Cp4.1LG04g04340 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g04340
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAT4g35320/F23E12_120
LocationCp4.1LG04 : 6584293 .. 6584754 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTCCATTCCACGGCGGAGCTTTCTTCCTACGCGGCCTCTCAACGACGCGCTCCCTGTCTCGCAGCCGGACTCCACACAGACGCTACGCCGAAGGCTCTCTTCGATTTCCTTCAAGATCCAGCCGATTTCTTCGCCTGTTACTTCCTGGTCGTTTCATAGATCTAAATCGGTGTCTTCTTTGCGCGATCACACTGGCAAATCGCTCCGGAAGTGGTGGGATTGGGGATGGTCCTGGATCCTCTCTCGCAAGGCTGCCTTCGCTCGAGATCTGGAAATGAACGATGAAGAAACAAAATCTCTTAGATCTAATTGCAGAGGTAGTTTCAGACATCTTTTCTATAAGGTTAGGTCTGAGTTCCGCAAACTGATTCGCTCCGATCGCGTCGGTCTTCCTCAAACTTTCAAATACGATTCGGTTAATTACTCGAAGAATTTCGATGACGGTGTGAAATCTTAG

mRNA sequence

ATGACTTCCATTCCACGGCGGAGCTTTCTTCCTACGCGGCCTCTCAACGACGCGCTCCCTGTCTCGCAGCCGGACTCCACACAGACGCTACGCCGAAGGCTCTCTTCGATTTCCTTCAAGATCCAGCCGATTTCTTCGCCTGTTACTTCCTGGTCGTTTCATAGATCTAAATCGGTGTCTTCTTTGCGCGATCACACTGGCAAATCGCTCCGGAAGTGGTGGGATTGGGGATGGTCCTGGATCCTCTCTCGCAAGGCTGCCTTCGCTCGAGATCTGGAAATGAACGATGAAGAAACAAAATCTCTTAGATCTAATTGCAGAGGTAGTTTCAGACATCTTTTCTATAAGGTTAGGTCTGAGTTCCGCAAACTGATTCGCTCCGATCGCGTCGGTCTTCCTCAAACTTTCAAATACGATTCGGTTAATTACTCGAAGAATTTCGATGACGGTGTGAAATCTTAG

Coding sequence (CDS)

ATGACTTCCATTCCACGGCGGAGCTTTCTTCCTACGCGGCCTCTCAACGACGCGCTCCCTGTCTCGCAGCCGGACTCCACACAGACGCTACGCCGAAGGCTCTCTTCGATTTCCTTCAAGATCCAGCCGATTTCTTCGCCTGTTACTTCCTGGTCGTTTCATAGATCTAAATCGGTGTCTTCTTTGCGCGATCACACTGGCAAATCGCTCCGGAAGTGGTGGGATTGGGGATGGTCCTGGATCCTCTCTCGCAAGGCTGCCTTCGCTCGAGATCTGGAAATGAACGATGAAGAAACAAAATCTCTTAGATCTAATTGCAGAGGTAGTTTCAGACATCTTTTCTATAAGGTTAGGTCTGAGTTCCGCAAACTGATTCGCTCCGATCGCGTCGGTCTTCCTCAAACTTTCAAATACGATTCGGTTAATTACTCGAAGAATTTCGATGACGGTGTGAAATCTTAG

Protein sequence

MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS
Homology
[Close]
BLAST of Cp4.1LG04g04340 vs. TrEMBL
Match: A0A0A0K1L8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G027010 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 4.2e-63
Identity = 133/163 (81.60%), Postives = 140/163 (85.89%), Query Frame = 1 

Query: 1   MTSIPRRSFLPTRPLNDALPVSQPD--STQTLRRRLSSISFKIQPISSPVTSWSFHRSKS 60
           MTSIP R FLPT PLNDALP+SQP   STQTLRRRLSSISFKI PISSP+TSWSF RSKS
Sbjct: 1   MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKS 60

Query: 61  VSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMND-----EETKSLRS--NCRGS-- 120
           +SS+RD T  SLRKWWDWGWSWILSRKAAFARDLEMND     E TK+L S  + RGS  
Sbjct: 61  MSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGSTYSSRGSFK 120

Query: 121 FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK 153
           F+HLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK
Sbjct: 121 FKHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK 163

[Close]
BLAST of Cp4.1LG04g04340 vs. TrEMBL
Match: A0A061E1J1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007583 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.5e-47
Identity = 91/138 (65.94%), Postives = 117/138 (84.78%), Query Frame = 1 

Query: 18  ALPVSQPDSTQTL---RRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWW 77
           ALPVSQ +S + L   RRRLSS+S  I+PISSP TSW+FHRSKS+SS+ ++ G S+RKWW
Sbjct: 13  ALPVSQTESKEQLPGLRRRLSSVSLNIKPISSPATSWAFHRSKSLSSMGEYAGGSIRKWW 72

Query: 78  DWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQ 137
           DWGWSW+LSRK  FA+DLEMN+EET+ L  + +GS+RH+FYKVRSE +KL+ SD+VGLPQ
Sbjct: 73  DWGWSWVLSRKPMFAKDLEMNEEETRILGCHNKGSWRHVFYKVRSEVKKLVGSDKVGLPQ 132

Query: 138 TFKYDSVNYSKNFDDGVK 153
           T++Y+S++YSKNFDDG K
Sbjct: 133 TYRYNSLDYSKNFDDGQK 150

[Close]
BLAST of Cp4.1LG04g04340 vs. TrEMBL
Match: W9QTX6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013730 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.1e-46
Identity = 98/152 (64.47%), Postives = 116/152 (76.32%), Query Frame = 1 

Query: 8   SFLPTRPLNDALPVSQP-----DSTQTLRRRLSSISFKIQPISS-PVTSWSFHRSKSVSS 67
           S + T    D LPVSQ      D   ++RRRLSS+S K+QPISS P  SW+F RSKSVS+
Sbjct: 3   SIVQTFQKRDFLPVSQDASSPKDQQPSIRRRLSSLSLKLQPISSSPAASWAFRRSKSVSA 62

Query: 68  LRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGSFRHLFYKVRSEF 127
           + +  G S+RKWWD GW WILSRK  FA DLEMN+EETK+L S+ RGS+RH+FYKVRSE 
Sbjct: 63  MGESAGSSIRKWWDCGWGWILSRKPMFAEDLEMNEEETKALGSHSRGSWRHVFYKVRSEL 122

Query: 128 RKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS 154
           RKL+RSDRVGLPQT +YDS NYSKNFDDG K+
Sbjct: 123 RKLVRSDRVGLPQTCRYDSFNYSKNFDDGRKT 154

[Close]
BLAST of Cp4.1LG04g04340 vs. TrEMBL
Match: A0A0D2SLE5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G216400 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-45
Identity = 88/144 (61.11%), Postives = 116/144 (80.56%), Query Frame = 1 

Query: 16  NDALPVSQPDSTQ---------TLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHT 75
           N +LPVSQ +S            LRRRLSS+S K+QP SSP TSW+F RSKS+SS+ ++ 
Sbjct: 11  NSSLPVSQTESKDHFPPPAGPGLLRRRLSSLSLKLQPTSSPATSWTFPRSKSLSSMGEYA 70

Query: 76  GKSLRKWWDWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGSFRHLFYKVRSEFRKLIR 135
           G S+RKWWDWGWSW+LS+K +FA+D+EMN+EET+ L  + +GS+RH+FYKVRSE RKL+ 
Sbjct: 71  GSSIRKWWDWGWSWVLSKKPSFAKDIEMNEEETRILGCHNKGSWRHVFYKVRSEIRKLVG 130

Query: 136 SDRVGLPQTFKYDSVNYSKNFDDG 151
           SD+VGLPQT++Y+S++YSKNFDDG
Sbjct: 131 SDKVGLPQTYRYNSLDYSKNFDDG 154

[Close]
BLAST of Cp4.1LG04g04340 vs. TrEMBL
Match: A0A067LHY9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10745 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 8.8e-45
Identity = 90/141 (63.83%), Postives = 115/141 (81.56%), Query Frame = 1 

Query: 17  DALPVSQ---PDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKW 76
           ++LPVSQ       Q LRRRLSS+S KIQPI+SP  SW+F RSKSVSS+ ++ G S+RKW
Sbjct: 13  NSLPVSQICDDSKDQGLRRRLSSLSLKIQPIASPAASWAFRRSKSVSSMGEYAGTSIRKW 72

Query: 77  WDWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGSFRHLFYKVRSEFRKLIRSD-RVGL 136
           WDWGWSWILSRK  FA+DLEMN+EET+ L  + +GS+RH+FYKVRSE RK++RS+ +VGL
Sbjct: 73  WDWGWSWILSRKPIFAKDLEMNEEETRILGCHNKGSWRHVFYKVRSEIRKIVRSENKVGL 132

Query: 137 PQTFKYDSVNYSKNFDDGVKS 154
           PQT +YDS +YSKNFD+G+ +
Sbjct: 133 PQTCRYDSFSYSKNFDNGINN 153

[Close]
BLAST of Cp4.1LG04g04340 vs. TAIR10
Match: AT4G35320.1 (AT4G35320.1 unknown protein)

HSP 1 Score: 109.0 bits (271), Expect = 2.6e-24
Identity = 59/130 (45.38%), Postives = 84/130 (64.62%), Query Frame = 1 

Query: 18  ALPVSQ-PDSTQT-------LRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKS 77
           +LPVSQ P++  T       +RRRLSS+S  +    + + +  F RSKSVS++ +  G S
Sbjct: 15  SLPVSQRPNAAATADDEPGLIRRRLSSLSLNLSNQPAAIAA-RFPRSKSVSAMGEQAGSS 74

Query: 78  LRKWWDWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGSFRHLFYKVRSEFRKLI-RSD 137
           +++WW+WGWSWILSRK  F RDLE+N +E KS+ S  RGS  H+F+K+RS+ R  +  S 
Sbjct: 75  VKEWWEWGWSWILSRKPIFIRDLELNKDEAKSIGSQNRGSIMHVFFKLRSQIRNFMGPSS 134

Query: 138 RVGLPQTFKY 139
              LP + KY
Sbjct: 135 EDSLPLSCKY 143

[Close]
BLAST of Cp4.1LG04g04340 vs. TAIR10
Match: AT2G17300.1 (AT2G17300.1 unknown protein)

HSP 1 Score: 96.7 bits (239), Expect = 1.3e-20
Identity = 56/125 (44.80%), Postives = 76/125 (60.80%), Query Frame = 1 

Query: 18  ALPVSQP--DSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWD 77
           +LP+S    D    LRRRLSS+S  +        S    RSKSVS + +  G S+++WW+
Sbjct: 16  SLPISSTTTDEPGLLRRRLSSLSLNLSRNQPSTVS----RSKSVSDMGEQGGSSVKEWWE 75

Query: 78  WGWSWILSRK-AAFARDLEMNDEETK-SLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLP 137
           W WSWIL +K   F  DLE+N  ETK SL +  RGSF H+F+K+RSE R+L+R     LP
Sbjct: 76  WSWSWILLKKLPIFFTDLEVNKNETKSSLGNQQRGSFIHVFFKLRSEIRRLLRPSSDSLP 135

Query: 138 QTFKY 139
            + K+
Sbjct: 136 LSCKH 136

[Close]
BLAST of Cp4.1LG04g04340 vs. NCBI nr
Match: gi|700188125|gb|KGN43358.1| (hypothetical protein Csa_7G027010 [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 6.0e-63
Identity = 133/163 (81.60%), Postives = 140/163 (85.89%), Query Frame = 1 

Query: 1   MTSIPRRSFLPTRPLNDALPVSQPD--STQTLRRRLSSISFKIQPISSPVTSWSFHRSKS 60
           MTSIP R FLPT PLNDALP+SQP   STQTLRRRLSSISFKI PISSP+TSWSF RSKS
Sbjct: 1   MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKS 60

Query: 61  VSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMND-----EETKSLRS--NCRGS-- 120
           +SS+RD T  SLRKWWDWGWSWILSRKAAFARDLEMND     E TK+L S  + RGS  
Sbjct: 61  MSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGSTYSSRGSFK 120

Query: 121 FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK 153
           F+HLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK
Sbjct: 121 FKHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK 163

[Close]
BLAST of Cp4.1LG04g04340 vs. NCBI nr
Match: gi|1009141847|ref|XP_015888405.1| (PREDICTED: uncharacterized protein LOC107423372 [Ziziphus jujuba])

HSP 1 Score: 206.5 bits (524), Expect = 3.4e-50
Identity = 107/163 (65.64%), Postives = 124/163 (76.07%), Query Frame = 1 

Query: 3   SIPRRSFLPTRPL----NDALPVSQP------DSTQTLRRRLSSISFKIQPISS---PVT 62
           S  +RSFLPT P     N +LPVSQ       D  Q +RRRLSS+S KIQPISS   PV 
Sbjct: 7   SFQKRSFLPTMPTLTNPNGSLPVSQSKQDPSEDQNQGIRRRLSSLSLKIQPISSSSSPVA 66

Query: 63  SWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGS 122
           SW+F RSKSVSS+ ++ G S+RKWWDWGWSWILSRK  FA+DLEMN+EETK L S+ RGS
Sbjct: 67  SWAFRRSKSVSSMGEYAGSSIRKWWDWGWSWILSRKPIFAQDLEMNEEETKLLGSHNRGS 126

Query: 123 FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK 153
           +RH+FYKVRSE RK +RSDRV LPQT +Y+S NYSKNFDDG K
Sbjct: 127 WRHVFYKVRSELRKFVRSDRVDLPQTCRYESFNYSKNFDDGRK 169

[Close]
BLAST of Cp4.1LG04g04340 vs. NCBI nr
Match: gi|590688942|ref|XP_007043088.1| (Uncharacterized protein TCM_007583 [Theobroma cacao])

HSP 1 Score: 196.4 bits (498), Expect = 3.5e-47
Identity = 91/138 (65.94%), Postives = 117/138 (84.78%), Query Frame = 1 

Query: 18  ALPVSQPDSTQTL---RRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWW 77
           ALPVSQ +S + L   RRRLSS+S  I+PISSP TSW+FHRSKS+SS+ ++ G S+RKWW
Sbjct: 13  ALPVSQTESKEQLPGLRRRLSSVSLNIKPISSPATSWAFHRSKSLSSMGEYAGGSIRKWW 72

Query: 78  DWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQ 137
           DWGWSW+LSRK  FA+DLEMN+EET+ L  + +GS+RH+FYKVRSE +KL+ SD+VGLPQ
Sbjct: 73  DWGWSWVLSRKPMFAKDLEMNEEETRILGCHNKGSWRHVFYKVRSEVKKLVGSDKVGLPQ 132

Query: 138 TFKYDSVNYSKNFDDGVK 153
           T++Y+S++YSKNFDDG K
Sbjct: 133 TYRYNSLDYSKNFDDGQK 150

[Close]
BLAST of Cp4.1LG04g04340 vs. NCBI nr
Match: gi|720032935|ref|XP_010266269.1| (PREDICTED: uncharacterized protein LOC104603812 [Nelumbo nucifera])

HSP 1 Score: 194.1 bits (492), Expect = 1.8e-46
Identity = 92/147 (62.59%), Postives = 114/147 (77.55%), Query Frame = 1 

Query: 6   RRSFLPTRPLNDALPVSQPDSTQT--LRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLR 65
           +RSF P    N +LPVSQ   T    LRRRLSSIS +I PIS+P TSW+F RSKS+S++ 
Sbjct: 11  KRSFFPCLHTNQSLPVSQAAGTNEHGLRRRLSSISLRIPPISTPATSWTFPRSKSMSAIG 70

Query: 66  DHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGSFRHLFYKVRSEFRK 125
           +  G S+RKWWDWGW WILSRK  FA+D+EMN+EET  L  + +GS+RH+FYKVRSEFR+
Sbjct: 71  ESAGNSIRKWWDWGWGWILSRKPVFAKDMEMNEEETAILGCHSKGSWRHVFYKVRSEFRR 130

Query: 126 LIRSDRVGLPQTFKYDSVNYSKNFDDG 151
           L+  D VGLPQT++YDS +YSKNFDDG
Sbjct: 131 LVGYDNVGLPQTYRYDSYSYSKNFDDG 157

[Close]
BLAST of Cp4.1LG04g04340 vs. NCBI nr
Match: gi|703077883|ref|XP_010090708.1| (hypothetical protein L484_013730 [Morus notabilis])

HSP 1 Score: 193.4 bits (490), Expect = 3.0e-46
Identity = 98/152 (64.47%), Postives = 116/152 (76.32%), Query Frame = 1 

Query: 8   SFLPTRPLNDALPVSQP-----DSTQTLRRRLSSISFKIQPISS-PVTSWSFHRSKSVSS 67
           S + T    D LPVSQ      D   ++RRRLSS+S K+QPISS P  SW+F RSKSVS+
Sbjct: 3   SIVQTFQKRDFLPVSQDASSPKDQQPSIRRRLSSLSLKLQPISSSPAASWAFRRSKSVSA 62

Query: 68  LRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGSFRHLFYKVRSEF 127
           + +  G S+RKWWD GW WILSRK  FA DLEMN+EETK+L S+ RGS+RH+FYKVRSE 
Sbjct: 63  MGESAGSSIRKWWDCGWGWILSRKPMFAEDLEMNEEETKALGSHSRGSWRHVFYKVRSEL 122

Query: 128 RKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS 154
           RKL+RSDRVGLPQT +YDS NYSKNFDDG K+
Sbjct: 123 RKLVRSDRVGLPQTCRYDSFNYSKNFDDGRKT 154

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g04340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG04g04340 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K1L8_CUCSA4.2e-6381.60Uncharacterized protein OS=Cucumis sativus GN=Csa_7G027010 PE=4 SV=1[more]
A0A061E1J1_THECC2.5e-4765.94Uncharacterized protein OS=Theobroma cacao GN=TCM_007583 PE=4 SV=1[more]
W9QTX6_9ROSA2.1e-4664.47Uncharacterized protein OS=Morus notabilis GN=L484_013730 PE=4 SV=1[more]
A0A0D2SLE5_GOSRA1.0e-4561.11Uncharacterized protein OS=Gossypium raimondii GN=B456_005G216400 PE=4 SV=1[more]
A0A067LHY9_JATCU8.8e-4563.83Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10745 PE=4 SV=1[more]
BLAST of Cp4.1LG04g04340 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35320.12.6e-2445.38 unknown protein[more]
AT2G17300.11.3e-2044.80 unknown protein[more]
BLAST of Cp4.1LG04g04340 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188125|gb|KGN43358.1|6.0e-6381.60hypothetical protein Csa_7G027010 [Cucumis sativus][more]
gi|1009141847|ref|XP_015888405.1|3.4e-5065.64PREDICTED: uncharacterized protein LOC107423372 [Ziziphus jujuba][more]
gi|590688942|ref|XP_007043088.1|3.5e-4765.94Uncharacterized protein TCM_007583 [Theobroma cacao][more]
gi|720032935|ref|XP_010266269.1|1.8e-4662.59PREDICTED: uncharacterized protein LOC104603812 [Nelumbo nucifera][more]
gi|703077883|ref|XP_010090708.1|3.0e-4664.47hypothetical protein L484_013730 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0035235 ionotropic glutamate receptor signaling pathway
biological_process GO:0006811 ion transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0004970 ionotropic glutamate receptor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g04340.1Cp4.1LG04g04340.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35714FAMILY NOT NAMEDcoord: 1..152
score: 2.0
NoneNo IPR availablePANTHERPTHR35714:SF1SUBFAMILY NOT NAMEDcoord: 1..152
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g04340Cucsa.099820Cucumber (Gy14) v1cgycpeB0208
Cp4.1LG04g04340CmaCh20G007100Cucurbita maxima (Rimu)cmacpeB575
Cp4.1LG04g04340CmaCh02G003030Cucurbita maxima (Rimu)cmacpeB641
Cp4.1LG04g04340CmaCh11G013250Cucurbita maxima (Rimu)cmacpeB154
Cp4.1LG04g04340CmoCh20G007050Cucurbita moschata (Rifu)cmocpeB525
Cp4.1LG04g04340CmoCh11G017950Cucurbita moschata (Rifu)cmocpeB126
Cp4.1LG04g04340Cla015733Watermelon (97103) v1cpewmB674
Cp4.1LG04g04340Csa6G117780Cucumber (Chinese Long) v2cpecuB689
Cp4.1LG04g04340MELO3C015705Melon (DHL92) v3.5.1cpemeB612
Cp4.1LG04g04340MELO3C013487Melon (DHL92) v3.5.1cpemeB601
Cp4.1LG04g04340ClCG02G003320Watermelon (Charleston Gray)cpewcgB597
Cp4.1LG04g04340Lsi11G012990Bottle gourd (USVL1VR-Ls)cpelsiB526
Cp4.1LG04g04340Lsi10G000050Bottle gourd (USVL1VR-Ls)cpelsiB520
Cp4.1LG04g04340MELO3C015705.2Melon (DHL92) v3.6.1cpemedB724
Cp4.1LG04g04340CsaV3_7G002020Cucumber (Chinese Long) v3cpecucB0863
Cp4.1LG04g04340Bhi05G001346Wax gourdcpewgoB0851
Cp4.1LG04g04340CsGy7G001880Cucumber (Gy14) v2cgybcpeB964
Cp4.1LG04g04340CsGy6G009690Cucumber (Gy14) v2cgybcpeB844
Cp4.1LG04g04340Carg16130Silver-seed gourdcarcpeB0487
Cp4.1LG04g04340Carg18108Silver-seed gourdcarcpeB1483
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g04340Silver-seed gourdcarcpeB0288
Cp4.1LG04g04340Silver-seed gourdcarcpeB1193
Cp4.1LG04g04340Cucurbita pepo (Zucchini)cpecpeB267
Cp4.1LG04g04340Cucurbita pepo (Zucchini)cpecpeB304
Cp4.1LG04g04340Cucurbita pepo (Zucchini)cpecpeB495
Cp4.1LG04g04340Cucumber (Gy14) v1cgycpeB0298
Cp4.1LG04g04340Cucurbita maxima (Rimu)cmacpeB497
Cp4.1LG04g04340Cucurbita maxima (Rimu)cmacpeB537
Cp4.1LG04g04340Cucurbita moschata (Rifu)cmocpeB456
Cp4.1LG04g04340Cucurbita moschata (Rifu)cmocpeB492
Cp4.1LG04g04340Wild cucumber (PI 183967)cpecpiB692
Cp4.1LG04g04340Cucumber (Chinese Long) v2cpecuB690