Cp4.1LG04g02110 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTGCTTTCCCTGCTTTTCGTCTAAGAGCAAGAAAGGGATCGATAAGAACAACGACAATTCCGCCTCCTTCTCCTCCGGCCACCGTACTCCGCCGCACCCTAAGTCCCCTGGTCTGTTACTTCTCTCTCACCCCCACCCCTCATCCTAAATCCATGCATATTCTTTTCCCTTCAACCAGAAAACAATAGGGAGAAATTTTTTTGCATTAATCTAAATTTCCATGGAAACAACATTCTGGGATTCTCCTAATGTAAAAGTTCCCAACATTGTTATCCAATAACAACGTAGAAAAGGGATAAAAGAGTCATTTCATGTCATATATTTCCATTTCTATTTGAACTAAAGTTTTCTTGTCATTTATAGCACCAGAAGCAATCAAAACAAAGCCCACAGAGGAAGGGAAGGAGAAAGCACATGAAGGTGAAAAAATAGATGCCCAGAACTTCACTTTCCGGGAGCTAGCCACGGCTACAAAGAATTTCCGCCAGGAATGTCTTTTGGGTGAAGGTGGGTTTGGGAAGGTCTTTAAGGCTACCCTTCAACCAAGTGGCCAGGTAACTAACTAAACCAACCAAATTGATTCGTTTACGACACCGTCAATCTAAACATAACTCAATAAAATCTGTATAAAAATGAAGGTGATGGCTGTGAAGCAGCTTGATAGAAATGGTATGCAAGGGAACAAGGACTTCCTTGGTGAGGTTAAGGCATTGAGCCTTCTAAAGCATCCAAATCTTGTGAAGTTCAATGGATATTGTGCAGATGGAGATCAAAGGATTTTGGTGTATGAATATATGCCTGGAGGTTCTTTGGACGATTGTCTCTTCGGTATATTTTCTATCCCTAATGTGCCTTCTTCTTCTAAGATAGTGTGAGAAATAGAATCTAATATATTCATATATGTCATCAAACTATGATTCAATATTGGCAGACATAAAAGAAGATAGAAAGCCAATGGATTGGTTTGCTCGTATAAAAATAGCATTAGGAGTTGCAAAAGGATTGGAATACCTGCATGACCAGACGGATCCTCCCATAATATTTCGTGATTTGAAGTCATCAAACATCTTGCTCGATGAAGATTTCAGCCCAAAGCTTTCTGATTTTGGACTCGCAAATCTCAGCGGCGGCGGCGGCGACAAGTCTCCGTTGCCGTCAAGGGTCATGGGCACCTATGGCTACTCTGCTCCTGAGTATACAAGAGGTGGTCAACTCACCGCCAAGTCTGATATATACAGCTTTGGAGTTGTGATGCTTGAACTCATCACTGGAAGAAAAGCTGTCGACACTACAAAACCAAATAACGAGCAGAATCTTGTTGCTTGGGTATGTTATGCTTTTCAATAGCATTTCGTTTTCTGTTTCTAAAAAAATTAAGTTTCCCGCTAATTTCATTGTCTACCGTCCAAAAACATTTTTAAAATGTAAGCTAGATTTGAAAACTCCAATGGATGTGTAACAGGCACAACCATTTTTCCGAGATCCAAAGAGATTTCCAGACCTGGCCGATCCTCTCCTAGGACGGTTGTTCCCGGAGAAAGATCTGAATCAGGCCGTCGCCGTCGCTGCCATGTGTCTGCAAGAGGAAGCAGAAGTCCGTCCTCTGATCGCAGACGTCATGATTGCCCTCAGCTTCCTATCCACAACTCCGGATGAGAACCTCCGTCCGCTCCCTTACCCGCCGGAGCCTGAGGACGAGGAGGACGACGACGAGGACTACTCCTCTTCAGACTGTTCAGATTCCGATACCGAATCTCGAAACATCGGAAAAGACGGCGCATCTGGAAACTTCACAAGTGCAAGAAACCACGAAACAGACATCTCAGATGACGAAGAAGAAGACATCAGTCCAAGAACTCAGAAACCTAAAAAGAAAAAGAAAAACAAAGAATCTGATCAAAAACGAGTCGGATTCAAAGACGACGTACAACCACCGCCAAATCACTCCCGAAAGAACAGCTCCTCATCGAGCGATGGAGGCTCTTCAGCTAGAAGCAGCAACGCATCGGAAAATGAAAATAACAGAGATTCATCGAATAATGTAAATAGAAGTGATTCTACATTAGATCATAAACAAGAGTAGAGGATCGCATTCTGGCGATGAAGCTCGACACTACGGCAGCGATTCCGACGGCGGCGAAGATTGAGACGTTTGTGGGAGG ATGAGTTGCTTTCCCTGCTTTTCGTCTAAGAGCAAGAAAGGGATCGATAAGAACAACGACAATTCCGCCTCCTTCTCCTCCGGCCACCGTACTCCGCCGCACCCTAAGTCCCCTGCACCAGAAGCAATCAAAACAAAGCCCACAGAGGAAGGGAAGGAGAAAGCACATGAAGGTGAAAAAATAGATGCCCAGAACTTCACTTTCCGGGAGCTAGCCACGGCTACAAAGAATTTCCGCCAGGAATGTCTTTTGGGTGAAGGTGGGTTTGGGAAGGTCTTTAAGGCTACCCTTCAACCAAGTGGCCAGGCACAACCATTTTTCCGAGATCCAAAGAGATTTCCAGACCTGGCCGATCCTCTCCTAGGACGGTTGTTCCCGGAGAAAGATCTGAATCAGGCCGTCGCCGTCGCTGCCATGTGTCTGCAAGAGGAAGCAGAAGTCCGTCCTCTGATCGCAGACGTCATGATTGCCCTCAGCTTCCTATCCACAACTCCGGATGAGAACCTCCGTCCGCTCCCTTACCCGCCGGAGCCTGAGGACGAGGAGGACGACGACGAGGACTACTCCTCTTCAGACTGTTCAGATTCCGATACCGAATCTCGAAACATCGGAAAAGACGGCGCATCTGGAAACTTCACAAGTGCAAGAAACCACGAAACAGACATCTCAGATGACGAAGAAGAAGACATCAGTCCAAGAACTCAGAAACCTAAAAAGAAAAAGAAAAACAAAGAATCTGATCAAAAACGAGTCGGATTCAAAGACGACGTACAACCACCGCCAAATCACTCCCGAAAGAACAGCTCCTCATCGAGCGATGGAGGCTCTTCAGCTAGAAGCAGCAACGCATCGGAAAATGAAAATAACAGAGATTCATCGAATAATGTAAATAGAAGTGATTCTACATTAGATCATAAACAAGAGTAGAGGATCGCATTCTGGCGATGAAGCTCGACACTACGGCAGCGATTCCGACGGCGGCGAAGATTGAGACGTTTGTGGGAGG ATGAGTTGCTTTCCCTGCTTTTCGTCTAAGAGCAAGAAAGGGATCGATAAGAACAACGACAATTCCGCCTCCTTCTCCTCCGGCCACCGTACTCCGCCGCACCCTAAGTCCCCTGCACCAGAAGCAATCAAAACAAAGCCCACAGAGGAAGGGAAGGAGAAAGCACATGAAGGTGAAAAAATAGATGCCCAGAACTTCACTTTCCGGGAGCTAGCCACGGCTACAAAGAATTTCCGCCAGGAATGTCTTTTGGGTGAAGGTGGGTTTGGGAAGGTCTTTAAGGCTACCCTTCAACCAAGTGGCCAGGCACAACCATTTTTCCGAGATCCAAAGAGATTTCCAGACCTGGCCGATCCTCTCCTAGGACGGTTGTTCCCGGAGAAAGATCTGAATCAGGCCGTCGCCGTCGCTGCCATGTGTCTGCAAGAGGAAGCAGAAGTCCGTCCTCTGATCGCAGACGTCATGATTGCCCTCAGCTTCCTATCCACAACTCCGGATGAGAACCTCCGTCCGCTCCCTTACCCGCCGGAGCCTGAGGACGAGGAGGACGACGACGAGGACTACTCCTCTTCAGACTGTTCAGATTCCGATACCGAATCTCGAAACATCGGAAAAGACGGCGCATCTGGAAACTTCACAAGTGCAAGAAACCACGAAACAGACATCTCAGATGACGAAGAAGAAGACATCAGTCCAAGAACTCAGAAACCTAAAAAGAAAAAGAAAAACAAAGAATCTGATCAAAAACGAGTCGGATTCAAAGACGACGTACAACCACCGCCAAATCACTCCCGAAAGAACAGCTCCTCATCGAGCGATGGAGGCTCTTCAGCTAGAAGCAGCAACGCATCGGAAAATGAAAATAACAGAGATTCATCGAATAATGTAAATAGAAGTGATTCTACATTAGATCATAAACAAGAGTAG MSCFPCFSSKSKKGIDKNNDNSASFSSGHRTPPHPKSPAPEAIKTKPTEEGKEKAHEGEKIDAQNFTFRELATATKNFRQECLLGEGGFGKVFKATLQPSGQAQPFFRDPKRFPDLADPLLGRLFPEKDLNQAVAVAAMCLQEEAEVRPLIADVMIALSFLSTTPDENLRPLPYPPEPEDEEDDDEDYSSSDCSDSDTESRNIGKDGASGNFTSARNHETDISDDEEEDISPRTQKPKKKKKNKESDQKRVGFKDDVQPPPNHSRKNSSSSSDGGSSARSSNASENENNRDSSNNVNRSDSTLDHKQE
BLAST of Cp4.1LG04g02110 vs. Swiss-Prot
Match: Y3707_ARATH (Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 9.1e-18 Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. Swiss-Prot
Match: LIPG1_ARATH (Receptor-like kinase LIP1 OS=Arabidopsis thaliana GN=LIP1 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.6e-14 Identity = 66/184 (35.87%), Postives = 107/184 (58.15%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. Swiss-Prot
Match: LIPG2_ARATH (Receptor-like kinase LIP2 OS=Arabidopsis thaliana GN=LIP2 PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 6.1e-14 Identity = 47/102 (46.08%), Postives = 58/102 (56.86%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. Swiss-Prot
Match: CDL1_ARATH (Serine/threonine-protein kinase CDL1 OS=Arabidopsis thaliana GN=CDL1 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.8e-11 Identity = 35/73 (47.95%), Postives = 52/73 (71.23%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 7.7e-09 Identity = 34/88 (38.64%), Postives = 57/88 (64.77%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. TrEMBL
Match: A0A0A0LY64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662820 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 1.4e-62 Identity = 164/230 (71.30%), Postives = 177/230 (76.96%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. TrEMBL
Match: A0A103Y794_CYNCS (Protein kinase-like domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_017879 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 8.0e-21 Identity = 86/229 (37.55%), Postives = 119/229 (51.97%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. TrEMBL
Match: W9SA67_9ROSA (Serine/threonine-protein kinase OS=Morus notabilis GN=L484_006459 PE=3 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 6.8e-20 Identity = 90/215 (41.86%), Postives = 123/215 (57.21%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. TrEMBL
Match: B9RFT5_RICCO (Receptor serine-threonine protein kinase, putative OS=Ricinus communis GN=RCOM_1437210 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.7e-18 Identity = 84/192 (43.75%), Postives = 104/192 (54.17%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. TrEMBL
Match: A0A022RLF2_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a004273mg PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.8e-18 Identity = 54/104 (51.92%), Postives = 66/104 (63.46%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. TAIR10
Match: AT4G13190.1 (AT4G13190.1 Protein kinase superfamily protein) HSP 1 Score: 92.8 bits (229), Expect = 3.9e-19 Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. TAIR10
Match: AT3G07070.1 (AT3G07070.1 Protein kinase superfamily protein) HSP 1 Score: 92.4 bits (228), Expect = 5.1e-19 Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. TAIR10
Match: AT5G16500.1 (AT5G16500.1 Protein kinase superfamily protein) HSP 1 Score: 81.6 bits (200), Expect = 9.0e-16 Identity = 66/184 (35.87%), Postives = 107/184 (58.15%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. TAIR10
Match: AT3G02810.1 (AT3G02810.1 Protein kinase superfamily protein) HSP 1 Score: 79.7 bits (195), Expect = 3.4e-15 Identity = 47/102 (46.08%), Postives = 58/102 (56.86%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. TAIR10
Match: AT3G24790.1 (AT3G24790.1 Protein kinase superfamily protein) HSP 1 Score: 79.7 bits (195), Expect = 3.4e-15 Identity = 43/79 (54.43%), Postives = 55/79 (69.62%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. NCBI nr
Match: gi|778664208|ref|XP_004142598.2| (PREDICTED: serine/threonine-protein kinase At3g07070-like [Cucumis sativus]) HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62 Identity = 164/230 (71.30%), Postives = 177/230 (76.96%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. NCBI nr
Match: gi|659086068|ref|XP_008443748.1| (PREDICTED: serine/threonine-protein kinase At3g07070-like isoform X1 [Cucumis melo]) HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46 Identity = 115/147 (78.23%), Postives = 122/147 (82.99%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. NCBI nr
Match: gi|659086070|ref|XP_008443749.1| (PREDICTED: serine/threonine-protein kinase At3g07070-like isoform X2 [Cucumis melo]) HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46 Identity = 115/147 (78.23%), Postives = 122/147 (82.99%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. NCBI nr
Match: gi|976918648|gb|KVI03817.1| (Protein kinase-like domain-containing protein [Cynara cardunculus var. scolymus]) HSP 1 Score: 109.4 bits (272), Expect = 1.1e-20 Identity = 86/229 (37.55%), Postives = 119/229 (51.97%), Query Frame = 1
BLAST of Cp4.1LG04g02110 vs. NCBI nr
Match: gi|703148310|ref|XP_010109313.1| (Serine/threonine-protein kinase [Morus notabilis]) HSP 1 Score: 106.3 bits (264), Expect = 9.7e-20 Identity = 90/215 (41.86%), Postives = 123/215 (57.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|