Cp4.1LG04g03840 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g03840
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTranscription initiation factor TFIID subunit-like protein
LocationCp4.1LG04 : 6924668 .. 6931531 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGTTACCCGTTTCATCCGGGTTCGCTTAGTTCTACATTATGTACCTGCCGTTTCTACTGGATCCATTCTGCGGGATTTTCCTCTTATAAATTGCTAAAGCTTCAAACTTCCTGCTCCTCCGCTTGCTCCCCACTCATCATCGTTACCGTAAGCTCTTCGCTCTTTGAAATTTTGCTGCTTGTTGCTTGTTGATTGTTGATTCAATTTCAATAGCGTAGTTTTGTTTGTCGGCAGTGGAATTTTCGGGGAAGTATAGGGAATTTCTTCATTTTTACAATTAGTATTTTGTTGGGTCTTTGCAAATTTGCCCACTAGGAGCTTTTTTGGTCAAGCTTAGACCTAAGCTTGAGAGGGTCTTTCCCCCTTCTTCTTCTATGAATCTTGTGCATTTTTACGGAGGTTTTTGTTAATTGGCGATTTACATTGTAGGACGTATGTACTTACTTGGGGCGCTCAGTACATGAGATTTTGAAGCAAGAAAATGAGTATAGTTCCTAAAGAAAACGTTGAGGTCATTGCGCAATGTATAGGGATCAATAACTTGTCCCCAGATGTCGCATTGGCAGTTGCTCCTGATGTGGAGTATCGTTTGCGGGAGATCATGCAGGTAATTTTCTTGTTTACGGAATGGATGTTGGCATTCATGCTAGATAATGTGCAGCTAAACTGAATGAGGGGTCACACATCTTTGTTCTAGTGGTTCTAAATTATGATACCTAAAAGTCTGTAAATATAATGTGATTTGTAGAATATGAAATGATGGATGAGCTAAATCTTTCTCTTACTCCAATTTTAGGAGGCCATCAAATGTATGCGTCACTCCAAGAGAACTACGTTGACAGCCGATGATGTTGATGGTGCACTAAACCTGAGAAATGTGGAGGTAAATACAATGAGTTTTAAACGTTGATGATCTTGATTTAGGGTGATCTAATAGACTGTAGTTGCCATTCTTTGATTGATGCACCATTTAAGGAAGCCATAAGTTTTGTTATGTAAAAGGATTTAAATTGGGACCATCTGAATTTTTCTTACCACTTCCTGTGTCTTTGATGCCTACTGCATCGTATTGACATTGGCAATCAAAATAATTGGATCACTTGAAATATCCATGAATTGATGATGGAAGACTTTCCACTTAATTGAATAAGGGAAGGGGAGAGGGAACCGAAGTTTAGCAAGTTTTCGGCTATAAGCTGCTACCGTCGAGCTTTCTTTGCCAGCTTCCTTTCATTCGCTTCGCGGGAGTCGCACAACACATCACTGGAAGTCAGAGGACTCATACTACCTGCCTAACCCCTTGTTAATCACTCCATTCATCCAAAAGAGATTGGGCGTATGTATTTACATGACGCCTGTAGATTTGACTATACCTACACTCGGAGCCAATCCCCTATTGATCCTGCCACCACGCCGGAGCTCGTGTGGAATCTTTTCATTCTGGCGTAACTGCGGTGAAACATAACAAAATCTTACAGTCGCGTAATAGAAGGGCGATTAAAAAAAAATCTCCTTTAACGTACCCTTTTTCCTTTTTTCAATTTGTAATAAAAGGAACATTATTCACTCTTCCTTTTTGATGTTGATGTGGCAGCCAATGTATGGCTTTGCTTCTGGAGGCCCCTTGAGATTTAAAAGAGCTATTGGACATAGGGATCTGTTTTACCTTGAGGACAAGGACCTGGAATTTAAAGATGTAAGTAATTTTTTCACCATTCTAGCTGGTCCATTCTGGTCAACGTCTTTAAATGAATGTGAACGTGTGTTCTACTCATAGGTCATTGATGCCCCATTGCCAAAAGCTCCTCTTGATACTGCAGTTTTTTGCCACTGGCTAGCGATTGAAGGTGTACAGCCTGCAATACCAGAAAATGCTCCTGTAGAAGGTTTGTATAAAATCTGACTAAAATGTGATTGTTGTTACTCCCAGGTCTGGCAGATAGTTTTATTTGGATACCCAAAATTTAAACAACTGAAATTTTGATAGCAGCCATTTACATGGTAGCATGTAGAAGATATTTCTGTGTTCGTTGGTTTTGAAAAAAAAAAAAAAATTTCAGCAAGAGTTCAAGGGCCGAAAACCAACTACAGTTAATAAAACAAAGTCTTTTTCCATTGTTGGTTATGGAGGAGTTTGCTTATGATCGAAGGGTCGTATGGTTAAATTTATTTTAATATTTCCAATAGGAAGATAGAATTGGATGTACTTTTATTCTTTATTCTTTCATTTACTCTTTCCCTTTTTCCCTAGTTGCATAGTTGCAGTAGTGTTAGGAACCACGACTCTCTCCACAATGACATGATATTGTCCACTTTGAGCATAAGCTCTCACGACTTTGTTTTGGGCTTTCCCAAAAGGCCTCATTTATAAACCCATCATCATTCCTTAAATTAGCCAATGTGAGACTCTCTCCTGACCATCCTCAACAAGTAGTCTAAGTTATTTAACAACGTGTATATTGTCCTTCCTATCTACAGTAATTTTACCACCTTCTGATGTCAAAATTAATGAACAAAAGGAGGGGCTTCCTGTTGACATTAAATTACCAGTTAAGCATATACTGTCCAAGGAGCTTCAGGTAATTGACTTGTTATTTGCTTATATTGTTCTGTTAAAGTTTAATCGGTTGCTAACTTACATGTTTTCATTACATTATTTGCAGCTATATTTTGACAAAATCACGGAGCTTGTTGTTAGTAGGTCTAATTCAGTTCTTTTTAAGAAGGCATTAGTGAGTTTATCTACGGACTCAGGACTTCACCCATTGGTTCCTTATTTTACATGCTTTATAGCTGATGAGGTATGAATGTTTGAGCATACAAGATCTGCAGATTCCATTAGAAGTTCTTATGAATTTTTATTTAGAATTCTTTGTTCTTGATTCTCCAACGATATCAGGTTGCACGTGGACTGGGTGATTATTCCCTTCTTTTTGCTTTAATGCGTGTTGTTTGGAGTCTTCTTCAGAATCCTCACATCCACATTGAACCTTATGTGAGTTGAATTCAATGTATCTGTTAAGTCATCTTTTTTCTCTAAAGGTTGAGTTGAGGCTCACGAATGTCTAGGTTAGCGGTATTTTGACTACTCATTGATGTTCATAGCAGCCAGGTTACAATCATCATCCTGGCCTGCTTTATCTTCCATGATTCTCATAATTCTTCAACTTGTTCAAAGGATATTTAGTTAGCATTCTATTCTTACATAGTGAGTCAGCCATGTTTTGAGGCAACTATAAGGATAATATTTATGGGTTTGCTTGGTGCTGTCTGTGGAAGGTGTTAATCTGTCTCTGAGACAGGTGTCTTTTCTTGTCAGCTACACCAAATGATGCCATCTGTTGTGACCTGCCTCGTCGCAAAAAGGTTAGGGAATAGGCTTTCAGACAACCACTGGGAACTTAGAGACTTCACAGCAAAAGTGGTTGCTCTAATCTGTAAAAGGTGATTGATTTTGCCAGATCTACTTAGTCAAATGCTTATCAATTTTGAGTATGGCCATACACAATTAGGGCTTGGCTTTTTGCAGGGTTTTGGAAGTGCATGTCTTGTATGGCCTATCAACATGATTTGATTATATATTCTATTCGTTTGCTTTTTATCAATCACTTGTAGTATTTGCATTTCTTCATTTCAACCTCCTTTTTGAATTAAATAGTTCAGGCGTATGTAGAAAGCATATCAAACTGGATTTGGTATTTATAAATTTTACTTTACATCGCTATGGAGACAATAGGTTACTTTAATATTATGTTTTCACTAAACCTGCTTGGGAGGTCGTTCTCCTCCATCCTCTTAGGATAAGGGGCATATTATGAGATTCCACATTGTTTGGAGAGGAGAACGAAACATTCCTTATAAGAGTGAAAATCTCTCCCTAGCAGACGCATTTTAAAATCTTGAGGGGAAGCCCAGAAGGGAAAACCCAAAGAGGAGAATATCTGCTAGCGGTGACTTGGGCTGTTACAAATTGTATCAGAGCCGCACATCGGCAGTAAACCAGCGAGGACGCTGTTCCCCAAGGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGAAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAACCTTGAAAGGAATCCCATAAGAGAAAGCCTAAAGATAACAACATCTGCTAGCTGTGGGCTTGAGGGCTTGAGCTGTTATTCATATATTGTGACAGTATTCGTATTCTTTCCTTGTTGTTTGGGGATGTGGTTAGAGAGGAGTTGAGAAATCTCAATTTCTTGTTAGATTTATGCATCTCTTTGAGAATCCATTATGACTCTTTGAAATTATCCTTTAGGCCGTGTTTTTTTTAGGATTGGACCCCTTTTCTGAATAGTTAGTTCTGGATGTGGTCGTTCCCTTTTGTTGGGCTGTTTTCTTTATGCCCTTCTGTGTTCTTTCATTTTATTCTCAATGGAAGCATGTTCTGAATAAAAATCAACCTATTAGGCTAAAACAAATGTTTAGACCATGGTACAATTCTTTGTCGTCTGCCATTTTCCTTCCCAAGGCGTCTTGCTTTTGGATCTTTTCTGTAAGATTGCAGTTCCAATGTTGCAGGTTCGGTCATGTTTACAACACCCTGCAGACAAAGCTCACAAAAACTCTTCTCAATGCATTTTTAGACCCAAAACGGTCTCTGACTCAACATTATGGTGCAGTTCAAGGCTTAGCAGCCTTGGGGATGAATGTGGTACGCTCTTCTCATACGCTTCATTAATTAGACTATGGGGTTGAAGGTTGGAGAAAGATGCAAAAAAGAAAATGACTTAATGGAAAGAAACCTAACGTGTTTGTCTCGAAAGTATGCAAAGCCATACCATGGGAGAAGGGAAGAGATTTAGGGAAATATTTGCCTCTGTATGCGATTTGAGATTTAAAACATACCAAGTCATGTTGAACTTTAAACAATGCGTCGGAACGACATGTTGATTTCATCTAATTTGAATTTGCACATTCATGCATTTCATCCTTGATTTAGAGGGTATTCCTTTAACGATGTCCCTCGTGATTTTCTTTTTCTCCTCGTTCCCAGCTGATTATTTGCATATCTCTCATTTGTAATTTCATTAGAAGTAGAAAACTCCAATGGTCTTTTGACTTCTTAGTTATTTATGATTGGTATATTTCAGTAATTCATGCACAGATATCAGTTTATAATAGTGATATTCTATATAGGTTCACCTCCTTGTACTACCAAATCTTGAGCCATATCTGAGATTTTTGGAACCTGAGATGCTTCTTGCTAGTCAAAAGAATGAGATGAAACGGCATGAAGCTTGGCGTGTTTATGGAGCCTTGCTAGTGAGTTTTCATGCAACTTTCTCAGTTTCTTACCAGAATGTTCTGTAGAAACTGATGCAATCTTATAATGACATAATACATTTTTCAGCGAGCGGTCGGTCAATACATATATGATCGTGTCAAGATTTTTCCTCCTCTGCCTAGCACGCTTGCAGGTTCTGTCCTTCGGACGAATGCAAAAGTTATCACCACAGCATTCTCAAGTACGTTCTTTGCAACTTTCTTTGAATTGAACTACTGAGATACAAAAAAAACCATCAACTTCAGTCTTTTTTTTCTCTAAGCTAGAAATTTTTGTTCCTAGAATGACTTAATGTAAATATTTGATACATCCTAAGTTTTGGAGTATTTTAGTTCTCGATGAAGTTCACGTGCTAAAATTCATCTATTTTCGACATGTGTAATGTTAGACAAGCGCAAGTCGAATGCAGACCACTTAGAAGGGCAGCCTCCCCTCAAGAAGATGGTAATCGATGGCCCGATGGGTGTCACGCCAACTAATTCATCAGCATCATACATGGAAGGAACAGTCATTCCAGCTGCCTCTGGCAATTCCAATCTGATTTCGCCTACATCTTCTCGACCGATGCAAGACGAAACGATTTCAGGCAGCACTAGTAGTAAGGGCAAGCGTGACGATCAAATTCTTAAAAGGTCAGCTGTCCTATCTCAAGTCTGGAAAGAGGATCTTAATTCTGGAAAGTTGTTAACATCTATGTTAGATTTGTTTGGTGAAAGTATGTTCTGCTTCATTCCATCTCCTGAATTGTCCCTGTTCTTGTAGTAACTATCATCTATTTGCGAGTAGAAAATACGGTTCGTGTTGCGGTAGAATTACGTGTAAGCTAACGGCTATATATATATATACGTTTTTCGGAATCTAGAGGAAATTTTTATGCATTGACATTCATTTGCTGAAAAAGAATTAATACAGTTCTTATGCATAAGAGCAATCAGAATGCTCAAGTTGTCATTATAGCAACTTCTCTCTCAACAGCCTTCATCAAGAAGCTGCCCTCTTCTAGCACCATTTGAACAGGTAAAGCTCCAATCCCATTAGCCATAGCTAGCATCATCCTTTTGTTCTCAGCCTTAAACTCATCCAGATCAACCGTTCCACTCGAGTTACGATCAAACTGCAAAAACATAGAACTATAGACAGAAGAAAGCTCATCTGGATCAGGCTTCACGTCGATTCCAAAATCGGCCTCGATGACCCTGAGGCTCTGCAACTCCTTCAACATCTCACTATAGGAAAGGAGACCGTCATGATTCGTGTCGAGGTGAGCAAACCGGTCTCCTATGCAGGCACCAAAGGCTGCCTCATCTTCGACGAAGTTGACAATGGTGGCACTGTCCAATATCTCCACACTCATTTCTGATCTTTAGCTGAAGAACAGAGGAGATAGGAGGAAGGTAATGGGGAATGATCTTGAATTGGGTCAGGTTATCATATAAATAATCTCTCTTGGAACCTGCATCGCTGTGGCCATTTGTTTTTTATTTCAGTATTTTTTGA

mRNA sequence

GGGTTACCCGTTTCATCCGGGTTCGCTTAGTTCTACATTATGTACCTGCCGTTTCTACTGGATCCATTCTGCGGGATTTTCCTCTTATAAATTGCTAAAGCTTCAAACTTCCTGCTCCTCCGCTTGCTCCCCACTCATCATCGTTACCGACGTATGTACTTACTTGGGGCGCTCAGTACATGAGATTTTGAAGCAAGAAAATGAGTATAGTTCCTAAAGAAAACGTTGAGGTCATTGCGCAATGTATAGGGATCAATAACTTGTCCCCAGATGTCGCATTGGCAGTTGCTCCTGATGTGGAGTATCGTTTGCGGGAGATCATGCAGGAGGCCATCAAATGTATGCGTCACTCCAAGAGAACTACGTTGACAGCCGATGATGTTGATGGTGCACTAAACCTGAGAAATGTGGAGCCAATGTATGGCTTTGCTTCTGGAGGCCCCTTGAGATTTAAAAGAGCTATTGGACATAGGGATCTGTTTTACCTTGAGGACAAGGACCTGGAATTTAAAGATGTCATTGATGCCCCATTGCCAAAAGCTCCTCTTGATACTGCAGTTTTTTGCCACTGGCTAGCGATTGAAGGTGTACAGCCTGCAATACCAGAAAATGCTCCTGTAGAAGTAATTTTACCACCTTCTGATGTCAAAATTAATGAACAAAAGGAGGGGCTTCCTGTTGACATTAAATTACCAGTTAAGCATATACTGTCCAAGGAGCTTCAGCTATATTTTGACAAAATCACGGAGCTTGTTGTTAGTAGGTCTAATTCAGTTCTTTTTAAGAAGGCATTAGTGAGTTTATCTACGGACTCAGGACTTCACCCATTGGTTCCTTATTTTACATGCTTTATAGCTGATGAGGTTGCACGTGGACTGGGTGATTATTCCCTTCTTTTTGCTTTAATGCGTGTTGTTTGGAGTCTTCTTCAGAATCCTCACATCCACATTGAACCTTATCTACACCAAATGATGCCATCTGTTGTGACCTGCCTCGTCGCAAAAAGGTTAGGGAATAGGCTTTCAGACAACCACTGGGAACTTAGAGACTTCACAGCAAAAGTGGTTGCTCTAATCTGTAAAAGGTTCGGTCATGTTTACAACACCCTGCAGACAAAGCTCACAAAAACTCTTCTCAATGCATTTTTAGACCCAAAACGGTCTCTGACTCAACATTATGGTGCAGTTCAAGGCTTAGCAGCCTTGGGGATGAATGTGGTTCACCTCCTTGTACTACCAAATCTTGAGCCATATCTGAGATTTTTGGAACCTGAGATGCTTCTTGCTAGTCAAAAGAATGAGATGAAACGGCATGAAGCTTGGCGTGTTTATGGAGCCTTGCTACGAGCGGTCGGTCAATACATATATGATCGTGTCAAGATTTTTCCTCCTCTGCCTAGCACGCTTGCAGGTTCTGTCCTTCGGACGAATGCAAAAGTTATCACCACAGCATTCTCAAACAAGCGCAAGTCGAATGCAGACCACTTAGAAGGGCAGCCTCCCCTCAAGAAGATGGTAATCGATGGCCCGATGGGTGTCACGCCAACTAATTCATCAGCATCATACATGGAAGGAACAGTCATTCCAGCTGCCTCTGGCAATTCCAATCTGATTTCGCCTACATCTTCTCGACCGATGCAAGACGAAACGATTTCAGGCAGCACTAGTAGTAAGGGCAAGCGTGACGATCAAATTCTTAAAAGGTCAGCTGTCCTATCTCAAGTCTGGAAAGAGGATCTTAATTCTGGAAAGTTGTTAACATCTATGTTAGATTTGTTTGGTGAAAGTATGTTCTGCTTCATTCCATCTCCTGAATTGTCCCTGTTCTTGTAGTAACTATCATCTATTTGCGAGTAGAAAATACGGTTCGTGTTGCGGTAGAATTACGTGTAAGCTAACGGCTATATATATATATACGTTTTTCGGAATCTAGAGGAAATTTTTATGCATTGACATTCATTTGCTGAAAAAGAATTAATACAGTTCTTATGCATAAGAGCAATCAGAATGCTCAAGTTGTCATTATAGCAACTTCTCTCTCAACAGCCTTCATCAAGAAGCTGCCCTCTTCTAGCACCATTTGAACAGGTAAAGCTCCAATCCCATTAGCCATAGCTAGCATCATCCTTTTGTTCTCAGCCTTAAACTCATCCAGATCAACCGTTCCACTCGAGTTACGATCAAACTGCAAAAACATAGAACTATAGACAGAAGAAAGCTCATCTGGATCAGGCTTCACGTCGATTCCAAAATCGGCCTCGATGACCCTGAGGCTCTGCAACTCCTTCAACATCTCACTATAGGAAAGGAGACCGTCATGATTCGTGTCGAGGTGAGCAAACCGGTCTCCTATGCAGGCACCAAAGGCTGCCTCATCTTCGACGAAGTTGACAATGGTGGCACTGTCCAATATCTCCACACTCATTTCTGATCTTTAGCTGAAGAACAGAGGAGATAGGAGGAAGGTAATGGGGAATGATCTTGAATTGGGTCAGGTTATCATATAAATAATCTCTCTTGGAACCTGCATCGCTGTGGCCATTTGTTTTTTATTTCAGTATTTTTTGA

Coding sequence (CDS)

ATGAGTATAGTTCCTAAAGAAAACGTTGAGGTCATTGCGCAATGTATAGGGATCAATAACTTGTCCCCAGATGTCGCATTGGCAGTTGCTCCTGATGTGGAGTATCGTTTGCGGGAGATCATGCAGGAGGCCATCAAATGTATGCGTCACTCCAAGAGAACTACGTTGACAGCCGATGATGTTGATGGTGCACTAAACCTGAGAAATGTGGAGCCAATGTATGGCTTTGCTTCTGGAGGCCCCTTGAGATTTAAAAGAGCTATTGGACATAGGGATCTGTTTTACCTTGAGGACAAGGACCTGGAATTTAAAGATGTCATTGATGCCCCATTGCCAAAAGCTCCTCTTGATACTGCAGTTTTTTGCCACTGGCTAGCGATTGAAGGTGTACAGCCTGCAATACCAGAAAATGCTCCTGTAGAAGTAATTTTACCACCTTCTGATGTCAAAATTAATGAACAAAAGGAGGGGCTTCCTGTTGACATTAAATTACCAGTTAAGCATATACTGTCCAAGGAGCTTCAGCTATATTTTGACAAAATCACGGAGCTTGTTGTTAGTAGGTCTAATTCAGTTCTTTTTAAGAAGGCATTAGTGAGTTTATCTACGGACTCAGGACTTCACCCATTGGTTCCTTATTTTACATGCTTTATAGCTGATGAGGTTGCACGTGGACTGGGTGATTATTCCCTTCTTTTTGCTTTAATGCGTGTTGTTTGGAGTCTTCTTCAGAATCCTCACATCCACATTGAACCTTATCTACACCAAATGATGCCATCTGTTGTGACCTGCCTCGTCGCAAAAAGGTTAGGGAATAGGCTTTCAGACAACCACTGGGAACTTAGAGACTTCACAGCAAAAGTGGTTGCTCTAATCTGTAAAAGGTTCGGTCATGTTTACAACACCCTGCAGACAAAGCTCACAAAAACTCTTCTCAATGCATTTTTAGACCCAAAACGGTCTCTGACTCAACATTATGGTGCAGTTCAAGGCTTAGCAGCCTTGGGGATGAATGTGGTTCACCTCCTTGTACTACCAAATCTTGAGCCATATCTGAGATTTTTGGAACCTGAGATGCTTCTTGCTAGTCAAAAGAATGAGATGAAACGGCATGAAGCTTGGCGTGTTTATGGAGCCTTGCTACGAGCGGTCGGTCAATACATATATGATCGTGTCAAGATTTTTCCTCCTCTGCCTAGCACGCTTGCAGGTTCTGTCCTTCGGACGAATGCAAAAGTTATCACCACAGCATTCTCAAACAAGCGCAAGTCGAATGCAGACCACTTAGAAGGGCAGCCTCCCCTCAAGAAGATGGTAATCGATGGCCCGATGGGTGTCACGCCAACTAATTCATCAGCATCATACATGGAAGGAACAGTCATTCCAGCTGCCTCTGGCAATTCCAATCTGATTTCGCCTACATCTTCTCGACCGATGCAAGACGAAACGATTTCAGGCAGCACTAGTAGTAAGGGCAAGCGTGACGATCAAATTCTTAAAAGGTCAGCTGTCCTATCTCAAGTCTGGAAAGAGGATCTTAATTCTGGAAAGTTGTTAACATCTATGTTAGATTTGTTTGGTGAAAGTATGTTCTGCTTCATTCCATCTCCTGAATTGTCCCTGTTCTTGTAG

Protein sequence

MSIVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADDVDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDVIDAPLPKAPLDTAVFCHWLAIEGVQPAIPENAPVEVILPPSDVKINEQKEGLPVDIKLPVKHILSKELQLYFDKITELVVSRSNSVLFKKALVSLSTDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVWSLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRLSDNHWELRDFTAKVVALICKRFGHVYNTLQTKLTKTLLNAFLDPKRSLTQHYGAVQGLAALGMNVVHLLVLPNLEPYLRFLEPEMLLASQKNEMKRHEAWRVYGALLRAVGQYIYDRVKIFPPLPSTLAGSVLRTNAKVITTAFSNKRKSNADHLEGQPPLKKMVIDGPMGVTPTNSSASYMEGTVIPAASGNSNLISPTSSRPMQDETISGSTSSKGKRDDQILKRSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIPSPELSLFL
Homology
[Close]
BLAST of Cp4.1LG04g03840 vs. Swiss-Prot
Match: TAF6_ARATH (Transcription initiation factor TFIID subunit 6 OS=Arabidopsis thaliana GN=TAF6 PE=1 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 3.6e-195
Identity = 347/549 (63.21%), Postives = 428/549 (77.96%), Query Frame = 1 

Query: 1   MSIVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD 60
           MSIVPKE VEVIAQ IGI NL P+ AL +APDVEYR+REIMQEAIKCMRHSKRTTLTA D
Sbjct: 1   MSIVPKETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASD 60

Query: 61  VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDVIDAPLPKAPLDTAV 120
           VDGALNLRNVEP+YGFASGGP RF++AIGHRDLFY +D++++FKDVI+APLPKAPLDT +
Sbjct: 61  VDGALNLRNVEPIYGFASGGPFRFRKAIGHRDLFYTDDREVDFKDVIEAPLPKAPLDTEI 120

Query: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDVKINEQKEGLPVDIKLPVKHILSKELQLYFDK 180
            CHWLAIEGVQPAIPENAP+EVI  P++ KI+EQK+G  +D++LPVKH+LS+ELQLYF K
Sbjct: 121 VCHWLAIEGVQPAIPENAPLEVIRAPAETKIHEQKDGPLIDVRLPVKHVLSRELQLYFQK 180

Query: 181 ITELVVSRSNSVLFKKALVSLSTDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW 240
           I EL +S+SN  L+K+ALVSL++DSGLHPLVPYFT FIADEV+ GL D+ LLF LM +V 
Sbjct: 181 IAELAMSKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGLNDFRLLFNLMHIVR 240

Query: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRLSDNHWELRDFTAKVVALICKRFGHVY 300
           SLLQNPHIHIEPYLHQ+MPSVVTCLV+++LGNR +DNHWELRDF A +V+LICKR+G VY
Sbjct: 241 SLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDFAANLVSLICKRYGTVY 300

Query: 301 NTLQTKLTKTLLNAFLDPKRSLTQHYGAVQGLAALGMNVVHLLVLPNLEPYLRFLEPEML 360
            TLQ++LT+TL+NA LDPK++LTQHYGA+QGLAALG  VV LL+L NLEPYL  LEPE+ 
Sbjct: 301 ITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSNLEPYLSLLEPELN 360

Query: 361 LASQKNEMKRHEAWRVYGALLRAVGQYIYDRVKIFPPLPSTLAGSVLRTNAK-VITTAFS 420
              QKN+MK +EAWRVYGALLRA G  I+ R+KIFPPLPS     + +   K  I +   
Sbjct: 361 AEKQKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPLPSPSPSFLHKGKGKGKIISTDP 420

Query: 421 NKRKSNADHLEGQPPLKKMV-IDGPMGVTPTNSSASYMEGTVIPAASGN--SNLISPTSS 480
           +KRK + D  E Q P K+++ +DGP GV   + S S       P  + N   N + P+SS
Sbjct: 421 HKRKLSVDSSENQSPQKRLITMDGPDGVHSQDQSGSAPMQVDNPVENDNPPQNSVQPSSS 480

Query: 481 RPMQDETISGSTSSKGKRD--DQILKRSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFI 540
               D   S S + K K     + +   A+L Q+WK+DL+SG+LL  + +L+G+ +  FI
Sbjct: 481 EQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRLLVKLHELYGDRILPFI 540

Query: 541 PSPELSLFL 544
           PS E+S+FL
Sbjct: 541 PSTEMSVFL 549

[Close]
BLAST of Cp4.1LG04g03840 vs. Swiss-Prot
Match: TAF6B_ARATH (Transcription initiation factor TFIID subunit 6b OS=Arabidopsis thaliana GN=TAF6B PE=1 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 2.5e-143
Identity = 276/564 (48.94%), Postives = 372/564 (65.96%), Query Frame = 1 

Query: 3   IVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQ-------------------- 62
           +V KE++EVIAQ IG++ LSPDV+ A+APDVEYR+RE+MQ                    
Sbjct: 1   MVTKESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQVYHQLQLYFCPLISSLTCRR 60

Query: 63  ---EAIKCMRHSKRTTLTADDVDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDK 122
              EAIKCMRH++RTTL A DVD AL+ RN+EP  G  S   +RFKRA  +RDL++ +DK
Sbjct: 61  NLQEAIKCMRHARRTTLMAHDVDSALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDK 120

Query: 123 DLEFKDVIDAPLPKAPLDTAVFCHWLAIEGVQPAIPENAPVEVILPPSDVKINEQKEGLP 182
           D+E K+VI+APLP AP D +VF HWLAI+G+QP+IP+N+P++ I   SD+K +E K    
Sbjct: 121 DVELKNVIEAPLPNAPPDASVFLHWLAIDGIQPSIPQNSPLQAI---SDLKRSEYK---- 180

Query: 183 VDIKLPVKHILSKELQLYFDKITELVVSRSNSVLFKKALVSLSTDSGLHPLVPYFTCFIA 242
            D  L  + +LSK+LQ+YFDK+TE  +++S S LF++AL SL  D GLHPLVP+FT FIA
Sbjct: 181 -DDGLAARQVLSKDLQIYFDKVTEWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIA 240

Query: 243 DEVARGLGDYSLLFALMRVVWSLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRLSDNHW 302
           +E+ + + +Y +L ALMR+  SLL NPH+HIEPYLHQ+MPS++TCL+AKRLG R SDNHW
Sbjct: 241 EEIVKNMDNYPILLALMRLARSLLHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHW 300

Query: 303 ELRDFTAKVVALICKRFGHVYNTLQTKLTKTLLNAFLDPKRSLTQHYGAVQGLAALGMNV 362
           +LR+FTA  VA  CKRFGHVY+ L  ++T++LL+ FLDP ++L QHYGA+QG+ ALG+N+
Sbjct: 301 DLRNFTASTVASTCKRFGHVYHNLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNM 360

Query: 363 VHLLVLPNLEPYLRFLEPEMLLASQKNEMKRHEAWRVYGALLRAVGQYIYDRVKIFPPLP 422
           V  LVLPNL PYL  L PEM L  QK E KRH AW VYGAL+ A G+ +Y+R+K    L 
Sbjct: 361 VRFLVLPNLGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLL 420

Query: 423 STLAGSVLRTNAKVITTAFSNKRKSNADHLEGQPPLKKMVIDGPMGVTPTNSSASYMEGT 482
           S    SV +TN K +T+   +KRK+++D+L  QPPLKK+ +    G+   +S+   M GT
Sbjct: 421 SPPTSSVWKTNGK-LTSPRQSKRKASSDNLTHQPPLKKIAVG---GIIQMSSTQMQMRGT 480

Query: 483 VIPAASGNSNLISPTSSRPMQDETISGSTSSKGKRDDQILKRSAVLSQVWKEDLNSGKLL 542
                  +++  +   + P    TI+  TS+    D                       L
Sbjct: 481 TTVPQQSHTDADARHHNSP---STIAPKTSAAAGTD-------------------VDNYL 527

Query: 543 TSMLDLFGESMFCFIPSPELSLFL 544
             + + FGESM  F P+ ELS FL
Sbjct: 541 FPLFEYFGESMLMFTPTHELSFFL 527

[Close]
BLAST of Cp4.1LG04g03840 vs. Swiss-Prot
Match: TAF6_SCHPO (Transcription initiation factor TFIID subunit 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=taf6 PE=1 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 6.6e-88
Identity = 172/419 (41.05%), Postives = 263/419 (62.77%), Query Frame = 1 

Query: 7   ENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADDVDGALN 66
           E+++ +A+ +GI NL+ + A A+A D+EYR+ +++QEA K M HSKRT LT+ D+  AL 
Sbjct: 9   ESIKDVAEMLGIGNLADEPAAAIAMDLEYRIHQVVQEATKFMVHSKRTVLTSADISSALR 68

Query: 67  LRNVEPMYGFASGGPLRFKRAI---GHRDLFYLEDKDLEFKDVIDAPLPKAPLDTAVFCH 126
             NVEP+YGF +  PL F  A    G   L+YL+D++++F+ +I+APLPK P + +   H
Sbjct: 69  TLNVEPLYGFNNSRPLEFHEAAVGAGQNSLYYLDDEEVDFEKIINAPLPKVPRNISYSAH 128

Query: 127 WLAIEGVQPAIPENAP-------------VEVILPPSDVKINEQKEGLP----VDIKLPV 186
           WLAIEGVQPAIP+N                  ++P +     E + G+     V+IK  V
Sbjct: 129 WLAIEGVQPAIPQNPTPSDHTVGEWASKGTSGVMPGASTAAKEARNGVTSMDNVEIKPLV 188

Query: 187 KHILSKELQLYFDKITELVVSRSNSVLFKKALVSLSTDSGLHPLVPYFTCFIADEVARGL 246
           +H+LSKELQLYF++IT  ++  +N  L   AL SL  D GLH L+PYF  F++D V R L
Sbjct: 189 RHVLSKELQLYFERITSALLDETNVELRDAALSSLRDDPGLHQLLPYFIMFLSDSVTRNL 248

Query: 247 GDYSLLFALMRVVWSLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRLSDN-HWELRDFT 306
           G+  +L  LM + W+LL NP++ +EPY+ Q+MPS++TCLVAKRLG+  +++ H+ LRD  
Sbjct: 249 GNLVVLTTLMHMAWALLDNPNLFVEPYVQQLMPSILTCLVAKRLGSDPNNHEHYALRDLA 308

Query: 307 AKVVALICKRFGHVYNTLQTKLTKTLLNAFLDPKRSLTQHYGAVQGLAALGMNVVHLLVL 366
           A ++ ++C RFG+VY TL+ ++T+T L AFLD  +  + HYGA++GL  +G   + +LV+
Sbjct: 309 AFLLGIVCDRFGNVYYTLKPRVTRTALKAFLDNTKPYSTHYGAIKGLKTMGKEAIRVLVV 368

Query: 367 PNLEPYLRFLEPEMLLASQKNEMKRHEAWRVYGALLRAVGQYIYDRVKIFPPLPSTLAG 405
           PN++ Y   +   +    + NE + +EA +   AL  A+     D++     LP   +G
Sbjct: 369 PNIKVYEVLVRKTL---EKGNEEEIYEANKCMDALYDALLLLRDDQLPNQRTLPPNASG 424

[Close]
BLAST of Cp4.1LG04g03840 vs. Swiss-Prot
Match: TAF6_XENLA (Transcription initiation factor TFIID subunit 6 OS=Xenopus laevis GN=taf6 PE=2 SV=3)

HSP 1 Score: 263.8 bits (673), Expect = 4.0e-69
Identity = 146/381 (38.32%), Postives = 229/381 (60.10%), Query Frame = 1 

Query: 2   SIVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADDV 61
           +++P E+++VI++ +GI+ +S +    +A +V +R++E+ Q+A+K M   KR  LT  D+
Sbjct: 10  TLLPSESMKVISESVGISQMSEETCQLLAQEVSFRIKEVTQDALKFMHVGKRQKLTPSDI 69

Query: 62  DGALNLRNVEPMYGFASGGPLRFKRAIGH-RDLFYLEDKDLEFKDVIDAPLPKAPLDTAV 121
           D AL L+NVEP+YGF     L F+ A G  R+L + E+K+ +  D+I  PLP+ PLD ++
Sbjct: 70  DAALKLKNVEPIYGFHPKEFLPFRYASGGGRELHFYEEKETDLSDIISTPLPRVPLDVSL 129

Query: 122 FCHWLAIEGVQPAIPENAP--------VEVILPPSDVKINEQK----------------- 181
             HWL+IEGVQPAIPEN P         E   P    K  +++                 
Sbjct: 130 KAHWLSIEGVQPAIPENPPPVPKEQQKTEATEPLKVAKPGQEEGLPGKGQGSGEGKGKEK 189

Query: 182 -----EGLPVDIKLPVKHILSKELQLYFDKITELVVSRSNSVLFKKALVSLSTDSGLHPL 241
                EG P+ +K    H LS E QLY+ +ITE  V  S      +AL S++TD GL+ +
Sbjct: 190 KTAILEGAPLKLKPRSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQSIATDPGLYQM 249

Query: 242 VPYFTCFIADEVARGL--GDYSLLFALMRVVWSLLQNPHIHIEPYLHQMMPSVVTCLVAK 301
           +P F+ FI++ V   +   + +LL  LMR+V +L+ NP +++E YLH+++P+V+TC+V++
Sbjct: 250 LPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVMTCIVSR 309

Query: 302 RLGNRLS-DNHWELRDFTAKVVALICKRFGHVYNTLQTKLTKTLLNAFLDPKRSLTQHYG 349
           +L  R   DNHW LRDF A+++A ICK F    N +Q+++TKT    ++D +   T  YG
Sbjct: 310 QLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITKTFTKTWVDDRTPWTTRYG 369

[Close]
BLAST of Cp4.1LG04g03840 vs. Swiss-Prot
Match: TAF6_HUMAN (Transcription initiation factor TFIID subunit 6 OS=Homo sapiens GN=TAF6 PE=1 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 6.8e-69
Identity = 145/387 (37.47%), Postives = 230/387 (59.43%), Query Frame = 1 

Query: 2   SIVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADDV 61
           +++P E+++V+A+ +GI  +  +    +  +V YR++EI Q+A+K M   KR  LT  D+
Sbjct: 12  TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71

Query: 62  DGALNLRNVEPMYGFASGGPLRFKRAIGH-RDLFYLEDKDLEFKDVIDAPLPKAPLDTAV 121
           D AL L+NVEP+YGF +   + F+ A G  R+L++ E+K+++  D+I+ PLP+ PLD  +
Sbjct: 72  DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131

Query: 122 FCHWLAIEGVQPAIPENAP--------VEVILPPSDVKINEQK----------------- 181
             HWL+IEG QPAIPEN P         E   P    K  +++                 
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGK 191

Query: 182 ----------EGLPVDIKLPVKHILSKELQLYFDKITELVVSRSNSVLFKKALVSLSTDS 241
                     EG P+ +K    H LS E QLY+ +ITE  V  S      +AL S++TD 
Sbjct: 192 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQSIATDP 251

Query: 242 GLHPLVPYFTCFIADEVARGL--GDYSLLFALMRVVWSLLQNPHIHIEPYLHQMMPSVVT 301
           GL+ ++P F+ FI++ V   +   + +LL  LMR+V +L+ NP +++E Y+H+++P+V+T
Sbjct: 252 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 311

Query: 302 CLVAKRLGNRLS-DNHWELRDFTAKVVALICKRFGHVYNTLQTKLTKTLLNAFLDPKRSL 350
           C+V+++L  R   DNHW LRDF A++VA ICK F    N +Q+++TKT   +++D K   
Sbjct: 312 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 371

[Close]
BLAST of Cp4.1LG04g03840 vs. TrEMBL
Match: A0A0A0KEI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G418910 PE=4 SV=1)

HSP 1 Score: 984.2 bits (2543), Expect = 6.5e-284
Identity = 491/543 (90.42%), Postives = 514/543 (94.66%), Query Frame = 1 

Query: 1   MSIVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD 60
           MSI+PKEN+EVIAQCIGINNLS DVAL +APDVEYRLREIMQEAIKCMRHSKRTTLTA+D
Sbjct: 1   MSIIPKENIEVIAQCIGINNLSSDVALDIAPDVEYRLREIMQEAIKCMRHSKRTTLTAND 60

Query: 61  VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDVIDAPLPKAPLDTAV 120
           VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKD+IDAPLPKAP DTAV
Sbjct: 61  VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDIIDAPLPKAPFDTAV 120

Query: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDVKINEQKEGLPVDIKLPVKHILSKELQLYFDK 180
           FCHWLAIEGVQPAIPENAPVEVILPPSD K NEQ  GLPVDIKLPVKHILSKELQLYFDK
Sbjct: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDAKSNEQMGGLPVDIKLPVKHILSKELQLYFDK 180

Query: 181 ITELVVSRSNSVLFKKALVSLSTDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW 240
           ITELVVSRS+S+LFKKALVSL+TDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW
Sbjct: 181 ITELVVSRSSSILFKKALVSLATDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW 240

Query: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRLSDNHWELRDFTAKVVALICKRFGHVY 300
           SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNR SDNHWELRDFTAKVVALICKRFGHVY
Sbjct: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRFSDNHWELRDFTAKVVALICKRFGHVY 300

Query: 301 NTLQTKLTKTLLNAFLDPKRSLTQHYGAVQGLAALGMNVVHLLVLPNLEPYLRFLEPEML 360
           NTLQTKLTKTLLNAFLDPKR+LTQHYGA+QGLAALGMNVVHLL+LPNLEPYL  LEPEML
Sbjct: 301 NTLQTKLTKTLLNAFLDPKRALTQHYGAIQGLAALGMNVVHLLILPNLEPYLGLLEPEML 360

Query: 361 LASQKNEMKRHEAWRVYGALLRAVGQYIYDRVKIFPPLPSTLAGSVLRTNAKVITTAFSN 420
           LA+QKNEMKRHEAWRVYGALLRAVGQ IYD VKIFPPLPS  AGS+LRTNA+VITT F N
Sbjct: 361 LANQKNEMKRHEAWRVYGALLRAVGQCIYDHVKIFPPLPSMPAGSILRTNARVITTTFLN 420

Query: 421 KRKSNADHLEGQPPLKKMVIDGPMGVTPTNSSASYMEGTVIPAASGNSNLISPTSSRPMQ 480
           KRK NADHLEGQPPLKKMV+D PMGV PTNSSAS+MEG V PA+S NS+LI PTSS+P+Q
Sbjct: 421 KRKENADHLEGQPPLKKMVMDSPMGVMPTNSSASHMEGAVNPASSSNSSLILPTSSQPLQ 480

Query: 481 DETISGSTSSKGKRDDQILKRSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIPSPELS 540
           +ETI GS S KGK DDQILKRSAVLSQVWKEDL SGKLLTSMLDLFGESM CFIP+PELS
Sbjct: 481 NETIPGSNSRKGKYDDQILKRSAVLSQVWKEDLKSGKLLTSMLDLFGESMLCFIPAPELS 540

Query: 541 LFL 544
           +FL
Sbjct: 541 MFL 543

[Close]
BLAST of Cp4.1LG04g03840 vs. TrEMBL
Match: A0A0A0K1B8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037630 PE=4 SV=1)

HSP 1 Score: 980.3 bits (2533), Expect = 9.3e-283
Identity = 492/544 (90.44%), Postives = 519/544 (95.40%), Query Frame = 1 

Query: 1   MSIVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD 60
           MS VPKEN+EVIAQC+GINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD
Sbjct: 1   MSAVPKENIEVIAQCVGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD 60

Query: 61  VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDVIDAPLPKAPLDTAV 120
           VDGALNLRNVEPMYGFASGGPLRFKRA+GHRDLFYLEDKDLEFKDVIDAPLPKAPLD AV
Sbjct: 61  VDGALNLRNVEPMYGFASGGPLRFKRAMGHRDLFYLEDKDLEFKDVIDAPLPKAPLDAAV 120

Query: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDVKINEQKEGLPVDIKLPVKHILSKELQLYFDK 180
           FCHWLAIEGVQPAIPENAPVEVILPPSD K +EQK+ +PVDIKLPVKHILSKELQLYFDK
Sbjct: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDTKSSEQKDEVPVDIKLPVKHILSKELQLYFDK 180

Query: 181 ITELVVSRSNSVLFKKALVSLSTDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW 240
           ITELVVSRS++ LFKKALVSL+TDSGLHPLVPYFTC+IADEVARGLGDYSLLFALMRVVW
Sbjct: 181 ITELVVSRSSTDLFKKALVSLATDSGLHPLVPYFTCYIADEVARGLGDYSLLFALMRVVW 240

Query: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRLSDNHWELRDFTAKVVALICKRFGHVY 300
           SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLG+R SDNHWELRDFTAKVVALICKRFGHVY
Sbjct: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGSRFSDNHWELRDFTAKVVALICKRFGHVY 300

Query: 301 NTLQTKLTKTLLNAFLDPKRSLTQHYGAVQGLAALGMNVVHLLVLPNLEPYLRFLEPEML 360
           NTLQTKLTKTLLNAFLDPKRSLTQHYGA++GLAALGMNVVHLL+LPNLEPYL  LEPEML
Sbjct: 301 NTLQTKLTKTLLNAFLDPKRSLTQHYGAIRGLAALGMNVVHLLILPNLEPYLGLLEPEML 360

Query: 361 LASQKNEMKRHEAWRVYGALLRAVGQYIYDRVKIFPPLPSTLAGSVLRTNAKVITTAFSN 420
           LA+QKNEMKRHEAW VYGALLRAVGQ IY+R+KIFPPL ST AGSVLRTNA+ ITT F N
Sbjct: 361 LANQKNEMKRHEAWHVYGALLRAVGQCIYERIKIFPPLLSTPAGSVLRTNARTITTTFPN 420

Query: 421 KRKSNADHLEGQPPLKKMVIDGPMGVTPTNSSASYMEGTVIPAASGNSNLISPTSSRPMQ 480
           KRK+NAD+LEGQPPLK+M IDGPMGV  TNSSAS+MEGTV+PAASGNSNL+SPTSS  MQ
Sbjct: 421 KRKANADYLEGQPPLKRMSIDGPMGVMLTNSSASHMEGTVVPAASGNSNLVSPTSSGQMQ 480

Query: 481 DETI-SGSTSSKGKRDDQILKRSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIPSPEL 540
           +E I SGSTS KGK DDQILK+SAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIP+PEL
Sbjct: 481 NEAISSGSTSRKGKHDDQILKKSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIPAPEL 540

Query: 541 SLFL 544
           SLFL
Sbjct: 541 SLFL 544

[Close]
BLAST of Cp4.1LG04g03840 vs. TrEMBL
Match: M5WT17_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003876mg PE=4 SV=1)

HSP 1 Score: 815.8 bits (2106), Expect = 3.0e-233
Identity = 410/545 (75.23%), Postives = 469/545 (86.06%), Query Frame = 1 

Query: 1   MSIVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD 60
           MSIVPKENVEVIAQ IGINNLSPDVALA+APDVEYRLRE+MQEAIKCMRHS+RT LTADD
Sbjct: 1   MSIVPKENVEVIAQSIGINNLSPDVALALAPDVEYRLREVMQEAIKCMRHSRRTRLTADD 60

Query: 61  VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDVIDAPLPKAPLDTAV 120
           VDGALNLRNVEP+YG+ SGGPLRFKRAIGHRDLFY++DKD+EFKDVI+APLPKAPLDT +
Sbjct: 61  VDGALNLRNVEPIYGYVSGGPLRFKRAIGHRDLFYIDDKDVEFKDVIEAPLPKAPLDTGI 120

Query: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDVKINEQKE-GLPVDIKLPVKHILSKELQLYFD 180
            CHWLAIEGVQPAIPENAPVEV+  PSD K  EQK+ G+PVDIKLPVKHILS+ELQLYFD
Sbjct: 121 VCHWLAIEGVQPAIPENAPVEVLAAPSDSKKYEQKDDGIPVDIKLPVKHILSRELQLYFD 180

Query: 181 KITELVVSRSNSVLFKKALVSLSTDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVV 240
           KITELVVSRS+ V+FK+ALVSL+TDSGLHPLVPYFTCFIADEV+RGL DY LLFALMRVV
Sbjct: 181 KITELVVSRSDLVIFKEALVSLATDSGLHPLVPYFTCFIADEVSRGLNDYPLLFALMRVV 240

Query: 241 WSLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRLSDNHWELRDFTAKVVALICKRFGHV 300
            SLLQNPH+HIEPYLHQ+MPSVVTCLVAKRLGNR +DNHWELRDFTA +VA ICKRFGHV
Sbjct: 241 RSLLQNPHMHIEPYLHQLMPSVVTCLVAKRLGNRFADNHWELRDFTANLVASICKRFGHV 300

Query: 301 YNTLQTKLTKTLLNAFLDPKRSLTQHYGAVQGLAALGMNVVHLLVLPNLEPYLRFLEPEM 360
           YNTLQ++LTKTL+NAFLDPKR+LTQHYGA+QGLAALG +VV LLVLPNLE YLR LEPE+
Sbjct: 301 YNTLQSRLTKTLVNAFLDPKRTLTQHYGAIQGLAALGPSVVRLLVLPNLETYLRLLEPEL 360

Query: 361 LLASQKNEMKRHEAWRVYGALLRAVGQYIYDRVKIFPPLPSTLAGSVLRTNAKVITTAFS 420
           LL  QKNEMKRHEAWRVYGALL A GQ IYDR+K+FP LPS    S   T+ +VIT    
Sbjct: 361 LLDKQKNEMKRHEAWRVYGALLNAAGQCIYDRLKMFPLLPSPAPQSFWSTSQRVIT--MP 420

Query: 421 NKRKSNADHLEGQPPLKKMVIDGPMGVTPTNSSASYMEGTV-IPAASGNSNLISPTSSRP 480
           NKRK + +H+E QPPLKK+  DGP G+ PTNSS S+ME  +  PA SG+ +   P+SS  
Sbjct: 421 NKRKGSVEHMEEQPPLKKIATDGPTGLVPTNSSPSHMEVEIATPAPSGDPDAAPPSSSGQ 480

Query: 481 MQDETISGSTSSKGKRDDQILKRSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIPSPE 540
           M +E +S S S + +   + LK+SA+L+QVWK+DLNSG LL S+ +LFGE +  F+P+PE
Sbjct: 481 MPNEGVSNSRSRRDRASGRSLKKSALLTQVWKDDLNSGHLLVSLFELFGEDILSFVPAPE 540

Query: 541 LSLFL 544
           + LFL
Sbjct: 541 MCLFL 543

[Close]
BLAST of Cp4.1LG04g03840 vs. TrEMBL
Match: W9RID7_9ROSA (Transcription initiation factor TFIID subunit 6 OS=Morus notabilis GN=L484_004040 PE=4 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 4.4e-224
Identity = 400/546 (73.26%), Postives = 467/546 (85.53%), Query Frame = 1 

Query: 1   MSIVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD 60
           MSIVPKE++EVIAQ IGINNLS DVAL++APDVEYRLREIMQEA+KCMRHS+RT +T DD
Sbjct: 1   MSIVPKESIEVIAQSIGINNLSSDVALSLAPDVEYRLREIMQEAVKCMRHSRRTRMTVDD 60

Query: 61  VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDVIDAPLPKAPLDTAV 120
           VD AL+LRNVEP+YGFASGG LRFKRA+GHRDLFY++DKD++FKDVI+APLPK PLDTAV
Sbjct: 61  VDAALDLRNVEPVYGFASGGRLRFKRAVGHRDLFYIDDKDVDFKDVIEAPLPKVPLDTAV 120

Query: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDVKINEQKEGLPVDIKLPVKHILSKELQLYFDK 180
           F HWLAIEGVQPAIPENAPVEVI  P D K +EQK+ +PVDIKLPVKH+LS+ELQLYFD+
Sbjct: 121 FVHWLAIEGVQPAIPENAPVEVIAAPFDSKKDEQKDDVPVDIKLPVKHVLSRELQLYFDR 180

Query: 181 ITELVVSRSNSVLFKKALVSLSTDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW 240
           ITELVVS+S+SVLFK+ALVSLSTDSGLHPLVPYF+CFIADEVARGL D+ LLFALMRVVW
Sbjct: 181 ITELVVSKSDSVLFKEALVSLSTDSGLHPLVPYFSCFIADEVARGLNDFHLLFALMRVVW 240

Query: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRLSDNHWELRDFTAKVVALICKRFGHVY 300
           SLLQNP+IHIEPYLHQ+MPSVVTCLVAKRLGNR SDNHW+LRDFTA +VA ICKRFGHVY
Sbjct: 241 SLLQNPNIHIEPYLHQLMPSVVTCLVAKRLGNRFSDNHWQLRDFTANLVASICKRFGHVY 300

Query: 301 NTLQTKLTKTLLNAFLDPKRSLTQHYGAVQGLAALGMNVVHLLVLPNLEPYLRFLEPEML 360
           NTLQT+LTKTL+NAFLDPKR+LTQHYGA+QGL ALG NVV LL+LPNL+PYL+ LEPE+L
Sbjct: 301 NTLQTRLTKTLVNAFLDPKRALTQHYGAIQGLTALGPNVVRLLILPNLKPYLQLLEPELL 360

Query: 361 LASQKNEMKRHEAWRVYGALLRAVGQYIYDRVKIFPPLPSTLAGSVLRTNAKVITTAFSN 420
           L+ QKNEMKR+EAWRVYGALLRA G  IYDR+KIFPPL S +   + + NA V T    N
Sbjct: 361 LSRQKNEMKRYEAWRVYGALLRAAGNCIYDRLKIFPPLQSPVPHPIWKANAGVATIT-PN 420

Query: 421 KRKSNADHLEGQPPLKKMVIDGPMGVTPTNSSASYMEG-TVIPAASGNSNL--ISPTSSR 480
           KRK+  D  E QPPLK+M IDGP  V  +NSS S++ G T   + SG++N    SP+SS+
Sbjct: 421 KRKAIMDDTEQQPPLKRMEIDGPTSVPSSNSSPSHLPGETSAISNSGDTNAGPSSPSSSQ 480

Query: 481 PMQDETISGSTSSKGKRDDQILKRSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIPSP 540
            M  E +S    +K K + + LK SA+L+QVWK+DLNSG LL S+ +LFGES+  FIP+P
Sbjct: 481 -MPAEIVS---DTKSKGNCKYLKTSAILTQVWKDDLNSGHLLVSLFELFGESILSFIPAP 540

Query: 541 ELSLFL 544
           E+SLF+
Sbjct: 541 EMSLFI 541

[Close]
BLAST of Cp4.1LG04g03840 vs. TrEMBL
Match: D7TE54_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g00300 PE=4 SV=1)

HSP 1 Score: 783.9 bits (2023), Expect = 1.3e-223
Identity = 399/545 (73.21%), Postives = 460/545 (84.40%), Query Frame = 1 

Query: 1   MSIVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD 60
           MSIV KE +EVIAQ IGI NLS DVALA+APDVEYR+RE+MQEAIKCMRHSKRT LT DD
Sbjct: 1   MSIVSKETIEVIAQSIGIANLSADVALALAPDVEYRMREVMQEAIKCMRHSKRTVLTTDD 60

Query: 61  VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDVIDAPLPKAPLDTAV 120
           VD ALNLRNVEP+YGF SGGPLRFKRA+GH++LFY++DKDL+FKDVI+APLPKAPLD AV
Sbjct: 61  VDIALNLRNVEPIYGFTSGGPLRFKRAVGHKNLFYIDDKDLDFKDVIEAPLPKAPLDAAV 120

Query: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDVKINEQKE-GLPVDIKLPVKHILSKELQLYFD 180
            CHWLAIEGVQPAIPENAPVEVI  PSD K  EQK+ GLPVDIKLP+KH+LS+ELQLYFD
Sbjct: 121 VCHWLAIEGVQPAIPENAPVEVIAAPSDGKKFEQKDDGLPVDIKLPIKHVLSRELQLYFD 180

Query: 181 KITELVVSRSNSVLFKKALVSLSTDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVV 240
           KI +L V+RS+S LFK+ALVSL+TDSGLHPLVPYFT FI+DEV+RGL D++LLFALMRVV
Sbjct: 181 KIIDLTVNRSDSALFKEALVSLATDSGLHPLVPYFTYFISDEVSRGLNDFNLLFALMRVV 240

Query: 241 WSLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRLSDNHWELRDFTAKVVALICKRFGHV 300
           WSLLQNPHIHIEPYLHQ+MPSVVTCLVAKR+GNRL+DNHWELRDFTA +VA ICKRFGHV
Sbjct: 241 WSLLQNPHIHIEPYLHQLMPSVVTCLVAKRIGNRLADNHWELRDFTANLVASICKRFGHV 300

Query: 301 YNTLQTKLTKTLLNAFLDPKRSLTQHYGAVQGLAALGMNVVHLLVLPNLEPYLRFLEPEM 360
           YN LQT+LTKTLL+AFLDPKRS+TQHYGA+QGLAALG N+V LL++PNLEPYLR LEPEM
Sbjct: 301 YNNLQTRLTKTLLHAFLDPKRSMTQHYGAIQGLAALGPNMVRLLIVPNLEPYLRLLEPEM 360

Query: 361 LLASQKNEMKRHEAWRVYGALLRAVGQYIYDRVKIFPPLPSTLAGSVLRTNAKVITTAFS 420
           LL  QKNE+KRHEAW VYGALLRA GQ IYDR+K+FP LPS  A  V RTN +V+T+   
Sbjct: 361 LLEKQKNELKRHEAWCVYGALLRATGQSIYDRLKMFPALPSPPA-RVFRTNGRVVTSP-P 420

Query: 421 NKRKSNADHLEGQPPLKKMVIDGPMGVTPTNSSASYM-EGTVIPAASGNSNLISPTSSRP 480
           NKRK+N +HLE QP LKK+  DGPM V PTN S++     T  P  S + ++   +SSR 
Sbjct: 421 NKRKANNEHLEQQPSLKKIATDGPMDVVPTNLSSNMQPPETKGPVPSTDPDMGPSSSSRQ 480

Query: 481 MQDETISGSTSSKGKRDDQILKRSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIPSPE 540
           +    IS S   KGK D + LK SAVL+Q W++DL SG LL S+ +LFGES+  FIP+PE
Sbjct: 481 IPHGNISDSRDRKGKGDSRALKMSAVLTQTWRDDLKSGHLLVSLFELFGESILPFIPAPE 540

Query: 541 LSLFL 544
           +SLFL
Sbjct: 541 MSLFL 543

[Close]
BLAST of Cp4.1LG04g03840 vs. TAIR10
Match: AT1G04950.1 (AT1G04950.1 TATA BOX ASSOCIATED FACTOR II 59)

HSP 1 Score: 682.6 bits (1760), Expect = 2.0e-196
Identity = 347/549 (63.21%), Postives = 428/549 (77.96%), Query Frame = 1 

Query: 1   MSIVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD 60
           MSIVPKE VEVIAQ IGI NL P+ AL +APDVEYR+REIMQEAIKCMRHSKRTTLTA D
Sbjct: 1   MSIVPKETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASD 60

Query: 61  VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDVIDAPLPKAPLDTAV 120
           VDGALNLRNVEP+YGFASGGP RF++AIGHRDLFY +D++++FKDVI+APLPKAPLDT +
Sbjct: 61  VDGALNLRNVEPIYGFASGGPFRFRKAIGHRDLFYTDDREVDFKDVIEAPLPKAPLDTEI 120

Query: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDVKINEQKEGLPVDIKLPVKHILSKELQLYFDK 180
            CHWLAIEGVQPAIPENAP+EVI  P++ KI+EQK+G  +D++LPVKH+LS+ELQLYF K
Sbjct: 121 VCHWLAIEGVQPAIPENAPLEVIRAPAETKIHEQKDGPLIDVRLPVKHVLSRELQLYFQK 180

Query: 181 ITELVVSRSNSVLFKKALVSLSTDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW 240
           I EL +S+SN  L+K+ALVSL++DSGLHPLVPYFT FIADEV+ GL D+ LLF LM +V 
Sbjct: 181 IAELAMSKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGLNDFRLLFNLMHIVR 240

Query: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRLSDNHWELRDFTAKVVALICKRFGHVY 300
           SLLQNPHIHIEPYLHQ+MPSVVTCLV+++LGNR +DNHWELRDF A +V+LICKR+G VY
Sbjct: 241 SLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDFAANLVSLICKRYGTVY 300

Query: 301 NTLQTKLTKTLLNAFLDPKRSLTQHYGAVQGLAALGMNVVHLLVLPNLEPYLRFLEPEML 360
            TLQ++LT+TL+NA LDPK++LTQHYGA+QGLAALG  VV LL+L NLEPYL  LEPE+ 
Sbjct: 301 ITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSNLEPYLSLLEPELN 360

Query: 361 LASQKNEMKRHEAWRVYGALLRAVGQYIYDRVKIFPPLPSTLAGSVLRTNAK-VITTAFS 420
              QKN+MK +EAWRVYGALLRA G  I+ R+KIFPPLPS     + +   K  I +   
Sbjct: 361 AEKQKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPLPSPSPSFLHKGKGKGKIISTDP 420

Query: 421 NKRKSNADHLEGQPPLKKMV-IDGPMGVTPTNSSASYMEGTVIPAASGN--SNLISPTSS 480
           +KRK + D  E Q P K+++ +DGP GV   + S S       P  + N   N + P+SS
Sbjct: 421 HKRKLSVDSSENQSPQKRLITMDGPDGVHSQDQSGSAPMQVDNPVENDNPPQNSVQPSSS 480

Query: 481 RPMQDETISGSTSSKGKRD--DQILKRSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFI 540
               D   S S + K K     + +   A+L Q+WK+DL+SG+LL  + +L+G+ +  FI
Sbjct: 481 EQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRLLVKLHELYGDRILPFI 540

Query: 541 PSPELSLFL 544
           PS E+S+FL
Sbjct: 541 PSTEMSVFL 549

[Close]
BLAST of Cp4.1LG04g03840 vs. TAIR10
Match: AT1G54360.2 (AT1G54360.2 TBP-ASSOCIATED FACTOR 6B)

HSP 1 Score: 510.4 bits (1313), Expect = 1.4e-144
Identity = 276/564 (48.94%), Postives = 372/564 (65.96%), Query Frame = 1 

Query: 3   IVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQ-------------------- 62
           +V KE++EVIAQ IG++ LSPDV+ A+APDVEYR+RE+MQ                    
Sbjct: 1   MVTKESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQVYHQLQLYFCPLISSLTCRR 60

Query: 63  ---EAIKCMRHSKRTTLTADDVDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDK 122
              EAIKCMRH++RTTL A DVD AL+ RN+EP  G  S   +RFKRA  +RDL++ +DK
Sbjct: 61  NLQEAIKCMRHARRTTLMAHDVDSALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDK 120

Query: 123 DLEFKDVIDAPLPKAPLDTAVFCHWLAIEGVQPAIPENAPVEVILPPSDVKINEQKEGLP 182
           D+E K+VI+APLP AP D +VF HWLAI+G+QP+IP+N+P++ I   SD+K +E K    
Sbjct: 121 DVELKNVIEAPLPNAPPDASVFLHWLAIDGIQPSIPQNSPLQAI---SDLKRSEYK---- 180

Query: 183 VDIKLPVKHILSKELQLYFDKITELVVSRSNSVLFKKALVSLSTDSGLHPLVPYFTCFIA 242
            D  L  + +LSK+LQ+YFDK+TE  +++S S LF++AL SL  D GLHPLVP+FT FIA
Sbjct: 181 -DDGLAARQVLSKDLQIYFDKVTEWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIA 240

Query: 243 DEVARGLGDYSLLFALMRVVWSLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRLSDNHW 302
           +E+ + + +Y +L ALMR+  SLL NPH+HIEPYLHQ+MPS++TCL+AKRLG R SDNHW
Sbjct: 241 EEIVKNMDNYPILLALMRLARSLLHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHW 300

Query: 303 ELRDFTAKVVALICKRFGHVYNTLQTKLTKTLLNAFLDPKRSLTQHYGAVQGLAALGMNV 362
           +LR+FTA  VA  CKRFGHVY+ L  ++T++LL+ FLDP ++L QHYGA+QG+ ALG+N+
Sbjct: 301 DLRNFTASTVASTCKRFGHVYHNLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNM 360

Query: 363 VHLLVLPNLEPYLRFLEPEMLLASQKNEMKRHEAWRVYGALLRAVGQYIYDRVKIFPPLP 422
           V  LVLPNL PYL  L PEM L  QK E KRH AW VYGAL+ A G+ +Y+R+K    L 
Sbjct: 361 VRFLVLPNLGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLL 420

Query: 423 STLAGSVLRTNAKVITTAFSNKRKSNADHLEGQPPLKKMVIDGPMGVTPTNSSASYMEGT 482
           S    SV +TN K +T+   +KRK+++D+L  QPPLKK+ +    G+   +S+   M GT
Sbjct: 421 SPPTSSVWKTNGK-LTSPRQSKRKASSDNLTHQPPLKKIAVG---GIIQMSSTQMQMRGT 480

Query: 483 VIPAASGNSNLISPTSSRPMQDETISGSTSSKGKRDDQILKRSAVLSQVWKEDLNSGKLL 542
                  +++  +   + P    TI+  TS+    D                       L
Sbjct: 481 TTVPQQSHTDADARHHNSP---STIAPKTSAAAGTD-------------------VDNYL 527

Query: 543 TSMLDLFGESMFCFIPSPELSLFL 544
             + + FGESM  F P+ ELS FL
Sbjct: 541 FPLFEYFGESMLMFTPTHELSFFL 527

[Close]
BLAST of Cp4.1LG04g03840 vs. NCBI nr
Match: gi|659110962|ref|XP_008455502.1| (PREDICTED: transcription initiation factor TFIID subunit 6-like [Cucumis melo])

HSP 1 Score: 991.5 bits (2562), Expect = 5.8e-286
Identity = 498/544 (91.54%), Postives = 524/544 (96.32%), Query Frame = 1 

Query: 1   MSIVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD 60
           MSIV KEN+EVIA+C+GINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD
Sbjct: 1   MSIVSKENIEVIAECVGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD 60

Query: 61  VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDVIDAPLPKAPLDTAV 120
           VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDVIDAPLPKAPLDTAV
Sbjct: 61  VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDVIDAPLPKAPLDTAV 120

Query: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDVKINEQKEGLPVDIKLPVKHILSKELQLYFDK 180
            CHWLAIEGVQPAIPENAPVEVILPPSD K +EQK+ +PVDIKLPVKHILSKELQLYFDK
Sbjct: 121 SCHWLAIEGVQPAIPENAPVEVILPPSDAKSSEQKDEVPVDIKLPVKHILSKELQLYFDK 180

Query: 181 ITELVVSRSNSVLFKKALVSLSTDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW 240
           ITELVVSRS++ LFKKALVSL+TDSGLHPLVPYFTC+IADEVARGLGDYSLLFALMRVVW
Sbjct: 181 ITELVVSRSSTDLFKKALVSLATDSGLHPLVPYFTCYIADEVARGLGDYSLLFALMRVVW 240

Query: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRLSDNHWELRDFTAKVVALICKRFGHVY 300
           SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNR SDNHWELRDFTAKVVALICKRFGHVY
Sbjct: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRFSDNHWELRDFTAKVVALICKRFGHVY 300

Query: 301 NTLQTKLTKTLLNAFLDPKRSLTQHYGAVQGLAALGMNVVHLLVLPNLEPYLRFLEPEML 360
           NTLQTKLTKTLLNAFLDPKRSLTQHYGA++GLAALGMNVVHLL+LPNLEPYL  LEPEML
Sbjct: 301 NTLQTKLTKTLLNAFLDPKRSLTQHYGAIRGLAALGMNVVHLLILPNLEPYLGLLEPEML 360

Query: 361 LASQKNEMKRHEAWRVYGALLRAVGQYIYDRVKIFPPLPSTLAGSVLRTNAKVITTAFSN 420
           LASQKNEMKRHEAWRVYGALLRAVGQ IY+RVKIFPPLPST AGSVLRTNA++ITT F N
Sbjct: 361 LASQKNEMKRHEAWRVYGALLRAVGQCIYERVKIFPPLPSTPAGSVLRTNARIITTTFPN 420

Query: 421 KRKSNADHLEGQPPLKKMVIDGPMGVTPTNSSASYMEGTVIPAASGNSNLISPTSSRPMQ 480
           KRK+NAD+LEGQPPLK+M+IDGPMGV  TNSSAS+MEGTV+PAASGNSN++SPTSS  MQ
Sbjct: 421 KRKANADYLEGQPPLKRMLIDGPMGVMLTNSSASHMEGTVVPAASGNSNVVSPTSSGQMQ 480

Query: 481 DETI-SGSTSSKGKRDDQILKRSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIPSPEL 540
           +ETI SGSTS KGK DDQILKRSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIP+PEL
Sbjct: 481 NETISSGSTSRKGKHDDQILKRSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIPAPEL 540

Query: 541 SLFL 544
           SLFL
Sbjct: 541 SLFL 544

[Close]
BLAST of Cp4.1LG04g03840 vs. NCBI nr
Match: gi|778716397|ref|XP_004140111.2| (PREDICTED: transcription initiation factor TFIID subunit 6 [Cucumis sativus])

HSP 1 Score: 984.2 bits (2543), Expect = 9.3e-284
Identity = 491/543 (90.42%), Postives = 514/543 (94.66%), Query Frame = 1 

Query: 1   MSIVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD 60
           MSI+PKEN+EVIAQCIGINNLS DVAL +APDVEYRLREIMQEAIKCMRHSKRTTLTA+D
Sbjct: 1   MSIIPKENIEVIAQCIGINNLSSDVALDIAPDVEYRLREIMQEAIKCMRHSKRTTLTAND 60

Query: 61  VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDVIDAPLPKAPLDTAV 120
           VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKD+IDAPLPKAP DTAV
Sbjct: 61  VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDIIDAPLPKAPFDTAV 120

Query: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDVKINEQKEGLPVDIKLPVKHILSKELQLYFDK 180
           FCHWLAIEGVQPAIPENAPVEVILPPSD K NEQ  GLPVDIKLPVKHILSKELQLYFDK
Sbjct: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDAKSNEQMGGLPVDIKLPVKHILSKELQLYFDK 180

Query: 181 ITELVVSRSNSVLFKKALVSLSTDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW 240
           ITELVVSRS+S+LFKKALVSL+TDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW
Sbjct: 181 ITELVVSRSSSILFKKALVSLATDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW 240

Query: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRLSDNHWELRDFTAKVVALICKRFGHVY 300
           SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNR SDNHWELRDFTAKVVALICKRFGHVY
Sbjct: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRFSDNHWELRDFTAKVVALICKRFGHVY 300

Query: 301 NTLQTKLTKTLLNAFLDPKRSLTQHYGAVQGLAALGMNVVHLLVLPNLEPYLRFLEPEML 360
           NTLQTKLTKTLLNAFLDPKR+LTQHYGA+QGLAALGMNVVHLL+LPNLEPYL  LEPEML
Sbjct: 301 NTLQTKLTKTLLNAFLDPKRALTQHYGAIQGLAALGMNVVHLLILPNLEPYLGLLEPEML 360

Query: 361 LASQKNEMKRHEAWRVYGALLRAVGQYIYDRVKIFPPLPSTLAGSVLRTNAKVITTAFSN 420
           LA+QKNEMKRHEAWRVYGALLRAVGQ IYD VKIFPPLPS  AGS+LRTNA+VITT F N
Sbjct: 361 LANQKNEMKRHEAWRVYGALLRAVGQCIYDHVKIFPPLPSMPAGSILRTNARVITTTFLN 420

Query: 421 KRKSNADHLEGQPPLKKMVIDGPMGVTPTNSSASYMEGTVIPAASGNSNLISPTSSRPMQ 480
           KRK NADHLEGQPPLKKMV+D PMGV PTNSSAS+MEG V PA+S NS+LI PTSS+P+Q
Sbjct: 421 KRKENADHLEGQPPLKKMVMDSPMGVMPTNSSASHMEGAVNPASSSNSSLILPTSSQPLQ 480

Query: 481 DETISGSTSSKGKRDDQILKRSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIPSPELS 540
           +ETI GS S KGK DDQILKRSAVLSQVWKEDL SGKLLTSMLDLFGESM CFIP+PELS
Sbjct: 481 NETIPGSNSRKGKYDDQILKRSAVLSQVWKEDLKSGKLLTSMLDLFGESMLCFIPAPELS 540

Query: 541 LFL 544
           +FL
Sbjct: 541 MFL 543

[Close]
BLAST of Cp4.1LG04g03840 vs. NCBI nr
Match: gi|778723605|ref|XP_004144526.2| (PREDICTED: transcription initiation factor TFIID subunit 6 [Cucumis sativus])

HSP 1 Score: 980.3 bits (2533), Expect = 1.3e-282
Identity = 492/544 (90.44%), Postives = 519/544 (95.40%), Query Frame = 1 

Query: 1   MSIVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD 60
           MS VPKEN+EVIAQC+GINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD
Sbjct: 1   MSAVPKENIEVIAQCVGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD 60

Query: 61  VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDVIDAPLPKAPLDTAV 120
           VDGALNLRNVEPMYGFASGGPLRFKRA+GHRDLFYLEDKDLEFKDVIDAPLPKAPLD AV
Sbjct: 61  VDGALNLRNVEPMYGFASGGPLRFKRAMGHRDLFYLEDKDLEFKDVIDAPLPKAPLDAAV 120

Query: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDVKINEQKEGLPVDIKLPVKHILSKELQLYFDK 180
           FCHWLAIEGVQPAIPENAPVEVILPPSD K +EQK+ +PVDIKLPVKHILSKELQLYFDK
Sbjct: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDTKSSEQKDEVPVDIKLPVKHILSKELQLYFDK 180

Query: 181 ITELVVSRSNSVLFKKALVSLSTDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW 240
           ITELVVSRS++ LFKKALVSL+TDSGLHPLVPYFTC+IADEVARGLGDYSLLFALMRVVW
Sbjct: 181 ITELVVSRSSTDLFKKALVSLATDSGLHPLVPYFTCYIADEVARGLGDYSLLFALMRVVW 240

Query: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRLSDNHWELRDFTAKVVALICKRFGHVY 300
           SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLG+R SDNHWELRDFTAKVVALICKRFGHVY
Sbjct: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGSRFSDNHWELRDFTAKVVALICKRFGHVY 300

Query: 301 NTLQTKLTKTLLNAFLDPKRSLTQHYGAVQGLAALGMNVVHLLVLPNLEPYLRFLEPEML 360
           NTLQTKLTKTLLNAFLDPKRSLTQHYGA++GLAALGMNVVHLL+LPNLEPYL  LEPEML
Sbjct: 301 NTLQTKLTKTLLNAFLDPKRSLTQHYGAIRGLAALGMNVVHLLILPNLEPYLGLLEPEML 360

Query: 361 LASQKNEMKRHEAWRVYGALLRAVGQYIYDRVKIFPPLPSTLAGSVLRTNAKVITTAFSN 420
           LA+QKNEMKRHEAW VYGALLRAVGQ IY+R+KIFPPL ST AGSVLRTNA+ ITT F N
Sbjct: 361 LANQKNEMKRHEAWHVYGALLRAVGQCIYERIKIFPPLLSTPAGSVLRTNARTITTTFPN 420

Query: 421 KRKSNADHLEGQPPLKKMVIDGPMGVTPTNSSASYMEGTVIPAASGNSNLISPTSSRPMQ 480
           KRK+NAD+LEGQPPLK+M IDGPMGV  TNSSAS+MEGTV+PAASGNSNL+SPTSS  MQ
Sbjct: 421 KRKANADYLEGQPPLKRMSIDGPMGVMLTNSSASHMEGTVVPAASGNSNLVSPTSSGQMQ 480

Query: 481 DETI-SGSTSSKGKRDDQILKRSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIPSPEL 540
           +E I SGSTS KGK DDQILK+SAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIP+PEL
Sbjct: 481 NEAISSGSTSRKGKHDDQILKKSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIPAPEL 540

Query: 541 SLFL 544
           SLFL
Sbjct: 541 SLFL 544

[Close]
BLAST of Cp4.1LG04g03840 vs. NCBI nr
Match: gi|659097009|ref|XP_008449395.1| (PREDICTED: transcription initiation factor TFIID subunit 6-like [Cucumis melo])

HSP 1 Score: 976.9 bits (2524), Expect = 1.5e-281
Identity = 486/543 (89.50%), Postives = 515/543 (94.84%), Query Frame = 1 

Query: 1   MSIVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD 60
           MSI+PKEN+EVIAQCIGINNLS DVAL +APDVEYRLREIMQEAIKCMRHSKRTTLTADD
Sbjct: 1   MSIIPKENIEVIAQCIGINNLSSDVALDIAPDVEYRLREIMQEAIKCMRHSKRTTLTADD 60

Query: 61  VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDVIDAPLPKAPLDTAV 120
           VDGALNLRNVEPMYGF+SGG LRF+RAIGHRDLFYLEDKDLEFK++IDAPLPKAPLDTAV
Sbjct: 61  VDGALNLRNVEPMYGFSSGGLLRFRRAIGHRDLFYLEDKDLEFKEIIDAPLPKAPLDTAV 120

Query: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDVKINEQKEGLPVDIKLPVKHILSKELQLYFDK 180
           FCHWLAIEGVQPAIPENAPVEVILPPSD K NEQ  GLPVDIKLPVKHILSKELQLYFDK
Sbjct: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDAKSNEQMGGLPVDIKLPVKHILSKELQLYFDK 180

Query: 181 ITELVVSRSNSVLFKKALVSLSTDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW 240
           ITELVVS+S+S+LFKKALVSL+TDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW
Sbjct: 181 ITELVVSKSSSILFKKALVSLATDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW 240

Query: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRLSDNHWELRDFTAKVVALICKRFGHVY 300
           SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNR SDNHWELRDFTAKVVALICKRFGHVY
Sbjct: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRFSDNHWELRDFTAKVVALICKRFGHVY 300

Query: 301 NTLQTKLTKTLLNAFLDPKRSLTQHYGAVQGLAALGMNVVHLLVLPNLEPYLRFLEPEML 360
           NTLQTKLTKTLLNAFLDPKR+LTQHYGA+QGLAALGMNVVHLL+LPNLEPYL  LEPEML
Sbjct: 301 NTLQTKLTKTLLNAFLDPKRALTQHYGAIQGLAALGMNVVHLLILPNLEPYLGLLEPEML 360

Query: 361 LASQKNEMKRHEAWRVYGALLRAVGQYIYDRVKIFPPLPSTLAGSVLRTNAKVITTAFSN 420
           LA+QKNEMKRHEAWRVYGALLRAVGQ IYDRVKIFPPLPS  AGS+LRTNA+VITT F N
Sbjct: 361 LANQKNEMKRHEAWRVYGALLRAVGQCIYDRVKIFPPLPSMPAGSILRTNARVITTTFPN 420

Query: 421 KRKSNADHLEGQPPLKKMVIDGPMGVTPTNSSASYMEGTVIPAASGNSNLISPTSSRPMQ 480
           KRK+NADH+ GQ PLKKMV+D PMGV PTNSSAS+MEG V PA+SGNS+L+ PTSS+P+Q
Sbjct: 421 KRKANADHIRGQAPLKKMVMDSPMGVMPTNSSASHMEGAVNPASSGNSSLVLPTSSQPLQ 480

Query: 481 DETISGSTSSKGKRDDQILKRSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIPSPELS 540
           +E I GSTS KGK DDQILKRSAVLSQVWKEDL SGKLLTSMLDLFGESM CFIP+PELS
Sbjct: 481 NEIIPGSTSRKGKCDDQILKRSAVLSQVWKEDLKSGKLLTSMLDLFGESMLCFIPAPELS 540

Query: 541 LFL 544
           +FL
Sbjct: 541 MFL 543

[Close]
BLAST of Cp4.1LG04g03840 vs. NCBI nr
Match: gi|645247437|ref|XP_008229836.1| (PREDICTED: transcription initiation factor TFIID subunit 6 [Prunus mume])

HSP 1 Score: 815.8 bits (2106), Expect = 4.4e-233
Identity = 410/545 (75.23%), Postives = 470/545 (86.24%), Query Frame = 1 

Query: 1   MSIVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD 60
           MSIVPKENVEVIAQ IGINNLSPDVALA+APDVEYRLRE+MQEAIKCMRHS+RT LTADD
Sbjct: 1   MSIVPKENVEVIAQSIGINNLSPDVALALAPDVEYRLREVMQEAIKCMRHSRRTRLTADD 60

Query: 61  VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDVIDAPLPKAPLDTAV 120
           VDGALNLRNVEP+YG+ SGGPLRFKRAIGHRDLFY++DKD+EFKDVI+APLPKAPLDT +
Sbjct: 61  VDGALNLRNVEPIYGYVSGGPLRFKRAIGHRDLFYIDDKDVEFKDVIEAPLPKAPLDTGI 120

Query: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDVKINEQKE-GLPVDIKLPVKHILSKELQLYFD 180
            CHWLAIEGVQPAIPENAPVEV+  P D K  EQK+ G+PVDIKLPVKHILS+ELQLYFD
Sbjct: 121 VCHWLAIEGVQPAIPENAPVEVLAAPPDSKKYEQKDDGVPVDIKLPVKHILSRELQLYFD 180

Query: 181 KITELVVSRSNSVLFKKALVSLSTDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVV 240
           KITELVVSRS+ V+FK+ALVSL+TDSGLHPLVPYFTCFIADEV+RGL DY LLFALMRVV
Sbjct: 181 KITELVVSRSDLVIFKEALVSLATDSGLHPLVPYFTCFIADEVSRGLNDYPLLFALMRVV 240

Query: 241 WSLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRLSDNHWELRDFTAKVVALICKRFGHV 300
            SLLQNPH+HIEPYLHQ+MPSVVTCLVAKRLGNR +DNHWELRDFTA +VA ICKRFGHV
Sbjct: 241 RSLLQNPHMHIEPYLHQLMPSVVTCLVAKRLGNRFADNHWELRDFTANLVASICKRFGHV 300

Query: 301 YNTLQTKLTKTLLNAFLDPKRSLTQHYGAVQGLAALGMNVVHLLVLPNLEPYLRFLEPEM 360
           YNTLQ++LTKTL+NAFLDPKR+LTQHYGA+QGLAALG +VV LLVLPNLE YLR LEPE+
Sbjct: 301 YNTLQSRLTKTLVNAFLDPKRTLTQHYGAIQGLAALGPSVVRLLVLPNLESYLRLLEPEL 360

Query: 361 LLASQKNEMKRHEAWRVYGALLRAVGQYIYDRVKIFPPLPSTLAGSVLRTNAKVITTAFS 420
           LL  QKNEMKRHEAWRVYGALL A GQ IYDR+K+FP LPS    S  RT+ +VIT    
Sbjct: 361 LLDKQKNEMKRHEAWRVYGALLNAAGQCIYDRLKMFPLLPSPAPKSFWRTSQRVIT--MP 420

Query: 421 NKRKSNADHLEGQPPLKKMVIDGPMGVTPTNSSASYME-GTVIPAASGNSNLISPTSSRP 480
           NKRK + +H+E QPPLKK+  DGP G+ PTNSS S+ME  T  PA SG+++   P+S+  
Sbjct: 421 NKRKGSVEHMEEQPPLKKIATDGPTGIAPTNSSPSHMEVETATPAPSGDTDAGPPSSTGQ 480

Query: 481 MQDETISGSTSSKGKRDDQILKRSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIPSPE 540
           M +E +S S S + +   + LK+SA+L+QVWK+DLNSG LL S+ +LFGE +  F+P+PE
Sbjct: 481 MPNEGVSNSRSRRDRAAGRSLKKSALLTQVWKDDLNSGHLLVSLFELFGEDILSFVPAPE 540

Query: 541 LSLFL 544
           + LFL
Sbjct: 541 MCLFL 543

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g03840 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TAF6_ARATH3.6e-19563.21Transcription initiation factor TFIID subunit 6 OS=Arabidopsis thaliana GN=TAF6 ... [more]
TAF6B_ARATH2.5e-14348.94Transcription initiation factor TFIID subunit 6b OS=Arabidopsis thaliana GN=TAF6... [more]
TAF6_SCHPO6.6e-8841.05Transcription initiation factor TFIID subunit 6 OS=Schizosaccharomyces pombe (st... [more]
TAF6_XENLA4.0e-6938.32Transcription initiation factor TFIID subunit 6 OS=Xenopus laevis GN=taf6 PE=2 S... [more]
TAF6_HUMAN6.8e-6937.47Transcription initiation factor TFIID subunit 6 OS=Homo sapiens GN=TAF6 PE=1 SV=... [more]
BLAST of Cp4.1LG04g03840 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEI5_CUCSA6.5e-28490.42Uncharacterized protein OS=Cucumis sativus GN=Csa_6G418910 PE=4 SV=1[more]
A0A0A0K1B8_CUCSA9.3e-28390.44Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037630 PE=4 SV=1[more]
M5WT17_PRUPE3.0e-23375.23Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003876mg PE=4 SV=1[more]
W9RID7_9ROSA4.4e-22473.26Transcription initiation factor TFIID subunit 6 OS=Morus notabilis GN=L484_00404... [more]
D7TE54_VITVI1.3e-22373.21Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g00300 PE=4 SV=... [more]
BLAST of Cp4.1LG04g03840 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G04950.12.0e-19663.21 TATA BOX ASSOCIATED FACTOR II 59[more]
AT1G54360.21.4e-14448.94 TBP-ASSOCIATED FACTOR 6B[more]
BLAST of Cp4.1LG04g03840 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110962|ref|XP_008455502.1|5.8e-28691.54PREDICTED: transcription initiation factor TFIID subunit 6-like [Cucumis melo][more]
gi|778716397|ref|XP_004140111.2|9.3e-28490.42PREDICTED: transcription initiation factor TFIID subunit 6 [Cucumis sativus][more]
gi|778723605|ref|XP_004144526.2|1.3e-28290.44PREDICTED: transcription initiation factor TFIID subunit 6 [Cucumis sativus][more]
gi|659097009|ref|XP_008449395.1|1.5e-28189.50PREDICTED: transcription initiation factor TFIID subunit 6-like [Cucumis melo][more]
gi|645247437|ref|XP_008229836.1|4.4e-23375.23PREDICTED: transcription initiation factor TFIID subunit 6 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0046982protein heterodimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0051090regulation of sequence-specific DNA binding transcription factor activity
GO:0006352DNA-templated transcription, initiation
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like
IPR011442TAF6_C
IPR009072Histone-fold
IPR004823TAF_TATA-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0009860 pollen tube growth
biological_process GO:0051090 regulation of sequence-specific DNA binding transcription factor activity
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0006413 translational initiation
cellular_component GO:0005634 nucleus
cellular_component GO:0005840 ribosome
cellular_component GO:0000124 SAGA complex
cellular_component GO:0046695 SLIK (SAGA-like) complex
cellular_component GO:0005669 transcription factor TFIID complex
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0005488 binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g03840.1Cp4.1LG04g03840.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004823TATA box binding protein associated factor (TAF)PFAMPF02969TAFcoord: 1..65
score: 3.3
IPR004823TATA box binding protein associated factor (TAF)SMARTSM00803TAF_clscoord: 2..68
score: 3.2
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 1..66
score: 3.7
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 1..65
score: 1.27
IPR011442TAF6, C-terminal HEAT repeat domainPFAMPF07571TAF6_Ccoord: 261..348
score: 4.6
IPR011989Armadillo-like helicalGENE3DG3DSA:1.25.10.10coord: 235..403
score: 1.
IPR016024Armadillo-type foldunknownSSF48371ARM repeatcoord: 215..388
score: 4.8
NoneNo IPR availablePANTHERPTHR10221TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6coord: 1..543
score:
NoneNo IPR availablePANTHERPTHR10221:SF11TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6Bcoord: 1..543
score:

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g03840Cucsa.181090Cucumber (Gy14) v1cgycpeB0498
Cp4.1LG04g03840CmaCh11G017910Cucurbita maxima (Rimu)cmacpeB148
Cp4.1LG04g03840CmoCh11G018670Cucurbita moschata (Rifu)cmocpeB126
Cp4.1LG04g03840Cla015647Watermelon (97103) v1cpewmB675
Cp4.1LG04g03840Csa7G037630Cucumber (Chinese Long) v2cpecuB690
Cp4.1LG04g03840MELO3C018874Melon (DHL92) v3.5.1cpemeB609
Cp4.1LG04g03840ClCG02G002420Watermelon (Charleston Gray)cpewcgB596
Cp4.1LG04g03840CSPI07G03120Wild cucumber (PI 183967)cpecpiB692
Cp4.1LG04g03840Lsi11G013890Bottle gourd (USVL1VR-Ls)cpelsiB526
Cp4.1LG04g03840MELO3C018874.2Melon (DHL92) v3.6.1cpemedB721
Cp4.1LG04g03840CsaV3_7G003000Cucumber (Chinese Long) v3cpecucB0863
Cp4.1LG04g03840Bhi05G001244Wax gourdcpewgoB0852
Cp4.1LG04g03840CsGy7G002790Cucumber (Gy14) v2cgybcpeB964
Cp4.1LG04g03840Carg18051Silver-seed gourdcarcpeB1483
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g03840Silver-seed gourdcarcpeB0288
Cp4.1LG04g03840Cucumber (Chinese Long) v3cpecucB0828
Cp4.1LG04g03840Cucumber (Chinese Long) v3cpecucB0855
Cp4.1LG04g03840Wax gourdcpewgoB0862
Cp4.1LG04g03840Cucurbita pepo (Zucchini)cpecpeB267
Cp4.1LG04g03840Cucurbita pepo (Zucchini)cpecpeB304
Cp4.1LG04g03840Cucumber (Gy14) v1cgycpeB0395
Cp4.1LG04g03840Cucurbita maxima (Rimu)cmacpeB537
Cp4.1LG04g03840Cucurbita moschata (Rifu)cmocpeB492
Cp4.1LG04g03840Cucurbita moschata (Rifu)cmocpeB525
Cp4.1LG04g03840Wild cucumber (PI 183967)cpecpiB666
Cp4.1LG04g03840Cucumber (Chinese Long) v2cpecuB663
Cp4.1LG04g03840Bottle gourd (USVL1VR-Ls)cpelsiB520
Cp4.1LG04g03840Cucumber (Gy14) v2cgybcpeB235
Cp4.1LG04g03840Melon (DHL92) v3.6.1cpemedB773