Cp4.1LG04g02650 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g02650
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ethylene responsive factor
Location	Cp4.1LG04 : 7733529 .. 7734515 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGCACTATGGTAATTTCTGGAATTACTTCGTGGAGCTCTTATCCGGAAAATAATAATAATAAATCAAAGCAAGAAAACGGGCTTCAAGCGAATCTGGCAGAGCAGATTAAAAGAAGAAGAAAGAGGAATCGGAAAGCCGTTAGAGGAAATTAAAAAAAAAATCCTCTCCCAGAAATGGAGCTCCGGCACCGGCGGTAACATTTCTTCCATAGGAGGTGGTAGCTTAAACAGTCAAGAACCGGCAAAACTCCCTTGCATTTTTGTCTATCATCTCCGGAAACCACAACATCCTTTTGATTTGATTTCTTTTCACTGAACGCTTAATCGTCTTCTTCATCCATGAGGCGAGGCAGAGCCACAGATCCATTGGCAGTGGCGCAAACAGTTCATGGACCAGTTAAGGAAGTCCGATTCAGAGGTGTTCGGAAGCGTCCATGGGGCCGATACGCCGCCGAGATTAGAGATCCCTGGAAGAAGACACGCGTTTGGCTCGGCACCTTCGATACGGCGGAGGATGCTGCTAGAGCTTACGACGCCGCTGCTTTCTCTCTCCGCGGGCCGAAGGCGAAAACGAACTTTCCGTTGCATCCTTCGGCGATCTCTGTTCATCAGCAAATTCATTTCTCCCAGGAGCCTCATGATTCCCGCGGATTCTGCAAGATTAGCAACTCTCCTGTCAAAAGACCTACATCGAGTAGCCTGAGTTCCACCGTGGAGTCTTTTAGCGGACCGCGGGTTTCGATTCCGGCTACATCGGTTCCGAAGCTCCGCCGGAAGTCCCTGCCTCCAGTCTCGCCCGACGATTGCCACAGCGACTGCGATTCGTCGTCTTCCGTTGTTGAGGACAGTGAGGAATATGCTCAGACGCCGTCAATTCACAAGGTGTTGCCGTTCGATCTGAACCTACCTCCTCCACTGCAGTCACTGCAAGACATCGATATATCCGGTGATGATCTTCAAGTTACTACTCTATGTTTCTGA

mRNA sequence

ATGGAGGGCACTATGATTAGCAACTCTCCTGTCAAAAGACCTACATCGAGTAGCCTGAGTTCCACCGTGGAGTCTTTTAGCGGACCGCGGGTTTCGATTCCGGCTACATCGGTTCCGAAGCTCCGCCGGAAGTCCCTGCCTCCAGTCTCGCCCGACGATTGCCACAGCGACTGCGATTCGTCGTCTTCCGTTGTTGAGGACAGTGAGGAATATGCTCAGACGCCGTCAATTCACAAGGTGTTGCCGTTCGATCTGAACCTACCTCCTCCACTGCAGTCACTGCAAGACATCGATATATCCGGTGATGATCTTCAAGTTACTACTCTATGTTTCTGA

Coding sequence (CDS)

ATGGAGGGCACTATGATTAGCAACTCTCCTGTCAAAAGACCTACATCGAGTAGCCTGAGTTCCACCGTGGAGTCTTTTAGCGGACCGCGGGTTTCGATTCCGGCTACATCGGTTCCGAAGCTCCGCCGGAAGTCCCTGCCTCCAGTCTCGCCCGACGATTGCCACAGCGACTGCGATTCGTCGTCTTCCGTTGTTGAGGACAGTGAGGAATATGCTCAGACGCCGTCAATTCACAAGGTGTTGCCGTTCGATCTGAACCTACCTCCTCCACTGCAGTCACTGCAAGACATCGATATATCCGGTGATGATCTTCAAGTTACTACTCTATGTTTCTGA

Protein sequence

MEGTMISNSPVKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF

Homology

[Close]

BLAST of Cp4.1LG04g02650 vs. Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.1e-16
Identity = 58/113 (51.33%), Postives = 67/113 (59.29%), Query Frame = 1


Query: 12  KRPTSSSLSSTVESFSGPRVSIPA----TSVPKLRRKSLPPVSPDDCHSDCDSSSSVVE- 71
           +RPTSSS+SSTVESFSGPR   PA    T+    +    PPV PDDCHSDCDSSSSVV+ 
Sbjct: 119 QRPTSSSMSSTVESFSGPRPP-PAPRQQTTASSRKYTRSPPVVPDDCHSDCDSSSSVVDH 178

Query: 72  ---------DSEEYAQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLC 111
                    D++  A + S  K L FDLNLPPP+      D   DDL  T LC
Sbjct: 179 GDCEKENDNDNDNIASS-SFRKPLLFDLNLPPPMD-----DAGADDLHCTALC 224

[Close]

BLAST of Cp4.1LG04g02650 vs. Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.2e-14
Identity = 51/102 (50.00%), Postives = 62/102 (60.78%), Query Frame = 1


Query: 11  VKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRK--SLPPVSPDDCHSDCDSSSSVVEDS 70
           V RPTSSS+SSTVESFSGPR   P T  P   ++    PPV P+DCHSDCDSSSSV++D 
Sbjct: 127 VNRPTSSSMSSTVESFSGPR---PTTMKPATTKRYPRTPPVVPEDCHSDCDSSSSVIDDD 186

Query: 71  EEYAQTP-SIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTL 110
           ++ A +    +    FDLN PP      D+    DDL  T L
Sbjct: 187 DDIASSSRRRNPPFQFDLNFPP--LDCVDLFNGADDLHCTDL 223

[Close]

BLAST of Cp4.1LG04g02650 vs. Swiss-Prot
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.1e-13
Identity = 51/111 (45.95%), Postives = 66/111 (59.46%), Query Frame = 1


Query: 11  VKRPTSSSLSSTVESFSGPR---VSIPATSVPK-----LRRKSLPPVSPDDCHSDCDSSS 70
           + RP SSS+SSTV+S SGPR    +  ++SV K      R    PPV+P+DCHSDCDSSS
Sbjct: 136 ISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAIKRYPRTPPVAPEDCHSDCDSSS 195

Query: 71  SVVEDSEEYAQTPSIHKV-LPFDLNLPPPLQSLQDIDISG---DDLQVTTL 110
           SV++D ++ A + S  K    FDLN PP    L  +D+     DDL  T L
Sbjct: 196 SVIDDGDDIASSSSRRKTPFQFDLNFPP----LDGVDLFAGGIDDLHCTDL 242

[Close]

BLAST of Cp4.1LG04g02650 vs. TrEMBL
Match: A0A0A0KHW7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G421660 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.4e-36
Identity = 81/102 (79.41%), Postives = 88/102 (86.27%), Query Frame = 1


Query: 10  PVKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSE 69
           PV RPTSSSLSSTVESFSGPR+SIPA SVPKLRRKSLP V+PDDCHSDCDSSSSVV+DSE
Sbjct: 113 PVNRPTSSSLSSTVESFSGPRLSIPAPSVPKLRRKSLPQVAPDDCHSDCDSSSSVVDDSE 172

Query: 70  EYAQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 112
           EYA + SI +VLPFDLNLPPPL    D+D+SGDDL  T L F
Sbjct: 173 EYAHSSSIRRVLPFDLNLPPPLPPPHDVDLSGDDLHATALYF 214

[Close]

BLAST of Cp4.1LG04g02650 vs. TrEMBL
Match: A0A0A0KBH0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G167230 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-24
Identity = 65/108 (60.19%), Postives = 78/108 (72.22%), Query Frame = 1


Query: 3   GTMISNSPVKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSS 62
           G  I      RPTSSSLSSTVESFSGPR+S P +S+  +RR+ + PVSPDDCHSDCDSSS
Sbjct: 115 GAKIECVQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSS 174

Query: 63  SVVEDSEEYAQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLC 111
           SVV+D +E     S  + LPFDLNLPPP+     +D++GDDLQ T LC
Sbjct: 175 SVVDD-DEVCVLASFRRALPFDLNLPPPMDV---VDLTGDDLQATALC 218

[Close]

BLAST of Cp4.1LG04g02650 vs. TrEMBL
Match: A0A0H3Y7W7_9ROSA (Transcription factor ERF12 OS=Eriobotrya japonica GN=ERF12 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.9e-20
Identity = 62/103 (60.19%), Postives = 75/103 (72.82%), Query Frame = 1


Query: 13  RPTSSSLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYA 72
           RPTSSSLSSTVESFSGPR     TS P+ +R+++ PVSP+DCHSDCDSSSSVV+D ++  
Sbjct: 124 RPTSSSLSSTVESFSGPRPRPRPTSDPQPQRRAVLPVSPEDCHSDCDSSSSVVDDGDDCV 183

Query: 73  QTPSIHKV--LPFDLNLPPPLQSLQDIDISGD---DLQVTTLC 111
              S  ++  LPFDLNLPPP+  L D+  SGD   DLQ T LC
Sbjct: 184 LMSSFRRISPLPFDLNLPPPMDGL-DLFKSGDDDHDLQATALC 225

[Close]

BLAST of Cp4.1LG04g02650 vs. TrEMBL
Match: D5L121_MALDO (AP2 domain class transcription factor OS=Malus domestica GN=AP2D37 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.2e-20
Identity = 62/103 (60.19%), Postives = 74/103 (71.84%), Query Frame = 1


Query: 13  RPTSSSLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYA 72
           RPTSSSLSSTVESFSGPR     TS P+ +R+ + PVSP+DCHSDCDSSSSVV+D ++  
Sbjct: 125 RPTSSSLSSTVESFSGPRPRPRPTSDPQPQRRPVLPVSPEDCHSDCDSSSSVVDDGDDCV 184

Query: 73  QTPSIHKV--LPFDLNLPPPLQSLQDIDISGD---DLQVTTLC 111
              S  ++  LPFDLNLPPP+  L D+  SGD   DLQ T LC
Sbjct: 185 LMSSFRRISPLPFDLNLPPPMDGL-DLFKSGDDDYDLQATALC 226

[Close]

BLAST of Cp4.1LG04g02650 vs. TrEMBL
Match: M5WTV1_PRUPE (Ethylene responsive factor 3 OS=Prunus persica GN=PRUPE_ppa010804mg PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-19
Identity = 62/107 (57.94%), Postives = 73/107 (68.22%), Query Frame = 1


Query: 13  RPTSSSLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYA 72
           RPTSSSLSSTVESFSGPR     TS  +L+R+ + PV PDDCHSDCDSSSSVV+D ++  
Sbjct: 128 RPTSSSLSSTVESFSGPRPQPRPTSDAQLQRRPVHPVPPDDCHSDCDSSSSVVDDGDDCV 187

Query: 73  QTPSIHKV--LPFDLNLPPP-----LQSLQDIDISGD--DLQVTTLC 111
            T S  +V  LPFDLNLPPP     L   +  ++ GD  DLQ T LC
Sbjct: 188 LTSSFRRVSPLPFDLNLPPPQMMDGLDLFKSGEVCGDDHDLQATALC 234

[Close]

BLAST of Cp4.1LG04g02650 vs. TAIR10
Match: AT1G50640.1 (AT1G50640.1 ethylene responsive element binding factor 3)

HSP 1 Score: 79.7 bits (195), Expect = 1.2e-15
Identity = 51/102 (50.00%), Postives = 62/102 (60.78%), Query Frame = 1


Query: 11  VKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRK--SLPPVSPDDCHSDCDSSSSVVEDS 70
           V RPTSSS+SSTVESFSGPR   P T  P   ++    PPV P+DCHSDCDSSSSV++D 
Sbjct: 127 VNRPTSSSMSSTVESFSGPR---PTTMKPATTKRYPRTPPVVPEDCHSDCDSSSSVIDDD 186

Query: 71  EEYAQTP-SIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTL 110
           ++ A +    +    FDLN PP      D+    DDL  T L
Sbjct: 187 DDIASSSRRRNPPFQFDLNFPP--LDCVDLFNGADDLHCTDL 223

[Close]

BLAST of Cp4.1LG04g02650 vs. TAIR10
Match: AT3G20310.1 (AT3G20310.1 ethylene response factor 7)

HSP 1 Score: 75.5 bits (184), Expect = 2.3e-14
Identity = 51/111 (45.95%), Postives = 66/111 (59.46%), Query Frame = 1


Query: 11  VKRPTSSSLSSTVESFSGPR---VSIPATSVPK-----LRRKSLPPVSPDDCHSDCDSSS 70
           + RP SSS+SSTV+S SGPR    +  ++SV K      R    PPV+P+DCHSDCDSSS
Sbjct: 136 ISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAIKRYPRTPPVAPEDCHSDCDSSS 195

Query: 71  SVVEDSEEYAQTPSIHKV-LPFDLNLPPPLQSLQDIDISG---DDLQVTTL 110
           SV++D ++ A + S  K    FDLN PP    L  +D+     DDL  T L
Sbjct: 196 SVIDDGDDIASSSSRRKTPFQFDLNFPP----LDGVDLFAGGIDDLHCTDL 242

[Close]

BLAST of Cp4.1LG04g02650 vs. NCBI nr
Match: gi|659097186|ref|XP_008449487.1| (PREDICTED: ethylene-responsive transcription factor 3-like [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 7.0e-37
Identity = 81/102 (79.41%), Postives = 88/102 (86.27%), Query Frame = 1


Query: 10  PVKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSE 69
           PV RPTSSSLSSTVESFSGPR+SIP  SVPKLRRKS P V+PDDCHSDCDSSSSVV+DSE
Sbjct: 113 PVNRPTSSSLSSTVESFSGPRLSIPVPSVPKLRRKSQPQVAPDDCHSDCDSSSSVVDDSE 172

Query: 70  EYAQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 112
           EYAQ+ SI +VLPFDLNLPPPL    D+D+SGDDL  T LCF
Sbjct: 173 EYAQSSSIRRVLPFDLNLPPPLPPPHDVDLSGDDLHATALCF 214

[Close]

BLAST of Cp4.1LG04g02650 vs. NCBI nr
Match: gi|449444731|ref|XP_004140127.1| (PREDICTED: ethylene-responsive transcription factor 3-like [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 3.5e-36
Identity = 81/102 (79.41%), Postives = 88/102 (86.27%), Query Frame = 1


Query: 10  PVKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSE 69
           PV RPTSSSLSSTVESFSGPR+SIPA SVPKLRRKSLP V+PDDCHSDCDSSSSVV+DSE
Sbjct: 113 PVNRPTSSSLSSTVESFSGPRLSIPAPSVPKLRRKSLPQVAPDDCHSDCDSSSSVVDDSE 172

Query: 70  EYAQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 112
           EYA + SI +VLPFDLNLPPPL    D+D+SGDDL  T L F
Sbjct: 173 EYAHSSSIRRVLPFDLNLPPPLPPPHDVDLSGDDLHATALYF 214

[Close]

BLAST of Cp4.1LG04g02650 vs. NCBI nr
Match: gi|449450890|ref|XP_004143195.1| (PREDICTED: ethylene-responsive transcription factor 3-like [Cucumis sativus])

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-24
Identity = 65/108 (60.19%), Postives = 78/108 (72.22%), Query Frame = 1


Query: 3   GTMISNSPVKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSS 62
           G  I      RPTSSSLSSTVESFSGPR+S P +S+  +RR+ + PVSPDDCHSDCDSSS
Sbjct: 115 GAKIECVQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSS 174

Query: 63  SVVEDSEEYAQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLC 111
           SVV+D +E     S  + LPFDLNLPPP+     +D++GDDLQ T LC
Sbjct: 175 SVVDD-DEVCVLASFRRALPFDLNLPPPMDV---VDLTGDDLQATALC 218

[Close]

BLAST of Cp4.1LG04g02650 vs. NCBI nr
Match: gi|729347018|ref|XP_010542116.1| (PREDICTED: ethylene-responsive transcription factor 3-like, partial [Tarenaya hassleriana])

HSP 1 Score: 119.8 bits (299), Expect = 3.1e-24
Identity = 67/108 (62.04%), Postives = 79/108 (73.15%), Query Frame = 1


Query: 3   GTMISNSPVKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSS 62
           GT   +SPV RP SSS+SSTVESFSGPRVS P + V   R+K + P  PDDC SDCDSSS
Sbjct: 108 GTGFGSSPVNRPASSSMSSTVESFSGPRVSRPGSEVVVHRKKPVQPRPPDDCRSDCDSSS 167

Query: 63  SVVEDSEEYAQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLC 111
           SVV+D ++   T S  KVLPFDLNLPPP   ++D D SG+DL+VT LC
Sbjct: 168 SVVDDDDDCVLTSSFRKVLPFDLNLPPP---MEDHD-SGEDLKVTALC 211

[Close]

BLAST of Cp4.1LG04g02650 vs. NCBI nr
Match: gi|729419521|ref|XP_010557690.1| (PREDICTED: ethylene-responsive transcription factor 3-like [Tarenaya hassleriana])

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-23
Identity = 64/105 (60.95%), Postives = 79/105 (75.24%), Query Frame = 1


Query: 6   ISNSPVKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVV 65
           I +SP+ RP SSS+SST+ESFSGPRVS P   V   R+K + P +PDDCHSDCDSSSSVV
Sbjct: 121 IGSSPMNRPASSSMSSTLESFSGPRVSRPRPVVVH-RKKPVQPRAPDDCHSDCDSSSSVV 180

Query: 66  EDSEEYAQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLC 111
           +D ++   T S+ KVLPFDLNLPPP++     D SG+DL+VT LC
Sbjct: 181 DDDDDCVLTSSLRKVLPFDLNLPPPMEG---HDFSGEDLKVTALC 221

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g02650 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF3_TOBAC	3.1e-16	51.33	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=...	[more]
ERF82_ARATH	2.2e-14	50.00	Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 ...	[more]
ERF83_ARATH	4.1e-13	45.95	Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 ...	[more]

BLAST of Cp4.1LG04g02650 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHW7_CUCSA	2.4e-36	79.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G421660 PE=4 SV=1	[more]
A0A0A0KBH0_CUCSA	1.2e-24	60.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G167230 PE=4 SV=1	[more]
A0A0H3Y7W7_9ROSA	1.9e-20	60.19	Transcription factor ERF12 OS=Eriobotrya japonica GN=ERF12 PE=2 SV=1	[more]
D5L121_MALDO	3.2e-20	60.19	AP2 domain class transcription factor OS=Malus domestica GN=AP2D37 PE=2 SV=1	[more]
M5WTV1_PRUPE	1.2e-19	57.94	Ethylene responsive factor 3 OS=Prunus persica GN=PRUPE_ppa010804mg PE=2 SV=1	[more]

BLAST of Cp4.1LG04g02650 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50640.1	1.2e-15	50.00	ethylene responsive element binding factor 3	[more]
AT3G20310.1	2.3e-14	45.95	ethylene response factor 7	[more]

BLAST of Cp4.1LG04g02650 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097186\|ref\|XP_008449487.1\|	7.0e-37	79.41	PREDICTED: ethylene-responsive transcription factor 3-like [Cucumis melo]	[more]
gi\|449444731\|ref\|XP_004140127.1\|	3.5e-36	79.41	PREDICTED: ethylene-responsive transcription factor 3-like [Cucumis sativus]	[more]
gi\|449450890\|ref\|XP_004143195.1\|	1.8e-24	60.19	PREDICTED: ethylene-responsive transcription factor 3-like [Cucumis sativus]	[more]
gi\|729347018\|ref\|XP_010542116.1\|	3.1e-24	62.04	PREDICTED: ethylene-responsive transcription factor 3-like, partial [Tarenaya ha...	[more]
gi\|729419521\|ref\|XP_010557690.1\|	1.2e-23	60.95	PREDICTED: ethylene-responsive transcription factor 3-like [Tarenaya hassleriana...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g02650.1	Cp4.1LG04g02650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31677	FAMILY NOT NAMED	coord: 13..89 score: 1.5
None	No IPR available	PANTHER	PTHR31677:SF20	SUBFAMILY NOT NAMED	coord: 13..89 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG04g02650	CmaCh11G019380	Cucurbita maxima (Rimu)	cmacpeB148
Cp4.1LG04g02650	CmoCh11G020180	Cucurbita moschata (Rifu)	cmocpeB126
Cp4.1LG04g02650	ClCG09G020880	Watermelon (Charleston Gray)	cpewcgB582
Cp4.1LG04g02650	MELO3C014441.2	Melon (DHL92) v3.6.1	cpemedB758
Cp4.1LG04g02650	CsaV3_6G037810	Cucumber (Chinese Long) v3	cpecucB0854
Cp4.1LG04g02650	CsaV3_6G015510	Cucumber (Chinese Long) v3	cpecucB0856
Cp4.1LG04g02650	Bhi05G001801	Wax gourd	cpewgoB0854
Cp4.1LG04g02650	CsGy6G021900	Cucumber (Gy14) v2	cgybcpeB838
Cp4.1LG04g02650	Carg15705	Silver-seed gourd	carcpeB0754
Cp4.1LG04g02650	Carg04645	Silver-seed gourd	carcpeB0547
Cp4.1LG04g02650	Carg03460	Silver-seed gourd	carcpeB0474
Cp4.1LG04g02650	Carg13623	Silver-seed gourd	carcpeB0047

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG04g02650	Wax gourd	cpewgoB0865
Cp4.1LG04g02650	Cucurbita pepo (Zucchini)	cpecpeB267
Cp4.1LG04g02650	Cucurbita pepo (Zucchini)	cpecpeB306
Cp4.1LG04g02650	Cucurbita pepo (Zucchini)	cpecpeB492
Cp4.1LG04g02650	Cucumber (Gy14) v1	cgycpeB0511
Cp4.1LG04g02650	Cucurbita maxima (Rimu)	cmacpeB537
Cp4.1LG04g02650	Cucurbita maxima (Rimu)	cmacpeB573
Cp4.1LG04g02650	Cucurbita maxima (Rimu)	cmacpeB642
Cp4.1LG04g02650	Cucurbita moschata (Rifu)	cmocpeB492
Cp4.1LG04g02650	Cucurbita moschata (Rifu)	cmocpeB524
Cp4.1LG04g02650	Cucurbita moschata (Rifu)	cmocpeB592
Cp4.1LG04g02650	Wild cucumber (PI 183967)	cpecpiB687
Cp4.1LG04g02650	Cucumber (Chinese Long) v2	cpecuB683
Cp4.1LG04g02650	Cucumber (Chinese Long) v2	cpecuB685
Cp4.1LG04g02650	Bottle gourd (USVL1VR-Ls)	cpelsiB523
Cp4.1LG04g02650	Bottle gourd (USVL1VR-Ls)	cpelsiB531
Cp4.1LG04g02650	Watermelon (Charleston Gray)	cpewcgB579
Cp4.1LG04g02650	Watermelon (Charleston Gray)	cpewcgB592
Cp4.1LG04g02650	Watermelon (97103) v1	cpewmB633
Cp4.1LG04g02650	Watermelon (97103) v1	cpewmB637
Cp4.1LG04g02650	Watermelon (97103) v1	cpewmB668
Cp4.1LG04g02650	Melon (DHL92) v3.5.1	cpemeB634
Cp4.1LG04g02650	Cucumber (Gy14) v2	cgybcpeB839