Cp4.1LG04g01960 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAATATTATTTCAATGCTTATCTTTTTGTTTTGGTCAAAGGATTAAAGGTGTCTTTTGTGGAGTCATTTTCCATTATGAGTGGTCGGTTGGTTTCTTTGACTTCGTGGGGTTTAAAGATTGCTTTGTCTTTTGGTTGTCTTCTCAAAAATTCTGTGTTCTTCTTTGTTCTACAATTCAGATTGCTTGAATCTCTTCAATCCTTGCTTGTTTCAGTAAGTTTGTGGCGATTTCTAATCATATTTCTGTTCTTTTTGCTTGTTTCTTATGTGTTTGTTCGATTATATCATGTCGATTGCTCGACCGTAGTTTGGCTATCGTACGTGGAGCTGAATTAAGCTTTTTCGGTGTTCTTCGTTGAAAAACGCGTAGTTTGGAATGTTGTGTCTTGGATCTTAAATGTTGAAAAGATTCATTTTGATGTTTGTTCATGGATGGAAGTGTTAAATTTAGCTGATCATCTTATGCAGCAGCAGCATCATGGGGAGGGAGCCACGTGCTGTACGAGTTGAGCAGAACCCGAACGGTGTTGGTCGTGACATAGTTTATGTTGCGCCGAGAGTTGCACAAAGAAACATTGAGGCTAAGGAGTATGAAGTGAAGAAATGTACTGAAGAAAACTTGATCATTGAGAAATATCATGAGAAGCAAGAAGTTTTGAGTGTTAAAAGTACGAATCTTGATGTGGAGGAGAAATATGAGAAGCTTGGAGAGTATAAGAAGTCAAGCCCGATTGGATCGAAATCTCCGGGAAGTATGCGAGGGCAGTACACTGTTCCTCAGCCGTTTACGTTGGAAACGGAGAAGCGCGGTCCGTGTACACATAGTAACGGGAATGATGCAACTACTACTGCTGGTGTCAACATTTCGCCAAATTTGCATTGTCCTAGTGCTAAGAAGAACTCTCAGGTACGATATTGTGTTTGAAATATGTACGTGTTTGTGAGATCCTGCATTGGTTGGAGAGGGGAACAAAACGTTCCTTATATGGGTGTGGTAGACGTGTTTTAAAACCGTGAGGCTGACGGTGTACGTAACGAGCCAAAACGAGCAATATCTACTAACGGTGGGCTAGAGCTGTTACAAATGATATCAGAGCCAAACATCGGGCGGTGGGGCAGTGTCCCAAGGAGGTGGATATAAGATCCCACATCGGTTGGAGGGTGGAACAAAACATTTCTTATATGGGTGTGGAAATCTCTCCCTAGTAGACGTGGTTTAAAACCGTGAGGCTAATGACGATACGTAACGGGTCAAAGCAGACAATATCTACTAGCGGTAGGCTTGAGCTGTTACCGTTTTCCTAGGCTGACCCCTAAAATATGGCCAAGCTTTTTGTTGGGTTTAAGGTGGACAGATTTTGGAGAGTAGTTTTGGGAGAGCTCGAGACATTCGATGTCGGGATCTTGTAGTTTTATTTCTCGTATCGATATCGTTTTTGGTTAATTTCCATCTTAACTATGGTGGTTTCTTTCCTAATTCTGTACTATTTTCTGTCATTGGATAAACCTTGCCCGTTTCTTGTACCACGTCTTTCTTGAGAGGCCTCGACTCTCCGAAACATACCGTTCGGGCTATACCCTACAGCCCCTAACTTACTCAATTTATAAGGGTTTTTTGTGAGAGTGAAGTTAGATTTAGCAGTAATGATTAATGCTTGAACTTTTCTGGTTTGTTTACAGCCGAGTTCGCCTCTTTCGTTAAGGAAGCATGTAAAGTACCACGACGAAGAAGATAATTGGTCCATCACTTCCTCGTATCCTTTTCGACGTCGAAATGTTTTTACGTTTAGTAGTTAAATCGTGTCACGTAAGTTTGTGTCACGTAAGTTTTTGGCTTTTATGATCCTTAGCCATGTAAAGTACTGCTACTTCTGTGAAATCTAAGGTAACTGTTGGCGTGGCTCCGACTTTCCGTTCAGCTGGTCGTGCCGAGAGAAGGAAGGAGGTAACTTAATTGGTGTCGTGTATTATTGGAAATGTTGTTGGCATTATACGCATCGTTATACCGAATTTGTCGTAATTTTGCAGTTTTATAATAAGTTGGAGGAGAAACACCAAGCTTTGCAGGCTGAGAAAAGCCAATATGAAGCTAGAACAAAGGTATCTTTCTTTTCTTCTTCTTTTTTTATGGGAACTATTAATTTAAAAGGGAAAGCAAAGAGGACAATATTTGCTAGCGGTGGACTTGGGCTGTTACAAATGGTATCAGAGCTAGGTTACCGGGCGGTGTGCCAGCGAGGACGCTGGGCTCCGAAGGGGAGTGGATTATAAGATCCCACATCGATTGGAGAGAGGAACGAGTACCAGCGAGGATGTTGGGCCCCAAAGGGGGATGAATTATAAGATCCTACATCGATTGGAGAGAGGAACGAGTGCCAGCAAGGATGCTGGGCCTCGAAGAGGGATGGATTATGAGATCCCACATCGATTGGAGGGAGGAATGAGCGCCAGTGAGGATGTTGGGCCCCGAAGGGGGATGGATTATGAGATCTCACATCGATTGGAGAGAGGAACGAGTGCTAGCAAGAACACTGGGTCTCAAAGGGGGGTGGATTATGACATCCCACATCGGTTAGGGAGGGGGACGAAGCATACTTTGTCCTTCTCCCCAGAAGACGCATTTTAAAAACCTTGAGGGGAAGCTTGAAAGGGAAATCCCAAAGAGGACAATATTTGCTAGTGGTGGGCTTGGACGGTTACAAATGTTATAAGAGCCAGGTTATCGGGCGGTGTGCTAGCGAGGACGTTGAGCCCTGAAGGGGGGTGGACACCGCGCAGTGTGCCAGCGAGGACGCTGGCCCCAAAGGGGAGTGGATTGTGAGTTCCCACATCAGTTGGGGAGGAGAACAAAGCATTCTTTACAAGGGTGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAAACCTTGAGGGGAAATCCGAAAGGAAAAGCTCAAAGAGGACAATATCTGGTAACGTTGGGCTTGGACTGTTACAAATGGTATCAGAGCCAGGTTACCGGGTAGTGTGCCAGCAAGGATGCTCAGTCTTGAAGGGGGGTGGACACCGGGCGTTGTGCCAGCAAGGACGCTGGGTCCCGAAAGGGAGTGGATTGTGAGATCCCACATCAGTTGGGGAGGAGAATGAAACATTCTTTACAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAAACCTTGAGGGGAAACCCGAAAGGAAAAGCTCAAAGAGGACAATATCTGCTAACGGTGGACTTGAACGGTTACATATTTACTCTTTTACATATATCCTCGACCATTTTCTCTGTTTTGCTTCGACTTATGATTGATAACTGATACGATTTCATAGGAAGAGCAAGAAGCAGCCATCAAGCAGCTGAGGAAGAGCTTAATCATCAAAGCAAACCCAGTCCCTACTTTCTACTATGAAGGACCTCCACCCAAAGTTGAACTCAAGAAGGTGAGAGTTACAGAATCAATATCATCAACTCCCCTGCACTTCTTTCTGTAACAATTCATACGCCTTTAACGTTCTCGTGTTCTCGTGTTGCAGCTTCCACTGACTCGACCCAAGTCGCCAAATTTCACAAGGAGAAGGAGCTGTGGCGACGCAGCAGTTACCTCAAATATAGAGAAGGGCAAAGTATGTGGTCGAGTGAAACGACATAGCCTCGGTAGTATCAGAGCGGAGATGACAACTCCGAAAGCTAAGACGCAGCTAATCAGTGGACGGAATAGCGGTATGAAGGTGAAGGAGAGAGTAAATCAAGAGAAGGAGACAACAAAAACAAGTGGTGCTAAGATTCCTGAGCAGAGAAACAATTTGGACATAACAGTTGAGTCATGAACTGAGTTCATCATCTTGTATGTTGCATTGTTGGTGTTTTGTTTTTGAGTTTTAACTGGATTTTGGTAATATGAAATTTGTAAATGTTTTGTAGTTATGATTTGTACTGACAAGATGTGTTCTTACTAGTAGTTGTGCTTAGAGAAAGAGTGTGTTCTTGGTGATCTGGGAATGGTTTTTGAAGATTATGCTCAACATTTGGGGCTGCTACTCTTCTGTTCTGTTGTAGGTAGCATCGGTATCGTTATGTTTCTCGTTCATGAACTAAGACTAATCGTTGGACTCGAACGAATGAAATTGAATGTGAAAGGCCAAAATGAAATGAAAT CGAATATTATTTCAATGCTTATCTTTTTGTTTTGGTCAAAGGATTAAAGGTGTCTTTTGTGGAGTCATTTTCCATTATGAGTGGTCGGTTGGTTTCTTTGACTTCGTGGGGTTTAAAGATTGCTTTGTCTTTTGGTTGTCTTCTCAAAAATTCTGTGTTCTTCTTTGTTCTACAATTCAGATTGCTTGAATCTCTTCAATCCTTGCTTGTTTCACTGATCATCTTATGCAGCAGCAGCATCATGGGGAGGGAGCCACGTGCTGTACGAGTTGAGCAGAACCCGAACGGTGTTGGTCGTGACATAGTTTATGTTGCGCCGAGAGTTGCACAAAGAAACATTGAGGCTAAGGAGTATGAAGTGAAGAAATGTACTGAAGAAAACTTGATCATTGAGAAATATCATGAGAAGCAAGAAGTTTTGAGTGTTAAAAGTACGAATCTTGATGTGGAGGAGAAATATGAGAAGCTTGGAGAGTATAAGAAGTCAAGCCCGATTGGATCGAAATCTCCGGGAAGTATGCGAGGGCAGTACACTGTTCCTCAGCCGTTTACGTTGGAAACGGAGAAGCGCGGTCCGTGTACACATAGTAACGGGAATGATGCAACTACTACTGCTGGTCCGAGTTCGCCTCTTTCGTTAAGGAAGCATGTAAAGTACCACGACGAAGAAGATAATTGGTCCATCACTTCCTCTACTGCTACTTCTGTGAAATCTAAGGTAACTGTTGGCGTGGCTCCGACTTTCCGTTCAGCTGGTCGTGCCGAGAGAAGGAAGGAGTTTTATAATAAGTTGGAGGAGAAACACCAAGCTTTGCAGGCTGAGAAAAGCCAATATGAAGCTAGAACAAAGGAAGAGCAAGAAGCAGCCATCAAGCAGCTGAGGAAGAGCTTAATCATCAAAGCAAACCCAGTCCCTACTTTCTACTATGAAGGACCTCCACCCAAAGTTGAACTCAAGAAGCTTCCACTGACTCGACCCAAGTCGCCAAATTTCACAAGGAGAAGGAGCTGTGGCGACGCAGCAGTTACCTCAAATATAGAGAAGGGCAAAGTATGTGGTCGAGTGAAACGACATAGCCTCGGTAGTATCAGAGCGGAGATGACAACTCCGAAAGCTAAGACGCAGCTAATCAGTGGACGGAATAGCGGTATGAAGGTGAAGGAGAGAGTAAATCAAGAGAAGGAGACAACAAAAACAAGTGGTGCTAAGATTCCTGAGCAGAGAAACAATTTGGACATAACAGTTGAGTCATGAACTGAGTTCATCATCTTGTATGTTGCATTGTTGGTGTTTTGTTTTTGAGTTTTAACTGGATTTTGGTAATATGAAATTTGTAAATGTTTTGTAGTTATGATTTGTACTGACAAGATGTGTTCTTACTAGTAGTTGTGCTTAGAGAAAGAGTGTGTTCTTGGTGATCTGGGAATGGTTTTTGAAGATTATGCTCAACATTTGGGGCTGCTACTCTTCTGTTCTGTTGTAGGTAGCATCGGTATCGTTATGTTTCTCGTTCATGAACTAAGACTAATCGTTGGACTCGAACGAATGAAATTGAATGTGAAAGGCCAAAATGAAATGAAAT ATGAGTGGTCGGTTGGTTTCTTTGACTTCGTGGGGTTTAAAGATTGCTTTGTCTTTTGGTTGTCTTCTCAAAAATTCTGTGTTCTTCTTTGTTCTACAATTCAGATTGCTTGAATCTCTTCAATCCTTGCTTGTTTCACTGATCATCTTATGCAGCAGCAGCATCATGGGGAGGGAGCCACGTGCTGTACGAGTTGAGCAGAACCCGAACGGTGTTGGTCGTGACATAGTTTATGTTGCGCCGAGAGTTGCACAAAGAAACATTGAGGCTAAGGAGTATGAAGTGAAGAAATGTACTGAAGAAAACTTGATCATTGAGAAATATCATGAGAAGCAAGAAGTTTTGAGTGTTAAAAGTACGAATCTTGATGTGGAGGAGAAATATGAGAAGCTTGGAGAGTATAAGAAGTCAAGCCCGATTGGATCGAAATCTCCGGGAAGTATGCGAGGGCAGTACACTGTTCCTCAGCCGTTTACGTTGGAAACGGAGAAGCGCGGTCCGTGTACACATAGTAACGGGAATGATGCAACTACTACTGCTGGTCCGAGTTCGCCTCTTTCGTTAAGGAAGCATGTAAAGTACCACGACGAAGAAGATAATTGGTCCATCACTTCCTCTACTGCTACTTCTGTGAAATCTAAGGTAACTGTTGGCGTGGCTCCGACTTTCCGTTCAGCTGGTCGTGCCGAGAGAAGGAAGGAGTTTTATAATAAGTTGGAGGAGAAACACCAAGCTTTGCAGGCTGAGAAAAGCCAATATGAAGCTAGAACAAAGGAAGAGCAAGAAGCAGCCATCAAGCAGCTGAGGAAGAGCTTAATCATCAAAGCAAACCCAGTCCCTACTTTCTACTATGAAGGACCTCCACCCAAAGTTGAACTCAAGAAGCTTCCACTGACTCGACCCAAGTCGCCAAATTTCACAAGGAGAAGGAGCTGTGGCGACGCAGCAGTTACCTCAAATATAGAGAAGGGCAAAGTATGTGGTCGAGTGAAACGACATAGCCTCGGTAGTATCAGAGCGGAGATGACAACTCCGAAAGCTAAGACGCAGCTAATCAGTGGACGGAATAGCGGTATGAAGGTGAAGGAGAGAGTAAATCAAGAGAAGGAGACAACAAAAACAAGTGGTGCTAAGATTCCTGAGCAGAGAAACAATTTGGACATAACAGTTGAGTCATGA MSGRLVSLTSWGLKIALSFGCLLKNSVFFFVLQFRLLESLQSLLVSLIILCSSSIMGREPRAVRVEQNPNGVGRDIVYVAPRVAQRNIEAKEYEVKKCTEENLIIEKYHEKQEVLSVKSTNLDVEEKYEKLGEYKKSSPIGSKSPGSMRGQYTVPQPFTLETEKRGPCTHSNGNDATTTAGPSSPLSLRKHVKYHDEEDNWSITSSTATSVKSKVTVGVAPTFRSAGRAERRKEFYNKLEEKHQALQAEKSQYEARTKEEQEAAIKQLRKSLIIKANPVPTFYYEGPPPKVELKKLPLTRPKSPNFTRRRSCGDAAVTSNIEKGKVCGRVKRHSLGSIRAEMTTPKAKTQLISGRNSGMKVKERVNQEKETTKTSGAKIPEQRNNLDITVES
BLAST of Cp4.1LG04g01960 vs. Swiss-Prot
Match: WDL2_ARATH (Protein WVD2-like 2 OS=Arabidopsis thaliana GN=WDL2 PE=2 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 6.9e-47 Identity = 129/299 (43.14%), Postives = 172/299 (57.53%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. Swiss-Prot
Match: WDL1_ARATH (Protein WVD2-like 1 OS=Arabidopsis thaliana GN=WDL1 PE=1 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.4e-39 Identity = 124/290 (42.76%), Postives = 163/290 (56.21%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. Swiss-Prot
Match: WDL3_ARATH (Protein WVD2-like 3 OS=Arabidopsis thaliana GN=WDL3 PE=1 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.4e-39 Identity = 115/254 (45.28%), Postives = 146/254 (57.48%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. Swiss-Prot
Match: WVD2_ARATH (Protein WAVE-DAMPENED 2 OS=Arabidopsis thaliana GN=WVD2 PE=2 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.1e-35 Identity = 86/129 (66.67%), Postives = 99/129 (76.74%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. Swiss-Prot
Match: WDL4_ARATH (Protein WVD2-like 4 OS=Arabidopsis thaliana GN=WDL4 PE=1 SV=2) HSP 1 Score: 118.2 bits (295), Expect = 2.0e-25 Identity = 96/232 (41.38%), Postives = 132/232 (56.90%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. TrEMBL
Match: A0A0A0LYB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690210 PE=4 SV=1) HSP 1 Score: 507.7 bits (1306), Expect = 1.3e-140 Identity = 290/379 (76.52%), Postives = 305/379 (80.47%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. TrEMBL
Match: W9RQU0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024558 PE=4 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 9.3e-83 Identity = 201/374 (53.74%), Postives = 255/374 (68.18%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. TrEMBL
Match: A0A061F2W8_THECC (TPX2 family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_026311 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 4.5e-77 Identity = 195/364 (53.57%), Postives = 235/364 (64.56%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. TrEMBL
Match: A0A059B6C1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04316 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 5.0e-76 Identity = 191/387 (49.35%), Postives = 245/387 (63.31%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. TrEMBL
Match: D7TXI7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0081g00480 PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 7.2e-75 Identity = 195/389 (50.13%), Postives = 244/389 (62.72%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. TAIR10
Match: AT1G54460.1 (AT1G54460.1 TPX2 (targeting protein for Xklp2) protein family) HSP 1 Score: 189.5 bits (480), Expect = 3.9e-48 Identity = 129/299 (43.14%), Postives = 172/299 (57.53%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. TAIR10
Match: AT3G23090.1 (AT3G23090.1 TPX2 (targeting protein for Xklp2) protein family) HSP 1 Score: 164.5 bits (415), Expect = 1.3e-40 Identity = 115/254 (45.28%), Postives = 146/254 (57.48%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. TAIR10
Match: AT3G04630.1 (AT3G04630.1 WVD2-like 1) HSP 1 Score: 156.4 bits (394), Expect = 3.7e-38 Identity = 97/179 (54.19%), Postives = 124/179 (69.27%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. TAIR10
Match: AT5G28646.1 (AT5G28646.1 TPX2 (targeting protein for Xklp2) protein family) HSP 1 Score: 151.4 bits (381), Expect = 1.2e-36 Identity = 86/129 (66.67%), Postives = 99/129 (76.74%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. TAIR10
Match: AT2G35880.1 (AT2G35880.1 TPX2 (targeting protein for Xklp2) protein family) HSP 1 Score: 118.2 bits (295), Expect = 1.1e-26 Identity = 96/232 (41.38%), Postives = 132/232 (56.90%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. NCBI nr
Match: gi|778664348|ref|XP_011660277.1| (PREDICTED: protein WVD2-like 1 [Cucumis sativus]) HSP 1 Score: 507.7 bits (1306), Expect = 1.8e-140 Identity = 290/379 (76.52%), Postives = 305/379 (80.47%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. NCBI nr
Match: gi|659125481|ref|XP_008462704.1| (PREDICTED: protein WVD2-like 1 [Cucumis melo]) HSP 1 Score: 501.5 bits (1290), Expect = 1.3e-138 Identity = 286/379 (75.46%), Postives = 304/379 (80.21%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. NCBI nr
Match: gi|1009117661|ref|XP_015875437.1| (PREDICTED: protein WVD2-like 1 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 344.0 bits (881), Expect = 3.5e-91 Identity = 220/387 (56.85%), Postives = 265/387 (68.48%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. NCBI nr
Match: gi|1009117665|ref|XP_015875439.1| (PREDICTED: protein WVD2-like 1 isoform X3 [Ziziphus jujuba]) HSP 1 Score: 340.9 bits (873), Expect = 3.0e-90 Identity = 218/380 (57.37%), Postives = 261/380 (68.68%), Query Frame = 1
BLAST of Cp4.1LG04g01960 vs. NCBI nr
Match: gi|1009117663|ref|XP_015875438.1| (PREDICTED: protein WVD2-like 1 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 340.1 bits (871), Expect = 5.1e-90 Identity = 216/380 (56.84%), Postives = 260/380 (68.42%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|