Cp4.1LG04g07220 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g07220
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionIsochorismatase hydrolase family protein
LocationCp4.1LG04 : 4286586 .. 4291608 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTTTGGGCAGATGAATGCAAAATTGAAGATGTTCTTGTCTGATTGTAGCCTCGTCGCTGTCGGTGAAGAAATTTCCTCTATTACGGTACGTTGAAATCCACTGATTAAGACAACAAAAGATTTCAAAGATCATCACGTTTTTCTTTTGACTAACTTGAACTGATCCAATCTCCTTAATATCAACTCCTTTTGGGAGTAATTGAACTCTGATCTCTCTTATCTTCGGCTGCCGCTTCATCTTTTCTCTGATTTCCCAAAAATGGTTTCCACCGTCATTGATCTTCTCAAGAACGAGATTCCGCTGGAGCAGGAATCTGTGGTTTTGGCTGAAGATACTGTTAATGGCCTTGTTCTTGTTGATATCATCAATGGCTTCTGCACTGTTGGCGCTGGAAATTTGGTAAGAGTTTTGCACTTGGGTTTGTTATATTGCACACTATCTGTTTGATGAAATGCCTCTGCGGTTTTTCCTGAAAATTTGGCTGTTTTCTTTCTTGTTGTTATTGCACACAATCTGTTCGATGTTATGCTTCTGTAGATTTACCGAAGAATTTGGCAAGTTTTCGTTAATTTGTTGCTTCTTTGGAATAAAATCTGTTTGATGTTATCATTCTCCTGCGTCTTAACTGGCTAGTTTATGGGTTTTTTCTACCCGTACATTTACTGGTAGAAGATTCGACCATTTGATCTATTAGTTGATGAACAAACTTAATCATTGAACTTTATTAAACTTCCCACCTTTACATATTTTGATGCTATACTTTTGCCTGGTCGACACTTGGGGGTCAACCAAGACCCCCTAATAAAACTTCGATAAACAACTTCAACTAGATTCACCTCTTGGAATTAGCCGATCTTACAAAATCGATCGGGCTGGCTAGTTGGGAAGGGATTCTTAGTGGAGAAAAGAATCGCTAAGAGATAGATTTGACTATTTGGTTAGGATGAATGAGTGACTATATAGCATGCTCTGGAAGAGATTGACCCTGAGAGTCAGTCCAGTCAAAAAGGGGAGGGCCCGTTGTCTAGACTGCATTTTGGGAGTTTGAACACCATCCCAGGTCTAATAACGGGTCTCACTCTCCATATTCTTATTCACTTTAGTTGGACTAAAATTTACATAGTCTTACTTCTCAAGTTCTAACCAAAAGATTCTATTCAATTTGGACTAAAGCAAATATAGTTCTACTTTTAGATTCTACTGAGAATCCTCGTTCTAATAAAAGTAATATTAGCAACTTGAGTGAGGTTCTACTTGTTAGGGCATAGACCTACCTTCGAGGGAAATGTTAATGGTTTGAATCTCACCTTCACCTTCACCTTCACCTCTCTTGTTAAACTAAGTAGAAATAAAATTGATGTTTTTCTCTTCTAATTAACGTTCCGTGTTTCTTTTTCTGTAAAAGGCTAGAAAATTGGTGGGATAAGAGTATTAGGTTATGGAGTTTGCTGCTTCTTTATAGCTTCACTCAATGGTTATACATATGGTTATACATACTAAAACTACATCTATGGTAAATGACATATAAAGTAAATGGTAGATAGTTATATACGTTATATTGTGGCTATATCTTGTAAAATTATATATAGTAAACCGAACCATATATGTAACTCATTAGGCAGTGCTGTAAAGATGTACTTTCTATATTCTTTGTATGACATATAAAGTAAATGGTAGATAGTTATTTACCGTAGATGATGACAATATCTGGTAAAATTATATATATAGTAAACTCAACCATATACATACCCGATTAGACCAATGCTTTGAAAATGTATTTTCTCTTCTTGTACATACTTGAAGTCATCAATATAAATCTCTAGCTAATATTTCTCATTGCATTTTCTCTCTACTGTTCTTGTGTTCATTTAGATCGAGTGTGTATTGGTGTGCGATCCTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATCTTTTATAAGGGCGTGGAAACCTCTCCTTAGCAGACACGTTTTAAAGCCTTAAGGGAAAGCCCGAAAAGGAAAACCCAAAGAAGACAATATCTGCTAACGGTGGACTTGGGCAGTTTCAGATCCTAACAAAGAAAATAATGTAAATTAGAACGTTGGAGTTTATGGGATGTTTTTGTTGGCAGGCACCAAGAGAACCAAACAGGCAGATCTCTGAAATGGTAGAGGAATCAGCAAGGATTGCAAGGATTTTCTGTGAGAAGAAATGGCCTGTAATGGCATTTCTTGATTCTCACCAACCAAACAAGCCTGAGGAACCATATCCTCCTCACTGTATTGCTGGTTCTGATGAATCCAACTTGGTTCCAGGCATGTCTCTCTCTCTCTCTCTCTTTCATTGTTTTTCTCTCATATCAAATCAAACAGATTGCATCAAAAACAAGTAAATGATCAGAAAATTTTAGATGAATATCATAATGATTTGAAGAAACCCATGGTTTTAGCAAATCTAGTGTATGTTTATAGGTCGAAAATATGGGAACTGGACAATAGAACCTATGACGACTTTTTAAGTAATAATTGTTAGATGAAAGTGTCCCACATCGGTTAATTTAGGGAATGGTCATGAGTTTATAATCAAATAATACACTTTCCATTGGTATGAGGCCTTTTGGGAAGCCCAAAGTAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGATACCATTGTGGAGAGTCGTGTTCGTCTAATATGGCATCAGAGTCATGCCCTAAATTTAGTCGTGCCAATAGATTGGTAAATCCTCAAATATAGAACAAAGGACTTCAAAAAAAAAAGACTAAGACTCTAAAGGAGTCGAGCCTCGATTAAGTGGAGAGTCGTATTCCTCTAACACAATGTCACCATTTAACTGAATCATTAGTTAGACTAAGCTGAGAGTTTGAAAATTAAGAAAGTATGTACCATTTTCAATCCAATCGATCTTTTAGGTGGAAGAATCTTAGAAACAAATTTTGCATTTTTTCGTTATATATTGTTAACTTAGGAAAATTACAATAATTGTAATTGGCTAAAACAAGAAGCACCAGTGGTCTAGTGGTAGAGTAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCATCTGATGTTTTTTTTTTTTGTTTTTTTTTTGAAAAGTTTCCCTCCTTTTATCATTAATGTTTTGGGGGTAAGGACTTGATAGAAAAACCGTGGACTGAGTGGATGAAAATTGCAGCACTGCGATGGGTGGAGAAGGAACCGAACGTGACGATCAGGCGAAAGGACTGCTTCGACGGCTACATTGGCTCCTTCCAGCCTGACGGCTCCAACGTCTTTGTGGATTGGATCAAACACAATCAAATCAAATCGGTATGAATCTTCTTCCACTTTTCATTTCTTTTCAATGTCTTTGTGGATTGGATCAAACACAACCAAATCGAATCTGTATGAATCTTCTTCCACTTTTCATTTCTTTTCAATAAACACGATATGATCCAGCAAGAGCTGTTGATTTGGAACTCAAACCTTTTCTTTTCTGTGGATTAAGCTTTTCGTGGTCGGAATTTGTACGGACATTTGCGTATTGGATTTCGTGTGCTCCACTATGTCCGCGAAGAATCTAGGGCTTCTCAGTCCGTTAAACGACGTCGTTTTGTACTCTCAGGCCTGTGCTACCTTTGATGTTCCTCTCCATGTTGCTACAAACACCAAAGGAGCTCTTCCTCATCCTCAGGTAATACATTTTTCGTTCTTTTTCTCTCTTTTTCTTCCTAATTGACTAATTAAAGAAAATAATCGAAATTATATAATAATAAGAAAAAAGAGTTTCGAGAAAAAAAAAATGAGAGAATATATATTTTACGTGGAGTAAGATATTTGAAAAGATTATGTTTTATATCAGATGATNATCAAATCAAATCCGTATGAATCTTCTTCCACTTTTCATTTCTTTTCAATGTCTTTGTGGATTGGATCAAACACAACCAAATCGAATCTGTATGAATCTTCTTCCACTTTTCATTTCTTTTCAATAAACACGATATGATCCAGCAAGAGCTGTTGATTTGGAACTCAAACCTTTTCTTTTCTGTGGATTAAGCTTTTCGTGGTCGGAATTTGTACGGACATTTGCGTATTGGATTTCGTGTGCTCCACTATGTCCGCGAAGAATCTAGGGCTTCTCAGTCCGTTAAACGACGTCGTTTTGTACTCTCAGGCCTGTGCTACCTTTGATGTTCCTCTCCATGTTGCTACAAACACCAAAGGAGCTCTTCCTCATCCTCAGGTAATACATTTTTCGTTCTTTTTCTCTCTTTTTCTTCCTAATTGACTAATTAAAGAAAATAATCGAAATTATATAATAATAAGAAAAAAGAGTTTCGAGAAAAAAAAAATGAGAGAATATATATTTTACGTGGAGTAAGATATTTGAAAAGATTATGTTTTATATCAGATGATTTATGTGTAGAACGCTCGCATTTGAGTCATGAAATACTTCTAATTATTTAAGTGCTCTGTTTGATTATAGTTTAATATACTTTTAACACTTTAAGTTATGAACGGGATGGCAGGAGTTCATGCACCATGTCGGCTTGTACATGGCGAAGGAAAGAGGTGCTGTTATAGCCAACAAAATATCACTAATATAAACCACCAAATAAGCCAACGTACCCACCTTACTTAAAGTAGTTAATCTTCAAATCGAATAAATAAATGGGAAGATGATCTTACCAAATAGAGAGTTTTTAAACTCGTGATGAATACTTTAAATTAATCGAACTAAAGGAAGAGATAGTAATGTTCTTGGTAACTGTCGTGTAAATTCTACAATAAATTGTGGTGTTACCTCATGTTCTTTTTTTTTCTCTCTCTCGGAATTTAACCATATTATTTATGAATAAAATGAGTCAAACCAGAATTTCTTTCGTGTCGTGTCGGAGAACAAGGCAAAGACAAGAACGGGAAGAGCTCCATCCGACCTTGAACCCGCCCCAAATAATTTTTTTTATCATTAAAATTTTAAAACATATAATATGT

mRNA sequence

TATTTTGGGCAGATGAATGCAAAATTGAAGATGTTCTTGTCTGATTGTAGCCTCGTCGCTGTCGGTGAAGAAATTTCCTCTATTACGGTACGTTGAAATCCACTGATTAAGACAACAAAAGATTTCAAAGATCATCACGTTTTTCTTTTGACTAACTTGAACTGATCCAATCTCCTTAATATCAACTCCTTTTGGGAGTAATTGAACTCTGATCTCTCTTATCTTCGGCTGCCGCTTCATCTTTTCTCTGATTTCCCAAAAATGGTTTCCACCGTCATTGATCTTCTCAAGAACGAGATTCCGCTGGAGCAGGAATCTGTGGTTTTGGCTGAAGATACTGTTAATGGCCTTGTTCTTGTTGATATCATCAATGGCTTCTGCACTGTTGGCGCTGGAAATTTGGACTTGATAGAAAAACCGTGGACTGAGTGGATGAAAATTGCAGCACTGCGATGGGTGGAGAAGGAACCGAACGTGACGATCAGGCGAAAGGACTGCTTCGACGGCTACATTGGCTCCTTCCAGCCTGACGGCTCCAACGTCTTTGTGGATTGGATCAAACACAATCAAATCAAATCGCTTTTCGTGGTCGGAATTTGTACGGACATTTGCGTATTGGATTTCGTGTGCTCCACTATGTCCGCGAAGAATCTAGGGCTTCTCAGTCCGTTAAACGACGTCGTTTTGTACTCTCAGGCCTGTGCTACCTTTGATGTTCCTCTCCATGTTGCTACAAACACCAAAGGAGCTCTTCCTCATCCTCAGCTTTTCGTGGTCGGAATTTGTACGGACATTTGCGTATTGGATTTCGTGTGCTCCACTATGTCCGCGAAGAATCTAGGGCTTCTCAGTCCGTTAAACGACGTCGTTTTGTACTCTCAGGCCTGTGCTACCTTTGATGTTCCTCTCCATGTTGCTACAAACACCAAAGGAGCTCTTCCTCATCCTCAGGAGTTCATGCACCATGTCGGCTTGTACATGGCGAAGGAAAGAGGTGCTGTTATAGCCAACAAAATATCACTAATATAAACCACCAAATAAGCCAACGTACCCACCTTACTTAAAGTAGTTAATCTTCAAATCGAATAAATAAATGGGAAGATGATCTTACCAAATAGAGAGTTTTTAAACTCGTGATGAATACTTTAAATTAATCGAACTAAAGGAAGAGATAGTAATGTTCTTGGTAACTGTCGTGTAAATTCTACAATAAATTGTGGTGTTACCTCATGTTCTTTTTTTTTCTCTCTCTCGGAATTTAACCATATTATTTATGAATAAAATGAGTCAAACCAGAATTTCTTTCGTGTCGTGTCGGAGAACAAGGCAAAGACAAGAACGGGAAGAGCTCCATCCGACCTTGAACCCGCCCCAAATAATTTTTTTTATCATTAAAATTTTAAAACATATAATATGT

Coding sequence (CDS)

ATGGTTTCCACCGTCATTGATCTTCTCAAGAACGAGATTCCGCTGGAGCAGGAATCTGTGGTTTTGGCTGAAGATACTGTTAATGGCCTTGTTCTTGTTGATATCATCAATGGCTTCTGCACTGTTGGCGCTGGAAATTTGGACTTGATAGAAAAACCGTGGACTGAGTGGATGAAAATTGCAGCACTGCGATGGGTGGAGAAGGAACCGAACGTGACGATCAGGCGAAAGGACTGCTTCGACGGCTACATTGGCTCCTTCCAGCCTGACGGCTCCAACGTCTTTGTGGATTGGATCAAACACAATCAAATCAAATCGCTTTTCGTGGTCGGAATTTGTACGGACATTTGCGTATTGGATTTCGTGTGCTCCACTATGTCCGCGAAGAATCTAGGGCTTCTCAGTCCGTTAAACGACGTCGTTTTGTACTCTCAGGCCTGTGCTACCTTTGATGTTCCTCTCCATGTTGCTACAAACACCAAAGGAGCTCTTCCTCATCCTCAGCTTTTCGTGGTCGGAATTTGTACGGACATTTGCGTATTGGATTTCGTGTGCTCCACTATGTCCGCGAAGAATCTAGGGCTTCTCAGTCCGTTAAACGACGTCGTTTTGTACTCTCAGGCCTGTGCTACCTTTGATGTTCCTCTCCATGTTGCTACAAACACCAAAGGAGCTCTTCCTCATCCTCAGGAGTTCATGCACCATGTCGGCTTGTACATGGCGAAGGAAAGAGGTGCTGTTATAGCCAACAAAATATCACTAATATAA

Protein sequence

MVSTVIDLLKNEIPLEQESVVLAEDTVNGLVLVDIINGFCTVGAGNLDLIEKPWTEWMKIAALRWVEKEPNVTIRRKDCFDGYIGSFQPDGSNVFVDWIKHNQIKSLFVVGICTDICVLDFVCSTMSAKNLGLLSPLNDVVLYSQACATFDVPLHVATNTKGALPHPQLFVVGICTDICVLDFVCSTMSAKNLGLLSPLNDVVLYSQACATFDVPLHVATNTKGALPHPQEFMHHVGLYMAKERGAVIANKISLI
Homology
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BLAST of Cp4.1LG04g07220 vs. Swiss-Prot
Match: NIC1_ARATH (Nicotinamidase 1 OS=Arabidopsis thaliana GN=NIC1 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 8.5e-38
Identity = 88/213 (41.31%), Postives = 123/213 (57.75%), Query Frame = 1 

Query: 4   TVIDLLKNEIPL-EQESVVLAEDTVNGLV---------------------------LVD- 63
           T+ D LK +IP+ E+E ++L  D+  GLV                           +V+ 
Sbjct: 6   TIFDQLKKQIPVDEEEPLILNRDSSVGLVIVDVVNGFCTIGSGNMAPTKHNEQISKMVEE 65

Query: 64  ---IINGFCT--------VGAGNLDLIEKPWT--------EWMKIAALRWVEKEPNVTIR 123
              +   FC         + + + D+ E+P+         E   + AL+W+E E   T+R
Sbjct: 66  SAKLAREFCDRKWPVLAFIDSHHPDIPERPYPPHCIIGTEESELVPALKWLESEDCATLR 125

Query: 124 RKDCFDGYIGSFQPDGSNVFVDWIKHNQIKSLFVVGICTDICVLDFVCSTMSAKNLGLLS 169
           RKDC +G++GS + DGSNVFVDW+K  QIK + VVGICTDICV DFV + +SA+N G+LS
Sbjct: 126 RKDCINGFVGSMESDGSNVFVDWVKEKQIKVIVVVGICTDICVFDFVATALSARNHGVLS 185

[Close]
BLAST of Cp4.1LG04g07220 vs. TrEMBL
Match: A0A061E248_THECC (Nicotinamidase 1 isoform 1 OS=Theobroma cacao GN=TCM_007366 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 9.5e-52
Identity = 115/215 (53.49%), Postives = 138/215 (64.19%), Query Frame = 1 

Query: 1   MVSTVIDLLKNEIPLEQESVVLAEDTVNGLV------------------------LVDII 60
           MVS  IDLLKNE+PLEQESVVL E+ V GLV                        +  +I
Sbjct: 1   MVSQTIDLLKNELPLEQESVVLPEEVVTGLVLVDIINGFCTVGAGNLAPREPNRQISGMI 60

Query: 61  NG-------FCT--------VGAGNLDLIEKPWT--------EWMKIAALRWVEKEPNVT 120
           N        FC         + + + D  E P+         E   + AL+W+EKE NVT
Sbjct: 61  NESARLARLFCEKKLPVMAFLDSHHADQPEDPYPPHCIAGTDESNLVPALQWIEKETNVT 120

Query: 121 IRRKDCFDGYIGSFQPDGSNVFVDWIKHNQIKSLFVVGICTDICVLDFVCSTMSAKNLGL 169
           IRRKDC+DGY+GS + DGSNVFVDW+K+NQI +L VVG+CTDICVLDFVCST+SA+N G 
Sbjct: 121 IRRKDCYDGYLGSIEADGSNVFVDWVKNNQISTLLVVGVCTDICVLDFVCSTLSARNRGF 180

[Close]
BLAST of Cp4.1LG04g07220 vs. TrEMBL
Match: A0A059ATH6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02618 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 4.7e-51
Identity = 112/218 (51.38%), Postives = 137/218 (62.84%), Query Frame = 1 

Query: 1   MVSTVIDLLKNEIPLEQESVVLAEDTVNGLV---------------------------LV 60
           MVS  +DLLK+E+PLEQ SVVL ED   GLV                           +V
Sbjct: 1   MVSQTVDLLKSELPLEQTSVVLGEDGATGLVLVDIINGFCTVGAGSLAPREPDEQISSMV 60

Query: 61  D----IINGFCT--------VGAGNLDLIEKPWT--------EWMKIAALRWVEKEPNVT 120
           +    +   FC         + +   D  E P+         E   + ALRW+EKEPNVT
Sbjct: 61  EESSRLARSFCDKKWPVLAFLDSHQPDKPEDPYPPHCIAGTDESNLVPALRWIEKEPNVT 120

Query: 121 IRRKDCFDGYIGSFQPDGSNVFVDWIKHNQIKSLFVVGICTDICVLDFVCSTMSAKNLGL 172
           IRRKDC+DGY+GSF+ DGSNVFVDW+K NQIK++ VVG CTDICVLDFVCST+SA+NLG 
Sbjct: 121 IRRKDCYDGYLGSFESDGSNVFVDWVKKNQIKTILVVGTCTDICVLDFVCSTLSARNLGF 180

[Close]
BLAST of Cp4.1LG04g07220 vs. TrEMBL
Match: A0A068U1T5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00036660001 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 8.0e-51
Identity = 108/215 (50.23%), Postives = 134/215 (62.33%), Query Frame = 1 

Query: 1   MVSTVIDLLKNEIPLEQESVVLAEDTVNGLVLVDIINGFCTVGAG--------------- 60
           M S  +D LK E+P+EQE++VL++D   GLVLVDI+NGFCTVGAG               
Sbjct: 1   MESQTMDQLKKELPVEQETLVLSDDVKTGLVLVDIVNGFCTVGAGNLAPVAPDKQISGMV 60

Query: 61  ------------------------NLDLIEKPWT--------EWMKIAALRWVEKEPNVT 120
                                   + D+ E P+         E   + AL+W+E EPNVT
Sbjct: 61  DESVRLAKMFCEKKWPIYALLDSHHPDIPEHPYPPHCIAGSDESKLVPALQWLEDEPNVT 120

Query: 121 IRRKDCFDGYIGSFQPDGSNVFVDWIKHNQIKSLFVVGICTDICVLDFVCSTMSAKNLGL 169
           +R KDC DG++GS   DGSNVFVDW+K NQIK + VVGICTDICVLDFVCS +SA+   +
Sbjct: 121 LRCKDCIDGFLGSIDKDGSNVFVDWVKTNQIKVILVVGICTDICVLDFVCSALSARTRRI 180

[Close]
BLAST of Cp4.1LG04g07220 vs. TrEMBL
Match: A0A0D2PM85_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G017600 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.5e-49
Identity = 107/215 (49.77%), Postives = 134/215 (62.33%), Query Frame = 1 

Query: 1   MVSTVIDLLKNEIPLEQESVVLAEDTVNGLV----------------------------- 60
           MVS  ID+LKNE+PLEQE VVL ED V GLV                             
Sbjct: 1   MVSQTIDVLKNELPLEQELVVLPEDVVTGLVLVDIINGFCTVGAGNLAPREPNRQISGMI 60

Query: 61  --LVDIINGFCT--------VGAGNLDLIEKPWT--------EWMKIAALRWVEKEPNVT 120
              V +   FC         + + + D  E P+         E   + AL+W++ E NVT
Sbjct: 61  SESVRLARLFCDKKLPVMAFLDSHHPDKPEDPYPPHCIQGTDESNLVPALQWIQNETNVT 120

Query: 121 IRRKDCFDGYIGSFQPDGSNVFVDWIKHNQIKSLFVVGICTDICVLDFVCSTMSAKNLGL 169
           IRRKDC+DGY+GS + DGSNVF DW+K+N I+++ VVG+CTDICVLDFVCST+S +N G 
Sbjct: 121 IRRKDCYDGYLGSMEADGSNVFADWVKNNHIEAILVVGVCTDICVLDFVCSTLSVRNRGF 180

[Close]
BLAST of Cp4.1LG04g07220 vs. TrEMBL
Match: K4B2G9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.3e-48
Identity = 109/215 (50.70%), Postives = 132/215 (61.40%), Query Frame = 1 

Query: 1   MVSTVIDLLKNEIPLEQESVVLAEDTVNGLV---------------------------LV 60
           MV   +DLLKNEIP+E+ESVV+ ED   GLV                           ++
Sbjct: 1   MVIKTVDLLKNEIPIEEESVVITEDIKAGLVLVDIINGFCTVGAGNLAPREPNRQISEMI 60

Query: 61  D----IINGFCT--------VGAGNLDLIEKPWT--------EWMKIAALRWVEKEPNVT 120
           D    +   FC         + +   D +E P+         E   + ALRWVE+EPNVT
Sbjct: 61  DESSRLARAFCDKKLPVLAFLDSHQPDKLEHPYPSHCITGTDESNLVPALRWVEEEPNVT 120

Query: 121 IRRKDCFDGYIGSFQPDGSNVFVDWIKHNQIKSLFVVGICTDICVLDFVCSTMSAKNLGL 169
           IRRKDC+DGYIGSFQ DGSNVFVDW+K+NQ++ L VVG+CTDICVLDFVCST+SAKN G 
Sbjct: 121 IRRKDCYDGYIGSFQEDGSNVFVDWVKNNQVQLLLVVGVCTDICVLDFVCSTLSAKNRGF 180

[Close]
BLAST of Cp4.1LG04g07220 vs. TAIR10
Match: AT2G22570.1 (AT2G22570.1 nicotinamidase 1)

HSP 1 Score: 158.7 bits (400), Expect = 4.8e-39
Identity = 88/213 (41.31%), Postives = 123/213 (57.75%), Query Frame = 1 

Query: 4   TVIDLLKNEIPL-EQESVVLAEDTVNGLV---------------------------LVD- 63
           T+ D LK +IP+ E+E ++L  D+  GLV                           +V+ 
Sbjct: 6   TIFDQLKKQIPVDEEEPLILNRDSSVGLVIVDVVNGFCTIGSGNMAPTKHNEQISKMVEE 65

Query: 64  ---IINGFCT--------VGAGNLDLIEKPWT--------EWMKIAALRWVEKEPNVTIR 123
              +   FC         + + + D+ E+P+         E   + AL+W+E E   T+R
Sbjct: 66  SAKLAREFCDRKWPVLAFIDSHHPDIPERPYPPHCIIGTEESELVPALKWLESEDCATLR 125

Query: 124 RKDCFDGYIGSFQPDGSNVFVDWIKHNQIKSLFVVGICTDICVLDFVCSTMSAKNLGLLS 169
           RKDC +G++GS + DGSNVFVDW+K  QIK + VVGICTDICV DFV + +SA+N G+LS
Sbjct: 126 RKDCINGFVGSMESDGSNVFVDWVKEKQIKVIVVVGICTDICVFDFVATALSARNHGVLS 185

[Close]
BLAST of Cp4.1LG04g07220 vs. NCBI nr
Match: gi|1009151415|ref|XP_015893541.1| (PREDICTED: nicotinamidase 1-like [Ziziphus jujuba])

HSP 1 Score: 242.3 bits (617), Expect = 9.4e-61
Identity = 126/194 (64.95%), Postives = 142/194 (73.20%), Query Frame = 1 

Query: 1   MVSTVIDLLKNEIPLEQESVVLAEDTVNGLVLVDIINGFCTVGAGNLD-----LIEKPWT 60
           MV   ID+L+NEIPLEQESV L ED V GLVLVDIINGFCTVGAGNL      +I   W 
Sbjct: 1   MVFQTIDILRNEIPLEQESVNLPEDAVTGLVLVDIINGFCTVGAGNLVSNSQIIIFFFWF 60

Query: 61  EWMK------------------IAALRWVEKEPNVTIRRKDCFDGYIGSFQPDGSNVFVD 120
            + K                  + ALRW+E E NVTIRRKDCFDG++GS + DGSNVFVD
Sbjct: 61  FFFKPEDPYPPHCIAGTDESNLVPALRWLENESNVTIRRKDCFDGFLGSIEADGSNVFVD 120

Query: 121 WIKHNQIKSLFVVGICTDICVLDFVCSTMSAKNLGLLSPLNDVVLYSQACATFDVPLHVA 172
           W+  NQIK+L VVGICTDICVLDFVCST+SA+NLGLL PL DVV+YS+ACATFDV L VA
Sbjct: 121 WVTKNQIKTLLVVGICTDICVLDFVCSTLSARNLGLLKPLKDVVVYSRACATFDVSLQVA 180

[Close]
BLAST of Cp4.1LG04g07220 vs. NCBI nr
Match: gi|659110298|ref|XP_008455153.1| (PREDICTED: uncharacterized protein LOC103495392 [Cucumis melo])

HSP 1 Score: 219.2 bits (557), Expect = 8.5e-54
Identity = 123/218 (56.42%), Postives = 142/218 (65.14%), Query Frame = 1 

Query: 1   MVSTVIDLLKNEIPLEQESVVLAEDTVNGLV---------------------------LV 60
           MVS+ ID+LK EIPL+QESVVLAED VNGLV                           +V
Sbjct: 1   MVSSSIDVLKKEIPLKQESVVLAEDAVNGLVLVDIINGFCTVGAGNLAPREPNRQISEMV 60

Query: 61  D----IINGFCT--------VGAGNLDLIEKPWT--------EWMKIAALRWVEKEPNVT 120
           +    I   FC         + +   +  EKP+         E   + AL+W+EKE NVT
Sbjct: 61  EESARIARIFCEKKWPVMAFIDSHQPNKPEKPYPPHCIVGSHESNLVPALQWMEKEANVT 120

Query: 121 IRRKDCFDGYIGSFQPDGSNVFVDWIKHNQIKSLFVVGICTDICVLDFVCSTMSAKNLGL 172
           IRRK CFDGY+GSF PDGSN+FVDWIK+N IKSL VVGICTDICVLDFVCSTMSAKNLG 
Sbjct: 121 IRRKGCFDGYMGSFLPDGSNLFVDWIKNNHIKSLLVVGICTDICVLDFVCSTMSAKNLGF 180

[Close]
BLAST of Cp4.1LG04g07220 vs. NCBI nr
Match: gi|590688003|ref|XP_007042825.1| (Nicotinamidase 1 isoform 1 [Theobroma cacao])

HSP 1 Score: 211.8 bits (538), Expect = 1.4e-51
Identity = 115/215 (53.49%), Postives = 138/215 (64.19%), Query Frame = 1 

Query: 1   MVSTVIDLLKNEIPLEQESVVLAEDTVNGLV------------------------LVDII 60
           MVS  IDLLKNE+PLEQESVVL E+ V GLV                        +  +I
Sbjct: 1   MVSQTIDLLKNELPLEQESVVLPEEVVTGLVLVDIINGFCTVGAGNLAPREPNRQISGMI 60

Query: 61  NG-------FCT--------VGAGNLDLIEKPWT--------EWMKIAALRWVEKEPNVT 120
           N        FC         + + + D  E P+         E   + AL+W+EKE NVT
Sbjct: 61  NESARLARLFCEKKLPVMAFLDSHHADQPEDPYPPHCIAGTDESNLVPALQWIEKETNVT 120

Query: 121 IRRKDCFDGYIGSFQPDGSNVFVDWIKHNQIKSLFVVGICTDICVLDFVCSTMSAKNLGL 169
           IRRKDC+DGY+GS + DGSNVFVDW+K+NQI +L VVG+CTDICVLDFVCST+SA+N G 
Sbjct: 121 IRRKDCYDGYLGSIEADGSNVFVDWVKNNQISTLLVVGVCTDICVLDFVCSTLSARNRGF 180

[Close]
BLAST of Cp4.1LG04g07220 vs. NCBI nr
Match: gi|702468499|ref|XP_010030003.1| (PREDICTED: uncharacterized protein LOC104419880 [Eucalyptus grandis])

HSP 1 Score: 209.5 bits (532), Expect = 6.7e-51
Identity = 112/218 (51.38%), Postives = 137/218 (62.84%), Query Frame = 1 

Query: 1   MVSTVIDLLKNEIPLEQESVVLAEDTVNGLV---------------------------LV 60
           MVS  +DLLK+E+PLEQ SVVL ED   GLV                           +V
Sbjct: 1   MVSQTVDLLKSELPLEQTSVVLGEDGATGLVLVDIINGFCTVGAGSLAPREPDEQISSMV 60

Query: 61  D----IINGFCT--------VGAGNLDLIEKPWT--------EWMKIAALRWVEKEPNVT 120
           +    +   FC         + +   D  E P+         E   + ALRW+EKEPNVT
Sbjct: 61  EESSRLARSFCDKKWPVLAFLDSHQPDKPEDPYPPHCIAGTDESNLVPALRWIEKEPNVT 120

Query: 121 IRRKDCFDGYIGSFQPDGSNVFVDWIKHNQIKSLFVVGICTDICVLDFVCSTMSAKNLGL 172
           IRRKDC+DGY+GSF+ DGSNVFVDW+K NQIK++ VVG CTDICVLDFVCST+SA+NLG 
Sbjct: 121 IRRKDCYDGYLGSFESDGSNVFVDWVKKNQIKTILVVGTCTDICVLDFVCSTLSARNLGF 180

[Close]
BLAST of Cp4.1LG04g07220 vs. NCBI nr
Match: gi|661894569|emb|CDP01568.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 208.8 bits (530), Expect = 1.1e-50
Identity = 108/215 (50.23%), Postives = 134/215 (62.33%), Query Frame = 1 

Query: 1   MVSTVIDLLKNEIPLEQESVVLAEDTVNGLVLVDIINGFCTVGAG--------------- 60
           M S  +D LK E+P+EQE++VL++D   GLVLVDI+NGFCTVGAG               
Sbjct: 1   MESQTMDQLKKELPVEQETLVLSDDVKTGLVLVDIVNGFCTVGAGNLAPVAPDKQISGMV 60

Query: 61  ------------------------NLDLIEKPWT--------EWMKIAALRWVEKEPNVT 120
                                   + D+ E P+         E   + AL+W+E EPNVT
Sbjct: 61  DESVRLAKMFCEKKWPIYALLDSHHPDIPEHPYPPHCIAGSDESKLVPALQWLEDEPNVT 120

Query: 121 IRRKDCFDGYIGSFQPDGSNVFVDWIKHNQIKSLFVVGICTDICVLDFVCSTMSAKNLGL 169
           +R KDC DG++GS   DGSNVFVDW+K NQIK + VVGICTDICVLDFVCS +SA+   +
Sbjct: 121 LRCKDCIDGFLGSIDKDGSNVFVDWVKTNQIKVILVVGICTDICVLDFVCSALSARTRRI 180

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g07220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NIC1_ARATH8.5e-3841.31Nicotinamidase 1 OS=Arabidopsis thaliana GN=NIC1 PE=1 SV=1[more]
BLAST of Cp4.1LG04g07220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A061E248_THECC9.5e-5253.49Nicotinamidase 1 isoform 1 OS=Theobroma cacao GN=TCM_007366 PE=4 SV=1[more]
A0A059ATH6_EUCGR4.7e-5151.38Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02618 PE=4 SV=1[more]
A0A068U1T5_COFCA8.0e-5150.23Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00036660001 PE=4 SV=1[more]
A0A0D2PM85_GOSRA1.5e-4949.77Uncharacterized protein OS=Gossypium raimondii GN=B456_008G017600 PE=4 SV=1[more]
K4B2G9_SOLLC1.3e-4850.70Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
BLAST of Cp4.1LG04g07220 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G22570.14.8e-3941.31 nicotinamidase 1[more]
BLAST of Cp4.1LG04g07220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1009151415|ref|XP_015893541.1|9.4e-6164.95PREDICTED: nicotinamidase 1-like [Ziziphus jujuba][more]
gi|659110298|ref|XP_008455153.1|8.5e-5456.42PREDICTED: uncharacterized protein LOC103495392 [Cucumis melo][more]
gi|590688003|ref|XP_007042825.1|1.4e-5153.49Nicotinamidase 1 isoform 1 [Theobroma cacao][more]
gi|702468499|ref|XP_010030003.1|6.7e-5151.38PREDICTED: uncharacterized protein LOC104419880 [Eucalyptus grandis][more]
gi|661894569|emb|CDP01568.1|1.1e-5050.23unnamed protein product [Coffea canephora][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR000868Isochorismatase-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016787 hydrolase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g07220.1Cp4.1LG04g07220.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000868Isochorismatase-likeGENE3DG3DSA:3.40.50.850coord: 68..155
score: 2.7E-10coord: 168..250
score: 2.
IPR000868Isochorismatase-likePFAMPF00857Isochorismatasecoord: 168..219
score: 4.3E-5coord: 61..157
score: 6.6
IPR000868Isochorismatase-likeunknownSSF52499Isochorismatase-like hydrolasescoord: 167..254
score: 5.36E-7coord: 30..158
score: 1.7
NoneNo IPR availablePANTHERPTHR11080PYRAZINAMIDASE/NICOTINAMIDASEcoord: 227..255
score: 1.2E-69coord: 2..151
score: 1.2
NoneNo IPR availablePANTHERPTHR11080:SF24SUBFAMILY NOT NAMEDcoord: 2..151
score: 1.2E-69coord: 227..255
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g07220Cucsa.218240Cucumber (Gy14) v1cgycpeB0600
Cp4.1LG04g07220CmaCh11G016720Cucurbita maxima (Rimu)cmacpeB154
Cp4.1LG04g07220CmoCh11G014570Cucurbita moschata (Rifu)cmocpeB126
Cp4.1LG04g07220Cla012921Watermelon (97103) v1cpewmB632
Cp4.1LG04g07220Csa7G065110Cucumber (Chinese Long) v2cpecuB692
Cp4.1LG04g07220MELO3C018609Melon (DHL92) v3.5.1cpemeB613
Cp4.1LG04g07220ClCG09G016110Watermelon (Charleston Gray)cpewcgB578
Cp4.1LG04g07220CSPI07G05860Wild cucumber (PI 183967)cpecpiB694
Cp4.1LG04g07220Lsi03G006990Bottle gourd (USVL1VR-Ls)cpelsiB544
Cp4.1LG04g07220MELO3C018609.2Melon (DHL92) v3.6.1cpemedB725
Cp4.1LG04g07220CsaV3_7G006850Cucumber (Chinese Long) v3cpecucB0866
Cp4.1LG04g07220Bhi05G000767Wax gourdcpewgoB0848
Cp4.1LG04g07220CsGy7G005560Cucumber (Gy14) v2cgybcpeB969
Cp4.1LG04g07220Carg23067Silver-seed gourdcarcpeB1033
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g07220Cucumber (Gy14) v2cgybcpeB966
Cp4.1LG04g07220Melon (DHL92) v3.6.1cpemedB715
Cp4.1LG04g07220Silver-seed gourdcarcpeB0402
Cp4.1LG04g07220Silver-seed gourdcarcpeB0409
Cp4.1LG04g07220Silver-seed gourdcarcpeB0529
Cp4.1LG04g07220Cucumber (Chinese Long) v3cpecucB0868
Cp4.1LG04g07220Cucurbita pepo (Zucchini)cpecpeB269
Cp4.1LG04g07220Cucurbita pepo (Zucchini)cpecpeB400
Cp4.1LG04g07220Cucumber (Gy14) v1cgycpeB0602
Cp4.1LG04g07220Cucurbita maxima (Rimu)cmacpeB539
Cp4.1LG04g07220Cucurbita maxima (Rimu)cmacpeB749
Cp4.1LG04g07220Cucurbita moschata (Rifu)cmocpeB321
Cp4.1LG04g07220Cucurbita moschata (Rifu)cmocpeB494
Cp4.1LG04g07220Cucurbita moschata (Rifu)cmocpeB703
Cp4.1LG04g07220Wild cucumber (PI 183967)cpecpiB697
Cp4.1LG04g07220Cucumber (Chinese Long) v2cpecuB695
Cp4.1LG04g07220Bottle gourd (USVL1VR-Ls)cpelsiB548
Cp4.1LG04g07220Melon (DHL92) v3.5.1cpemeB604