Cp4.1LG04g07300 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g07300
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Unknown protein
Location	Cp4.1LG04 : 4195107 .. 4195786 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTTTGTAAGTCAGTTTGAAAAACAATTAAATTCAGGCCGCTCTCGATCGGCTACGTCTTTGCTCCTACCGACGAAGAATTATTGACCTATTATCTTTTCCACAAAATTGTTGGAGAAACCGTTCCACCAACTGCGCTTCCTGTGATTAATCTTTACACACAACAGCCATCTCTAATATGGCAACAATGTGGAGGGATCGATAATAAAGAAATCTACCTCTTCACAACTTCAATGGGAAGAAATCTCGTGTCATTACAAAAGTTGGCTCGAATGGTGCCACTGGGAGCGGTGAAAACAAAGGTCAACGAGTATTTTCTTCGGTTAATAATGTTCTAATTTGGTACTATCAAACGGTTTCATTACGAGACTCCTAAAGACAAAGCTAATGTCAATGATTGTTCTTGGATCATGCGGGAGTACACAATTGATCCTACTTTCATACCAAAAGTGTTCGTGTATGATTTCTATGTACTTTGTGCGATTCGAAGAAGGATGTTAAGAAACGAAAAAAATGCAGTCTCGACAAGAATACAAAAATCATTTGCCTCAAACTGCCCAACAACCACCACCACTACATTGCACACATATATGATCAAAATTCGGAACTACAAAAAATCACTCAATGTTACGTACATTTCTTATGACAGAAGCCATCTATTTTTATTTTATAATTGA

mRNA sequence

ATGATGCCGCTCTCGATCGGCTACGTCTTTGCTCCTACCGACGAAGAATTATTGACCTATTATCTTTTCCACAAAATTGTTGGAGAAACCGTTCCACCAACTGCGCTTCCTGTGATTAATCTTTACACACAACAGCCATCTCTAATATGGCAACAATGTGGAGGGATCGATAATAAAGAAATCTACCTCTTCACAACTTCAATGGGAAGAAATCTCGTGTCATTACAAAAGTTGGCTCGAATGGTGCCACTGGGAGCGGTGAAAACAAAGACTCCTAAAGACAAAGCTAATGTCAATGATTGTTCTTGGATCATGCGGGAGTACACAATTGATCCTACTTTCATACCAAAAGTGTTCGTGTATGATTTCTATGTACTTTGTGCGATTCGAAGAAGGATGTTAAGAAACGAAAAAAATGCAGTCTCGACAAGAATACAAAAATCATTTGCCTCAAACTGCCCAACAACCACCACCACTACATTGCACACATATATGATCAAAATTCGGAACTACAAAAAATCACTCAATGTTACGTACATTTCTTATGACAGAAGCCATCTATTTTTATTTTATAATTGA

Coding sequence (CDS)

ATGATGCCGCTCTCGATCGGCTACGTCTTTGCTCCTACCGACGAAGAATTATTGACCTATTATCTTTTCCACAAAATTGTTGGAGAAACCGTTCCACCAACTGCGCTTCCTGTGATTAATCTTTACACACAACAGCCATCTCTAATATGGCAACAATGTGGAGGGATCGATAATAAAGAAATCTACCTCTTCACAACTTCAATGGGAAGAAATCTCGTGTCATTACAAAAGTTGGCTCGAATGGTGCCACTGGGAGCGGTGAAAACAAAGACTCCTAAAGACAAAGCTAATGTCAATGATTGTTCTTGGATCATGCGGGAGTACACAATTGATCCTACTTTCATACCAAAAGTGTTCGTGTATGATTTCTATGTACTTTGTGCGATTCGAAGAAGGATGTTAAGAAACGAAAAAAATGCAGTCTCGACAAGAATACAAAAATCATTTGCCTCAAACTGCCCAACAACCACCACCACTACATTGCACACATATATGATCAAAATTCGGAACTACAAAAAATCACTCAATGTTACGTACATTTCTTATGACAGAAGCCATCTATTTTTATTTTATAATTGA

Protein sequence

MMPLSIGYVFAPTDEELLTYYLFHKIVGETVPPTALPVINLYTQQPSLIWQQCGGIDNKEIYLFTTSMGRNLVSLQKLARMVPLGAVKTKTPKDKANVNDCSWIMREYTIDPTFIPKVFVYDFYVLCAIRRRMLRNEKNAVSTRIQKSFASNCPTTTTTTLHTYMIKIRNYKKSLNVTYISYDRSHLFLFYN

Homology

[Close]

BLAST of Cp4.1LG04g07300 vs. TrEMBL
Match: A0A0A0L807_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110040 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-23
Identity = 65/186 (34.95%), Postives = 99/186 (53.23%), Query Frame = 1


Query: 4   LSIGYVFAPTDEELLTYYLFHKI--VGETVPPTALPVINLYTQQPSLIWQQCGGIDNKEI 63
           L +GY+F PTDEELL YYL+HKI  VG  +PP  LPV+++YT++ S IWQQC G+  +++
Sbjct: 6   LPMGYIFCPTDEELLCYYLYHKITIVGGFIPPIMLPVVDIYTKESSQIWQQCRGVHGQDV 65

Query: 64  YLFTTSMGRNLVSLQKLARMVPLGAV---------------------------KTKTPKD 123
           + F     +   +++K+    P GA+                             K  KD
Sbjct: 66  HFFICLKKKKSCAVRKVG---PNGAIWSGESKATKVFSHNNTLVGAFKLFHYENPKMKKD 125

Query: 124 KANVNDCSWIMREYTIDPTFIPKVFVYDFYVLCAIRRRMLRNEKNAVSTRIQKSFASNCP 161
             + N+ SWIM EYT+ P  +P+  V+  +VL  +R+++L+ +K A S   Q     + P
Sbjct: 126 GHHNNNYSWIMYEYTLHPNLVPEGVVHHSFVLFMLRKKILKQDKRAFSATKQTFSCIDWP 185

[Close]

BLAST of Cp4.1LG04g07300 vs. TrEMBL
Match: A0A0A0LWA5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G224380 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-23
Identity = 75/216 (34.72%), Postives = 107/216 (49.54%), Query Frame = 1


Query: 6   IGYVFAPTDEELLTYYLFHKIVGETVPPTALPVINLYTQQPSLIWQQCGGIDNKEIYLFT 65
           +GY F PTDEELL YYL+HK+VG  VPP  L V+++YT++P  IWQQCGG+D ++++ FT
Sbjct: 1   MGYTFCPTDEELLCYYLYHKVVGGFVPPIMLSVVDIYTKEPPQIWQQCGGVDGQDVHFFT 60

Query: 66  TSMGRNLVSLQKLARMVPLGAV---------------------------KTKTPKDKANV 125
               +    ++K+    P GA                              K  K   + 
Sbjct: 61  CLKKKKSRVVRKVG---PNGATWSGESKATKVFSHNNTLVGDFKRFHYENPKMKKGGHHN 120

Query: 126 NDCSWIMREYTIDPTFIPKVFVYDFYVLCAIRRRMLRNEKNAVSTRIQKSFASNCPTTT- 185
           N+ SWIM EYT+ P  +P+  V+  +VL  +R+++L+ +K A S   Q S   + P TT 
Sbjct: 121 NNYSWIMYEYTLHPNLVPEGVVHHSFVLFMLRKKILKQDKRAFSAIKQTSSCLDWPNTTK 180

Query: 186 -TTTLHTYMIKIRNYKKSLNVTYISYDRSHLFLFYN 193
            TTT     I   N K+      I  DR     F N
Sbjct: 181 ATTTQLEVHIDDLNTKRRRVEEQICIDRVEDDCFIN 213

[Close]

BLAST of Cp4.1LG04g07300 vs. TrEMBL
Match: V4S8B0_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10013622mg PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.0e-09
Identity = 51/179 (28.49%), Postives = 84/179 (46.93%), Query Frame = 1


Query: 3   PLSIGYVFAPTDEELLTYYLFHKIVGETVP--PTALPVINLY-TQQPSLIWQQCGGID-- 62
           PL +G  F P+D +L+ +YLF+KI G   P     +   NLY  ++P  IW+Q GG D  
Sbjct: 4   PLPLGCKFQPSDGQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGGHDLE 63

Query: 63  -NKEIYLFTTSMGRNLVSLQKLARMVPLGA----------------------VKTKTPKD 122
             +++Y FT  + +  V+  ++ R V  G                        + +  KD
Sbjct: 64  DGEDLYFFT-HLKKKSVNSSRIDRRVGTGTWQGEDVGKAVVSRNSRKKIGSKKRFRYEKD 123

Query: 123 KANVNDCSWIMREYTIDPTFIPKVFVYDFYVLCAIRRRMLRNEKNAVSTRIQKSFASNC 154
           K+  N C WIM EY+++P+ +P+       VLC IR+ + +  K  +     +S +  C
Sbjct: 124 KSPHNGC-WIMHEYSLNPSLLPQNLQSSDLVLCRIRKNVGKENKRRMENEESQSRSYKC 180

[Close]

BLAST of Cp4.1LG04g07300 vs. TrEMBL
Match: A0A067DD92_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g047622mg PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.7e-08
Identity = 49/157 (31.21%), Postives = 76/157 (48.41%), Query Frame = 1


Query: 3   PLSIGYVFAPTDEELLTYYLFHKIVGETVP--PTALPVINLY-TQQPSLIWQQCGG---I 62
           PL +G  F P+DE L+ +YLF+KI G   P     +   NLY  ++P  IW+Q GG    
Sbjct: 7   PLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLE 66

Query: 63  DNKEIYLFTTSMGRNLVSLQKLARMVPLGA----------------------VKTKTPKD 122
           D +++Y F T + +  V+  ++ R V  G                        + +  KD
Sbjct: 67  DGEDLYFF-TPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKD 126

Query: 123 KANVNDCSWIMREYTIDPTFIPKVFVYDFYVLCAIRR 132
           K+  N C WIM EY+++P+ +P+       VLC IR+
Sbjct: 127 KSPHNGC-WIMHEYSLNPSLLPQNLRSSDLVLCRIRK 161

[Close]

BLAST of Cp4.1LG04g07300 vs. TrEMBL
Match: V4SSL0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013691mg PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.7e-08
Identity = 49/157 (31.21%), Postives = 76/157 (48.41%), Query Frame = 1


Query: 3   PLSIGYVFAPTDEELLTYYLFHKIVGETVP--PTALPVINLY-TQQPSLIWQQCGG---I 62
           PL +G  F P+DE L+ +YLF+KI G   P     +   NLY  ++P  IW+Q GG    
Sbjct: 7   PLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLE 66

Query: 63  DNKEIYLFTTSMGRNLVSLQKLARMVPLGA----------------------VKTKTPKD 122
           D +++Y F T + +  V+  ++ R V  G                        + +  KD
Sbjct: 67  DGEDLYFF-TPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKD 126

Query: 123 KANVNDCSWIMREYTIDPTFIPKVFVYDFYVLCAIRR 132
           K+  N C WIM EY+++P+ +P+       VLC IR+
Sbjct: 127 KSPHNGC-WIMHEYSLNPSLLPQNLRSSDLVLCRIRK 161

[Close]

BLAST of Cp4.1LG04g07300 vs. TAIR10
Match: AT1G65910.1 (AT1G65910.1 NAC domain containing protein 28)

HSP 1 Score: 49.3 bits (116), Expect = 3.1e-06
Identity = 51/191 (26.70%), Postives = 82/191 (42.93%), Query Frame = 1


Query: 1   MMPLSI--GYVFAPTDEELLTYYLFHKIVGETVPPTALPVINLYTQQPSLIWQQCGG--I 60
           M P+S+  G+ F PTDEEL+ YYL  KI G T+    +P I+LY  +P   W   G   +
Sbjct: 1   MAPVSMPPGFRFHPTDEELVIYYLKRKINGRTIELEIIPEIDLYKCEP---WDLPGKSLL 60

Query: 61  DNKEI-YLFTTSMGRNLVSLQKLARMVPLGAVKTKTPKDK-------------------- 120
            +K++ + F +   R   +  +  R    G  K  T KD+                    
Sbjct: 61  PSKDLEWFFFSPRDRKYPNGSRTNRATKAGYWKA-TGKDRKVTSHSRMVGTKKTLVYYRG 120

Query: 121 --ANVNDCSWIMREYTIDPTFI-PKVFVYDFYVLCAI-RRRMLRN---------EKNAVS 154
              + +   W+M EY ++      K  + D Y LC + ++  L N         +KN  +
Sbjct: 121 RAPHGSRTDWVMHEYRLEEQECDSKSGIQDAYALCRVFKKSALANKIEEQHHGTKKNKGT 180

[Close]

BLAST of Cp4.1LG04g07300 vs. TAIR10
Match: AT5G17260.1 (AT5G17260.1 NAC domain containing protein 86)

HSP 1 Score: 48.9 bits (115), Expect = 4.0e-06
Identity = 44/166 (26.51%), Postives = 71/166 (42.77%), Query Frame = 1


Query: 1   MMPLSI--GYVFAPTDEELLTYYLFHKIVGETVPPTALPVINLYTQQPSLIWQQCGG--I 60
           M P+S+  G+ F PTDEEL+TYYL  KI G+ +    +P ++LY  +P   W   G   I
Sbjct: 1   MAPVSLPPGFRFHPTDEELITYYLKRKINGQEIELEIIPEVDLYKCEP---WDLPGKSLI 60

Query: 61  DNK-EIYLFTTSMGRNLVSLQKLARMVPLGAVKTKTPKDKANVND--------------- 120
            +K + + F +   R   +  +  R    G  K      + +  D               
Sbjct: 61  PSKDQEWFFFSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWRDRAIGTKKTLVYYRGR 120

Query: 121 ------CSWIMREYTIDPTFI-PKVF-VYDFYVLCAIRRRMLRNEK 139
                   W+M EY +D +   P  F + D Y LC + ++++   K
Sbjct: 121 APHGIRTGWVMHEYRLDESECEPSAFGMQDAYALCRVFKKIVIEAK 163

[Close]

BLAST of Cp4.1LG04g07300 vs. NCBI nr
Match: gi|659085728|ref|XP_008443570.1| (PREDICTED: NAC domain-containing protein 55-like [Cucumis melo])

HSP 1 Score: 145.6 bits (366), Expect = 9.0e-32
Identity = 77/179 (43.02%), Postives = 110/179 (61.45%), Query Frame = 1


Query: 4   LSIGYVFAPTDEELLTYYLFHKIVGETVPPTALPVINLYTQQPSLIWQQCGGIDNKEIYL 63
           L +G+ F PTDEELL YYLF+K++GE  P   LPVI+LY  +PS IWQ+CGG+D +++Y 
Sbjct: 6   LPLGFTFCPTDEELLGYYLFNKVLGEQAPLLELPVIDLYIHEPSEIWQKCGGVDKQDVYF 65

Query: 64  FTTSMGR------------NLVSLQKLARMV--------PLGAVKT-----KTPKDKANV 123
           FTT   +            N  S +  AR V         LG+VK         KD  ++
Sbjct: 66  FTTLKKKKSRIIRKVGSNGNTWSCENRARQVFSSTIDHLLLGSVKRFHYQKPKAKDCTDI 125

Query: 124 NDCSWIMREYTIDPTFIPKVFVYDFYVLCAIRRRMLRNEKNAVSTRIQKSFASNCPTTT 158
           NDC+WIM EYT+DP+ +PK  V+D YVLC IR+++++++K  V T  ++  +SN PTT+
Sbjct: 126 NDCTWIMYEYTLDPSIVPKGLVHDSYVLCMIRKKIVKSQK-IVMTSKKRQISSNWPTTS 183

[Close]

BLAST of Cp4.1LG04g07300 vs. NCBI nr
Match: gi|778664815|ref|XP_011660358.1| (PREDICTED: uncharacterized protein LOC105436381 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 8.4e-30
Identity = 68/174 (39.08%), Postives = 105/174 (60.34%), Query Frame = 1


Query: 4   LSIGYVFAPTDEELLTYYLFHKIVGETVPPTALPVINLYTQQPSLIWQQCGGIDNKEIYL 63
           + +GYVF PT+EELL YYL+ K++GE   P  LPVI+LYTQ+PS IWQQC G+DNK+IY 
Sbjct: 6   IPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDNKDIYF 65

Query: 64  FTTSMGRNLVSLQKLAR--------------------MVPLGAVKTKTPKDKANVNDCSW 123
           FTT   +    ++K+                       + LG +K    +      DC+W
Sbjct: 66  FTTLQKKKSRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQVKEDCTW 125

Query: 124 IMREYTIDPTFIPKVFVYDFYVLCAIRRRMLRNEKNAVSTRIQKSFASNCPTTT 158
           IM EYT++P  +P+  V+D YVLC IR++++++EK  +++  +++  +N P T+
Sbjct: 126 IMYEYTLNPFIVPEGLVHDSYVLCMIRKKIVKSEKMVMASNKRRASNNNWPMTS 179

[Close]

BLAST of Cp4.1LG04g07300 vs. NCBI nr
Match: gi|700201123|gb|KGN56256.1| (hypothetical protein Csa_3G110040 [Cucumis sativus])

HSP 1 Score: 117.1 bits (292), Expect = 3.4e-23
Identity = 65/186 (34.95%), Postives = 99/186 (53.23%), Query Frame = 1


Query: 4   LSIGYVFAPTDEELLTYYLFHKI--VGETVPPTALPVINLYTQQPSLIWQQCGGIDNKEI 63
           L +GY+F PTDEELL YYL+HKI  VG  +PP  LPV+++YT++ S IWQQC G+  +++
Sbjct: 6   LPMGYIFCPTDEELLCYYLYHKITIVGGFIPPIMLPVVDIYTKESSQIWQQCRGVHGQDV 65

Query: 64  YLFTTSMGRNLVSLQKLARMVPLGAV---------------------------KTKTPKD 123
           + F     +   +++K+    P GA+                             K  KD
Sbjct: 66  HFFICLKKKKSCAVRKVG---PNGAIWSGESKATKVFSHNNTLVGAFKLFHYENPKMKKD 125

Query: 124 KANVNDCSWIMREYTIDPTFIPKVFVYDFYVLCAIRRRMLRNEKNAVSTRIQKSFASNCP 161
             + N+ SWIM EYT+ P  +P+  V+  +VL  +R+++L+ +K A S   Q     + P
Sbjct: 126 GHHNNNYSWIMYEYTLHPNLVPEGVVHHSFVLFMLRKKILKQDKRAFSATKQTFSCIDWP 185

[Close]

BLAST of Cp4.1LG04g07300 vs. NCBI nr
Match: gi|700210011|gb|KGN65107.1| (hypothetical protein Csa_1G224380 [Cucumis sativus])

HSP 1 Score: 117.1 bits (292), Expect = 3.4e-23
Identity = 75/216 (34.72%), Postives = 107/216 (49.54%), Query Frame = 1


Query: 6   IGYVFAPTDEELLTYYLFHKIVGETVPPTALPVINLYTQQPSLIWQQCGGIDNKEIYLFT 65
           +GY F PTDEELL YYL+HK+VG  VPP  L V+++YT++P  IWQQCGG+D ++++ FT
Sbjct: 1   MGYTFCPTDEELLCYYLYHKVVGGFVPPIMLSVVDIYTKEPPQIWQQCGGVDGQDVHFFT 60

Query: 66  TSMGRNLVSLQKLARMVPLGAV---------------------------KTKTPKDKANV 125
               +    ++K+    P GA                              K  K   + 
Sbjct: 61  CLKKKKSRVVRKVG---PNGATWSGESKATKVFSHNNTLVGDFKRFHYENPKMKKGGHHN 120

Query: 126 NDCSWIMREYTIDPTFIPKVFVYDFYVLCAIRRRMLRNEKNAVSTRIQKSFASNCPTTT- 185
           N+ SWIM EYT+ P  +P+  V+  +VL  +R+++L+ +K A S   Q S   + P TT 
Sbjct: 121 NNYSWIMYEYTLHPNLVPEGVVHHSFVLFMLRKKILKQDKRAFSAIKQTSSCLDWPNTTK 180

Query: 186 -TTTLHTYMIKIRNYKKSLNVTYISYDRSHLFLFYN 193
            TTT     I   N K+      I  DR     F N
Sbjct: 181 ATTTQLEVHIDDLNTKRRRVEEQICIDRVEDDCFIN 213

[Close]

BLAST of Cp4.1LG04g07300 vs. NCBI nr
Match: gi|567875797|ref|XP_006430488.1| (hypothetical protein CICLE_v10013622mg, partial [Citrus clementina])

HSP 1 Score: 70.9 bits (172), Expect = 2.8e-09
Identity = 51/179 (28.49%), Postives = 84/179 (46.93%), Query Frame = 1


Query: 3   PLSIGYVFAPTDEELLTYYLFHKIVGETVP--PTALPVINLY-TQQPSLIWQQCGGID-- 62
           PL +G  F P+D +L+ +YLF+KI G   P     +   NLY  ++P  IW+Q GG D  
Sbjct: 4   PLPLGCKFQPSDGQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGGHDLE 63

Query: 63  -NKEIYLFTTSMGRNLVSLQKLARMVPLGA----------------------VKTKTPKD 122
             +++Y FT  + +  V+  ++ R V  G                        + +  KD
Sbjct: 64  DGEDLYFFT-HLKKKSVNSSRIDRRVGTGTWQGEDVGKAVVSRNSRKKIGSKKRFRYEKD 123

Query: 123 KANVNDCSWIMREYTIDPTFIPKVFVYDFYVLCAIRRRMLRNEKNAVSTRIQKSFASNC 154
           K+  N C WIM EY+++P+ +P+       VLC IR+ + +  K  +     +S +  C
Sbjct: 124 KSPHNGC-WIMHEYSLNPSLLPQNLQSSDLVLCRIRKNVGKENKRRMENEESQSRSYKC 180

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g07300 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG04g07300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L807_CUCSA	2.4e-23	34.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110040 PE=4 SV=1	[more]
A0A0A0LWA5_CUCSA	2.4e-23	34.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G224380 PE=4 SV=1	[more]
V4S8B0_9ROSI	2.0e-09	28.49	Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10013622mg PE=...	[more]
A0A067DD92_CITSI	3.7e-08	31.21	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g047622mg PE=4 S...	[more]
V4SSL0_9ROSI	3.7e-08	31.21	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013691mg PE=4 SV=1	[more]

BLAST of Cp4.1LG04g07300 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65910.1	3.1e-06	26.70	NAC domain containing protein 28	[more]
AT5G17260.1	4.0e-06	26.51	NAC domain containing protein 86	[more]

BLAST of Cp4.1LG04g07300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085728\|ref\|XP_008443570.1\|	9.0e-32	43.02	PREDICTED: NAC domain-containing protein 55-like [Cucumis melo]	[more]
gi\|778664815\|ref\|XP_011660358.1\|	8.4e-30	39.08	PREDICTED: uncharacterized protein LOC105436381 [Cucumis sativus]	[more]
gi\|700201123\|gb\|KGN56256.1\|	3.4e-23	34.95	hypothetical protein Csa_3G110040 [Cucumis sativus]	[more]
gi\|700210011\|gb\|KGN65107.1\|	3.4e-23	34.72	hypothetical protein Csa_1G224380 [Cucumis sativus]	[more]
gi\|567875797\|ref\|XP_006430488.1\|	2.8e-09	28.49	hypothetical protein CICLE_v10013622mg, partial [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR003441	NAC-dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g07300.1	Cp4.1LG04g07300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 6..109 score: 6.
IPR003441	NAC domain	PROFILE	PS51005	NAC	coord: 4..132 score: 9
IPR003441	NAC domain	unknown	SSF101941	NAC domain	coord: 2..131 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG04g07300	Cucurbita moschata (Rifu)	cmocpeB126
Cp4.1LG04g07300	Cucurbita moschata (Rifu)	cmocpeB321
Cp4.1LG04g07300	Cucurbita moschata (Rifu)	cmocpeB494
Cp4.1LG04g07300	Cucurbita moschata (Rifu)	cmocpeB703
Cp4.1LG04g07300	Wild cucumber (PI 183967)	cpecpiB696
Cp4.1LG04g07300	Wild cucumber (PI 183967)	cpecpiB697
Cp4.1LG04g07300	Cucumber (Chinese Long) v2	cpecuB694
Cp4.1LG04g07300	Cucumber (Chinese Long) v2	cpecuB695
Cp4.1LG04g07300	Bottle gourd (USVL1VR-Ls)	cpelsiB543
Cp4.1LG04g07300	Bottle gourd (USVL1VR-Ls)	cpelsiB548
Cp4.1LG04g07300	Watermelon (Charleston Gray)	cpewcgB576
Cp4.1LG04g07300	Watermelon (97103) v1	cpewmB627
Cp4.1LG04g07300	Melon (DHL92) v3.5.1	cpemeB604
Cp4.1LG04g07300	Melon (DHL92) v3.5.1	cpemeB614
Cp4.1LG04g07300	Cucumber (Gy14) v2	cgybcpeB967
Cp4.1LG04g07300	Cucumber (Gy14) v2	cgybcpeB969
Cp4.1LG04g07300	Melon (DHL92) v3.6.1	cpemedB715
Cp4.1LG04g07300	Melon (DHL92) v3.6.1	cpemedB726
Cp4.1LG04g07300	Melon (DHL92) v3.6.1	cpemedB769
Cp4.1LG04g07300	Silver-seed gourd	carcpeB0409
Cp4.1LG04g07300	Silver-seed gourd	carcpeB0529
Cp4.1LG04g07300	Silver-seed gourd	carcpeB1033
Cp4.1LG04g07300	Cucumber (Chinese Long) v3	cpecucB0867
Cp4.1LG04g07300	Cucumber (Chinese Long) v3	cpecucB0868
Cp4.1LG04g07300	Wax gourd	cpewgoB0856
Cp4.1LG04g07300	Cucurbita pepo (Zucchini)	cpecpeB269
Cp4.1LG04g07300	Cucurbita pepo (Zucchini)	cpecpeB400
Cp4.1LG04g07300	Cucumber (Gy14) v1	cgycpeB0601
Cp4.1LG04g07300	Cucumber (Gy14) v1	cgycpeB0602
Cp4.1LG04g07300	Cucurbita maxima (Rimu)	cmacpeB154
Cp4.1LG04g07300	Cucurbita maxima (Rimu)	cmacpeB539
Cp4.1LG04g07300	Cucurbita maxima (Rimu)	cmacpeB749