAGAGAAGACCATTGCTGAAATTGAAAAGTTGCACCTAACTATAATGGATAACGAATTCCGTTTGTCACTAAAGGATCTCGTGAAGAACTTGCAGTCGACTCTCCGTTCGTTCCAATGAGAAGATAGAAGAATGTTTTCAGATCTTCCATAGCCTTCAAACAAAATAAGAACAGTCAGTTCCAAGTCTAAGCCCATCCCTTATGTTTACAGGTCCGTGATGTTCCAACAAATATAGACCAATACCCTTAAAGCAAACCAGTTGTGAGATTCAGATTGCAGGTGGGGGGGTTTTTTTCTGTCATTTTTGTGTCTTGTTTGGAGGTTTTTTAGCCATTGAGGGTTCCCAGAAAGCAGCCAACTCTGTGGTTTCTTCTCCTTACATTACATGGAACTGATATGAGAAAGGGAACTTGGTTTTTTGAAGTTTGTAGAACAGCAAAGGCCTTTGTGTTGTGTTTTTTTTTTACAGTTTATTGCTGTTTGTTTGCTGTTTTTTGAGGCTTCCATGACATTGTTTCAGCCTCTTTTTACACTCACTTTGCTTTGTAATTTCTTGATTGGAAGTGATGAAATAGTAAAAAAGAATACTCTTTTATC

Coding sequence (CDS)

ATGGAGATATCATCTATGATGGGGTTTTCTGAGATGGGAATGGAGGATAGTGGCTTTGTCAATCAGTGGCACAAGAGCTCTATAGATGAGATTAGCACACTCCCATTAGCAGCAGCTTTTGGGGAGAATTTGCAGCATTCTTATGCTCATACAAACCTTGACCATAAGGCTTCTTCAAACCATTCTCAAAATGCCATATTTGGGTACGCGAAACATCTCAGTTCATACCAAACAGCTAATCATTCGCCAAATGCACACGTCGTTGCATATCCGACCACGTCTGTTTCGGCTTCCAACTACACGAATCAAATGGACTTCACAAGGCCAAAAGAGGAGGTTGTGTGTCCTCAGAGTATCAGCAATATCCCTTCTGATATGTTGATTTCTCAGGGCTCATTATGTCACCAAAGCCATTTAACCAAGTCCGACCGTGGAGCGAAAAGAACTGCTATCAAAAGTAGACTCCCCCCAGCTCAAGATCACATTCTTGCAGAGAGGAAACGGCGAGAGAAGCTCAGCCAGCGGTTTATCGCCTTGTCTGCTATCGTTCCTGGTCTTAAGAAGATGGACAAGGCTTCTGTTCTTGGAGATGCCATCAAGTACCTGAAACAACTGCAGGAGAAAGTGAAGATACTAGAGGAACAAACTCGAAGGAAAGACATTGAATCCGTGGTATTCGTCAAGAAATCCCGAGTTTTCGGTGATGGAAACAACACATCGAAAACGGAGGATGAGCCACTTCCTGAGATCGAAGCCAGATCTTGCGACAAGAACATCCTTATAAGAATACACTGTGTGAAAAACAAAGATGTCATAGAGAAGACCATTGCTGAAATTGAAAAGTTGCACCTAACTATAATGGATAACGAATTCCGTTTGTCACTAAAGGATCTCGTGAAGAACTTGCAGTCGACTCTCCGTTCGTTCCAATGA

Protein sequence

MEISSMMGFSEMGMEDSGFVNQWHKSSIDEISTLPLAAAFGENLQHSYAHTNLDHKASSNHSQNAIFGYAKHLSSYQTANHSPNAHVVAYPTTSVSASNYTNQMDFTRPKEEVVCPQSISNIPSDMLISQGSLCHQSHLTKSDRGAKRTAIKSRLPPAQDHILAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSRVFGDGNNTSKTEDEPLPEIEARSCDKNILIRIHCVKNKDVIEKTIAEIEKLHLTIMDNEFRLSLKDLVKNLQSTLRSFQ

Homology

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BLAST of Cp4.1LG04g07400 vs. Swiss-Prot
Match: BH025_ARATH (Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2 SV=2)

HSP 1 Score: 154.1 bits (388), Expect = 2.6e-36
Identity = 122/337 (36.20%), Postives = 179/337 (53.12%), Query Frame = 1


Query: 1   MEISSMMGFSEMGMEDSGFVNQWHKSSI-DEISTLPLAAAFGENLQHSYAHTNLDHKASS 60
           M I S   FSE  +E++  + Q+H +SI  E+              +  ++ +L      
Sbjct: 1   MSILSTRWFSEQEIEENSIIQQFHMNSIVGEVQEAQYIFPHSFTTNNDPSYDDLIEMKPP 60

Query: 61  NHSQNAIFGYAKHLSSYQTANHSPNAHVVAYPTTSVSASNYTNQMDFTRPKEEVVCPQSI 120
              +      + HL      N  P+ H+  + ++ + +       D     E    P  +
Sbjct: 61  KILETTYISPSSHLPP----NSKPH-HIHRHSSSRILSFEDYGSNDM----EHEYSPTYL 120

Query: 121 SNIPSDMLISQGSLCHQSHLTKSDRGAKRTAIKSRLPP-AQDHILAERKRREKLSQRFIA 180
           ++I S  L +Q    HQ     + +G KR    SR    AQDHI+AERKRREKL+QRF+A
Sbjct: 121 NSIFSPKLEAQVQP-HQKSDEFNRKGTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVA 180

Query: 181 LSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSRVFGDGNN 240
           LSA+VPGLKKMDKASVLGDA+K++K LQE+V  LEEQ + + +ES+V VKKS++  D NN
Sbjct: 181 LSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERRLESMVLVKKSKLILDDNN 240

Query: 241 TSKT-------EDEPLPEIEARSCDKNILIRIHCVKNKDVIEKTIAEIEKLHLTI----- 300
            S +        D  LPEIE R  D+++LI+I C K K  + K +AEIEKLH+ I     
Sbjct: 241 QSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSV 300

Query: 301 --------------MDNEFRLSLKDLVKNLQSTLRSF 310
                          +++F ++L D+VK+L+S L +F
Sbjct: 301 LNFGPTLDITIIAKKESDFDMTLMDVVKSLRSALSNF 327

[Close]

BLAST of Cp4.1LG04g07400 vs. Swiss-Prot
Match: BH018_ARATH (Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.1e-34
Identity = 104/253 (41.11%), Postives = 141/253 (55.73%), Query Frame = 1


Query: 81  HSPNAHVVAYPTTSVSASNYTNQMDFTRPKEEVVCPQSISNIPSDMLISQGSLCHQSHLT 140
           H P++ ++++  T +   N+ +      PK+E +    +       LI +G+   QS LT
Sbjct: 63  HQPSSRILSFEKTGLHVMNHNSPNLIFSPKDEEI---GLPEHKKAELIIRGTKRAQS-LT 122

Query: 141 KSDRGAKRTAIKSRLPPAQDHILAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIK 200
           +S   A            QDHILAERKRREKL+QRF+ALSA++PGLKKMDKASVLGDAIK
Sbjct: 123 RSQSNA------------QDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIK 182

Query: 201 YLKQLQEKVKILEEQTRRKDIESVVFVKKSRVF------------GDGNNTSKTEDEPLP 260
           ++K LQE VK  EEQ + K +ESVV VKKS +              DGN  S + +  LP
Sbjct: 183 HIKYLQESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSN--LP 242

Query: 261 EIEARSCDKNILIRIHCVKNKDVIEKTIAEIEKLHLTI-------------------MDN 303
           EIE R   K++LI+I C K K  + K + EIEKL L+I                    +N
Sbjct: 243 EIEVRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFGPTFDISIIAQKNN 297

[Close]

BLAST of Cp4.1LG04g07400 vs. Swiss-Prot
Match: BH020_ARATH (Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.8e-27
Identity = 79/189 (41.80%), Postives = 119/189 (62.96%), Query Frame = 1


Query: 159 QDHILAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQ--- 218
           ++H+LAERKRR+KL++R IALSA++PGLKK DKA+VL DAIK+LKQLQE+VK LEE+   
Sbjct: 131 KEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVV 190

Query: 219 TRRKDIESVVFVKKSRVFGDGNNT------------SKTEDE------PLPEIEARSCDK 278
           T++ D +S++ VK+S+V+ D +++            S + DE       +P IEAR  D+
Sbjct: 191 TKKMD-QSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARVSDR 250

Query: 279 NILIRIHCVKNKDVIEKTIAEIEKLH--------------------LTIMDNEFRLSLKD 307
           ++LIR+HC KNK  + K ++ +EK                      LT MDN+F   +++
Sbjct: 251 DLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVITILTKMDNKFSRPVEE 310

[Close]

BLAST of Cp4.1LG04g07400 vs. Swiss-Prot
Match: BH019_ARATH (Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.0e-24
Identity = 102/290 (35.17%), Postives = 148/290 (51.03%), Query Frame = 1


Query: 48  YAHTNLDHKASSNHS----QNAIFGYAKHLSSYQTANHSPNAHVVAYPTTSVSASNYTNQ 107
           Y   NL    S ++S    Q++ F +  H   ++     P A V   P   ++       
Sbjct: 22  YEENNLSPDESLSNSRRADQSSKFDHQMH---FECLREKPKAAVK--PMMKINNKQQLIS 81

Query: 108 MDFTRPKEEVVCPQSISNIPSDMLISQGSLCHQ-SHLTKSDRGAKRTAIKSRLPPAQDHI 167
            DF+     V+   +   I  D L+ +G+     SH T+S               A++H+
Sbjct: 82  FDFS---SNVISSPAAEEIIMDKLVGRGTKRKTCSHGTRSP------------VLAKEHV 141

Query: 168 LAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKIL-EEQTRRKDI 227
           LAERKRREKLS++FIALSA++PGLKK DK ++L DAI  +KQLQE+++ L EE+   + +
Sbjct: 142 LAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEATRQM 201

Query: 228 ESVVFVKKSRVFGDGN-NTSKTE------DEPLPEIEARSCDKNILIRIHCVKNKDVIEK 287
           ES++ VKKS+VF D   N S +       D+ LPEIEA+    +ILIRI C K+K  +  
Sbjct: 202 ESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDILIRILCEKSKGCMIN 261

Query: 288 TIAEIEKLHLTI--------------------MDNEFRLS-LKDLVKNLQ 304
            +  IE   L I                    MD +F +S LKDLV+NL+
Sbjct: 262 ILNTIENFQLRIENSIVLPFGDSTLDITVLAQMDKDFSMSILKDLVRNLR 291

[Close]

BLAST of Cp4.1LG04g07400 vs. Swiss-Prot
Match: BHLHW_PEA (Basic helix-loop-helix protein A OS=Pisum sativum GN=BHLH PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.4e-13
Identity = 68/250 (27.20%), Postives = 123/250 (49.20%), Query Frame = 1


Query: 82  SPNAHVVAYPTTSVSASNYTNQMDFTRPKEEVVCPQSISNIPSDMLISQGSLCHQSHLTK 141
           SP+ + + Y T S S + +TN      P  +   P +   +   +L +   L  ++H   
Sbjct: 381 SPSINYINYSTQS-SFTTWTNHHFHPPPPPD---PATSQWLVKYILFTVPYLHTKNHDET 440

Query: 142 SDRGAKRTAIKSRLPPAQ-------------DHILAERKRREKLSQRFIALSAIVPGLKK 201
           S +      + S  P A+             +H+LAER+RREKL++RFI L ++VP + K
Sbjct: 441 SPQTRDTAGVNSNDPSARLRGKGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTK 500

Query: 202 MDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIES---VVFV-----KKSRVF---GDGN 261
           MDKAS+LGD I+YLKQL+ K++ LE + R+ + E     V V     KK R+    G G 
Sbjct: 501 MDKASILGDTIEYLKQLRRKIQDLETRNRQMESEKSGVTVLVGPTEKKKVRIVEGNGTGG 560

Query: 262 NTSKTEDEPLPEIEARSCDKNILIRIHCVKNKDVIEKTIAEIEKLHLTIMDNEFRLSLKD 308
                  E +  ++    + + L+ I C++ + ++   +  + +L + ++  +  L+   
Sbjct: 561 GVRAKAVEVVASVQVSIIESDALLEIECLQREGLLLDVMMMLRELRIEVIGVQSSLNNGV 620

[Close]

BLAST of Cp4.1LG04g07400 vs. TrEMBL
Match: A0A0A0K7M3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G069180 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.6e-125
Identity = 246/322 (76.40%), Postives = 264/322 (81.99%), Query Frame = 1


Query: 13  GMEDSGFVNQWHKSSIDEISTLPLAAAFGENLQHSYAHTNLDHKASSNHSQNAIFGYAKH 72
           GMED+GFVNQWHKSS+D++   PLAAAFGENLQHSY  +N+D KAS NHS NAI GY K 
Sbjct: 19  GMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNIDQKASLNHSHNAILGYMKQ 78

Query: 73  L-----SSYQTANHSPNAHVVAYPTTSVSASNYTNQMDFTRPKEEVVCPQSISNIPSDML 132
           L     SSYQT NH PN+ VVAYPT SVSASNY NQMDF+RPKEEVVCPQSISN+PSDML
Sbjct: 79  LKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRPKEEVVCPQSISNLPSDML 138

Query: 133 ISQGSLCHQSHLTKSDRGAKRTAIKSRLPPAQDHILAERKRREKLSQRFIALSAIVPGLK 192
           ISQ SL HQSH TKS+RG +  +  SR+P AQDHILAER+RREKLSQRFIALSAIVPGLK
Sbjct: 139 ISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRREKLSQRFIALSAIVPGLK 198

Query: 193 KMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSRVFGDGNNTSKTEDEPL 252
           KMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKS VF DGN+TSK EDEPL
Sbjct: 199 KMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSHVFPDGNDTSKEEDEPL 258

Query: 253 PEIEARSCDKNILIRIHCVKNKDVIEKTIAEIEKLHLTI--------------------M 310
           PEIEAR CDKN+LIRIHC K KD+IEKTIAEIE LHLTI                    M
Sbjct: 259 PEIEARICDKNVLIRIHCEKKKDIIEKTIAEIENLHLTIVNSSVMSFGSLALDITIIAQM 318

[Close]

BLAST of Cp4.1LG04g07400 vs. TrEMBL
Match: M5W438_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008130mg PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 4.1e-81
Identity = 184/343 (53.64%), Postives = 230/343 (67.06%), Query Frame = 1


Query: 1   MEISSMMGFSEMGMEDSGFVNQWHKSSIDEISTLPLAAAFGENLQHSYAHTNLDHKASSN 60
           MEISS+ G SE+GMED  F+NQWH +S+DE+S LPLAA FGEN   S+ H N + K S +
Sbjct: 1   MEISSIGGMSELGMEDPYFINQWHMNSLDEVSMLPLAAPFGENFNQSHFHPNFNLKTSMD 60

Query: 61  HSQNAIFGYAKHL-----SSYQTANHSPNAHVVAYPTT-SVSASNYTNQMDFTRPKEEV- 120
              + I    K L     SS +T  H  N  V + P   S   SN TNQM   +PKEE  
Sbjct: 61  SCHSGIDRPMKQLKTDGWSSCKTDQHGSNPQVASSPNILSFVNSNSTNQMGVLKPKEEAA 120

Query: 121 VCPQSISNIPSDMLISQGSLCHQSHLTKSDRGAKRTAIKSRLPPAQDHILAERKRREKLS 180
           VC +S +++PSD+L+SQ S  +QS+L K+ +G KR    +RL   QDHI+AERKRREKLS
Sbjct: 121 VCSKSNNSLPSDILLSQSSFGNQSYLFKASQGTKRVNTNTRLSTTQDHIIAERKRREKLS 180

Query: 181 QRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSRVF 240
           QRFIALSA+VPGLKKMDKASVLGDAIKY+KQLQ+KVK LEEQTR+K++ESVVFVKK+++F
Sbjct: 181 QRFIALSAMVPGLKKMDKASVLGDAIKYIKQLQDKVKTLEEQTRKKNMESVVFVKKTQLF 240

Query: 241 GDGNNTSKTE-------DEPLPEIEARSCDKNILIRIHCVKNKDVIEKTIAEIEKLHLTI 300
            + +N+S  E       +E LPEIEAR CD N++IRIHC K K V+EKTIAE+EKL L  
Sbjct: 241 ANDDNSSSEENNSSGPFEETLPEIEARFCDNNVMIRIHCEKRKGVVEKTIAEVEKLQLKF 300

Query: 301 --------------------MDNEFRLSLKDLVKNLQSTLRSF 310
                               M+ EF LS+K+LVKNL+S    F
Sbjct: 301 INSSVLTFGGCALDVTIIAQMEVEFSLSVKELVKNLRSAFDMF 343

[Close]

BLAST of Cp4.1LG04g07400 vs. TrEMBL
Match: A0A059ASU8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02518 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 8.5e-79
Identity = 171/341 (50.15%), Postives = 232/341 (68.04%), Query Frame = 1


Query: 1   MEISSMMGFSEMGMEDSGFVNQWHKSSIDEISTLPLAAAFGENLQHSYAHTNLDHKASSN 60
           ME+++M G  +MG+EDSGF+N W   S DE+ TLPLAAA GE++Q  +   N++ KAS++
Sbjct: 1   MEVTTMRGLPDMGVEDSGFINPWQMHSFDELHTLPLAAALGEHMQGFFPQPNINFKASAD 60

Query: 61  HSQNAIFGYAKHL--SSYQTANHSPNAHVVAYPTTSVS---ASNYTNQMDFTRPKEEVVC 120
            S + I    K L  +S+ +    P +   ++  ++V    +SN+TNQ    +PKEE + 
Sbjct: 61  ASNSVINRPVKQLKTNSWDSCRVDPVSTPQSFSPSNVLSFVSSNFTNQSSVVKPKEEAIG 120

Query: 121 PQSISNIPSDMLISQGSLCHQSHLTKSDRGAKRTAIKSRLPPAQDHILAERKRREKLSQR 180
            +S+ N+ SDML  QGS  +Q+++ K+  G KR +  + L   QDHI+AERKRREKLSQR
Sbjct: 121 SKSVGNVSSDMLFPQGSFGNQNYVLKACHGGKRVSTNNSLSQTQDHIIAERKRREKLSQR 180

Query: 181 FIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSRVFGD 240
           FIALSA+VPGLKKMDKASVLGDAIKYLKQLQE++KILEEQTR++ +ESVVFVKKS+VF D
Sbjct: 181 FIALSALVPGLKKMDKASVLGDAIKYLKQLQERIKILEEQTRKRSMESVVFVKKSQVFED 240

Query: 241 GNNTSKTE-------DEPLPEIEARSCDKNILIRIHCVKNKDVIEKTIAEIEKLHLTI-- 300
           G N+S  E       DE LPE+EAR CD ++L+++HC K+K V+EK I E+EKLHLTI  
Sbjct: 241 GMNSSTDENFSSGPCDELLPEVEARICDNDVLLKVHCEKSKGVLEKIIGEVEKLHLTIIN 300

Query: 301 ------------------MDNEFRLSLKDLVKNLQSTLRSF 310
                             M+ EF + +KDLVKNL++  +SF
Sbjct: 301 SSLMTFGTSAVDITILAQMNPEFCMPVKDLVKNLRTAFKSF 341

[Close]

BLAST of Cp4.1LG04g07400 vs. TrEMBL
Match: B9GIQ5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s29400g PE=4 SV=2)

HSP 1 Score: 301.2 bits (770), Expect = 1.4e-78
Identity = 178/337 (52.82%), Postives = 224/337 (66.47%), Query Frame = 1


Query: 1   MEISSMMGFSEMGMEDSGFVNQWHKSSIDEISTLPLAAAFGENLQHSYAHTNLDHKASSN 60
           ME SS+    E+GMEDS F NQW  +S+D+ S LP AAAFGEN+ HS++H N + K S +
Sbjct: 1   METSSVTALCELGMEDSSFTNQWFMNSLDDTSLLPFAAAFGENIHHSFSHQNFNLKTSMD 60

Query: 61  HSQNAIFGYAKHLSSYQTANHSPNAHVVAYPTTSVSASNYTNQMDFTRPKEEVVCPQSIS 120
             +        HLS+ Q A  SPN         S   SN+ NQM   +PKEE VC +SI+
Sbjct: 61  SVRPTKQLRTDHLSNPQPA-FSPNI-------LSFVNSNHANQMGLMKPKEEAVCSKSIN 120

Query: 121 NIPSDMLISQGSLCHQSHLTKSDRGAKR-TAIKSRLPPAQDHILAERKRREKLSQRFIAL 180
           N+PSDM++SQ S  +Q +  K+ +G K  +A  +RL  +QDHI+AERKRREKLSQRFIAL
Sbjct: 121 NLPSDMVVSQDSFGNQYYAFKASQGPKMISANGTRLSQSQDHIIAERKRREKLSQRFIAL 180

Query: 181 SAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSRVFGDGNNT 240
           SA+VPGLKKMDKASVLGDAIKYLKQLQE+VK LEEQT+RK +ESVV VKKS V+ D    
Sbjct: 181 SAVVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRKTMESVVIVKKSHVYVDEGGE 240

Query: 241 SKTED-------EPLPEIEARSCDKNILIRIHCVKNKDVIEKTIAEIEKLHLTI------ 300
           + + D       E LPE+EAR CDK++LIRIHC KNK V+EKT+AE+EKLHL++      
Sbjct: 241 NSSSDVSKGPIHETLPELEARFCDKHVLIRIHCKKNKGVLEKTVAEVEKLHLSVINSSVL 300

Query: 301 --------------MDNEFRLSLKDLVKNLQSTLRSF 310
                         MD +F +S+KDLVK L S  + F
Sbjct: 301 TFGTCALDVTIIAQMDIDFNMSVKDLVKTLHSAFQYF 329

[Close]

BLAST of Cp4.1LG04g07400 vs. TrEMBL
Match: B9HN59_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s08500g PE=4 SV=2)

HSP 1 Score: 292.0 bits (746), Expect = 8.7e-76
Identity = 178/344 (51.74%), Postives = 225/344 (65.41%), Query Frame = 1


Query: 1   MEISSMMGFSEMGMEDSGFVNQWHKSSIDEISTLPLAAA-FGENLQHSYAHTNLDHKASS 60
           ME SS+    E+GMED GF NQW+ +S+D+IS LPLAAA FGEN+ H +++ N + K S 
Sbjct: 1   METSSITALYELGMEDPGFTNQWYMNSLDDISLLPLAAAAFGENVHHPFSNQNFNLKTSM 60

Query: 61  NHSQNAIFGYAK------HLSSYQTANHSPNAHVVAYPTTSVSASNYTNQMDFTRPKEEV 120
           + +  +I           HLS  Q+A  SPN      P       N+ NQM   +PKEE 
Sbjct: 61  DSTPTSINVRPTKQMKTFHLSDPQSA-FSPNFLSFVNP-------NHANQMGLVKPKEEA 120

Query: 121 VCPQSISNIPSDMLISQGSLCHQSHLTKSDRGAKRTAIKS-RLPPAQDHILAERKRREKL 180
           VC +SI+N PSDM++SQ     Q+++ K  +G +R +  + RL  +QDHI+AERKRREKL
Sbjct: 121 VCSKSINNFPSDMVVSQDIFGSQNYVIKGCQGPERISTNTPRLSQSQDHIIAERKRREKL 180

Query: 181 SQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSRV 240
           SQRFIALSA+VPGLKKMDKASVLGDAIKYLKQLQEKVK LEEQT+RK +ESVV VKKS +
Sbjct: 181 SQRFIALSAVVPGLKKMDKASVLGDAIKYLKQLQEKVKTLEEQTKRKTMESVVIVKKSHI 240

Query: 241 FGDGNNTSKTED-------EPLPEIEARSCDKNILIRIHCVKNKDVIEKTIAEIEKLHLT 300
           + D  + + + D       E LPEIEAR CDK++LIRIHC K K V+EKT+AEIEKLHL+
Sbjct: 241 YVDEGDVNASSDESKGPIHETLPEIEARFCDKHVLIRIHCEKRKGVLEKTVAEIEKLHLS 300

Query: 301 I--------------------MDNEFRLSLKDLVKNLQSTLRSF 310
           +                    MD +F +SLKDLVK L+S    F
Sbjct: 301 VINSSVLAFGTSALHVTFIAQMDIDFNMSLKDLVKTLRSAFEFF 336

[Close]

BLAST of Cp4.1LG04g07400 vs. TAIR10
Match: AT4G37850.1 (AT4G37850.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-37
Identity = 122/337 (36.20%), Postives = 179/337 (53.12%), Query Frame = 1


Query: 1   MEISSMMGFSEMGMEDSGFVNQWHKSSI-DEISTLPLAAAFGENLQHSYAHTNLDHKASS 60
           M I S   FSE  +E++  + Q+H +SI  E+              +  ++ +L      
Sbjct: 1   MSILSTRWFSEQEIEENSIIQQFHMNSIVGEVQEAQYIFPHSFTTNNDPSYDDLIEMKPP 60

Query: 61  NHSQNAIFGYAKHLSSYQTANHSPNAHVVAYPTTSVSASNYTNQMDFTRPKEEVVCPQSI 120
              +      + HL      N  P+ H+  + ++ + +       D     E    P  +
Sbjct: 61  KILETTYISPSSHLPP----NSKPH-HIHRHSSSRILSFEDYGSNDM----EHEYSPTYL 120

Query: 121 SNIPSDMLISQGSLCHQSHLTKSDRGAKRTAIKSRLPP-AQDHILAERKRREKLSQRFIA 180
           ++I S  L +Q    HQ     + +G KR    SR    AQDHI+AERKRREKL+QRF+A
Sbjct: 121 NSIFSPKLEAQVQP-HQKSDEFNRKGTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVA 180

Query: 181 LSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSRVFGDGNN 240
           LSA+VPGLKKMDKASVLGDA+K++K LQE+V  LEEQ + + +ES+V VKKS++  D NN
Sbjct: 181 LSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERRLESMVLVKKSKLILDDNN 240

Query: 241 TSKT-------EDEPLPEIEARSCDKNILIRIHCVKNKDVIEKTIAEIEKLHLTI----- 300
            S +        D  LPEIE R  D+++LI+I C K K  + K +AEIEKLH+ I     
Sbjct: 241 QSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSV 300

Query: 301 --------------MDNEFRLSLKDLVKNLQSTLRSF 310
                          +++F ++L D+VK+L+S L +F
Sbjct: 301 LNFGPTLDITIIAKKESDFDMTLMDVVKSLRSALSNF 327

[Close]

BLAST of Cp4.1LG04g07400 vs. TAIR10
Match: AT2G22750.2 (AT2G22750.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 147.1 bits (370), Expect = 1.8e-35
Identity = 104/253 (41.11%), Postives = 141/253 (55.73%), Query Frame = 1


Query: 81  HSPNAHVVAYPTTSVSASNYTNQMDFTRPKEEVVCPQSISNIPSDMLISQGSLCHQSHLT 140
           H P++ ++++  T +   N+ +      PK+E +    +       LI +G+   QS LT
Sbjct: 63  HQPSSRILSFEKTGLHVMNHNSPNLIFSPKDEEI---GLPEHKKAELIIRGTKRAQS-LT 122

Query: 141 KSDRGAKRTAIKSRLPPAQDHILAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIK 200
           +S   A            QDHILAERKRREKL+QRF+ALSA++PGLKKMDKASVLGDAIK
Sbjct: 123 RSQSNA------------QDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIK 182

Query: 201 YLKQLQEKVKILEEQTRRKDIESVVFVKKSRVF------------GDGNNTSKTEDEPLP 260
           ++K LQE VK  EEQ + K +ESVV VKKS +              DGN  S + +  LP
Sbjct: 183 HIKYLQESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSN--LP 242

Query: 261 EIEARSCDKNILIRIHCVKNKDVIEKTIAEIEKLHLTI-------------------MDN 303
           EIE R   K++LI+I C K K  + K + EIEKL L+I                    +N
Sbjct: 243 EIEVRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFGPTFDISIIAQKNN 297

[Close]

BLAST of Cp4.1LG04g07400 vs. TAIR10
Match: AT2G22770.1 (AT2G22770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-28
Identity = 79/189 (41.80%), Postives = 119/189 (62.96%), Query Frame = 1


Query: 159 QDHILAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQ--- 218
           ++H+LAERKRR+KL++R IALSA++PGLKK DKA+VL DAIK+LKQLQE+VK LEE+   
Sbjct: 131 KEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVV 190

Query: 219 TRRKDIESVVFVKKSRVFGDGNNT------------SKTEDE------PLPEIEARSCDK 278
           T++ D +S++ VK+S+V+ D +++            S + DE       +P IEAR  D+
Sbjct: 191 TKKMD-QSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARVSDR 250

Query: 279 NILIRIHCVKNKDVIEKTIAEIEKLH--------------------LTIMDNEFRLSLKD 307
           ++LIR+HC KNK  + K ++ +EK                      LT MDN+F   +++
Sbjct: 251 DLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVITILTKMDNKFSRPVEE 310

[Close]

BLAST of Cp4.1LG04g07400 vs. TAIR10
Match: AT2G22760.1 (AT2G22760.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 113.2 bits (282), Expect = 2.8e-25
Identity = 102/290 (35.17%), Postives = 148/290 (51.03%), Query Frame = 1


Query: 48  YAHTNLDHKASSNHS----QNAIFGYAKHLSSYQTANHSPNAHVVAYPTTSVSASNYTNQ 107
           Y   NL    S ++S    Q++ F +  H   ++     P A V   P   ++       
Sbjct: 22  YEENNLSPDESLSNSRRADQSSKFDHQMH---FECLREKPKAAVK--PMMKINNKQQLIS 81

Query: 108 MDFTRPKEEVVCPQSISNIPSDMLISQGSLCHQ-SHLTKSDRGAKRTAIKSRLPPAQDHI 167
            DF+     V+   +   I  D L+ +G+     SH T+S               A++H+
Sbjct: 82  FDFS---SNVISSPAAEEIIMDKLVGRGTKRKTCSHGTRSP------------VLAKEHV 141

Query: 168 LAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKIL-EEQTRRKDI 227
           LAERKRREKLS++FIALSA++PGLKK DK ++L DAI  +KQLQE+++ L EE+   + +
Sbjct: 142 LAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEATRQM 201

Query: 228 ESVVFVKKSRVFGDGN-NTSKTE------DEPLPEIEARSCDKNILIRIHCVKNKDVIEK 287
           ES++ VKKS+VF D   N S +       D+ LPEIEA+    +ILIRI C K+K  +  
Sbjct: 202 ESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDILIRILCEKSKGCMIN 261

Query: 288 TIAEIEKLHLTI--------------------MDNEFRLS-LKDLVKNLQ 304
            +  IE   L I                    MD +F +S LKDLV+NL+
Sbjct: 262 ILNTIENFQLRIENSIVLPFGDSTLDITVLAQMDKDFSMSILKDLVRNLR 291

[Close]

BLAST of Cp4.1LG04g07400 vs. TAIR10
Match: AT2G46510.1 (AT2G46510.1 ABA-inducible BHLH-type transcription factor)

HSP 1 Score: 77.0 bits (188), Expect = 2.2e-14
Identity = 75/275 (27.27%), Postives = 134/275 (48.73%), Query Frame = 1


Query: 40  FGENLQHSYAHT-------NLDHKASS------NHSQNAIFGYA------KHLSSYQTAN 99
           FG++L  ++A+        NLD + +       N+++   FGY       K L +     
Sbjct: 263 FGQDLSGAHAYPKKLEVRRNLDERFTPQSWEGYNNNKGPTFGYTPQRDDVKVLENVNMVV 322

Query: 100 HSPNAHV-VAYPTTSVSASNYTNQMDFTRPKEEVVCPQSISNIPSDMLISQGSLCHQSHL 159
            + N    + +  +SV+AS+  N    T+ ++   C +     P  +L   G +      
Sbjct: 323 DNNNYKTQIEFAGSSVAASS--NPSTNTQQEKSESCTEKR---PVSLLAGAGIVSVVDEK 382

Query: 160 TKSDRGAKRTAIKSRLPPAQDHILAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAI 219
               RG K      R  P  +H+ AER+RREKL+QRF AL ++VP + KMDKAS+LGDAI
Sbjct: 383 RPRKRGRKPA--NGREEPL-NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAI 442

Query: 220 KYLKQLQEKVKILEEQTRRKDIESVVFVKKSRVFGDGNNTSKTEDEPLPEIEARSCDKNI 279
            Y+K+LQEKVKI+E++           V   +   + N  +  E    PE++ ++ ++ +
Sbjct: 443 SYIKELQEKVKIMEDER----------VGTDKSLSESNTITVEES---PEVDIQAMNEEV 502

Query: 280 LIRIHCVKNKDVIEKTIAEIEKLHLTIMDNEFRLS 295
           ++R+    +     + I  +   ++++M+ +  L+
Sbjct: 503 VVRVISPLDSHPASRIIQAMRNSNVSLMEAKLSLA 516

[Close]

BLAST of Cp4.1LG04g07400 vs. NCBI nr
Match: gi|659110183|ref|XP_008455093.1| (PREDICTED: transcription factor bHLH18-like isoform X2 [Cucumis melo])

HSP 1 Score: 478.8 bits (1231), Expect = 7.2e-132
Identity = 257/334 (76.95%), Postives = 276/334 (82.63%), Query Frame = 1


Query: 1   MEISSMMGFSEMGMEDSGFVNQWHKSSIDEISTLPLAAAFGENLQHSYAHTNLDHKASSN 60
           ME SSM+ FSEMGMED+GFVNQWHKSS+D++   PLAAAFGENLQHSYA TN+D KAS N
Sbjct: 1   MEKSSMVVFSEMGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYAQTNIDQKASLN 60

Query: 61  HSQNAIFGYAKHL-----SSYQTANHSPNAHVVAYPTTSVSASNYTNQMDFTRPKEEVVC 120
           HS NAI GY K L     SSYQT NH PN+ VVAYPT SVSASNYTNQMDFTRPKEEVVC
Sbjct: 61  HSHNAILGYVKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYTNQMDFTRPKEEVVC 120

Query: 121 PQSISNIPSDMLISQGSLCHQSHLTKSDRGAKRTAIKSRLPPAQDHILAERKRREKLSQR 180
           PQSISN+PSDMLISQGSL HQSH TKS+RG +  +  SR+P AQDHILAER+RREKLSQR
Sbjct: 121 PQSISNLPSDMLISQGSLAHQSHTTKSNRGTRSPSTNSRIPQAQDHILAERRRREKLSQR 180

Query: 181 FIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSRVFGD 240
           FIALSAI+PGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKS VF D
Sbjct: 181 FIALSAIIPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSHVFAD 240

Query: 241 GNNTSKTEDEPLPEIEARSCDKNILIRIHCVKNKDVIEKTIAEIEKLHLTI--------- 300
           GN+TSK EDEPLPEIEAR CDKN+LIRIHC K KDVIE+T+AEIEKLHL I         
Sbjct: 241 GNDTSKEEDEPLPEIEARFCDKNVLIRIHCEKKKDVIERTVAEIEKLHLIIVNSSVMSFG 300

Query: 301 -----------MDNEFRLSLKDLVKNLQSTLRSF 310
                      MDNEF L+LKDLVKNLQSTLR F
Sbjct: 301 SLAFDITIIAQMDNEFCLTLKDLVKNLQSTLRLF 334

[Close]

BLAST of Cp4.1LG04g07400 vs. NCBI nr
Match: gi|778724706|ref|XP_011658851.1| (PREDICTED: transcription factor bHLH25-like [Cucumis sativus])

HSP 1 Score: 470.7 bits (1210), Expect = 2.0e-129
Identity = 255/334 (76.35%), Postives = 274/334 (82.04%), Query Frame = 1


Query: 1   MEISSMMGFSEMGMEDSGFVNQWHKSSIDEISTLPLAAAFGENLQHSYAHTNLDHKASSN 60
           ME SSM+ FSEMGMED+GFVNQWHKSS+D++   PLAAAFGENLQHSY  +N+D KAS N
Sbjct: 1   MEKSSMVVFSEMGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNIDQKASLN 60

Query: 61  HSQNAIFGYAKHL-----SSYQTANHSPNAHVVAYPTTSVSASNYTNQMDFTRPKEEVVC 120
           HS NAI GY K L     SSYQT NH PN+ VVAYPT SVSASNY NQMDF+RPKEEVVC
Sbjct: 61  HSHNAILGYMKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRPKEEVVC 120

Query: 121 PQSISNIPSDMLISQGSLCHQSHLTKSDRGAKRTAIKSRLPPAQDHILAERKRREKLSQR 180
           PQSISN+PSDMLISQ SL HQSH TKS+RG +  +  SR+P AQDHILAER+RREKLSQR
Sbjct: 121 PQSISNLPSDMLISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRREKLSQR 180

Query: 181 FIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSRVFGD 240
           FIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKS VF D
Sbjct: 181 FIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSHVFPD 240

Query: 241 GNNTSKTEDEPLPEIEARSCDKNILIRIHCVKNKDVIEKTIAEIEKLHLTI--------- 300
           GN+TSK EDEPLPEIEAR CDKN+LIRIHC K KD+IEKTIAEIE LHLTI         
Sbjct: 241 GNDTSKEEDEPLPEIEARICDKNVLIRIHCEKKKDIIEKTIAEIENLHLTIVNSSVMSFG 300

Query: 301 -----------MDNEFRLSLKDLVKNLQSTLRSF 310
                      MDNEF L+LKDLVKNLQSTLRSF
Sbjct: 301 SLALDITIIAQMDNEFCLTLKDLVKNLQSTLRSF 334

[Close]

BLAST of Cp4.1LG04g07400 vs. NCBI nr
Match: gi|659110181|ref|XP_008455092.1| (PREDICTED: transcription factor bHLH18-like isoform X1 [Cucumis melo])

HSP 1 Score: 465.3 bits (1196), Expect = 8.3e-128
Identity = 248/322 (77.02%), Postives = 266/322 (82.61%), Query Frame = 1


Query: 13  GMEDSGFVNQWHKSSIDEISTLPLAAAFGENLQHSYAHTNLDHKASSNHSQNAIFGYAKH 72
           GMED+GFVNQWHKSS+D++   PLAAAFGENLQHSYA TN+D KAS NHS NAI GY K 
Sbjct: 19  GMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYAQTNIDQKASLNHSHNAILGYVKQ 78

Query: 73  L-----SSYQTANHSPNAHVVAYPTTSVSASNYTNQMDFTRPKEEVVCPQSISNIPSDML 132
           L     SSYQT NH PN+ VVAYPT SVSASNYTNQMDFTRPKEEVVCPQSISN+PSDML
Sbjct: 79  LKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYTNQMDFTRPKEEVVCPQSISNLPSDML 138

Query: 133 ISQGSLCHQSHLTKSDRGAKRTAIKSRLPPAQDHILAERKRREKLSQRFIALSAIVPGLK 192
           ISQGSL HQSH TKS+RG +  +  SR+P AQDHILAER+RREKLSQRFIALSAI+PGLK
Sbjct: 139 ISQGSLAHQSHTTKSNRGTRSPSTNSRIPQAQDHILAERRRREKLSQRFIALSAIIPGLK 198

Query: 193 KMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSRVFGDGNNTSKTEDEPL 252
           KMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKS VF DGN+TSK EDEPL
Sbjct: 199 KMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSHVFADGNDTSKEEDEPL 258

Query: 253 PEIEARSCDKNILIRIHCVKNKDVIEKTIAEIEKLHLTI--------------------M 310
           PEIEAR CDKN+LIRIHC K KDVIE+T+AEIEKLHL I                    M
Sbjct: 259 PEIEARFCDKNVLIRIHCEKKKDVIERTVAEIEKLHLIIVNSSVMSFGSLAFDITIIAQM 318

[Close]

BLAST of Cp4.1LG04g07400 vs. NCBI nr
Match: gi|700188583|gb|KGN43816.1| (hypothetical protein Csa_7G069180 [Cucumis sativus])

HSP 1 Score: 457.2 bits (1175), Expect = 2.3e-125
Identity = 246/322 (76.40%), Postives = 264/322 (81.99%), Query Frame = 1


Query: 13  GMEDSGFVNQWHKSSIDEISTLPLAAAFGENLQHSYAHTNLDHKASSNHSQNAIFGYAKH 72
           GMED+GFVNQWHKSS+D++   PLAAAFGENLQHSY  +N+D KAS NHS NAI GY K 
Sbjct: 19  GMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNIDQKASLNHSHNAILGYMKQ 78

Query: 73  L-----SSYQTANHSPNAHVVAYPTTSVSASNYTNQMDFTRPKEEVVCPQSISNIPSDML 132
           L     SSYQT NH PN+ VVAYPT SVSASNY NQMDF+RPKEEVVCPQSISN+PSDML
Sbjct: 79  LKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRPKEEVVCPQSISNLPSDML 138

Query: 133 ISQGSLCHQSHLTKSDRGAKRTAIKSRLPPAQDHILAERKRREKLSQRFIALSAIVPGLK 192
           ISQ SL HQSH TKS+RG +  +  SR+P AQDHILAER+RREKLSQRFIALSAIVPGLK
Sbjct: 139 ISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRREKLSQRFIALSAIVPGLK 198

Query: 193 KMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSRVFGDGNNTSKTEDEPL 252
           KMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKS VF DGN+TSK EDEPL
Sbjct: 199 KMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSHVFPDGNDTSKEEDEPL 258

Query: 253 PEIEARSCDKNILIRIHCVKNKDVIEKTIAEIEKLHLTI--------------------M 310
           PEIEAR CDKN+LIRIHC K KD+IEKTIAEIE LHLTI                    M
Sbjct: 259 PEIEARICDKNVLIRIHCEKKKDIIEKTIAEIENLHLTIVNSSVMSFGSLALDITIIAQM 318

[Close]

BLAST of Cp4.1LG04g07400 vs. NCBI nr
Match: gi|595793205|ref|XP_007200351.1| (hypothetical protein PRUPE_ppa008130mg [Prunus persica])

HSP 1 Score: 309.7 bits (792), Expect = 5.8e-81
Identity = 184/343 (53.64%), Postives = 230/343 (67.06%), Query Frame = 1


Query: 1   MEISSMMGFSEMGMEDSGFVNQWHKSSIDEISTLPLAAAFGENLQHSYAHTNLDHKASSN 60
           MEISS+ G SE+GMED  F+NQWH +S+DE+S LPLAA FGEN   S+ H N + K S +
Sbjct: 1   MEISSIGGMSELGMEDPYFINQWHMNSLDEVSMLPLAAPFGENFNQSHFHPNFNLKTSMD 60

Query: 61  HSQNAIFGYAKHL-----SSYQTANHSPNAHVVAYPTT-SVSASNYTNQMDFTRPKEEV- 120
              + I    K L     SS +T  H  N  V + P   S   SN TNQM   +PKEE  
Sbjct: 61  SCHSGIDRPMKQLKTDGWSSCKTDQHGSNPQVASSPNILSFVNSNSTNQMGVLKPKEEAA 120

Query: 121 VCPQSISNIPSDMLISQGSLCHQSHLTKSDRGAKRTAIKSRLPPAQDHILAERKRREKLS 180
           VC +S +++PSD+L+SQ S  +QS+L K+ +G KR    +RL   QDHI+AERKRREKLS
Sbjct: 121 VCSKSNNSLPSDILLSQSSFGNQSYLFKASQGTKRVNTNTRLSTTQDHIIAERKRREKLS 180

Query: 181 QRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSRVF 240
           QRFIALSA+VPGLKKMDKASVLGDAIKY+KQLQ+KVK LEEQTR+K++ESVVFVKK+++F
Sbjct: 181 QRFIALSAMVPGLKKMDKASVLGDAIKYIKQLQDKVKTLEEQTRKKNMESVVFVKKTQLF 240

Query: 241 GDGNNTSKTE-------DEPLPEIEARSCDKNILIRIHCVKNKDVIEKTIAEIEKLHLTI 300
            + +N+S  E       +E LPEIEAR CD N++IRIHC K K V+EKTIAE+EKL L  
Sbjct: 241 ANDDNSSSEENNSSGPFEETLPEIEARFCDNNVMIRIHCEKRKGVVEKTIAEVEKLQLKF 300

Query: 301 --------------------MDNEFRLSLKDLVKNLQSTLRSF 310
                               M+ EF LS+K+LVKNL+S    F
Sbjct: 301 INSSVLTFGGCALDVTIIAQMEVEFSLSVKELVKNLRSAFDMF 343

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g07400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH025_ARATH	2.6e-36	36.20	Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2 SV=2	[more]
BH018_ARATH	3.1e-34	41.11	Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2 SV=1	[more]
BH020_ARATH	2.8e-27	41.80	Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1	[more]
BH019_ARATH	5.0e-24	35.17	Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2 SV=1	[more]
BHLHW_PEA	1.4e-13	27.20	Basic helix-loop-helix protein A OS=Pisum sativum GN=BHLH PE=3 SV=1	[more]

BLAST of Cp4.1LG04g07400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7M3_CUCSA	1.6e-125	76.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G069180 PE=4 SV=1	[more]
M5W438_PRUPE	4.1e-81	53.64	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008130mg PE=4 SV=1	[more]
A0A059ASU8_EUCGR	8.5e-79	50.15	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02518 PE=4 SV=1	[more]
B9GIQ5_POPTR	1.4e-78	52.82	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s29400g PE=4 SV=2	[more]
B9HN59_POPTR	8.7e-76	51.74	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s08500g PE=4 SV=2	[more]

BLAST of Cp4.1LG04g07400 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37850.1	1.4e-37	36.20	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22750.2	1.8e-35	41.11	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22770.1	1.6e-28	41.80	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22760.1	2.8e-25	35.17	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G46510.1	2.2e-14	27.27	ABA-inducible BHLH-type transcription factor	[more]

BLAST of Cp4.1LG04g07400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110183\|ref\|XP_008455093.1\|	7.2e-132	76.95	PREDICTED: transcription factor bHLH18-like isoform X2 [Cucumis melo]	[more]
gi\|778724706\|ref\|XP_011658851.1\|	2.0e-129	76.35	PREDICTED: transcription factor bHLH25-like [Cucumis sativus]	[more]
gi\|659110181\|ref\|XP_008455092.1\|	8.3e-128	77.02	PREDICTED: transcription factor bHLH18-like isoform X1 [Cucumis melo]	[more]
gi\|700188583\|gb\|KGN43816.1\|	2.3e-125	76.40	hypothetical protein Csa_7G069180 [Cucumis sativus]	[more]
gi\|595793205\|ref\|XP_007200351.1\|	5.8e-81	53.64	hypothetical protein PRUPE_ppa008130mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g07400.1	Cp4.1LG04g07400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 160..217 score: 1.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 160..206 score: 4.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 162..211 score: 2.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 156..205 score: 15
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 161..219 score: 9.42
None	No IPR available	unknown	Coil	Coil	coord: 195..222 scor
None	No IPR available	PANTHER	PTHR23042	CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS	coord: 1..56 score: 8.7E-95coord: 119..306 score: 8.7
None	No IPR available	PANTHER	PTHR23042:SF61	TRANSCRIPTION FACTOR BHLH18-RELATED	coord: 1..56 score: 8.7E-95coord: 119..306 score: 8.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG04g07400	Cucsa.218800	Cucumber (Gy14) v1	cgycpeB0602
Cp4.1LG04g07400	CmaCh19G005130	Cucurbita maxima (Rimu)	cmacpeB539
Cp4.1LG04g07400	CmoCh11G014410	Cucurbita moschata (Rifu)	cmocpeB126
Cp4.1LG04g07400	CmoCh19G005260	Cucurbita moschata (Rifu)	cmocpeB494
Cp4.1LG04g07400	Csa7G069180	Cucumber (Chinese Long) v2	cpecuB695
Cp4.1LG04g07400	MELO3C018555	Melon (DHL92) v3.5.1	cpemeB604
Cp4.1LG04g07400	ClCG02G007480	Watermelon (Charleston Gray)	cpewcgB590
Cp4.1LG04g07400	CSPI07G06490	Wild cucumber (PI 183967)	cpecpiB697
Cp4.1LG04g07400	Lsi03G006440	Bottle gourd (USVL1VR-Ls)	cpelsiB543
Cp4.1LG04g07400	MELO3C018555.2	Melon (DHL92) v3.6.1	cpemedB715
Cp4.1LG04g07400	CsaV3_7G007460	Cucumber (Chinese Long) v3	cpecucB0868
Cp4.1LG04g07400	Bhi05G000827	Wax gourd	cpewgoB0856
Cp4.1LG04g07400	CsGy7G006120	Cucumber (Gy14) v2	cgybcpeB969
Cp4.1LG04g07400	Carg23051	Silver-seed gourd	carcpeB1033
Cp4.1LG04g07400	Carg16309	Silver-seed gourd	carcpeB0639

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG04g07400	Cp4.1LG15g04040	Cucurbita pepo (Zucchini)	cpecpeB269

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG04g07400	Cucurbita pepo (Zucchini)	cpecpeB400
Cp4.1LG04g07400	Cucurbita maxima (Rimu)	cmacpeB154
Cp4.1LG04g07400	Cucurbita maxima (Rimu)	cmacpeB749
Cp4.1LG04g07400	Cucurbita moschata (Rifu)	cmocpeB321
Cp4.1LG04g07400	Cucurbita moschata (Rifu)	cmocpeB703
Cp4.1LG04g07400	Bottle gourd (USVL1VR-Ls)	cpelsiB548
Cp4.1LG04g07400	Melon (DHL92) v3.6.1	cpemedB769
Cp4.1LG04g07400	Silver-seed gourd	carcpeB0409
Cp4.1LG04g07400	Silver-seed gourd	carcpeB0529