Cp4.1LG04g00820 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g00820
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Unknown protein
Location	Cp4.1LG04 : 1168445 .. 1169857 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATGGGTGCAATCTTTGGAATTACTCTCATTTTGCTTCTTATGGTATGAATTTTTGCATCATTTTTTTTTTATTCGAGTCTTTTAAGAGTTCGTTCTTTAACTTACGAGAATTTTTCTAAAGTTTTGAAAATAAACTATGGAACCCGAATCTAATAAAGTGTAATAATCTTTTCCTTTTTGTTTTTTTCTTGTTATGATGGTCATTAGTTTGTCAACAACATAGAGTCGAGACATGAACCAGGAGAACGCTTGAGTAATGTGGAAGGGAAAGAAGATAGCGTTGAAGGCAAGCAACCTGAAAATGAAAAACGGTTTGTCAAGGATATAGAACCAAGACCCAGTGCTACCTTTTATCCAAAAGAGGCTGAAAAGAAATCATTTTTTAAAGACATTGAGCCACGACCAAGTGCCACATTTTACCCAAATGAAAATGTCAATGTCATACTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACGTTTTACCCAAATGACAATATCAAAACCATGCTTTTTGACAAAGATATTGGGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTCAAAACCATGCTTTTTGACAAAGATGTTGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATCTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATCTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACTTTTTACCCCAAAGACAATGTCAAGACTATACTTTTTGACAAAGATATTGAGCTACGACCAAGTGCCTCCTTTTACCCAAATGACAATGTCAAGACTATACTTTATGAGAAAGATATTGAACCACGACCAGGTATCTCATTTTACCCAAATGATGAAAAAGTCAAGCTTTTTGTTAAAGATATTGAACCACGACCAAGCATCTCATCTTACCCAAGTACCACAACGTATCCTCACGATCACAACCCAAAAGTTTCCTCTACTGATTGTCACGACGAAGCTGACATACAGCTCCCACGAGCTTAA

mRNA sequence

ATGAAGATGGGTGCAATCTTTGGAATTACTCTCATTTTGCTTCTTATGTTTGTCAACAACATAGAGTCGAGACATGAACCAGGAGAACGCTTGAGTAATGTGGAAGGGAAAGAAGATAGCGTTGAAGGCAAGCAACCTGAAAATGAAAAACGGTTTGTCAAGGATATAGAACCAAGACCCAGTGCTACCTTTTATCCAAAAGAGGCTGAAAAGAAATCATTTTTTAAAGACATTGAGCCACGACCAAGTGCCACATTTTACCCAAATGAAAATGTCAATGTCATACTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACGTTTTACCCAAATGACAATATCAAAACCATGCTTTTTGACAAAGATATTGGGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTCAAAACCATGCTTTTTGACAAAGATGTTGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATCTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATCTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACTTTTTACCCCAAAGACAATGTCAAGACTATACTTTTTGACAAAGATATTGAGCTACGACCAAGTGCCTCCTTTTACCCAAATGACAATGTCAAGACTATACTTTATGAGAAAGATATTGAACCACGACCAGGTATCTCATTTTACCCAAATGATGAAAAAGTCAAGCTTTTTGTTAAAGATATTGAACCACGACCAAGCATCTCATCTTACCCAAGTACCACAACGTATCCTCACGATCACAACCCAAAAGTTTCCTCTACTGATTGTCACGACGAAGCTGACATACAGCTCCCACGAGCTTAA

Coding sequence (CDS)

ATGAAGATGGGTGCAATCTTTGGAATTACTCTCATTTTGCTTCTTATGTTTGTCAACAACATAGAGTCGAGACATGAACCAGGAGAACGCTTGAGTAATGTGGAAGGGAAAGAAGATAGCGTTGAAGGCAAGCAACCTGAAAATGAAAAACGGTTTGTCAAGGATATAGAACCAAGACCCAGTGCTACCTTTTATCCAAAAGAGGCTGAAAAGAAATCATTTTTTAAAGACATTGAGCCACGACCAAGTGCCACATTTTACCCAAATGAAAATGTCAATGTCATACTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACGTTTTACCCAAATGACAATATCAAAACCATGCTTTTTGACAAAGATATTGGGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTCAAAACCATGCTTTTTGACAAAGATGTTGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATCTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATGTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACATTTTACCCAAATGACAATCTTAAAACCTTAGTTTTTGACAAAGATATCGAGCCACGACCAAGTGCCACTTTTTACCCCAAAGACAATGTCAAGACTATACTTTTTGACAAAGATATTGAGCTACGACCAAGTGCCTCCTTTTACCCAAATGACAATGTCAAGACTATACTTTATGAGAAAGATATTGAACCACGACCAGGTATCTCATTTTACCCAAATGATGAAAAAGTCAAGCTTTTTGTTAAAGATATTGAACCACGACCAAGCATCTCATCTTACCCAAGTACCACAACGTATCCTCACGATCACAACCCAAAAGTTTCCTCTACTGATTGTCACGACGAAGCTGACATACAGCTCCCACGAGCTTAA

Protein sequence

MKMGAIFGITLILLLMFVNNIESRHEPGERLSNVEGKEDSVEGKQPENEKRFVKDIEPRPSATFYPKEAEKKSFFKDIEPRPSATFYPNENVNVILFDKDIEPRPSATFYPNDNIKTMLFDKDIGPRPSATFYPNDNVKTMLFDKDVEPRPSATFYPNDNLKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNLKTLVFDKDIEPRPSATFYPKDNVKTILFDKDIELRPSASFYPNDNVKTILYEKDIEPRPGISFYPNDEKVKLFVKDIEPRPSISSYPSTTTYPHDHNPKVSSTDCHDEADIQLPRA

Homology

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BLAST of Cp4.1LG04g00820 vs. TrEMBL
Match: A0A0A0K3R4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G262890 PE=4 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 4.7e-149
Identity = 260/393 (66.16%), Postives = 295/393 (75.06%), Query Frame = 1


Query: 1   MKMGAIFGITLILLLMFVNNIESRHEPGERLSNV----------EGKEDSVEGKQPENEK 60
           MK+   FGITLILLL+F N IESR+EPG +  NV          + KED  + K  +NE 
Sbjct: 1   MKIQPTFGITLILLLLFFNGIESRYEPGGQWKNVIEDDSLPVVSQEKEDCFKYKSLKNEN 60

Query: 61  RFVKDIEPRPSATFYPKEAEKKSFF-KDIEPRPSATFYPNENVNVILFDKDIEPRPSATF 120
            F  D +PRPS TFYP +  K  FF KDIEPRPSATFYPN+      F KDIEPRPSATF
Sbjct: 61  TFFNDTKPRPSITFYPNDESKDRFFTKDIEPRPSATFYPNDESKDRFFTKDIEPRPSATF 120

Query: 121 YPNDNIKTMLFDKDIGPRPSATFYPNDNVKTMLFDKDVEPRPSATFYPNDNLKTLVFDKD 180
           YPND+ K  LF KDI PRPSATFYPND+ K  LF KD+EPRPSATFYPND+ K  +F KD
Sbjct: 121 YPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKD 180

Query: 181 IEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDN 240
           IEPRPSATFYPND+ K  +F KDIEPRPSATFYPND+ K  +F KDIEPRPSATFYPND+
Sbjct: 181 IEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDD 240

Query: 241 VKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRP 300
            K  +F KDIEPRPSATFYPND+ K  +F KDIEPRPSATFYPND+ K  +F KDIEPRP
Sbjct: 241 TKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRP 300

Query: 301 SATFYPNDNLKTLVFDKDIEPRPSATFYPKDNVKTILFDKDIELRPSASFYPNDNVKTIL 360
           SATFYPND+ K  +F KDIEPRPSATFYP D+ K  LF KDIE RPSA+FYPND+     
Sbjct: 301 SATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTNKKF 360

Query: 361 YEKDIEPRPGISFYP-NDEKVKLFVKDIEPRPS 382
           + KDIEPRP ++FYP ND K KLF+K+IE R S
Sbjct: 361 FTKDIEPRPSVTFYPNNDSKNKLFIKNIESRLS 393

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BLAST of Cp4.1LG04g00820 vs. TrEMBL
Match: A0A0A0K5Y0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G259390 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.3e-82
Identity = 165/346 (47.69%), Postives = 233/346 (67.34%), Query Frame = 1


Query: 4   GAIFGITLILLLMFVNNIESRHEPGE---RLSNVEGKEDSVEGKQPENEKRFVKDIEPRP 63
           G IF I + LL +F   IESRHEPG+   R    +  +D  E  + E+ K F   IEPRP
Sbjct: 3   GLIF-INVFLLALFAGTIESRHEPGDHHWRNLMKDKMDDCTETLKVEDGKLF---IEPRP 62

Query: 64  SATFYPKEAEKKSFFKDIEPRPSATFYPNENVNVILFDKDIEPRPSATFYPNDNIKTMLF 123
            ATF+  + + K   KD+E RPS +F P++     LF + IE  PS  FYP++ IK  L 
Sbjct: 63  QATFHG-DVQTKILSKDLEQRPSVSFRPDDT-RTKLFVEHIELSPSIKFYPHE-IKAKL- 122

Query: 124 DKDIGPRPSATFYPNDNVKTMLFDKDVEPRPSATFYPNDNLKTLVFDKDIEPRPSATFYP 183
           DKD    P    Y ND +K+  F KD+E +  A FY +DN + L   KDIEPRP+ +FYP
Sbjct: 123 DKDTDVPPRTLIYLND-IKSNFFVKDIERQLRARFYRDDNKRKLA--KDIEPRPNVSFYP 182

Query: 184 NDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIE 243
           +D  KT +F +D+EPRP+ +FYP+D  KT +F +D+EPRP+ +FYP+D  KT +F +D+E
Sbjct: 183 DDT-KTKLFAEDLEPRPNVSFYPDDETKTKLFAEDVEPRPNVSFYPDDETKTKLFAEDVE 242

Query: 244 PRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNLK 303
           PRP+ +FYP+D+ KT +F +D+EPRP+ +FYP+D  KT +F +D+EPRP++ FYP+D++K
Sbjct: 243 PRPNVSFYPDDDTKTKLFVEDVEPRPNVSFYPDDETKTKLFAEDVEPRPNSFFYPDDDIK 302

Query: 304 TLVFDKDIEPRPSATFYPKDNVKTILFDKDIELRPSASFYPNDNVK 347
           T +  ++IEPRP+ +FYP D+ KT L  +DIE RP+ SFYP DN+K
Sbjct: 303 TKLLVQEIEPRPNVSFYPDDDTKTKLLAEDIEPRPNVSFYP-DNLK 335

[Close]

BLAST of Cp4.1LG04g00820 vs. TrEMBL
Match: A0A0A0K958_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G262900 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.2e-80
Identity = 159/273 (58.24%), Postives = 182/273 (66.67%), Query Frame = 1


Query: 1   MKMGAIFGITLILLLMFVNNIESRHEPGERLSNV----------EGKEDSVEGKQPENEK 60
           MK+   FGITL LLL+F N IESR+EPG +  NV          + KED  + K  +NE 
Sbjct: 1   MKIKPTFGITLFLLLLFFNGIESRYEPGGQWKNVIEDDSLPVVSQEKEDCFKYKSLKNEN 60

Query: 61  RFVKDIEPRPSATFYPKEAEKKSFF-KDIEPRPSATFYPNENVNVILFDKDIEPRPSATF 120
            F  DI+PRPS TFYP +  K  FF KDIEPRPS TFYPN++    LF KDIEPRPS TF
Sbjct: 61  TFFNDIKPRPSITFYPNDGSKDKFFIKDIEPRPSLTFYPNDDTKNKLFTKDIEPRPSLTF 120

Query: 121 YPNDNIKTMLFDKDIGPRPSATFYPNDNVKTMLFDKDVEPRPSATFYPNDNLKTLVFDKD 180
           YPND+ K  LF KDI PRPS TFYPND+ K  LF KD+EPRPS TFYPND+ K  +F KD
Sbjct: 121 YPNDDTKNKLFTKDIEPRPSLTFYPNDDTKNKLFTKDIEPRPSLTFYPNDDTKNKLFTKD 180

Query: 181 IEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDN 240
           IEPRPS TFYPND  K   F KDIEPRPS TFYPND  K  VF KDIEPRPS TFYP++ 
Sbjct: 181 IEPRPSLTFYPNDESKDKFFIKDIEPRPSTTFYPNDESKDKVFIKDIEPRPSLTFYPSNE 240

Query: 241 VKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDI 263
            K  +F K+IE        P+   K  +F KD+
Sbjct: 241 NKDKLFTKNIE-------VPSIIAKNNIFRKDM 266

[Close]

BLAST of Cp4.1LG04g00820 vs. TrEMBL
Match: M1C385_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022822 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.4e-59
Identity = 127/342 (37.13%), Postives = 200/342 (58.48%), Query Frame = 1


Query: 76  KDIEPRPSATFYPNENVNVILFDKDIEPRPSATFYPNDNIKTMLFDKDIGPRPSATFYPN 135
           KD EPRP+ + Y +++   +  +KD EPRP+ + Y +D+   +  +KD  PRP+ + Y +
Sbjct: 57  KDFEPRPNVSSYRDDDNVGLKQEKDFEPRPNVSSYRDDDNVGLKQEKDFEPRPNVSSYRD 116

Query: 136 DNVKTMLFDKDVEPRPSATFYPNDNLKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEP 195
           D+   +  +KD EPRP+ + Y +D+   L  +KD EPRP+ + Y +D+   L   KD EP
Sbjct: 117 DDNVGLKQEKDFEPRPNVSSYRDDDNVGLKQEKDFEPRPNVSGYHDDD-DCLKQKKDFEP 176

Query: 196 RPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKT 255
           RP+ + Y +D+   L  +KD EPRP+ + Y +D+   L  +KD EPRP+ + Y +D+   
Sbjct: 177 RPNVSSYHDDDNVGLKQEKDFEPRPNVSSYHDDDNVGLKQEKDFEPRPNVSSYHDDDNVG 236

Query: 256 LVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNLKTLVFDKDIEPRPSAT 315
           L  +KD EPRP+ + Y +D+   L  +KD EPRP+ + Y +D+   L  +KD EPRP+ +
Sbjct: 237 LKQEKDFEPRPNVSSYHDDDNVGLKQEKDFEPRPNVSSYHDDDNVGLKQEKDFEPRPNVS 296

Query: 316 FYPKDNVKTILFDKDIELRPSASFYPNDNVKTILYEKDIEPRPGISFYPNDEKVKL-FVK 375
            Y  D+   +  +KD E RP+ S Y +D+   +  EKD EPRP +S Y +D+ V L   K
Sbjct: 297 SYRDDDNVGLKQEKDFEPRPNVSSYRDDDNVGLKQEKDFEPRPNVSSYRDDDNVGLKQEK 356

Query: 376 DIEPRPSISSYPSTTT----YPHDHNPKVSSTDCHDEADIQL 413
           D EPRP++SSY            D  P+ + +  HD+ ++ L
Sbjct: 357 DFEPRPNVSSYRDDDNVGLKQEKDFEPRPNVSSYHDDDNVGL 397

[Close]

BLAST of Cp4.1LG04g00820 vs. TrEMBL
Match: A0A164VLK0_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022107 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.8e-58
Identity = 154/371 (41.51%), Postives = 207/371 (55.80%), Query Frame = 1


Query: 54  KDIEPRPSATFYPKEAEKK---SFFKDIEPRPSATFYPNENV--NVILFDKDIEPRPSAT 113
           +DIEPRP+ + Y  + + K   +   DIEPRP+ + Y  +    +   FDKDIEPRP+ +
Sbjct: 87  RDIEPRPNISAYHDDEKLKKGNAHVDDIEPRPNISSYRGDKKLRDNESFDKDIEPRPNIS 146

Query: 114 FYPNDNI--KTMLFDKDIGPRPSATFYPNDNV--KTMLFDKDVEPRPSATFYPNDNL--K 173
            Y +D    K   +  DI PRP+ + Y +D        FDKD+EPRP+ + Y +D    K
Sbjct: 147 AYHDDEKLKKGNSYRDDIEPRPNISSYHDDEKLRNDESFDKDIEPRPNISAYHDDEKLKK 206

Query: 174 TLVFDKDIEPRPSATFYPNDNV--KTLVFDKDIEPRPSATFYPNDNV--KTLVFDKDIEP 233
              +  DIEPRP+ + Y +D        FDKDIEPRP+ + Y +D    K+  F KDIEP
Sbjct: 207 GNSYMDDIEPRPNISSYHDDEKLRNNESFDKDIEPRPNISSYHDDEKLQKSDSFSKDIEP 266

Query: 234 RPSATFYPNDNV--KTLVFDKDIEPRPSATFYPNDNVKTL--VFDKDIEPRPSATFYPND 293
           RP+ + Y ++        FDK+IEPRP+ + Y +    T    FDKDIEPRP+ + Y +D
Sbjct: 267 RPNISSYHDEEKLRNDESFDKNIEPRPNISAYHDGEKLTENESFDKDIEPRPNISSYHDD 326

Query: 294 NV--KTLVFDKDIEPRPSATFYPNDNL--KTLVFDKDIEPRPSATFYPKDNV--KTILFD 353
               K+  F KDIEPRP+ + Y +D     T  FDKDIE RP+ + Y  D    K   F 
Sbjct: 327 EKLKKSDSFSKDIEPRPNISSYHDDEKLRDTESFDKDIEARPNISSYHDDEKLKKNDSFS 386

Query: 354 KDIELRPSASFYPNDNVKTI--LYEKDIEPRPGISFYPNDEKVK---LFVKDIEPRPSIS 395
           KDIE RP+ S Y  D   T    + +DIEPRP IS Y +DEK+K    F KDIEPRP+IS
Sbjct: 387 KDIEPRPNISAYQGDKKLTENESFIRDIEPRPNISSYHDDEKLKKTDAFTKDIEPRPNIS 446

[Close]

BLAST of Cp4.1LG04g00820 vs. NCBI nr
Match: gi|778726206|ref|XP_011659073.1| (PREDICTED: proteoglycan 4-like isoform X1 [Cucumis sativus])

HSP 1 Score: 550.8 bits (1418), Expect = 2.0e-153
Identity = 267/399 (66.92%), Postives = 302/399 (75.69%), Query Frame = 1


Query: 1   MKMGAIFGITLILLLMFVNNIESRHEPGERLSNV----------EGKEDSVEGKQPENEK 60
           MK+   FGITLILLL+F N IESR+EPG +  NV          + KED  + K  +NE 
Sbjct: 1   MKIQPTFGITLILLLLFFNGIESRYEPGGQWKNVIEDDSLPVVSQEKEDCFKYKSLKNEN 60

Query: 61  RFVKDIEPRPSATFYPKEAEKKSFF-KDIEPRPSATFYPNENVNVILFDKDIEPRPSATF 120
            F  D +PRPS TFYP +  K  FF KDIEPRPSATFYPN+      F KDIEPRPSATF
Sbjct: 61  TFFNDTKPRPSITFYPNDESKDRFFTKDIEPRPSATFYPNDESKDRFFTKDIEPRPSATF 120

Query: 121 YPNDNIKTMLFDKDIGPRPSATFYPNDNVKTMLFDKDVEPRPSATFYPNDNLKTLVFDKD 180
           YPND+ K  LF KDI PRPSATFYPND+ K  LF KD+EPRPSATFYPND+ K  +F KD
Sbjct: 121 YPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKD 180

Query: 181 IEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDN 240
           IEPRPSATFYPND+ K  +F KDIEPRPSATFYPND+ K  +F KDIEPRPSATFYPND+
Sbjct: 181 IEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDD 240

Query: 241 VKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRP 300
            K  +F KDIEPRPSATFYPND+ K  +F KDIEPRPSATFYPND+ K  +F KDIEPRP
Sbjct: 241 TKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRP 300

Query: 301 SATFYPNDNLKTLVFDKDIEPRPSATFYPKDNVKTILFDKDIELRPSASFYPNDNVKTIL 360
           SATFYPND+ K  +F KDIEPRPSATFYP D+ K  LF KDIE RPSA+FYPND  K   
Sbjct: 301 SATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDESKDKF 360

Query: 361 YEKDIEPRPGISFYPNDE-KVKLFVKDIEPRPSISSYPS 388
           + KDIEPRP  +FYPNDE K K+F+KDIEPRPS++ YPS
Sbjct: 361 FIKDIEPRPSTTFYPNDESKDKVFIKDIEPRPSLTFYPS 399

[Close]

BLAST of Cp4.1LG04g00820 vs. NCBI nr
Match: gi|700189107|gb|KGN44340.1| (hypothetical protein Csa_7G262890 [Cucumis sativus])

HSP 1 Score: 535.8 bits (1379), Expect = 6.7e-149
Identity = 260/393 (66.16%), Postives = 295/393 (75.06%), Query Frame = 1


Query: 1   MKMGAIFGITLILLLMFVNNIESRHEPGERLSNV----------EGKEDSVEGKQPENEK 60
           MK+   FGITLILLL+F N IESR+EPG +  NV          + KED  + K  +NE 
Sbjct: 1   MKIQPTFGITLILLLLFFNGIESRYEPGGQWKNVIEDDSLPVVSQEKEDCFKYKSLKNEN 60

Query: 61  RFVKDIEPRPSATFYPKEAEKKSFF-KDIEPRPSATFYPNENVNVILFDKDIEPRPSATF 120
            F  D +PRPS TFYP +  K  FF KDIEPRPSATFYPN+      F KDIEPRPSATF
Sbjct: 61  TFFNDTKPRPSITFYPNDESKDRFFTKDIEPRPSATFYPNDESKDRFFTKDIEPRPSATF 120

Query: 121 YPNDNIKTMLFDKDIGPRPSATFYPNDNVKTMLFDKDVEPRPSATFYPNDNLKTLVFDKD 180
           YPND+ K  LF KDI PRPSATFYPND+ K  LF KD+EPRPSATFYPND+ K  +F KD
Sbjct: 121 YPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKD 180

Query: 181 IEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDN 240
           IEPRPSATFYPND+ K  +F KDIEPRPSATFYPND+ K  +F KDIEPRPSATFYPND+
Sbjct: 181 IEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDD 240

Query: 241 VKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRP 300
            K  +F KDIEPRPSATFYPND+ K  +F KDIEPRPSATFYPND+ K  +F KDIEPRP
Sbjct: 241 TKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRP 300

Query: 301 SATFYPNDNLKTLVFDKDIEPRPSATFYPKDNVKTILFDKDIELRPSASFYPNDNVKTIL 360
           SATFYPND+ K  +F KDIEPRPSATFYP D+ K  LF KDIE RPSA+FYPND+     
Sbjct: 301 SATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTNKKF 360

Query: 361 YEKDIEPRPGISFYP-NDEKVKLFVKDIEPRPS 382
           + KDIEPRP ++FYP ND K KLF+K+IE R S
Sbjct: 361 FTKDIEPRPSVTFYPNNDSKNKLFIKNIESRLS 393

[Close]

BLAST of Cp4.1LG04g00820 vs. NCBI nr
Match: gi|778726210|ref|XP_011659075.1| (PREDICTED: proteoglycan 4-like isoform X2 [Cucumis sativus])

HSP 1 Score: 531.6 bits (1368), Expect = 1.3e-147
Identity = 261/394 (66.24%), Postives = 296/394 (75.13%), Query Frame = 1


Query: 1   MKMGAIFGITLILLLMFVNNIESRHEPGERLSNV----------EGKEDSVEGKQPENEK 60
           MK+   FGITLILLL+F N IESR+EPG +  NV          + KED  + K  +NE 
Sbjct: 1   MKIQPTFGITLILLLLFFNGIESRYEPGGQWKNVIEDDSLPVVSQEKEDCFKYKSLKNEN 60

Query: 61  RFVKDIEPRPSATFYPKEAEKKSFF-KDIEPRPSATFYPNENVNVILFDKDIEPRPSATF 120
            F  D +PRPS TFYP +  K  FF KDIEPRPSATFYPN+      F KDIEPRPSATF
Sbjct: 61  TFFNDTKPRPSITFYPNDESKDRFFTKDIEPRPSATFYPNDESKDRFFTKDIEPRPSATF 120

Query: 121 YPNDNIKTMLFDKDIGPRPSATFYPNDNVKTMLFDKDVEPRPSATFYPNDNLKTLVFDKD 180
           YPND+ K  LF KDI PRPSATFYPND+ K  LF KD+EPRPSATFYPND+ K  +F KD
Sbjct: 121 YPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKD 180

Query: 181 IEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDN 240
           IEPRPSATFYPND+ K  +F KDIEPRPSATFYPND+ K  +F KDIEPRPSATFYPND+
Sbjct: 181 IEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDD 240

Query: 241 VKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRP 300
            K  +F KDIEPRPSATFYPND+ K  +F KDIEPRPSATFYPND+ K  +F KDIEPRP
Sbjct: 241 TKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRP 300

Query: 301 SATFYPNDNLKTLVFDKDIEPRPSATFYPKDNVKTILFDKDIELRPSASFYPNDNVKTIL 360
           SATFYPND+ K  +F KDIEPRPSATFYP D+ K  LF KDIE RPSA+FYPND  K  +
Sbjct: 301 SATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDESKDKV 360

Query: 361 YEKDIEPRPGISFYP-NDEKVKLFVKDIEPRPSI 383
           + KDIEPRP ++FYP N+ K KLF K+IE  PSI
Sbjct: 361 FIKDIEPRPSLTFYPSNENKDKLFTKNIEV-PSI 393

[Close]

BLAST of Cp4.1LG04g00820 vs. NCBI nr
Match: gi|778726203|ref|XP_004151481.2| (PREDICTED: uncharacterized protein LOC101212185 [Cucumis sativus])

HSP 1 Score: 315.1 bits (806), Expect = 1.9e-82
Identity = 165/346 (47.69%), Postives = 233/346 (67.34%), Query Frame = 1


Query: 4   GAIFGITLILLLMFVNNIESRHEPGE---RLSNVEGKEDSVEGKQPENEKRFVKDIEPRP 63
           G IF I + LL +F   IESRHEPG+   R    +  +D  E  + E+ K F   IEPRP
Sbjct: 3   GLIF-INVFLLALFAGTIESRHEPGDHHWRNLMKDKMDDCTETLKVEDGKLF---IEPRP 62

Query: 64  SATFYPKEAEKKSFFKDIEPRPSATFYPNENVNVILFDKDIEPRPSATFYPNDNIKTMLF 123
            ATF+  + + K   KD+E RPS +F P++     LF + IE  PS  FYP++ IK  L 
Sbjct: 63  QATFHG-DVQTKILSKDLEQRPSVSFRPDDT-RTKLFVEHIELSPSIKFYPHE-IKAKL- 122

Query: 124 DKDIGPRPSATFYPNDNVKTMLFDKDVEPRPSATFYPNDNLKTLVFDKDIEPRPSATFYP 183
           DKD    P    Y ND +K+  F KD+E +  A FY +DN + L   KDIEPRP+ +FYP
Sbjct: 123 DKDTDVPPRTLIYLND-IKSNFFVKDIERQLRARFYRDDNKRKLA--KDIEPRPNVSFYP 182

Query: 184 NDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIE 243
           +D  KT +F +D+EPRP+ +FYP+D  KT +F +D+EPRP+ +FYP+D  KT +F +D+E
Sbjct: 183 DDT-KTKLFAEDLEPRPNVSFYPDDETKTKLFAEDVEPRPNVSFYPDDETKTKLFAEDVE 242

Query: 244 PRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNLK 303
           PRP+ +FYP+D+ KT +F +D+EPRP+ +FYP+D  KT +F +D+EPRP++ FYP+D++K
Sbjct: 243 PRPNVSFYPDDDTKTKLFVEDVEPRPNVSFYPDDETKTKLFAEDVEPRPNSFFYPDDDIK 302

Query: 304 TLVFDKDIEPRPSATFYPKDNVKTILFDKDIELRPSASFYPNDNVK 347
           T +  ++IEPRP+ +FYP D+ KT L  +DIE RP+ SFYP DN+K
Sbjct: 303 TKLLVQEIEPRPNVSFYPDDDTKTKLLAEDIEPRPNVSFYP-DNLK 335

[Close]

BLAST of Cp4.1LG04g00820 vs. NCBI nr
Match: gi|700189108|gb|KGN44341.1| (hypothetical protein Csa_7G262900 [Cucumis sativus])

HSP 1 Score: 308.5 bits (789), Expect = 1.7e-80
Identity = 159/273 (58.24%), Postives = 182/273 (66.67%), Query Frame = 1


Query: 1   MKMGAIFGITLILLLMFVNNIESRHEPGERLSNV----------EGKEDSVEGKQPENEK 60
           MK+   FGITL LLL+F N IESR+EPG +  NV          + KED  + K  +NE 
Sbjct: 1   MKIKPTFGITLFLLLLFFNGIESRYEPGGQWKNVIEDDSLPVVSQEKEDCFKYKSLKNEN 60

Query: 61  RFVKDIEPRPSATFYPKEAEKKSFF-KDIEPRPSATFYPNENVNVILFDKDIEPRPSATF 120
            F  DI+PRPS TFYP +  K  FF KDIEPRPS TFYPN++    LF KDIEPRPS TF
Sbjct: 61  TFFNDIKPRPSITFYPNDGSKDKFFIKDIEPRPSLTFYPNDDTKNKLFTKDIEPRPSLTF 120

Query: 121 YPNDNIKTMLFDKDIGPRPSATFYPNDNVKTMLFDKDVEPRPSATFYPNDNLKTLVFDKD 180
           YPND+ K  LF KDI PRPS TFYPND+ K  LF KD+EPRPS TFYPND+ K  +F KD
Sbjct: 121 YPNDDTKNKLFTKDIEPRPSLTFYPNDDTKNKLFTKDIEPRPSLTFYPNDDTKNKLFTKD 180

Query: 181 IEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDIEPRPSATFYPNDN 240
           IEPRPS TFYPND  K   F KDIEPRPS TFYPND  K  VF KDIEPRPS TFYP++ 
Sbjct: 181 IEPRPSLTFYPNDESKDKFFIKDIEPRPSTTFYPNDESKDKVFIKDIEPRPSLTFYPSNE 240

Query: 241 VKTLVFDKDIEPRPSATFYPNDNVKTLVFDKDI 263
            K  +F K+IE        P+   K  +F KD+
Sbjct: 241 NKDKLFTKNIE-------VPSIIAKNNIFRKDM 266

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g00820 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG04g00820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3R4_CUCSA	4.7e-149	66.16	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G262890 PE=4 SV=1	[more]
A0A0A0K5Y0_CUCSA	1.3e-82	47.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G259390 PE=4 SV=1	[more]
A0A0A0K958_CUCSA	1.2e-80	58.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G262900 PE=4 SV=1	[more]
M1C385_SOLTU	3.4e-59	37.13	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022822 PE=4 SV=1	[more]
A0A164VLK0_DAUCA	3.8e-58	41.51	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022107 PE=4 SV=1	[more]

BLAST of Cp4.1LG04g00820 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG04g00820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778726206\|ref\|XP_011659073.1\|	2.0e-153	66.92	PREDICTED: proteoglycan 4-like isoform X1 [Cucumis sativus]	[more]
gi\|700189107\|gb\|KGN44340.1\|	6.7e-149	66.16	hypothetical protein Csa_7G262890 [Cucumis sativus]	[more]
gi\|778726210\|ref\|XP_011659075.1\|	1.3e-147	66.24	PREDICTED: proteoglycan 4-like isoform X2 [Cucumis sativus]	[more]
gi\|778726203\|ref\|XP_004151481.2\|	1.9e-82	47.69	PREDICTED: uncharacterized protein LOC101212185 [Cucumis sativus]	[more]
gi\|700189108\|gb\|KGN44341.1\|	1.7e-80	58.24	hypothetical protein Csa_7G262900 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR026906	LRR_5
IPR024489	Organ_specific_prot

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g00820.1	Cp4.1LG04g00820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024489	Organ specific protein	PFAM	PF10950	DUF2775	coord: 257..317 score: 8.6E-7coord: 165..225 score: 9.8E-7coord: 96..156 score: 1.6E-6coord: 43..87 score: 2.4E-7coord: 188..248 score: 6.6E-7coord: 326..385 score: 1.6E-8coord: 119..179 score: 1.9E-6coord: 234..294 score: 6.
IPR026906	Leucine rich repeat 5	PFAM	PF13306	LRR_5	coord: 153..274 score: 1.
None	No IPR available	PANTHER	PTHR33731	FAMILY NOT NAMED	coord: 1..275 score: 6.0
None	No IPR available	PANTHER	PTHR33731:SF1	SUBFAMILY NOT NAMED	coord: 1..275 score: 6.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG04g00820	Wax gourd	cpewgoB0857
Cp4.1LG04g00820	Cucurbita pepo (Zucchini)	cpecpeB307
Cp4.1LG04g00820	Cucurbita pepo (Zucchini)	cpecpeB496
Cp4.1LG04g00820	Cucumber (Gy14) v1	cgycpeB0645
Cp4.1LG04g00820	Cucurbita maxima (Rimu)	cmacpeB147
Cp4.1LG04g00820	Cucurbita maxima (Rimu)	cmacpeB540
Cp4.1LG04g00820	Cucurbita moschata (Rifu)	cmocpeB127
Cp4.1LG04g00820	Cucurbita moschata (Rifu)	cmocpeB591
Cp4.1LG04g00820	Wild cucumber (PI 183967)	cpecpiB700
Cp4.1LG04g00820	Cucumber (Chinese Long) v2	cpecuB698
Cp4.1LG04g00820	Bottle gourd (USVL1VR-Ls)	cpelsiB532
Cp4.1LG04g00820	Watermelon (Charleston Gray)	cpewcgB591
Cp4.1LG04g00820	Melon (DHL92) v3.5.1	cpemeB605
Cp4.1LG04g00820	Cucumber (Gy14) v2	cgybcpeB972
Cp4.1LG04g00820	Melon (DHL92) v3.6.1	cpemedB716
Cp4.1LG04g00820	Cucumber (Chinese Long) v3	cpecucB0871