Cp4.1LG04g04560 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g04560
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	LysM domain GPI-anchored protein
Location	Cp4.1LG04 : 6477046 .. 6482763 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAGTCGATATACTTTTGTTTATTATTATTAATATTATTATTATTTTCCTGAAAAGACATTATTTGAAATTTGAAAAGAATTTTCGTCGTAATGCAATTTCTCCGTAATTGCTCACAGCAACAATAAAAAGCTTCATTCAGTCTCTTCAATGGCGGCTTCTGCTTCTCTCTCCATTCCCCATTTAATTTTCTCTCTCTAAGGTCTATGCCCTTCACCCACGTTGAAGCTTGACCAGTACCTATTTCCCTCGGTGTCTGCTTCGACTTTTCCCACTCGAAAACCGCGTTTCTCCCAGCTTCAATCCGCCATTAATATCCTACCAGAACCTTGCAACTACGAGGACGAGAAGACGCTAATGGCTTCCGGAGCTGGAACTATGTTTTTCAGAGTCATCGTGTTCTCCGCCATCGTCGCTGTATGCGTTGCTCAGCCACCGCCGCGGTTCAACTGCAGCTCGACCTCAAAATGCGGCTCTCTAATCGACTACATTCCGCCAAACGCAACCACCGTTGGAGACGTGATGAAGCTCTTCGATGTCAAGCATCTCCTCTCCTTCCTTGGGGCTAACAACTTTCCGATGAACACCTCGTCAAGCTTTTCCTTACCGGCGTCTCAAAAGATCAAGATTCCGTTCAACTGCAAGTGTGAAAATGGTACTGGTCTCTCCGATAAGCGTCCGATTTACAAAGTCCAGAGCGGAAATACTCTCGACAAAATCGCGGAAATCACTTTCGCGAGACTCGTAACTTCCCTGCAAATCGCGGCCGCAAATGGAATTCCTGATCCGAATAAAATTGAGGTAGGGCAAGAGCTGTGGATTCCTCTGCCGTGTAGCTGCGACGATGTGGAGGGGAACAAAGTCGTCCATTACGGACATTTGGTGGAATCTGGAAGCTCCGTATCGGCGATTGCCACAAGATTTAATGTATCGGAGGCCACGATCTTGAAGCTGAATGGAATTGCAGATGCGAGAGATCTTAAAGCTTCTCAAGTTCTTGATATTCCTCTCAAAGGTTCATTTCATCTTCCTCATTTTATTTCTGAATTTCTCGTCCATTTTAGGTGGAAACTGAAACTGATTACATGATTTCTCATCACTCTGAAAAAAATTTAGGGCTTAATTGGCTGAGTTCTTCATCCATTTGGCTTTTGTTTTCTGATGGTTTCAATTGATAATCCATAATCGTTAGTTCTAAGTATGATTTAGGGTTTAAACTGAAAGATTTTTCCATTTGAATGAAGAGAGAGAGAGAGGGAGAGATAGAGAGAGAGAAACTGATTTTACTTTTTAGTCCTTTTGCTTCTTGTCTTTTCTCGTATTCTTAAATATTAATAATAAATAAATAAATAAATAAATAAATAAAACTCTATTTTAAGTAATTTTCCATAACTTTTTTTAATGTCTATTTAAAAAAGTTTTTTTTAAACCCTATTTTTTGTTTTGTAAAATTCTAAAGTGCTTCTATAAATAAAATGGAAATAATAAAAGTTGCTTTTTTGGTTCAATAAAAGTTGTTATTTGTTAATAAATATAAATTATATATATATTTTTTAAAAAATAGATTTAAATTTATTTTCTAATTTACTCTTTTTACCTTTTGAGATTTTTTAAACATGTTAAAATGTTGAGAATAATATATATATATATTTTTAAGGTGCTTAGAAATAAGATTGAAATAATAAAAGTTTTTTTTAGTTAAAAAAATGTCGTTATTTGTTAATAAATATAAATTATATTAAAGCTATTAAGATTTAAATTTATTTCTAATTTACTCATTTTACCTTTGAGATTTTTTACAAATGTCAAAATGTTGAGGAATTAAAAAAAAAAGAAAAAAAAAGAAAAAAAAAAGGAATATATATATATATATATATATTTATGTATATAAGGTAAGAGTTTGGCCTAATCTTTATCGATTGAGCAAACAAAGCTGTTATTTTGCGAAGTGTGTGCATTGGTCAACCTATAGACATTTTTGTTTTATTAATATGTGGTCTGTAGATTCCTTAATGATTTAAGGTTGTATGGTTTGATCCTGATATTAAGGATTTGGTTGTTCTTCTGTTCCGTTTGGGAAAATGACTGGACTTGACTTTTGAGTACTAAATTATATTGACGTCTGAGATAATACGCTGTTTGGTAGTTTTATATTAGCAAACACCTTGATGTCACACTCATAGGTTTTGAGATTTTTTTATATGAAAAAATGGAGAGAGAGTGGCTTCCTGACATTGCTGATGTTTTCACACCCTTGGGTTGACTCTTGGAGGTGAGAAAGTCCTCCATTAGAAATGGGTGAAGGGTAGTTTTGGTATTAGTGTTAGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGGCTTCCTGATATTGCTGATGCTTTCACACCCTTGGGTTGGCTCTTGGAGGCGGGATCCTCGATTAGAATTGGGTGAAGGGTAGTTTTGGTATTAGTGTGTTAATAGAGAGAGAGAGGCTTCCTGATATTGCTGATGTTTTGAGAGCCTTGGGTTGGCTTTTGGAGGGAGAAATCCTCCGTTACAATTGTGTTGTTAGGTTGAATGGCACCGTGTCTTGTATGGGTCACGACCTCATGTATTTATAGATGTGTACAATGAAGATTACATTCTACATCATAGATTTGGTAACAAACCATGAAATTATAGATTTGGTAACAAACCAGTAAATCATAGATTTAGTAACAAACTAGTAAATCACTAAATTATCTTACTATATACCGATCTATTCTACGTTTAACTGGGTGAAGGGTAGTTTTGGTATTAGTGTTAGTAGAGAGAGAGAGGAGTGGCTTCCTCATATTGCTGATGTCTTCACCCCCTTGGGTTGGCTCTTGTAGGGGAGAAAGTCCTCCATTAGAAATGGGTGAAGGGTAGTTTTGGTATTAGTGTTAGTAGAGAGAGAGAGAGAGTGGCTTCCTCATATTGCTGATGTCTTTGGGTTGGCTCTTGGAGGGAGAAAGTCCTCCATTAGAAGTGGGTGAAGGGTAGTTTTGGTATTTTGTGTTAGTAGAGAGAGAGAGAGAGAGAGAGATGAACAAAGTCAACTAAAAAAAACCCAAAGATGGTAAAAACAATTTGAAGTCAACTGATCACAGACAGAGTGGAGTGGTGGATGGATTTGAATCTTTTTTAGTGGTGGAGGGATTTGGAAATTGTGTTGTTTAATTTCTTTATCTTATTCATCCAAGCAACAAAGACCATCATTAAAAATAGAGCATTTGTAAGGGTGGTGCGCTCTTCTTGTTGGGGCCATAGTGATGAACTCATTGAAAGTATAAGGATGTGTTTGTTGACTTTGATCATATTTCTAGGAATGTCGTTAGAGAGATCGCCATTCTATGATAGAGGACGTTTTTACATTTTTGTTCCATGTTCGGGTTGGATCATTTAGCATGCTAGTTCGTTGCGTAGTTATGTCCAACTCATGAGAGGAATAATGACCTTTACGAAGAGATTTGGATTTGATTCGTCGTTACACTACAAAGATTTCCATGAGTAACTTATTCTTTAAACTTTCACCGTTCTCACTACGTCGTCTTTTCTAAGTGGTAATATTTTTTGTTTTCTAATAGCTAACATAACAATTCTGGACATGTTTGAGAGTGATTTTAGAACGAACGAACTTAGTGATTTTCAGTATAAATCACTCACAAACATCTCTTCAATGTTCACGTTCATAACACAAACACTATTATTAACTTTCACCCGTCAATCTAATCCTAAACTGTATTGTCTAAACGATGGAGATTGAAAGATGCTTACGAGCTGACTAGCCGTTCAACGAAGATATGCTTCGTTCGTCAATTCATCGTTATCATTCCTGAAGCTCCTTTATTTTTGTTCAACAAATGCCATTATCTTGAAAAATAACTGTTCTGTATTCTATCTGCAGCTTGTTCATCTGTGATCAGGCAAGACTCTTTAGACTTCCCATTCCTCCTCCCCAACGGCACGTACGATTACACAGCGAACAACTGCGTATTGTGCGAGTGTGATGCTGCAAAAAACATGATGTAAGTGTTGCCAATACTAATAACTTATTATATTGAGAACTTGTTTGCTCTAAGTTGAAGGTAGCTCGAGTTAGTGAGCTTACCTTTTGTTTGGAACCACGACCCTTCACAGTAGTATGATATTGTCCACTTTAAGCATAAGCTCTCGTGGCAGAGATGTATTCCTTATTTATAAACTCATGACGATTCTCCTCTAAATTAGCTAATGTGAGACTTCCTCCGAACAATCCTGAATGCGTTTTTCTGGTTTTCTTTTTTGTCAGTCTTGACTGTAAGCCATCACAGCTGAAGCCACCCTCACAGAAATCATCAAATTGGTCGACATGCCCAGCCATGCCATGTGAAGGTAGCAATTTGCTCCTTGGTAACTCAACAGCTTCTGGTTGCAGCACCACTACATGTGCCTACGCTGGTTTCTCTAAACAAACCATCTTCACAAATATTTCCACTCTGAACACTTGCCCTGGACCTGAAGGTGGACCTCAAGGTGAGCTGCAAACTTAAGTCGTTTAAAATTACAAGGACCAAACGATATTTTAACCTACTTTTACTACTTTTATTATGGATAGAAAATGCTCACTACTCGAAATCATTGTCTGAGAGCAACATGAAAGCACTATTAAAAATGTCAAAAGAACACTACATGTTGTTTGTTTTTTAAAAAGCTTAGAAGCATTGTTAAGTGTTTTTTGTGAGAAAACACTAGTAGAGTGCTTTTAGTCTGGGCTAAGAAGCACTTTTGATCCCACGTTGGTTGGAGAGTAGAACAAAACATTCATTATAAGGGTATAGAAACCTCTCCCTAGCAGATGCGTTTTAAAACCGTGAGGCTGACGGCGATACGTAATGGGTCAAAGCGAACAATATTTGCTTGCGGTAGGCTTGGACTGTTACAAATGGTATCAGAGCCAGTCACCGGATGGTGTGGCAGTGACACGTTCGTTGGGCCCCTAAGGAGAGTGGATTGTGAGATCCCACATTGGTTGGAGAGGAGAACGAAACATTCATTAAATAAGGGTGTGGAAACCTCTCCCTAGCAACACGTTTTAAAATCGTGAGGCTGACAACGATATATACCGGGCCAAAGCGAACAATATCTGCTAGCGGTGGGCTTGAGCTGTTACACATCACCCCCTAAACACATATTTTCGGCTGCTCATATGATAACCGATAACTCGCCCCACAATTCTTTGTTTAAACACCTCTCCTTCACTATAATCATCATCCAGAATCTGACTGTTTCCTATCATGTATGAGCAGATAATCCAAACAGCGCTTCAAGGACGGGTTCACAAGGTCTGAAGTTGGTCGGTCTCGTCGTCTTTATGCATCTGCTGAGCTTTGGTTCCCTTCTCATTCAGTAAGAAGTATAATTTCCTTCTTGTATGTTGGCATAGAGAGATAATCATAACAATGTAGGTAGATTCTTGGTGTTCTGTATTTATCATTGAATAGCCATCTTTTAGTTTCCTTTTTTTCTCGTTAAGCGTTAATAAATCGAGTTGAAATAAAGCTGTTCATGGCGAGAAATCGTGAGGATGAACTGGATTAGAATCCATAGTTGACTGTGAATTTGATTTTGATCTGTAATGTGTTGATGAATGTATTGTATTGTGCACTGAGATTGTTGCAGGAATAAGAATGATGATTTTCCCTTGTTTTCATAC

mRNA sequence

AGAAAGTCGATATACTTTTGTTTATTATTATTAATATTATTATTATTTTCCTGAAAAGACATTATTTGAAATTTGAAAAGAATTTTCGTCGTAATGCAATTTCTCCGTAATTGCTCACAGCAACAATAAAAAGCTTCATTCAGTCTCTTCAATGGCGGCTTCTGCTTCTCTCTCCATTCCCCATTTAATTTTCTCTCTCTAAGGTCTATGCCCTTCACCCACGTTGAAGCTTGACCAGTACCTATTTCCCTCGGTGTCTGCTTCGACTTTTCCCACTCGAAAACCGCGTTTCTCCCAGCTTCAATCCGCCATTAATATCCTACCAGAACCTTGCAACTACGAGGACGAGAAGACGCTAATGGCTTCCGGAGCTGGAACTATGTTTTTCAGAGTCATCGTGTTCTCCGCCATCGTCGCTGTATGCGTTGCTCAGCCACCGCCGCGGTTCAACTGCAGCTCGACCTCAAAATGCGGCTCTCTAATCGACTACATTCCGCCAAACGCAACCACCGTTGGAGACGTGATGAAGCTCTTCGATGTCAAGCATCTCCTCTCCTTCCTTGGGGCTAACAACTTTCCGATGAACACCTCGTCAAGCTTTTCCTTACCGGCGTCTCAAAAGATCAAGATTCCGTTCAACTGCAAGTGTGAAAATGGTACTGGTCTCTCCGATAAGCGTCCGATTTACAAAGTCCAGAGCGGAAATACTCTCGACAAAATCGCGGAAATCACTTTCGCGAGACTCGTAACTTCCCTGCAAATCGCGGCCGCAAATGGAATTCCTGATCCGAATAAAATTGAGGTAGGGCAAGAGCTGTGGATTCCTCTGCCGTGTAGCTGCGACGATGTGGAGGGGAACAAAGTCGTCCATTACGGACATTTGGTGGAATCTGGAAGCTCCGTATCGGCGATTGCCACAAGATTTAATGTATCGGAGGCCACGATCTTGAAGCTGAATGGAATTGCAGATGCGAGAGATCTTAAAGCTTCTCAAGTTCTTGATATTCCTCTCAAAGCTTGTTCATCTGTGATCAGGCAAGACTCTTTAGACTTCCCATTCCTCCTCCCCAACGGCACGTACGATTACACAGCGAACAACTGCGTATTGTGCGAGTGTGATGCTGCAAAAAACATGATCACCACTACATGTGCCTACGCTGGTTTCTCTAAACAAACCATCTTCACAAATATTTCCACTCTGAACACTTGCCCTGGACCTGAAGGTGGACCTCAAGATAATCCAAACAGCGCTTCAAGGACGGGTTCACAAGGTCTGAAGTTGGTCGGTCTCGTCGTCTTTATGCATCTGCTGAGCTTTGGTTCCCTTCTCATTCAGTAAGAAGTATAATTTCCTTCTTGTATGTTGGCATAGAGAGATAATCATAACAATGTAGGTAGATTCTTGGTGTTCTGTATTTATCATTGAATAGCCATCTTTTAGTTTCCTTTTTTTCTCGTTAAGCGTTAATAAATCGAGTTGAAATAAAGCTGTTCATGGCGAGAAATCGTGAGGATGAACTGGATTAGAATCCATAGTTGACTGTGAATTTGATTTTGATCTGTAATGTGTTGATGAATGTATTGTATTGTGCACTGAGATTGTTGCAGGAATAAGAATGATGATTTTCCCTTGTTTTCATAC

Coding sequence (CDS)

ATGGCTTCCGGAGCTGGAACTATGTTTTTCAGAGTCATCGTGTTCTCCGCCATCGTCGCTGTATGCGTTGCTCAGCCACCGCCGCGGTTCAACTGCAGCTCGACCTCAAAATGCGGCTCTCTAATCGACTACATTCCGCCAAACGCAACCACCGTTGGAGACGTGATGAAGCTCTTCGATGTCAAGCATCTCCTCTCCTTCCTTGGGGCTAACAACTTTCCGATGAACACCTCGTCAAGCTTTTCCTTACCGGCGTCTCAAAAGATCAAGATTCCGTTCAACTGCAAGTGTGAAAATGGTACTGGTCTCTCCGATAAGCGTCCGATTTACAAAGTCCAGAGCGGAAATACTCTCGACAAAATCGCGGAAATCACTTTCGCGAGACTCGTAACTTCCCTGCAAATCGCGGCCGCAAATGGAATTCCTGATCCGAATAAAATTGAGGTAGGGCAAGAGCTGTGGATTCCTCTGCCGTGTAGCTGCGACGATGTGGAGGGGAACAAAGTCGTCCATTACGGACATTTGGTGGAATCTGGAAGCTCCGTATCGGCGATTGCCACAAGATTTAATGTATCGGAGGCCACGATCTTGAAGCTGAATGGAATTGCAGATGCGAGAGATCTTAAAGCTTCTCAAGTTCTTGATATTCCTCTCAAAGCTTGTTCATCTGTGATCAGGCAAGACTCTTTAGACTTCCCATTCCTCCTCCCCAACGGCACGTACGATTACACAGCGAACAACTGCGTATTGTGCGAGTGTGATGCTGCAAAAAACATGATCACCACTACATGTGCCTACGCTGGTTTCTCTAAACAAACCATCTTCACAAATATTTCCACTCTGAACACTTGCCCTGGACCTGAAGGTGGACCTCAAGATAATCCAAACAGCGCTTCAAGGACGGGTTCACAAGGTCTGAAGTTGGTCGGTCTCGTCGTCTTTATGCATCTGCTGAGCTTTGGTTCCCTTCTCATTCAGTAA

Protein sequence

MASGAGTMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMNTSSSFSLPASQKIKIPFNCKCENGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVESGSSVSAIATRFNVSEATILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCECDAAKNMITTTCAYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGLKLVGLVVFMHLLSFGSLLIQ

Homology

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BLAST of Cp4.1LG04g04560 vs. Swiss-Prot
Match: LYM2_ARATH (LysM domain-containing GPI-anchored protein 2 OS=Arabidopsis thaliana GN=LYM2 PE=1 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.3e-64
Identity = 125/264 (47.35%), Postives = 166/264 (62.88%), Query Frame = 1


Query: 24  AQPPPRFNCS-STSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMNTSSSFS 83
           AQ    FNCS STS C SL+ Y   NATT+ ++  LF VK+L S LGANN P+NTS    
Sbjct: 23  AQMTGNFNCSGSTSTCQSLVGYSSKNATTLRNIQTLFAVKNLRSILGANNLPLNTSRDQR 82

Query: 84  LPASQKIKIPFNCKCENGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIP 143
           +  +Q +++P +C C NGTG+S++   Y ++  + L  +A   F  LVT  +I+  N IP
Sbjct: 83  VNPNQVVRVPIHCSCSNGTGVSNRDIEYTIKKDDILSFVATEIFGGLVTYEKISEVNKIP 142

Query: 144 DPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVESGSSVSAIATRFNVSEATILKLNGI 203
           DPNKIE+GQ+ WIPLPCSCD + G  VVHY H+V+ GSS+  IA +F     T+ +LNGI
Sbjct: 143 DPNKIEIGQKFWIPLPCSCDKLNGEDVVHYAHVVKLGSSLGEIAAQFGTDNTTLAQLNGI 202

Query: 204 ADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCECDAAKNMITT 263
                L A + LD+PLKACSS +R+DSLD P LL N +Y +TANNCV C CDA KN  T 
Sbjct: 203 IGDSQLLADKPLDVPLKACSSSVRKDSLDAPLLLSNNSYVFTANNCVKCTCDALKNW-TL 262

Query: 264 TCAYAGFSKQTIFTNISTLNTCPG 287
           +C  +   K + +      + C G
Sbjct: 263 SCQSSSEIKPSNWQTCPPFSQCDG 285

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BLAST of Cp4.1LG04g04560 vs. Swiss-Prot
Match: CEBIP_ORYSJ (Chitin elicitor-binding protein OS=Oryza sativa subsp. japonica GN=CEBIP PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.9e-54
Identity = 123/310 (39.68%), Postives = 162/310 (52.26%), Query Frame = 1


Query: 18  IVAVCVAQPPPRFNC--SSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPM 77
           +V +        F C  +S + C S I Y  PNATT G+++  F+   L   LGAN  P 
Sbjct: 19  LVLLAAPASAANFTCAVASGTTCKSAILYTSPNATTYGNLVARFNTTTLPDLLGANGLPD 78

Query: 78  NTSSSFSLPASQKIKIPFNCKCENGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQI 137
            T SS  + A+  +KIPF C+C    G SD+ PIY VQ  + LD IA   F   VT  +I
Sbjct: 79  GTLSSAPVAANSTVKIPFRCRCNGDVGQSDRLPIYVVQPQDGLDAIARNVFNAFVTYQEI 138

Query: 138 AAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVESGSSVSAIATRFNVSEAT 197
           AAAN IPDPNKI V Q LWIPLPCSCD  EG+ V+H  + V  G + SAIA ++ V+E+T
Sbjct: 139 AAANNIPDPNKINVSQTLWIPLPCSCDKEEGSNVMHLAYSVGKGENTSAIAAKYGVTEST 198

Query: 198 ILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFP-FLLPNGTYDYTANNCVLCECD 257
           +L  N I D   L+  Q+LD+PL  C S I   S D    LLP+GTY +TA NC+ C C 
Sbjct: 199 LLTRNKIDDPTKLQMGQILDVPLPVCRSSISDTSADHNLMLLPDGTYGFTAGNCIRCSCS 258

Query: 258 AAKNMI-------------------------------TTTCAYAGFSKQT---IFTNIST 291
           +    +                               +TTCAY+G+S  +   I T+++T
Sbjct: 259 STTYQLNCTAVQNKGCPSVPLCNGTLKLGETNGTGCGSTTCAYSGYSNSSSLIIQTSLAT 318

[Close]

BLAST of Cp4.1LG04g04560 vs. Swiss-Prot
Match: LYM1_ARATH (LysM domain-containing GPI-anchored protein 1 OS=Arabidopsis thaliana GN=LYM1 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.7e-27
Identity = 86/299 (28.76%), Postives = 139/299 (46.49%), Query Frame = 1


Query: 32  CSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMNTSS--SFSLPASQKI 91
           CSS   C +L+ Y       V +V  LF V  + S L AN   ++     +  LP+   +
Sbjct: 34  CSSNDTCNALLGYTLYTDLKVSEVASLFQVDPI-SILLANAIDISYPDVENHILPSKLFL 93

Query: 92  KIPFNCKCENGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIPDPNKIEV 151
           KIP  C C +G   S     YK +  + L  IA+  +  LV++ QI  AN + DP+ ++V
Sbjct: 94  KIPITCSCVDGIRKSVSTH-YKTRPSDNLGSIADSVYGGLVSAEQIQEANSVNDPSLLDV 153

Query: 152 GQELWIPLPCSCDDVEGNKV--VHYGHLVESGSSVSAIATRFNVSEATILKLNGIADARD 211
           G  L IPLPC+C +   N +  V+  ++V+   ++  IA R++ +   ++ +N +  A D
Sbjct: 154 GTSLVIPLPCACFNGTDNSLPAVYLSYVVKEIDTLVGIARRYSTTITDLMNVNAMG-APD 213

Query: 212 LKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCECD-AAKNMI------ 271
           + +  +L +PL AC+S   + + DF  ++PNG+Y   A +CV C C   ++N+       
Sbjct: 214 VSSGDILAVPLSACASKFPRYASDFGLIVPNGSYALAAGHCVQCSCALGSRNLYCEPASL 273

Query: 272 -----------------------------TTTCAYAGFSKQTIFTNI--STLNTCPGPE 289
                                         TTC Y G +  TI T +  S    CPGP+
Sbjct: 274 AVSCSSMQCRNSNLMLGNITVQQTSAGCNVTTCDYNGIANGTILTMLTRSLQPRCPGPQ 329

[Close]

BLAST of Cp4.1LG04g04560 vs. Swiss-Prot
Match: LYM3_ARATH (LysM domain-containing GPI-anchored protein 2 OS=Arabidopsis thaliana GN=LYM3 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.3e-26
Identity = 75/226 (33.19%), Postives = 118/226 (52.21%), Query Frame = 1


Query: 32  CSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMNTSS--SFSLPASQKI 91
           CSS   C SL+ Y       V +V  LF V  + S L +N+  ++     +  LPA   +
Sbjct: 31  CSSKDTCNSLLGYTLYTDLKVTEVASLFQVDPV-SMLLSNSIDISYPDVENHVLPAKLFL 90

Query: 92  KIPFNCKCENGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIPDPNKIEV 151
           KIP  C C +G   S     YK ++ +TL  IA+  +  LV+  QI  AN   D + ++V
Sbjct: 91  KIPITCSCVDGIRKSLSTH-YKTRTSDTLGSIADSVYGGLVSPEQIQVANSETDLSVLDV 150

Query: 152 GQELWIPLPCSCDDV--EGNKVVHYGHLVESGSSVSAIATRFNVSEATILKLNGIADARD 211
           G +L IPLPC+C +   E    ++  ++V    +++ IA RF+ S   +  +N +  A D
Sbjct: 151 GTKLVIPLPCACFNGTDESLPALYLSYVVRGIDTMAGIAKRFSTSVTDLTNVNAMG-APD 210

Query: 212 LKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCEC 254
           +    +L +PL ACSS   + + D+  ++PNG+Y  TA +CV C C
Sbjct: 211 INPGDILAVPLLACSSNFPKYATDYGLIIPNGSYALTAGHCVQCSC 253

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BLAST of Cp4.1LG04g04560 vs. TrEMBL
Match: A0A0A0K4W1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G024010 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 3.1e-116
Identity = 230/358 (64.25%), Postives = 256/358 (71.51%), Query Frame = 1


Query: 7   TMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLS 66
           T+ F ++VFSAI  + +AQ PPRFNCSSTSKC SLIDYI PNATT+G V KLF VKHLLS
Sbjct: 8   TILFTLLVFSAIATLSLAQTPPRFNCSSTSKCHSLIDYISPNATTIGAVQKLFQVKHLLS 67

Query: 67  FLGANNFPMNTSSSFSLPASQKIKIPFNCKCENGTGLSDKRPIYKVQSGNTLDKIAEITF 126
            LGANN P NT S+FSLPAS+KIKIPFNCKC NGTGLSDKRPIY VQSG++LDKIAE+TF
Sbjct: 68  LLGANNLPANTLSNFSLPASRKIKIPFNCKCNNGTGLSDKRPIYTVQSGDSLDKIAEVTF 127

Query: 127 ARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVESGSSVSAIA 186
           ARLVT LQI  AN IPDP KI+VGQELWIPLPCSCD+V+GN+VVHYGHLVE GSS+SAIA
Sbjct: 128 ARLVTFLQIQIANEIPDPRKIDVGQELWIPLPCSCDEVDGNRVVHYGHLVEMGSSISAIA 187

Query: 187 TRFNVSEATILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTAN 246
            R+NVSE TILKLNGIAD + L+ASQVLDIPLKACSSVIRQDSLDFPFLL N TYDYTAN
Sbjct: 188 GRYNVSEETILKLNGIADPKGLQASQVLDIPLKACSSVIRQDSLDFPFLLSNDTYDYTAN 247

Query: 247 NCVLCECDAAKNMIT-----------------TTCAYAGFSKQTIFTNISTLN-----TC 306
           NCVLC+CDAAKN I                  ++C         +    ST +     TC
Sbjct: 248 NCVLCQCDAAKNWILDCKPSPLKPSSVKSSNWSSCPTMACEGSNLLLGNSTASDCNTTTC 307

Query: 307 PGPEGGPQ------------DNP----NSASRTGSQGLKLVGLVVFMHLLSFGSLLIQ 327
                  Q              P    N ASRTGSQGL L  LV   H+L+   LLIQ
Sbjct: 308 AYAGFSKQTIFTNISTLNTCPGPSDNGNGASRTGSQGLNLAYLVAITHVLALSLLLIQ 365

[Close]

BLAST of Cp4.1LG04g04560 vs. TrEMBL
Match: B9SIJ2_RICCO (LysM domain GPI-anchored protein 2, putative OS=Ricinus communis GN=RCOM_1419770 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 7.8e-75
Identity = 155/359 (43.18%), Postives = 211/359 (58.77%), Query Frame = 1


Query: 1   MASGAGTMFFRVIVFSAIVAVCVAQPPPRFNC--SSTSKCGSLIDYIPPNATTVGDVMKL 60
           M   +      +++ + + A+  + P   F C  SS+S C +LIDYIPPN T++  +  L
Sbjct: 1   MGLSSTEFLLNLLLLTVLFAISTSAP---FKCTSSSSSTCHALIDYIPPNTTSLSSLKTL 60

Query: 61  FDVKHLLSFLGANNFPMNTSSSFSLPASQKIKIPFNCKCENGTGLSDKRPIYKVQSGNTL 120
           F VK+L S LGANN P++T S+ ++PA   IKIPF C C NGTG+S+ +PIY VQ G+ L
Sbjct: 61  FSVKNLRSILGANNLPLSTPSNNNVPAQTTIKIPFPCICSNGTGISNSKPIYIVQPGDIL 120

Query: 121 DKIAEITFARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVES 180
           D IA   F+ LVT  +IAA N IPD N IE GQ+L IPLPCSCD+V G +VVHYGH+VES
Sbjct: 121 DHIAREVFSGLVTFQEIAAVNSIPDANVIEAGQKLRIPLPCSCDEVGGERVVHYGHIVES 180

Query: 181 GSSVSAIATRFNVSEATILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPN 240
           GS++  IA  +  S+  ++ LN   +   L A Q+LD+PL+AC+S +   SLD+P L+PN
Sbjct: 181 GSTLEVIAEEYGTSKDILMSLNNGVNDTSLLAGQILDVPLQACNSSVTTSSLDYPLLVPN 240

Query: 241 GTYDYTANNCVLCECDAAKNMI-------------------------------------- 300
           GTY +TAN+CV C+CD+A N I                                      
Sbjct: 241 GTYAFTANSCVRCKCDSANNWILQCEPSGLTIANSTWSTCPPMKCDGADNLSIGNSTNAG 300

Query: 301 --TTTCAYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGLKLVGLVVFMHL 318
             TTTCAYAGFS QTI T ++T++TCP    G      S +   S G+    L++ +HL
Sbjct: 301 CNTTTCAYAGFSNQTILTALATVSTCPASTPG----SGSDNYASSSGMSWKFLIISLHL 352

[Close]

BLAST of Cp4.1LG04g04560 vs. TrEMBL
Match: M5W420_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008092mg PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 2.3e-74
Identity = 130/229 (56.77%), Postives = 174/229 (75.98%), Query Frame = 1


Query: 30  FNCSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMNTSSSFSLPASQKI 89
           FNCS+T+ C SLIDY+P N TT+  +  LF++ HL + LGANN P++T+ + ++ A QKI
Sbjct: 35  FNCSATTTCQSLIDYVPENTTTLNAIKTLFNISHLRTLLGANNLPLSTAPTQNVTALQKI 94

Query: 90  KIPFNCKCENGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIPDPNKIEV 149
            IPF C C NGTG+S+KRP Y V+ G+ LD IA + F+RLV   +IAA N IPDP+ I +
Sbjct: 95  LIPFTCLCSNGTGVSNKRPQYIVKPGDDLDHIATVVFSRLVKYQEIAAVNNIPDPSLIGI 154

Query: 150 GQELWIPLPCSCDDVEGNKVVHYGHLVESGSSVSAIATRFNVSEATILKLNGIADARDLK 209
           G++LWIPLPCSCD+V G +VVHYGH+VE+GSSV AIAT++   + T+L++NGIAD + L+
Sbjct: 155 GKKLWIPLPCSCDEVNGERVVHYGHVVEAGSSVEAIATKYGTDQETLLRINGIADPKTLQ 214

Query: 210 ASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCECDAAKN 259
           A+QVLD+PLKACSS +  +SLD P L+ N TY +TANNCV C+C  A N
Sbjct: 215 ANQVLDVPLKACSSSVSNNSLDAPLLVSNNTYVFTANNCVKCQCSPANN 263

[Close]

BLAST of Cp4.1LG04g04560 vs. TrEMBL
Match: F6I0V8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g03220 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 5.6e-73
Identity = 148/324 (45.68%), Postives = 194/324 (59.88%), Query Frame = 1


Query: 4   GAGTMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCGSLIDYIPPNATTVGDVMKLFDVKH 63
           G+ T+   +   S ++    AQ    F CSS   C +L+ Y+ PN TT+  +  LF VK+
Sbjct: 2   GSATLLLALSFLSVLITAPRAQAS--FKCSSGPTCNALVGYVSPNTTTLSAIQTLFGVKN 61

Query: 64  LLSFLGANNFPMNTSSSFSLPASQKIKIPFNCKCENGTGLSDKRPIYKVQSGNTLDKIAE 123
             + LGAN+ P +T ++ S+ A  KI IPF C+C NGTG+S+ RP+Y VQ  + L  IA 
Sbjct: 62  FRTLLGANSLPASTPTNQSVAAKDKIVIPFRCRCSNGTGISNHRPVYTVQKDDGLYHIAA 121

Query: 124 ITFARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVESGSSVS 183
             FA LVT  +I A N I D N IEVGQELWIPLPCSCD+V  +KVVHYGH+VESGSSV+
Sbjct: 122 EVFAGLVTYQEIQAVNNISDANLIEVGQELWIPLPCSCDEVNESKVVHYGHVVESGSSVA 181

Query: 184 AIATRFNVSEATILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDY 243
            IA ++  +E T+L+LN I D ++LKA  VLD+PLKAC+SV++  SLD+P LL NGTY Y
Sbjct: 182 EIAEKYGTTEETLLELNNITDPKNLKAGDVLDVPLKACTSVVKNTSLDYPLLLSNGTYAY 241

Query: 244 TANNCVLCECDAAKNMIT------------------------------------TTCAYA 292
           TANNCV C+C +A N                                       TTCAYA
Sbjct: 242 TANNCVKCQCYSANNWTLQCEQSGLNITNGTCPSMECGSSGLSIGNSTSTTCNRTTCAYA 301

[Close]

BLAST of Cp4.1LG04g04560 vs. TrEMBL
Match: A0A0H3W5D2_POPCA (CEBiP1 OS=Populus canadensis PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.2e-72
Identity = 152/311 (48.87%), Postives = 193/311 (62.06%), Query Frame = 1


Query: 30  FNCSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMNTSSSFSLPASQKI 89
           F C++ + C SLIDYI PNATT   +  LF VK++ S L ANN P++T  + ++PASQ I
Sbjct: 27  FKCNTPTTCHSLIDYISPNATTFSHIKTLFSVKNIHSILAANNLPLSTLPNSTIPASQPI 86

Query: 90  KIPFNCKCENGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIPDPNKIEV 149
           KI F C C N TG S+K+PIY VQ  + L  IA   F+ LVT  +IAA N IPD N I+V
Sbjct: 87  KISFPCMCINNTGHSNKQPIYTVQKDDGLSHIAAEVFSGLVTYQEIAAVNNIPDVNLIKV 146

Query: 150 GQELWIPLPCSCDDVEGNKVVHYGHLVESGSSVSAIATRFNVSEATILKLNGIADARDLK 209
           GQ+LWIPLPC+CDDV+G KVVHYGH+VE+GSS+  IA  +  S  T++KLNG+ D+  L 
Sbjct: 147 GQKLWIPLPCNCDDVDGVKVVHYGHVVEAGSSLELIAQEYGTSTDTLVKLNGVNDS-SLL 206

Query: 210 ASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCECDAAKNMIT-------- 269
           A QVLD+PL+AC+S +  DS+D+P L+PN TY +TANNCV C+CDAA N           
Sbjct: 207 AGQVLDVPLQACNSSVSSDSVDYPLLVPNSTYFFTANNCVKCKCDAANNWTLQCEASGIK 266

Query: 270 -----------------------------TTCAYAGFSK-QTIFTNISTLNTCPGPEGGP 303
                                        TTCAYAGFSK Q+IFT ++T + CP      
Sbjct: 267 PSNWSTCPAMQCEGGLLSIDNSTTSGCNITTCAYAGFSKNQSIFTTLATRSICPVTAA-- 326

[Close]

BLAST of Cp4.1LG04g04560 vs. TAIR10
Match: AT2G17120.1 (AT2G17120.1 lysm domain GPI-anchored protein 2 precursor)

HSP 1 Score: 247.3 bits (630), Expect = 1.3e-65
Identity = 125/264 (47.35%), Postives = 166/264 (62.88%), Query Frame = 1


Query: 24  AQPPPRFNCS-STSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMNTSSSFS 83
           AQ    FNCS STS C SL+ Y   NATT+ ++  LF VK+L S LGANN P+NTS    
Sbjct: 23  AQMTGNFNCSGSTSTCQSLVGYSSKNATTLRNIQTLFAVKNLRSILGANNLPLNTSRDQR 82

Query: 84  LPASQKIKIPFNCKCENGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIP 143
           +  +Q +++P +C C NGTG+S++   Y ++  + L  +A   F  LVT  +I+  N IP
Sbjct: 83  VNPNQVVRVPIHCSCSNGTGVSNRDIEYTIKKDDILSFVATEIFGGLVTYEKISEVNKIP 142

Query: 144 DPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVESGSSVSAIATRFNVSEATILKLNGI 203
           DPNKIE+GQ+ WIPLPCSCD + G  VVHY H+V+ GSS+  IA +F     T+ +LNGI
Sbjct: 143 DPNKIEIGQKFWIPLPCSCDKLNGEDVVHYAHVVKLGSSLGEIAAQFGTDNTTLAQLNGI 202

Query: 204 ADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCECDAAKNMITT 263
                L A + LD+PLKACSS +R+DSLD P LL N +Y +TANNCV C CDA KN  T 
Sbjct: 203 IGDSQLLADKPLDVPLKACSSSVRKDSLDAPLLLSNNSYVFTANNCVKCTCDALKNW-TL 262

Query: 264 TCAYAGFSKQTIFTNISTLNTCPG 287
           +C  +   K + +      + C G
Sbjct: 263 SCQSSSEIKPSNWQTCPPFSQCDG 285

[Close]

BLAST of Cp4.1LG04g04560 vs. TAIR10
Match: AT1G21880.2 (AT1G21880.2 lysm domain GPI-anchored protein 1 precursor)

HSP 1 Score: 122.5 bits (306), Expect = 4.9e-28
Identity = 86/299 (28.76%), Postives = 139/299 (46.49%), Query Frame = 1


Query: 32  CSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMNTSS--SFSLPASQKI 91
           CSS   C +L+ Y       V +V  LF V  + S L AN   ++     +  LP+   +
Sbjct: 34  CSSNDTCNALLGYTLYTDLKVSEVASLFQVDPI-SILLANAIDISYPDVENHILPSKLFL 93

Query: 92  KIPFNCKCENGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIPDPNKIEV 151
           KIP  C C +G   S     YK +  + L  IA+  +  LV++ QI  AN + DP+ ++V
Sbjct: 94  KIPITCSCVDGIRKSVSTH-YKTRPSDNLGSIADSVYGGLVSAEQIQEANSVNDPSLLDV 153

Query: 152 GQELWIPLPCSCDDVEGNKV--VHYGHLVESGSSVSAIATRFNVSEATILKLNGIADARD 211
           G  L IPLPC+C +   N +  V+  ++V+   ++  IA R++ +   ++ +N +  A D
Sbjct: 154 GTSLVIPLPCACFNGTDNSLPAVYLSYVVKEIDTLVGIARRYSTTITDLMNVNAMG-APD 213

Query: 212 LKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCECD-AAKNMI------ 271
           + +  +L +PL AC+S   + + DF  ++PNG+Y   A +CV C C   ++N+       
Sbjct: 214 VSSGDILAVPLSACASKFPRYASDFGLIVPNGSYALAAGHCVQCSCALGSRNLYCEPASL 273

Query: 272 -----------------------------TTTCAYAGFSKQTIFTNI--STLNTCPGPE 289
                                         TTC Y G +  TI T +  S    CPGP+
Sbjct: 274 AVSCSSMQCRNSNLMLGNITVQQTSAGCNVTTCDYNGIANGTILTMLTRSLQPRCPGPQ 329

[Close]

BLAST of Cp4.1LG04g04560 vs. TAIR10
Match: AT1G77630.1 (AT1G77630.1 Peptidoglycan-binding LysM domain-containing protein)

HSP 1 Score: 119.4 bits (298), Expect = 4.1e-27
Identity = 75/226 (33.19%), Postives = 118/226 (52.21%), Query Frame = 1


Query: 32  CSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMNTSS--SFSLPASQKI 91
           CSS   C SL+ Y       V +V  LF V  + S L +N+  ++     +  LPA   +
Sbjct: 31  CSSKDTCNSLLGYTLYTDLKVTEVASLFQVDPV-SMLLSNSIDISYPDVENHVLPAKLFL 90

Query: 92  KIPFNCKCENGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIPDPNKIEV 151
           KIP  C C +G   S     YK ++ +TL  IA+  +  LV+  QI  AN   D + ++V
Sbjct: 91  KIPITCSCVDGIRKSLSTH-YKTRTSDTLGSIADSVYGGLVSPEQIQVANSETDLSVLDV 150

Query: 152 GQELWIPLPCSCDDV--EGNKVVHYGHLVESGSSVSAIATRFNVSEATILKLNGIADARD 211
           G +L IPLPC+C +   E    ++  ++V    +++ IA RF+ S   +  +N +  A D
Sbjct: 151 GTKLVIPLPCACFNGTDESLPALYLSYVVRGIDTMAGIAKRFSTSVTDLTNVNAMG-APD 210

Query: 212 LKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCEC 254
           +    +L +PL ACSS   + + D+  ++PNG+Y  TA +CV C C
Sbjct: 211 INPGDILAVPLLACSSNFPKYATDYGLIIPNGSYALTAGHCVQCSC 253

[Close]

BLAST of Cp4.1LG04g04560 vs. TAIR10
Match: AT2G23770.1 (AT2G23770.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein)

HSP 1 Score: 50.4 bits (119), Expect = 2.4e-06
Identity = 45/179 (25.14%), Postives = 79/179 (44.13%), Query Frame = 1


Query: 30  FNCSSTSK-CGSLIDY-IPPNATTVGDVMKLFDVK-HLLSFLGANNFPMNTSSSFSLPAS 89
           ++C+  +K C + + +   P+ +TV  +  LF V   L+S L       + S S S P+ 
Sbjct: 46  YSCNGLNKTCQAYVIFRSTPSFSTVTSISSLFSVDPSLVSSLN------DASPSTSFPSG 105

Query: 90  QKIKIPFNCKCENGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIPDPNK 149
           Q++ IP  C C      S     Y +Q  ++   IA  T   L T   +A  N +     
Sbjct: 106 QQVIIPLTCSCTGDD--SQSNITYTIQPNDSYFAIANDTLQGLSTCQALAKQNNV-SSQS 165

Query: 150 IEVGQELWIPLPCSCD-----DVEGNKVVHYGHLVESGSSVSAIATRFNVSEATILKLN 201
           +  G  + +P+ C+C      + +G K +   + V    +++ I+ RF V  +  LK N
Sbjct: 166 LFPGMRIVVPIRCACPTAKQINEDGVKYL-MSYTVVFEDTIAIISDRFGVETSKTLKAN 214

[Close]

BLAST of Cp4.1LG04g04560 vs. NCBI nr
Match: gi|659094070|ref|XP_008447867.1| (PREDICTED: lysM domain-containing GPI-anchored protein 2 [Cucumis melo])

HSP 1 Score: 433.3 bits (1113), Expect = 3.7e-118
Identity = 232/357 (64.99%), Postives = 259/357 (72.55%), Query Frame = 1


Query: 7   TMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLS 66
           T+ F ++VFSAI  V +AQ PPRFNCSSTSKC SLIDYIPPNATT+  V KLF VKHLLS
Sbjct: 8   TILFTLLVFSAIATVSLAQTPPRFNCSSTSKCHSLIDYIPPNATTIAAVQKLFQVKHLLS 67

Query: 67  FLGANNFPMNTSSSFSLPASQKIKIPFNCKCENGTGLSDKRPIYKVQSGNTLDKIAEITF 126
           FLGANN P NT S+FSLPAS+KIKIPFNCKC NGTGLSDKRPIY VQSG++LDKIAE TF
Sbjct: 68  FLGANNLPANTLSNFSLPASRKIKIPFNCKCNNGTGLSDKRPIYTVQSGDSLDKIAESTF 127

Query: 127 ARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVESGSSVSAIA 186
           ARLVT LQI  AN +PDPNKI+VGQELWIPLPCSCD+V+GN+VVHYGHLVESGSS+SAI 
Sbjct: 128 ARLVTFLQIQIANKLPDPNKIDVGQELWIPLPCSCDEVDGNRVVHYGHLVESGSSISAIG 187

Query: 187 TRFNVSEATILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTAN 246
            R+NVSE TIL+LNGIAD +DL+ASQVLDIPLKACSS+IRQDSLDFPFLL N TYDYTAN
Sbjct: 188 GRYNVSEETILRLNGIADPKDLQASQVLDIPLKACSSMIRQDSLDFPFLLSNDTYDYTAN 247

Query: 247 NCVLCECDAAKNMIT-----------------TTCAYAGFSKQTIFTNISTLN-----TC 306
           NCVLC+CDAAKN I                  ++C         +    ST +     TC
Sbjct: 248 NCVLCQCDAAKNWILDCKPSQLKPSSVKSSNWSSCPAMACEGSNLLLGNSTASDCNTTTC 307

Query: 307 PGPEGGPQ------------DNP----NSASRTGSQGLKLVGLVVFMHLLSFGSLLI 326
                  Q              P    N ASRT SQGL L  LV F H+L+FG LLI
Sbjct: 308 AYAGFSKQTIFTNISTLNTCPGPEDNGNGASRTASQGLNLAYLVAFTHVLAFGLLLI 364

[Close]

BLAST of Cp4.1LG04g04560 vs. NCBI nr
Match: gi|449473230|ref|XP_004153824.1| (PREDICTED: lysM domain-containing GPI-anchored protein 2 [Cucumis sativus])

HSP 1 Score: 426.4 bits (1095), Expect = 4.5e-116
Identity = 230/358 (64.25%), Postives = 256/358 (71.51%), Query Frame = 1


Query: 7   TMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCGSLIDYIPPNATTVGDVMKLFDVKHLLS 66
           T+ F ++VFSAI  + +AQ PPRFNCSSTSKC SLIDYI PNATT+G V KLF VKHLLS
Sbjct: 8   TILFTLLVFSAIATLSLAQTPPRFNCSSTSKCHSLIDYISPNATTIGAVQKLFQVKHLLS 67

Query: 67  FLGANNFPMNTSSSFSLPASQKIKIPFNCKCENGTGLSDKRPIYKVQSGNTLDKIAEITF 126
            LGANN P NT S+FSLPAS+KIKIPFNCKC NGTGLSDKRPIY VQSG++LDKIAE+TF
Sbjct: 68  LLGANNLPANTLSNFSLPASRKIKIPFNCKCNNGTGLSDKRPIYTVQSGDSLDKIAEVTF 127

Query: 127 ARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVESGSSVSAIA 186
           ARLVT LQI  AN IPDP KI+VGQELWIPLPCSCD+V+GN+VVHYGHLVE GSS+SAIA
Sbjct: 128 ARLVTFLQIQIANEIPDPRKIDVGQELWIPLPCSCDEVDGNRVVHYGHLVEMGSSISAIA 187

Query: 187 TRFNVSEATILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTAN 246
            R+NVSE TILKLNGIAD + L+ASQVLDIPLKACSSVIRQDSLDFPFLL N TYDYTAN
Sbjct: 188 GRYNVSEETILKLNGIADPKGLQASQVLDIPLKACSSVIRQDSLDFPFLLSNDTYDYTAN 247

Query: 247 NCVLCECDAAKNMIT-----------------TTCAYAGFSKQTIFTNISTLN-----TC 306
           NCVLC+CDAAKN I                  ++C         +    ST +     TC
Sbjct: 248 NCVLCQCDAAKNWILDCKPSPLKPSSVKSSNWSSCPTMACEGSNLLLGNSTASDCNTTTC 307

Query: 307 PGPEGGPQ------------DNP----NSASRTGSQGLKLVGLVVFMHLLSFGSLLIQ 327
                  Q              P    N ASRTGSQGL L  LV   H+L+   LLIQ
Sbjct: 308 AYAGFSKQTIFTNISTLNTCPGPSDNGNGASRTGSQGLNLAYLVAITHVLALSLLLIQ 365

[Close]

BLAST of Cp4.1LG04g04560 vs. NCBI nr
Match: gi|802563927|ref|XP_012067148.1| (PREDICTED: lysM domain-containing GPI-anchored protein 2 isoform X1 [Jatropha curcas])

HSP 1 Score: 312.0 bits (798), Expect = 1.2e-81
Identity = 160/338 (47.34%), Postives = 211/338 (62.43%), Query Frame = 1


Query: 1   MASGAGTMFFRVIVFSAIVAVCVAQPPPRFNCSSTSKCGSLIDYIPPNATTVGDVMKLFD 60
           M   +  +   +++F+A+    ++QP   F C+++ +C +LIDY+ PN+TT+ D+  LF 
Sbjct: 51  MILSSAPLLLSLLLFAALATSSLSQP---FKCTTSGQCNALIDYVAPNSTTISDIRTLFS 110

Query: 61  VKHLLSFLGANNFPMNTSSSFSLPASQKIKIPFNCKCENGTGLSDKRPIYKVQSGNTLDK 120
           +K+L S LGANN P++TS + ++ A+Q IKIPF CKC NGTG+S+K+PIY VQ G+ LD 
Sbjct: 111 IKNLRSILGANNLPLSTSPNQTIAAAQTIKIPFPCKCSNGTGISNKKPIYTVQPGDGLDH 170

Query: 121 IAEITFARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVESGS 180
           IA   F+ LVT  QIAA N IPD NKI VGQEL IPLPCSCDDV G KVVHYGH+VESGS
Sbjct: 171 IARDVFSALVTYEQIAAVNNIPDVNKILVGQELQIPLPCSCDDVGGEKVVHYGHVVESGS 230

Query: 181 SVSAIATRFNVSEATILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGT 240
           S+  IA  +  +  T++ LN I +A  LKA QVLD+PLKAC+S +   S+D+P L+PNGT
Sbjct: 231 SLDLIAQEYGTTMTTLMTLNSITNASSLKAGQVLDVPLKACNSSVSTTSIDYPLLVPNGT 290

Query: 241 YDYTANNCVLCECDAAKNMI---------------------------------------- 295
           Y +TAN+CV C CDAA N                                          
Sbjct: 291 YFFTANSCVKCNCDAANNWTLQCEPSGFRPAAKSTWSTCPSMRCDGATSLLLSNTTTTGC 350

[Close]

BLAST of Cp4.1LG04g04560 vs. NCBI nr
Match: gi|255569692|ref|XP_002525811.1| (PREDICTED: lysM domain-containing GPI-anchored protein 2 [Ricinus communis])

HSP 1 Score: 288.9 bits (738), Expect = 1.1e-74
Identity = 155/359 (43.18%), Postives = 211/359 (58.77%), Query Frame = 1


Query: 1   MASGAGTMFFRVIVFSAIVAVCVAQPPPRFNC--SSTSKCGSLIDYIPPNATTVGDVMKL 60
           M   +      +++ + + A+  + P   F C  SS+S C +LIDYIPPN T++  +  L
Sbjct: 1   MGLSSTEFLLNLLLLTVLFAISTSAP---FKCTSSSSSTCHALIDYIPPNTTSLSSLKTL 60

Query: 61  FDVKHLLSFLGANNFPMNTSSSFSLPASQKIKIPFNCKCENGTGLSDKRPIYKVQSGNTL 120
           F VK+L S LGANN P++T S+ ++PA   IKIPF C C NGTG+S+ +PIY VQ G+ L
Sbjct: 61  FSVKNLRSILGANNLPLSTPSNNNVPAQTTIKIPFPCICSNGTGISNSKPIYIVQPGDIL 120

Query: 121 DKIAEITFARLVTSLQIAAANGIPDPNKIEVGQELWIPLPCSCDDVEGNKVVHYGHLVES 180
           D IA   F+ LVT  +IAA N IPD N IE GQ+L IPLPCSCD+V G +VVHYGH+VES
Sbjct: 121 DHIAREVFSGLVTFQEIAAVNSIPDANVIEAGQKLRIPLPCSCDEVGGERVVHYGHIVES 180

Query: 181 GSSVSAIATRFNVSEATILKLNGIADARDLKASQVLDIPLKACSSVIRQDSLDFPFLLPN 240
           GS++  IA  +  S+  ++ LN   +   L A Q+LD+PL+AC+S +   SLD+P L+PN
Sbjct: 181 GSTLEVIAEEYGTSKDILMSLNNGVNDTSLLAGQILDVPLQACNSSVTTSSLDYPLLVPN 240

Query: 241 GTYDYTANNCVLCECDAAKNMI-------------------------------------- 300
           GTY +TAN+CV C+CD+A N I                                      
Sbjct: 241 GTYAFTANSCVRCKCDSANNWILQCEPSGLTIANSTWSTCPPMKCDGADNLSIGNSTNAG 300

Query: 301 --TTTCAYAGFSKQTIFTNISTLNTCPGPEGGPQDNPNSASRTGSQGLKLVGLVVFMHL 318
             TTTCAYAGFS QTI T ++T++TCP    G      S +   S G+    L++ +HL
Sbjct: 301 CNTTTCAYAGFSNQTILTALATVSTCPASTPG----SGSDNYASSSGMSWKFLIISLHL 352

[Close]

BLAST of Cp4.1LG04g04560 vs. NCBI nr
Match: gi|645260680|ref|XP_008235939.1| (PREDICTED: lysM domain-containing GPI-anchored protein 2 [Prunus mume])

HSP 1 Score: 287.7 bits (735), Expect = 2.5e-74
Identity = 154/328 (46.95%), Postives = 207/328 (63.11%), Query Frame = 1


Query: 30  FNCSSTSK---CGSLIDYIPPNATTVGDVMKLFDVKHLLSFLGANNFPMNTSS-SFSLPA 89
           FNCS+T+    C SLIDYIP N TT+  +  LF++ HL + LGANN P++TSS + ++ A
Sbjct: 37  FNCSATTTTTTCQSLIDYIPQNTTTLNAIKTLFNISHLRTLLGANNLPLSTSSPTQNVTA 96

Query: 90  SQKIKIPFNCKCENGTGLSDKRPIYKVQSGNTLDKIAEITFARLVTSLQIAAANGIPDPN 149
            +KI IPF C C NGTG+S+KRP Y V+ G+ LD IA + F+ LV   +IAA N IPDP+
Sbjct: 97  LKKILIPFTCLCSNGTGVSNKRPQYIVKPGDNLDHIATVVFSGLVKYQEIAAVNKIPDPS 156

Query: 150 KIEVGQELWIPLPCSCDDVEGNKVVHYGHLVESGSSVSAIATRFNVSEATILKLNGIADA 209
            I++GQ+LWIPLPCSCD+V G +VVHYGH+VE+GSSV AIA  +   + T+L++NGIAD 
Sbjct: 157 LIQIGQKLWIPLPCSCDEVNGERVVHYGHVVEAGSSVEAIAIEYGTDQETLLRINGIADP 216

Query: 210 RDLKASQVLDIPLKACSSVIRQDSLDFPFLLPNGTYDYTANNCVLCECDAAKN------- 269
           + L+A+QVLD+PLKACSS +   SLD P L+ N TY +TANNCV C+C +A N       
Sbjct: 217 KTLQANQVLDVPLKACSSSVSNSSLDAPLLVSNNTYVFTANNCVKCQCSSASNWTLQCEP 276

Query: 270 --MITTTCAY--------------------------AGFSKQT-IFTNISTLNTCPGPEG 318
             + +T C                            AG++ +T + T ++T +TC  P  
Sbjct: 277 STVNSTGCLAMQCQDSSQLFLGNTTTSGCDQTTCTYAGYTNKTNVLTTLTTQSTCAAP-- 336

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g04560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LYM2_ARATH	2.3e-64	47.35	LysM domain-containing GPI-anchored protein 2 OS=Arabidopsis thaliana GN=LYM2 PE...	[more]
CEBIP_ORYSJ	2.9e-54	39.68	Chitin elicitor-binding protein OS=Oryza sativa subsp. japonica GN=CEBIP PE=1 SV...	[more]
LYM1_ARATH	8.7e-27	28.76	LysM domain-containing GPI-anchored protein 1 OS=Arabidopsis thaliana GN=LYM1 PE...	[more]
LYM3_ARATH	7.3e-26	33.19	LysM domain-containing GPI-anchored protein 2 OS=Arabidopsis thaliana GN=LYM3 PE...	[more]

BLAST of Cp4.1LG04g04560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4W1_CUCSA	3.1e-116	64.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G024010 PE=4 SV=1	[more]
B9SIJ2_RICCO	7.8e-75	43.18	LysM domain GPI-anchored protein 2, putative OS=Ricinus communis GN=RCOM_1419770...	[more]
M5W420_PRUPE	2.3e-74	56.77	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008092mg PE=4 SV=1	[more]
F6I0V8_VITVI	5.6e-73	45.68	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g03220 PE=4 SV=...	[more]
A0A0H3W5D2_POPCA	1.2e-72	48.87	CEBiP1 OS=Populus canadensis PE=2 SV=1	[more]

BLAST of Cp4.1LG04g04560 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17120.1	1.3e-65	47.35	lysm domain GPI-anchored protein 2 precursor	[more]
AT1G21880.2	4.9e-28	28.76	lysm domain GPI-anchored protein 1 precursor	[more]
AT1G77630.1	4.1e-27	33.19	Peptidoglycan-binding LysM domain-containing protein	[more]
AT2G23770.1	2.4e-06	25.14	protein kinase family protein / peptidoglycan-binding LysM domain-co...	[more]

BLAST of Cp4.1LG04g04560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659094070\|ref\|XP_008447867.1\|	3.7e-118	64.99	PREDICTED: lysM domain-containing GPI-anchored protein 2 [Cucumis melo]	[more]
gi\|449473230\|ref\|XP_004153824.1\|	4.5e-116	64.25	PREDICTED: lysM domain-containing GPI-anchored protein 2 [Cucumis sativus]	[more]
gi\|802563927\|ref\|XP_012067148.1\|	1.2e-81	47.34	PREDICTED: lysM domain-containing GPI-anchored protein 2 isoform X1 [Jatropha cu...	[more]
gi\|255569692\|ref\|XP_002525811.1\|	1.1e-74	43.18	PREDICTED: lysM domain-containing GPI-anchored protein 2 [Ricinus communis]	[more]
gi\|645260680\|ref\|XP_008235939.1\|	2.5e-74	46.95	PREDICTED: lysM domain-containing GPI-anchored protein 2 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018392	LysM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006855	drug transmembrane transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0015238	drug transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g04560.1	Cp4.1LG04g04560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018392	LysM domain	GENE3D	G3DSA:3.10.350.10		coord: 174..217 score: 9.3E-8coord: 109..156 score: 1.
IPR018392	LysM domain	PFAM	PF01476	LysM	coord: 110..156 score: 1.7E-8coord: 174..217 score: 1.
IPR018392	LysM domain	SMART	SM00257	LysM_2	coord: 109..156 score: 4.3E-8coord: 173..217 score: 7.
IPR018392	LysM domain	unknown	SSF54106	LysM domain	coord: 173..217 score: 5.89E-6coord: 109..157 score: 1.5
None	No IPR available	PANTHER	PTHR33734	FAMILY NOT NAMED	coord: 1..326 score: 1.5E
None	No IPR available	PANTHER	PTHR33734:SF5	LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2	coord: 1..326 score: 1.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG04g04560	Cucsa.099560	Cucumber (Gy14) v1	cgycpeB0208
Cp4.1LG04g04560	CmaCh11G013420	Cucurbita maxima (Rimu)	cmacpeB154
Cp4.1LG04g04560	CmoCh11G017780	Cucurbita moschata (Rifu)	cmocpeB126
Cp4.1LG04g04560	Cla015756	Watermelon (97103) v1	cpewmB674
Cp4.1LG04g04560	Csa7G024010	Cucumber (Chinese Long) v2	cpecuB690
Cp4.1LG04g04560	MELO3C013264	Melon (DHL92) v3.5.1	cpemeB610
Cp4.1LG04g04560	ClCG02G003560	Watermelon (Charleston Gray)	cpewcgB597
Cp4.1LG04g04560	CSPI07G01630	Wild cucumber (PI 183967)	cpecpiB692
Cp4.1LG04g04560	Lsi11G012760	Bottle gourd (USVL1VR-Ls)	cpelsiB526
Cp4.1LG04g04560	MELO3C013264.2	Melon (DHL92) v3.6.1	cpemedB722
Cp4.1LG04g04560	CsaV3_7G001750	Cucumber (Chinese Long) v3	cpecucB0863
Cp4.1LG04g04560	Bhi05G001369	Wax gourd	cpewgoB0851
Cp4.1LG04g04560	CsGy7G001570	Cucumber (Gy14) v2	cgybcpeB964
Cp4.1LG04g04560	Carg26360	Silver-seed gourd	carcpeB1460

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG04g04560	Cucurbita pepo (Zucchini)	cpecpeB244
Cp4.1LG04g04560	Cucurbita pepo (Zucchini)	cpecpeB267
Cp4.1LG04g04560	Cucurbita pepo (Zucchini)	cpecpeB304
Cp4.1LG04g04560	Cucurbita pepo (Zucchini)	cpecpeB495
Cp4.1LG04g04560	Cucumber (Gy14) v1	cgycpeB0851
Cp4.1LG04g04560	Cucurbita maxima (Rimu)	cmacpeB357
Cp4.1LG04g04560	Cucurbita maxima (Rimu)	cmacpeB497
Cp4.1LG04g04560	Cucurbita maxima (Rimu)	cmacpeB537
Cp4.1LG04g04560	Cucurbita maxima (Rimu)	cmacpeB575
Cp4.1LG04g04560	Cucurbita maxima (Rimu)	cmacpeB641
Cp4.1LG04g04560	Cucurbita moschata (Rifu)	cmocpeB320
Cp4.1LG04g04560	Cucurbita moschata (Rifu)	cmocpeB456
Cp4.1LG04g04560	Cucurbita moschata (Rifu)	cmocpeB492
Cp4.1LG04g04560	Cucurbita moschata (Rifu)	cmocpeB525
Cp4.1LG04g04560	Melon (DHL92) v3.5.1	cpemeB639
Cp4.1LG04g04560	Melon (DHL92) v3.6.1	cpemedB766
Cp4.1LG04g04560	Silver-seed gourd	carcpeB0288
Cp4.1LG04g04560	Silver-seed gourd	carcpeB0487
Cp4.1LG04g04560	Silver-seed gourd	carcpeB1193