Cp4.1LG04g07340 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG04g07340
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG04 : 4195952 .. 4196997 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTTTGCAGGTTAGTTTGAAAAAGAATTAAATTCAAGCCGCTTTCGGCTACGTCTTTGCTCCTACCGACGAAGAATTATTGATGTATAATCTTTTCCACAAAATTGTTGGAGAAACCGTTCCACCAACTGCTCTTCCTGTGATTGATCTTTACACACAAGAGCCATCTCTAATATGACAACAATGTGGAGGAATCGATAATAAAGAAATCTACCTCTTCACAACGTCAATGGGAAGAAATCTCGTGTCGTTAGAAAAGTTGGCTCTAATGGTGCCACTTGGAGCTTTGGAGCGGTGAAAACAAAGGTCAACGAGTATTTTTATTGGTTAATAATGTCTAATTGGTACTATCAAACGGTTTCATTACGAGACTCCTAAAGACAAAGCTAATGACAATGATTGTTCTTGGATCATGCGAGAGTACACAATTGATCATACTTTCATACCTAAAGAATTCATGGATGATTCCTACGTACTCTCTACTCTGCGTAATTCAAAGAAAGACCTTAAAAAAGGTAAAAAATGCTCGACAAGAATACAAAAATCATTTGTCTCAAACTGCCCAACAACAACAACTACAACAATGCATACATATATTGATCAAAATTTTAATGCATACATATATTGATCAAAATTCTAAACTACAACAAATTACTCCCAACATAAATGTTAGGTATCATTTCTTAACGGGCTAGTATATTTTTATTTTATAATTGGCTTTACAAAATAATTTAATTTTGTTTGTATGAATTTATTTATTTTTTAACCATGTTCAGTTTTTTTTTATTTTTTTATTTTTTTATTATTTTATTATTTTTGGGTAGTCCAGTCCACATGCACAAATATTGGAATCTAATCATCAATTTTCAAATGATGATAAGATGTTTGCAGTTTGAAAAAGAATTAAATTCAAGCCACTCCCGTTCGGCTGCGTCCTCGCTCTTACTGACGAAGAATTATTGACCTATTATCTTGTCCACAAGATTGTTGGAGAAACCGTTCCACCAATTGCGCTCCCTGTGATCGATCTTTACACACAATAG

mRNA sequence

ATGATAAATCTACCTCTTCACAACGTCAATGGGAAGAAATCTCGTGTCGTTAGAAAAGTTGGCTCTAATGGTGCCACTTGGAGCTTTGGAGCGGTGAAAACAAAGGTCAACGAGTATTTTTATTGGTTAATAATGTCTAATTGGTACTATCAAACGACAAAGCTAATGACAATGATTGTTCTTGGATCATGCGAGAGTACACAATTGATCATACTTTCATACCTAAAGAATTCATGGATGATTCCTACGTACTCTCTACTCTGCGTAATTCAAAGAAAGACCTTAAAAAAGGTAAAAAATGCTCGACAAGAATACAAAAATCATTTGTCTCAAACTGCCCAACAACAACAACTACAACAATGCATACATATATTGATCAAAATTTTAATGCATACATATATTGATCAAAATTCTAAACTACAACAAATTACTCCCAACATAAATTCCAGTCCACATGCACAAATATTGGAATCTAATCATCAATTTTCAAATGATGATAAGATAATTAAATTCAAGCCACTCCCGTTCGGCTGCGTCCTCGCTCTTACTGACGAAGAATTATTGACCTATTATCTTGTCCACAAGATTGTTGGAGAAACCGTTCCACCAATTGCGCTCCCTGTGATCGATCTTTACACACAATAG

Coding sequence (CDS)

ATGATAAATCTACCTCTTCACAACGTCAATGGGAAGAAATCTCGTGTCGTTAGAAAAGTTGGCTCTAATGGTGCCACTTGGAGCTTTGGAGCGGTGAAAACAAAGGTCAACGAGTATTTTTATTGGTTAATAATGTCTAATTGGTACTATCAAACGACAAAGCTAATGACAATGATTGTTCTTGGATCATGCGAGAGTACACAATTGATCATACTTTCATACCTAAAGAATTCATGGATGATTCCTACGTACTCTCTACTCTGCGTAATTCAAAGAAAGACCTTAAAAAAGGTAAAAAATGCTCGACAAGAATACAAAAATCATTTGTCTCAAACTGCCCAACAACAACAACTACAACAATGCATACATATATTGATCAAAATTTTAATGCATACATATATTGATCAAAATTCTAAACTACAACAAATTACTCCCAACATAAATTCCAGTCCACATGCACAAATATTGGAATCTAATCATCAATTTTCAAATGATGATAAGATAATTAAATTCAAGCCACTCCCGTTCGGCTGCGTCCTCGCTCTTACTGACGAAGAATTATTGACCTATTATCTTGTCCACAAGATTGTTGGAGAAACCGTTCCACCAATTGCGCTCCCTGTGATCGATCTTTACACACAATAG

Protein sequence

MINLPLHNVNGKKSRVVRKVGSNGATWSFGAVKTKVNEYFYWLIMSNWYYQTTKLMTMIVLGSCESTQLIILSYLKNSWMIPTYSLLCVIQRKTLKKVKNARQEYKNHLSQTAQQQQLQQCIHILIKILMHTYIDQNSKLQQITPNINSSPHAQILESNHQFSNDDKIIKFKPLPFGCVLALTDEELLTYYLVHKIVGETVPPIALPVIDLYTQ
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g07340.1Cp4.1LG04g07340.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 95..115
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g07340Cucurbita pepo (Zucchini)cpecpeB269
Cp4.1LG04g07340Cucurbita pepo (Zucchini)cpecpeB400
Cp4.1LG04g07340Cucumber (Gy14) v1cgycpeB0601
Cp4.1LG04g07340Cucumber (Gy14) v1cgycpeB0602
Cp4.1LG04g07340Cucurbita maxima (Rimu)cmacpeB154
Cp4.1LG04g07340Cucurbita maxima (Rimu)cmacpeB539
Cp4.1LG04g07340Cucurbita maxima (Rimu)cmacpeB749
Cp4.1LG04g07340Cucurbita moschata (Rifu)cmocpeB126
Cp4.1LG04g07340Cucurbita moschata (Rifu)cmocpeB321
Cp4.1LG04g07340Cucurbita moschata (Rifu)cmocpeB494
Cp4.1LG04g07340Cucurbita moschata (Rifu)cmocpeB703
Cp4.1LG04g07340Wild cucumber (PI 183967)cpecpiB696
Cp4.1LG04g07340Wild cucumber (PI 183967)cpecpiB697
Cp4.1LG04g07340Cucumber (Chinese Long) v2cpecuB694
Cp4.1LG04g07340Cucumber (Chinese Long) v2cpecuB695
Cp4.1LG04g07340Bottle gourd (USVL1VR-Ls)cpelsiB543
Cp4.1LG04g07340Bottle gourd (USVL1VR-Ls)cpelsiB548
Cp4.1LG04g07340Watermelon (Charleston Gray)cpewcgB576
Cp4.1LG04g07340Watermelon (97103) v1cpewmB627
Cp4.1LG04g07340Melon (DHL92) v3.5.1cpemeB604
Cp4.1LG04g07340Melon (DHL92) v3.5.1cpemeB614
Cp4.1LG04g07340Cucumber (Gy14) v2cgybcpeB967
Cp4.1LG04g07340Cucumber (Gy14) v2cgybcpeB969
Cp4.1LG04g07340Melon (DHL92) v3.6.1cpemedB715
Cp4.1LG04g07340Melon (DHL92) v3.6.1cpemedB726
Cp4.1LG04g07340Melon (DHL92) v3.6.1cpemedB769
Cp4.1LG04g07340Silver-seed gourdcarcpeB0409
Cp4.1LG04g07340Silver-seed gourdcarcpeB0529
Cp4.1LG04g07340Silver-seed gourdcarcpeB1033
Cp4.1LG04g07340Cucumber (Chinese Long) v3cpecucB0867
Cp4.1LG04g07340Cucumber (Chinese Long) v3cpecucB0868
Cp4.1LG04g07340Wax gourdcpewgoB0856