Cp4.1LG04g00290 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g00290
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Chorismate mutase
Location	Cp4.1LG04 : 1839667 .. 1844907 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTTCCTCGACTCGCCAACACCGTCACAGATTCCTTCCCATTTCTGCTCTTTTTCTCCTCTTTTTCATCGCTCCATAGCTTAACTTCTTCGATACTGTTTCAATGGAGATGGAGGCAAAAATTTTGAGAACGGCCCCATATATTCACCCGCTTCGATTCCGTTCTCGACCAAGATGTTCTTTGTTCGTACATCGGATGCCCGCAACCAGTTCGAAGTATTGCTCGAGTGTGCTGAGATGCGGCCTTCGCCCTGTTCAAGCTTCTTCCGCTTCCACCGGGTATATACACCACAATCCTTTGACGAATCTTGTTGTTTGCTTCTTCTTTCTATGCCTGCTACTTAATTTGCTGTCTGATTTGTTATGCTCGCCAAATACTTGTGGTGTTGTCTTTAATTTGCTTCTTTTCGTTAGATGCAAATGCTCAAGTCGAACTTTCCATTGTCGTTGAATGTTAGATTTTTGGATTTGGCGACATGGTAATTAGGAAAGGGAGGCGGTAGTTTTAGGTGCCTGCTGTTTATGTACACAATTATAACACATTCAGTCAACTCTTTGTGGTTCTTTTAGGTTCTGAGCATGTATATTCTAGATTAAATTACCAAATGTATCCTCTCAATTTTGATGGTCGTGTCTGTATAGTTCTTAAATTTTTAAAAGGTTTCAATCAAGTTAATCAAGTTGCTCCACTTTGAATTTTGATTCTATGTAGTGTGTTTTAACATCAAACAAAAGTAAGTGGAAAACTGGACAAAATAGAGTGGCACAACCAATAAAAGAGTTTCAAAAAGTTGTTTCAAAAGGAGGTATGTTGTATGTGCCATTTTATTTTGTTCAACTATCCACTTTCTTCTTCTAATGCCGTGAAAATTAGTTGTTTTTGTTATAAACATTTTATGTTATTTTTAAGTTAATGACAATCGGTAATAGGACAATGCAGAATTTGGATATAAGATAATAGGACTACGTTGAATTACAGTTCAAAGTTTGAGAGCATATTTGAAACCTTTTAGAGTTTTTAAGACTCAGAAGCATAGTAATGAAAGTTCATGATCTAAACAATGTCCTGTGTTAAGAACTTTGTTGCCCTTTGCATGACATTTGTTTACACAATCTTATGATTTTAGGCATGGCCAAAGTCCATTAAAATTACATCATCATATCTATTTTGTATGCCACTTGTCTAGAAAGGTTCCGAAAGGTGCTTGACAATACTTGTAAAAGAAAATGTTTTTCAAAGTAAGTCTATCTGGTCCATTTCAGGTGTCTCTATGATTTCCTCGACTTAGAGACCCTTGCTGCATTTTTTTACAAGCTAAAGAGTAATTCTTGTAGGTTGAAGGATCTAAAATCCCTTTGCTTTTCGTTCTTTTCCTCCTCAATTAATTGAAATTGGATTGCTGTAGACCACTAGCAAGGAAGAAACGGGTGGACATGAGTGAGACCTTGACCCTCGAGGGTATAAGATTTTCATTAATCATTCAGGAGGACAGCATAATATTCAATCTTATGGAGAGAACACAGTATTGTTACAATGCCAATACTTATGACCGGGATGCTTTTGTTATGGATGGGTTTCATGGTTCTTTGGTAGAGTATATGGTCAAAGAAACTGAAAAGCTTCATGCTCAGGTATGCGAGAAGACAGAAACTTTAGTAAAAATTAAGATGTAAAATAATGAGAGGAAGGTTTCATTTTCATCGGATTTTCTGCTTAACAACAATCTGTTTCATGTTAGGTGGGTAGATACAAAAGCCCTGATGAACATCCTTTCTTCCCAAATGACTTGCCGGAACCGCTATTGCCTCCAATGCAGTATCCTCAGGTAAACTTAAGCTCGCATGCCATTAAAATTGTTTGTCCTTAGAACATTTCCGAACTAATCTACATGTTTCGTTAGTCTATTCAATTTAGTAGCAGACACTATTCAAAAAATGGGGACCACATTCGCTTACGATCATGATCTCATTCTTCTTTCCTATTTTTAACAACTTCCCTCCACGGTACCCTTCTCTTTCGAAATTATGTGGTTGTCCCTATCGAAATCTAGAACTCAAAGTTGTGAAACAAAAGAATGCAACATTCTATTGACTTGATATACTATAGTTCAAGAATCTTAATACATCCTAGAGGAAAAGCTCCCTAACCTTAATAATCAAAGAAGGGCAAGCCAGACCCTTAAGAGAAATTCGAAAATTGGTAACATATACTATTGCTGGTTTAATGATGCTCACATTGGCTATGTTGTCAATTTTACTATCATAAATAGCTGTGTTTCGTTAATAGTTTCAATGGTCCATCCTATTTCAACAATTCTAACTTCTCAAATTGAAATATTTGAACTCTTCTGCAATCATTTCCCTACAAAACCAGGCTAATTGCCTAACCATGTATGTTATATATGGCCATGCCTCAGGGCATATTGGTCGAGGTGGATTTTCTTTTTTCCTTCTTTTGATCAATCAAAGCCTAGAATCCTCTCTGGTAAATATCTTTTAAGGATGCTTGGAGTTATGCTCATCTTGAGTTGGTCTCCATAATACGTTCTACAGTTATATTTCACTATGATTGAGCTTAAAAATAAAAAAGAAATCTTAGTATGTAACTGATAACATGACATCTGAGCAATGCTCTTGAAATCGGGCTCGATATTGTAAATGGTTCTGTTGCTCTGTTTTCTTATATGTCAACTACTTATGTGGCAAACAGGTACTACATCCAGCCGCAGATTTGATTAACATCAATCCAAAAGTATGGGACATGTACTTTAGGGATCTCATTCCTAGATTAGTGAAGGAAGGAGATGATGGGAATTGTGGATCAAGTGCTGTTTGCGACACATTGTGTTTGCAGGTGTGCCTTTCAACCAATCCATTTCATGAATCATGTTCTTGTTAAAGTGAAGGCTAAATTAATAAAAATACCTCTTAACATTTCATTTTGTCTTTTAACTTTCAAAAGTTTCAATAATACCCTTAAACTTTCAAAAAGTCTAAAAAATAACTTTAAACTTTAAAACAAACTTAAAAAATACCCTTACCGTTGGTTTTGGATGGAAACCGTTAATACTTTGTTTCAAAAATACTCTTGAACTTTTAAAAGTGTTTCAAAAATACCTTTTTATAAAAAGTGTTTAAAAAATACCCTTGAGTTTTCAAAAGTTTCATTAATACCCTTAAACTTTTTTAAAAACTTTAAAAATACCTTTAAACTTTTTTTAAAAGTTAAAAAATACTCATCATAAATATCATGCTTCAAAATACTCCCTTTTTTAAAAACTTTAAAAATACCTTTAAACTTTTTTTAAAAGTTAAAAAATACTCATCATAAATACCATACTTCAGAATGCTCATAAACTTTCAAAAGTAACATTAAAAGTTTGGAGACAATTTATGAGGTGTTGATAAGCGGTTTCCACCCATATATTGACAATAAAAAAAATTTCTGTTTTTTTTATATATAAAGGTGGTATTAATGTTATTTTTAAAATTTTATGAGTGTTTTTTAAACAAATTACTAACGACAAGAGTATTTTTTAACTATTTTTTAACTTGTTTAAAAAGTCGAAGGATATTAATGAAACTTTTTAAAGTTCAAGGGTATTTTTGAAATAAAGTACTAACGGTTTCTATCCAAAATTACGGCAAGAGTATTTTTTAGATTTTTTTGAAAGTCTAGGGTATTATTAAAACTTTTGAGAGTTTAGGAGCATTTTTTGAGACAAAGTGGAAGATTTATGAGTATTTTTCAATTAATTTAGCCTAAAATAAATATGAGTATTTTTCAATTAATTTAGCCTAAAATAAATATTAAGATAAAAAGAAAAAAGAGGACAGACAACAAAAGAATTAGATAGCTAGCATAATAACAAATTTGTTGTCCTCTATGCGGCAATAATCTTGTATATTCCAGACTTTACAATATTGAGCCATGTTTCTTGTCTTCATATATGTTATGTGCTGCTCAGCTGTTGAAGTTATATCTCATTTCACTAACTTTACTCAAAATTTCAACATTTGATTTTTAACTGTATAAATGTGGCCTATGGTACATAAATCAGCATTTCAATTTTATGGGATGCCATCGAAGGGACTTACGGTCTCTACTTCATCCTCTAGACTTCGTTTGCAGTGTTTGAGTCGAGCCAATTTTAGGCGATTTTAGATTTCATCTGGGTTATGTTATTAAAAACCATCAGGTTAGTTGTTTTCAAGAAGCATTTCCTTTTTATTCCACTTTCTTTAGCTTGCTGGTCTTGCTGCTACTAGTTTAACGTGGTCTGGATTCTTTTATTGGTTACTAGAAAATCGAAATCACCTAATCCTCTCTCGTTGTATTAGTTTACTTTACTGACTTAAAAATGGGAAGTCTTAAGTCGATTATTGGGACAAGCACATTAATAAGAGCCAAATATATCGATACTTAGGCCCCGTTAGATAACCATTTAGAAAATGTCGCAGAATTAAGTACACAAGAAATTCACCGTTTATGCATAAACTTCACGTTGATTAACATGGCAATCTCCAATAATTGTATGAATGAATTCCTTACTTTGGCAGGCTTTATCAAAGAGAATCCATTATGGAAAATTCGTAGCAGAAGCTAAGTTTCGAGCCTCACCGGAGGCGTACGAAGCAGCTATTAGAGCACAGGTAAACAAACTCAAACCAGATGGAACCCTCCAGCTGACTCTTTTCTGGATTTTCATTCAATAACTTTTTCCTTGTGTAAATTTTTCAAAGGATAAGCAAAAACTGATGGATATCTTGACATACCCGATGGTGGAGGAGGTTGTGAAGAGGCGAGTGGAGATGAAAGCAACGGTTTATGGACAAGAGGTAACGACCGATGCACCGAAAGCTGAATCCCGAGCATCTTATAAGATCAAACCCAGCTTGGTTGCTGATCTATATGGGGATTGGATCATGCCATTGACTAAGGAAGTTCAAGTTCAATATTTATTAAGAAGATTGGATTGATGATCTTACTTAAATCTCAGAAGCCAAGTTGAAGCTGTGTTTGGTCTATGGAACTGCTGACTTGTTTTTGCAGCTAACTTAATTTGTGTCATATGGTTTAGCACCAGATTTTCTAAGTTATTTTATCTTTTCAACGTCGGATACAAAAATAACGCCCTTTTGTAGATTTTACCACGATCAAACTTTATTCATTTTTTAACTCGAACTAGAATAGAGGATTAGTGAACTTTCGACCTATTAAAAGAAGCTACCGATGA

mRNA sequence

ATGGCGTTTCCTCGACTCGCCAACACCGTCACAGATTCCTTCCCATTTCTGCTCTTTTTCTCCTCTTTTTCATCGCTCCATAGCTTAACTTCTTCGATACTGTTTCAATGGAGATGGAGGCAAAAATTTTGAGAACGGCCCCATATATTCACCCGCTTCGATTCCGTTCTCGACCAAGATGTTCTTTGTTCGTACATCGGATGCCCGCAACCAGTTCGAAGTATTGCTCGAGTGTGCTGAGATGCGGCCTTCGCCCTGTTCAAGCTTCTTCCGCTTCCACCGGACCACTAGCAAGGAAGAAACGGGTGGACATGAGTGAGACCTTGACCCTCGAGGGTATAAGATTTTCATTAATCATTCAGGAGGACAGCATAATATTCAATCTTATGGAGAGAACACAGTATTGTTACAATGCCAATACTTATGACCGGGATGCTTTTGTTATGGATGGGTTTCATGGTTCTTTGGTAGAGTATATGGTCAAAGAAACTGAAAAGCTTCATGCTCAGGTGGGTAGATACAAAAGCCCTGATGAACATCCTTTCTTCCCAAATGACTTGCCGGAACCGCTATTGCCTCCAATGCAGTATCCTCAGGTACTACATCCAGCCGCAGATTTGATTAACATCAATCCAAAAGCTTTATCAAAGAGAATCCATTATGGAAAATTCGTAGCAGAAGCTAAGTTTCGAGCCTCACCGGAGGCGTACGAAGCAGCTATTAGAGCACAGGATAAGCAAAAACTGATGGATATCTTGACATACCCGATGGTGGAGGAGGTTGTGAAGAGGCGAGTGGAGATGAAAGCAACGGTTTATGGACAAGAGGTAACGACCGATGCACCGAAAGCTGAATCCCGAGCATCTTATAAGATCAAACCCAGCTTGGTTGCTGATCTATATGGGGATTGGATCATGCCATTGACTAAGGAAGTTCAAGTTCAATATTTATTAAGAAGATTGGATTGATGATCTTACTTAAATCTCAGAAGCCAAGTTGAAGCTGTGTTTGGTCTATGGAACTGCTGACTTGTTTTTGCAGCTAACTTAATTTGTGTCATATGGTTTAGCACCAGATTTTCTAAGTTATTTTATCTTTTCAACGTCGGATACAAAAATAACGCCCTTTTGTAGATTTTACCACGATCAAACTTTATTCATTTTTTAACTCGAACTAGAATAGAGGATTAGTGAACTTTCGACCTATTAAAAGAAGCTACCGATGA

Coding sequence (CDS)

ATGGAGATGGAGGCAAAAATTTTGAGAACGGCCCCATATATTCACCCGCTTCGATTCCGTTCTCGACCAAGATGTTCTTTGTTCGTACATCGGATGCCCGCAACCAGTTCGAAGTATTGCTCGAGTGTGCTGAGATGCGGCCTTCGCCCTGTTCAAGCTTCTTCCGCTTCCACCGGACCACTAGCAAGGAAGAAACGGGTGGACATGAGTGAGACCTTGACCCTCGAGGGTATAAGATTTTCATTAATCATTCAGGAGGACAGCATAATATTCAATCTTATGGAGAGAACACAGTATTGTTACAATGCCAATACTTATGACCGGGATGCTTTTGTTATGGATGGGTTTCATGGTTCTTTGGTAGAGTATATGGTCAAAGAAACTGAAAAGCTTCATGCTCAGGTGGGTAGATACAAAAGCCCTGATGAACATCCTTTCTTCCCAAATGACTTGCCGGAACCGCTATTGCCTCCAATGCAGTATCCTCAGGTACTACATCCAGCCGCAGATTTGATTAACATCAATCCAAAAGCTTTATCAAAGAGAATCCATTATGGAAAATTCGTAGCAGAAGCTAAGTTTCGAGCCTCACCGGAGGCGTACGAAGCAGCTATTAGAGCACAGGATAAGCAAAAACTGATGGATATCTTGACATACCCGATGGTGGAGGAGGTTGTGAAGAGGCGAGTGGAGATGAAAGCAACGGTTTATGGACAAGAGGTAACGACCGATGCACCGAAAGCTGAATCCCGAGCATCTTATAAGATCAAACCCAGCTTGGTTGCTGATCTATATGGGGATTGGATCATGCCATTGACTAAGGAAGTTCAAGTTCAATATTTATTAAGAAGATTGGATTGA

Protein sequence

MEMEAKILRTAPYIHPLRFRSRPRCSLFVHRMPATSSKYCSSVLRCGLRPVQASSASTGPLARKKRVDMSETLTLEGIRFSLIIQEDSIIFNLMERTQYCYNANTYDRDAFVMDGFHGSLVEYMVKETEKLHAQVGRYKSPDEHPFFPNDLPEPLLPPMQYPQVLHPAADLININPKALSKRIHYGKFVAEAKFRASPEAYEAAIRAQDKQKLMDILTYPMVEEVVKRRVEMKATVYGQEVTTDAPKAESRASYKIKPSLVADLYGDWIMPLTKEVQVQYLLRRLD

Homology

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BLAST of Cp4.1LG04g00290 vs. Swiss-Prot
Match: CM3_ARATH (Chorismate mutase 3, chloroplastic OS=Arabidopsis thaliana GN=CM3 PE=1 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.6e-67
Identity = 164/320 (51.25%), Postives = 203/320 (63.44%), Query Frame = 1


Query: 3   MEAKILRTAPYIHPLRFRSRPRCSLFVHRMPATSSKYCSSV-LRCGLRPVQASSASTGPL 62
           MEAK+L+ A Y  P    +    S  + R+   + K  S V L  G   ++ S+AS    
Sbjct: 1   MEAKLLKPAFYNSPNL--NLTNSSRLISRLSIWNDK--SKVGLSSGSLFLRLSAASPIRY 60

Query: 63  ARKK-RVDMSETLTLEGIRFSLIIQEDSIIFNLMERTQYCYNANTYDRDAFVMDGFHGSL 122
           +R   RVD SE L LE IR SLI QEDSIIFNL+ER QY YNA+TYD DAF M+GF GSL
Sbjct: 61  SRGLLRVDESEYLKLESIRHSLIRQEDSIIFNLLERAQYRYNADTYDEDAFTMEGFQGSL 120

Query: 123 VEYMVKETEKLHAQVGRYKSPDEHPFFP-------------------------------N 182
           VE+MV+ETEKLHA+V RYKSPDEHPFFP                               N
Sbjct: 121 VEFMVRETEKLHAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWN 180

Query: 183 DLPEPLLPPMQYPQV---LHPAADLININPKALSKRIHYGKFVAEAKFRASPEAYEAAIR 242
              + LLP +  P        AA    +  + LSKRIH+GKFVAEAKFR +P AYE AI+
Sbjct: 181 MYFKHLLPRLVKPGDDGNCGSAALCDTMCLQILSKRIHFGKFVAEAKFRENPAAYETAIK 240

Query: 243 AQDKQKLMDILTYPMVEEVVKRRVEMKATVYGQEVTTDAPKAESRASYKIKPSLVADLYG 287
            QD+ +LM +LTY  VEEVVK+RVE+KA ++GQ++T + P+ E+  SYKI+PSLVA LYG
Sbjct: 241 EQDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYG 300

[Close]

BLAST of Cp4.1LG04g00290 vs. Swiss-Prot
Match: CM1_ARATH (Chorismate mutase 1, chloroplastic OS=Arabidopsis thaliana GN=CM1 PE=1 SV=3)

HSP 1 Score: 194.1 bits (492), Expect = 2.1e-48
Identity = 103/153 (67.32%), Postives = 117/153 (76.47%), Query Frame = 1


Query: 32  MPATSSKY---CS----SVLRCGLRPVQASSASTGPLARKKRVDMSETLTLEGIRFSLII 91
           +P+T S +   CS    S  R G   V A     G L  KKRVD SE+LTLEGIR SLI 
Sbjct: 38  LPSTKSSFSVRCSLPQPSKPRSGTSSVHAVMTLAGSLTGKKRVDESESLTLEGIRNSLIR 97

Query: 92  QEDSIIFNLMERTQYCYNANTYDRDAFVMDGFHGSLVEYMVKETEKLHAQVGRYKSPDEH 151
           QEDSIIF L+ER +YCYNA+TYD  AF MDGF+GSLVEYMVK TEKLHA+VGR+KSPDEH
Sbjct: 98  QEDSIIFGLLERAKYCYNADTYDPTAFDMDGFNGSLVEYMVKGTEKLHAKVGRFKSPDEH 157

Query: 152 PFFPNDLPEPLLPPMQYPQVLHPAADLININPK 178
           PFFP+DLPEP+LPP+QYP+VLH AAD ININ K
Sbjct: 158 PFFPDDLPEPMLPPLQYPKVLHFAADSININKK 190

[Close]

BLAST of Cp4.1LG04g00290 vs. Swiss-Prot
Match: CM2_ARATH (Chorismate mutase 2 OS=Arabidopsis thaliana GN=CM2 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.1e-44
Identity = 108/256 (42.19%), Postives = 155/256 (60.55%), Query Frame = 1


Query: 70  SETLTLEGIRFSLIIQEDSIIFNLMERTQYCYNANTYDRDAFVMDGFHGSLVEYMVKETE 129
           S  L+L+ IR SLI QED+I+F+L+ER ++  N+  ++    +  G   SL E+ V+ETE
Sbjct: 14  SNVLSLDLIRESLIRQEDTIVFSLIERAKFPLNSPAFEESRCLDSGSFSSLTEFFVRETE 73

Query: 130 KLHAQVGRYKSPDEHPFFPNDLP-------------------------------EPLLPP 189
            + A+VGRY+ P+E+PFF  ++P                               + LLP 
Sbjct: 74  IIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKELLPL 133

Query: 190 M-------QYPQVLHPAADLININPKALSKRIHYGKFVAEAKFRASPEAYEAAIRAQDKQ 249
                    YP     A+DL  +  +ALS+RIHYGKFVAE KFR +P+ YE AIRAQD++
Sbjct: 134 FVKPGDDGNYPSTA--ASDLACL--QALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDRE 193

Query: 250 KLMDILTYPMVEEVVKRRVEMKATVYGQEVTTDAPKA-ESRASYKIKPSLVADLYGDWIM 287
            LM +LT+  VEE+VK+RV+ KA  +GQEV  ++    ES+  YK+ P L + +YG+W++
Sbjct: 194 ALMKLLTFEKVEEMVKKRVQKKAETFGQEVKFNSGYGDESKKKYKVDPLLASRIYGEWLI 253

[Close]

BLAST of Cp4.1LG04g00290 vs. Swiss-Prot
Match: CHMU_SCHPO (Probable chorismate mutase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC16E8.04c PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.6e-32
Identity = 94/255 (36.86%), Postives = 138/255 (54.12%), Query Frame = 1


Query: 69  MSETLTLEGIRFSLIIQEDSIIFNLMERTQYCYNANTYD---RDAFVMDGFHGSLVEYMV 128
           ++E L LE IR +LI QED+IIFN +ER Q+  N   Y         ++ + GS + Y++
Sbjct: 4   VNEKLKLENIRSALIRQEDTIIFNFLERAQFPRNEKVYKSGKEGCLNLENYDGSFLNYLL 63

Query: 129 KETEKLHAQVGRYKSPDEHPFFPNDLPEPLLPPMQYPQVLHPAADLININ---------- 188
            E EK++A V RY SP+E+PF  N LPEP+LP       LHP  + +N+N          
Sbjct: 64  HEEEKVYALVRRYASPEEYPFTDN-LPEPILPKFSGKFPLHP--NNVNVNSEILEYYINE 123

Query: 189 --PK-----------------------ALSKRIHYGKFVAEAKFRASPEAYEAAIRAQDK 248
             PK                       +LS+RIHYGKFVAEAK+ A+PE Y+  I A+D 
Sbjct: 124 IVPKISSPGDDFDNYGSTVVCDIRCLQSLSRRIHYGKFVAEAKYLANPEKYKKLILARDI 183

Query: 249 QKLMDILTYPMVEEVVKRRVEMKATVYGQEVTTDAPKAESRASYKIKPSLVADLYGDWIM 286
           + + + +     EE V +R+  KA  YG++         ++ S +I    VA +Y D+++
Sbjct: 184 KGIENEIVDAAQEERVLKRLHYKALNYGRDAAD-----PTKPSDRINADCVASIYKDYVI 243

[Close]

BLAST of Cp4.1LG04g00290 vs. Swiss-Prot
Match: CHMU_YEAST (Chorismate mutase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ARO7 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.0e-15
Identity = 63/251 (25.10%), Postives = 119/251 (47.41%), Query Frame = 1


Query: 73  LTLEGIRFSLIIQEDSIIFNLMERTQYCYNANTYDRD--AFVMDGFHGSLVEYMVKETEK 132
           L L+ IR  L+  EDSIIF  +ER+ +    + Y+ +     +  F GS +++ +   E 
Sbjct: 10  LNLQNIRDELVRMEDSIIFKFIERSHFATCPSVYEANHPGLEIPNFKGSFLDWALSNLEI 69

Query: 133 LHAQVGRYKSPDEHPFFPNDLPEPLLPPMQYPQVLHPAADLININPKALSKRIHYGKFVA 192
            H+++ R++SPDE PFFP+ + +  LP + YPQ+L P A  +N N K   K+++  K + 
Sbjct: 70  AHSRIRRFESPDETPFFPDKIQKSFLPSINYPQILAPYAPEVNYNDKI--KKVYIEKIIP 129

Query: 193 EAKFRASPEAYE-AAIRAQDKQKLMDI----------------LTYPMVEEVVKRRVEMK 252
               R   +     ++  +D + L  +                   P+  +++K + +++
Sbjct: 130 LISKRDGDDKNNFGSVATRDIECLQSLSRRIHFGKFVAEAKFQSDIPLYTKLIKSK-DVE 189

Query: 253 ATVYGQEVTTDAPKAESRASYK------------------IKPSLVADLYGDWIMPLTKE 287
             +  + +T  A + +                        I P  +  +Y + ++P+TKE
Sbjct: 190 GIM--KNITNSAVEEKILERLTKKAEVYGVDPTNESGERRITPEYLVKIYKEIVIPITKE 249

[Close]

BLAST of Cp4.1LG04g00290 vs. TrEMBL
Match: A0A0A0LHN7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824230 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.3e-97
Identity = 191/260 (73.46%), Postives = 206/260 (79.23%), Query Frame = 1


Query: 61  LARKKRVDMSETLTLEGIRFSLIIQEDSIIFNLMERTQYCYNANTYDRDAFVMDGFHGSL 120
           LA KKRVDMSETLTLE IRFSLI QEDSIIF L+ER QYCYN NTYDRD F MDGFHGSL
Sbjct: 7   LAMKKRVDMSETLTLESIRFSLIRQEDSIIFGLLERAQYCYNGNTYDRDTFAMDGFHGSL 66

Query: 121 VEYMVKETEKLHAQVGRYKSPDEHPFFPNDLPEPLLPPMQYPQVLHPAADLININPKA-- 180
           VEYMVKETEKLHA+ GRYKSPDEHPFFPN+LP+PLLPP+QYP+VLHP AD ININPK   
Sbjct: 67  VEYMVKETEKLHAKAGRYKSPDEHPFFPNELPQPLLPPLQYPRVLHPIADTININPKVWD 126

Query: 181 -----LSKRI---------------------------HYGKFVAEAKFRASPEAYEAAIR 240
                L  R+                           HYGKFVAEAKF+ASP+AY+AAIR
Sbjct: 127 MYFRDLIPRLVEDGDDGNCGSSAVCDTICLQALSKRIHYGKFVAEAKFQASPDAYKAAIR 186

Query: 241 AQDKQKLMDILTYPMVEEVVKRRVEMKATVYGQEVTTDAPKAESRASYKIKPSLVADLYG 287
           AQDKQKLMD+LTYP VEE VKRRVEMKATVYGQEVTTD  + E +A+YKIKPS+VADLYG
Sbjct: 187 AQDKQKLMDMLTYPTVEETVKRRVEMKATVYGQEVTTD-EEGELQAAYKIKPSVVADLYG 246

[Close]

BLAST of Cp4.1LG04g00290 vs. TrEMBL
Match: Q30CZ6_FAGSY (Putative chorismate mutase OS=Fagus sylvatica PE=2 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 4.1e-96
Identity = 199/324 (61.42%), Postives = 233/324 (71.91%), Query Frame = 1


Query: 3   MEAKILRTAPYI-----HPLRFRSRPRCSLFVHRMPATSSKYC-SSVLRCGLRPVQASSA 62
           MEAK+L  A        H  RF SRP     +      S ++  SS+ + G + VQA++ 
Sbjct: 1   MEAKLLGAASSAVTAPPHASRF-SRPISRFVLQTRLNFSFRFQGSSLAKRGFQSVQAAAT 60

Query: 63  STGPLARKKRVDMSETLTLEGIRFSLIIQEDSIIFNLMERTQYCYNANTYDRDAFVMDGF 122
           S G L+ KKRVD+SE LTL+GIR SLI QEDSIIF+L+ER QYCYNA+TY+ +AF MDGF
Sbjct: 61  SIGSLSIKKRVDVSENLTLDGIRISLIRQEDSIIFSLLERAQYCYNADTYNPNAFSMDGF 120

Query: 123 HGSLVEYMVKETEKLHAQVGRYKSPDEHPFFPNDLPEPLLPPMQYPQVLHPAADLININP 182
           HGSLVEYMVKETEKLHAQVGRYKSPDEHPFFP+DLP+PLLPP+QYPQVLHP AD ININ 
Sbjct: 121 HGSLVEYMVKETEKLHAQVGRYKSPDEHPFFPDDLPDPLLPPLQYPQVLHPFADSININK 180

Query: 183 ----------------------------------KALSKRIHYGKFVAEAKFRASPEAYE 242
                                             +ALSKR+HYGKFVAEAKFRASP+AYE
Sbjct: 181 KVWDMYFRDLIPRLVEEGDDGNCGSTAVCDTMCLQALSKRMHYGKFVAEAKFRASPDAYE 240

Query: 243 AAIRAQDKQKLMDILTYPMVEEVVKRRVEMKATVYGQEVTTDAPKAESRASYKIKPSLVA 287
           AAIRAQD++KLMD+LTY  VEE +++RVEMKA  Y QEVT +  + E+   YKI+PSLVA
Sbjct: 241 AAIRAQDRKKLMDMLTYSEVEEAIRKRVEMKAKTYAQEVTVNVEEDEAEPVYKIEPSLVA 300

[Close]

BLAST of Cp4.1LG04g00290 vs. TrEMBL
Match: D2CSU4_PETHY (Chorismate mutase 1 OS=Petunia hybrida GN=CM1 PE=2 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.4e-91
Identity = 182/280 (65.00%), Postives = 205/280 (73.21%), Query Frame = 1


Query: 41  SSVLRCGLRPVQASSASTGPLARKKRVDMSETLTLEGIRFSLIIQEDSIIFNLMERTQYC 100
           SS ++ G+RP+QAS+ S G L  K RVD +E+ TL+GIR SLI QEDSIIF+L+ER QYC
Sbjct: 46  SSSIKHGIRPLQASATSLG-LGNKNRVDETESYTLDGIRHSLIRQEDSIIFSLVERAQYC 105

Query: 101 YNANTYDRDAFVMDGFHGSLVEYMVKETEKLHAQVGRYKSPDEHPFFPNDLPEPLLPPMQ 160
           YNA TYD D F MDGFHGSLVEY+V+ETEKLHA VGRYKSPDEHPFFP  LPEP+LPPMQ
Sbjct: 106 YNAETYDPDVFAMDGFHGSLVEYIVRETEKLHATVGRYKSPDEHPFFPKVLPEPVLPPMQ 165

Query: 161 YPQVLHPAADLININPK----------------------------------ALSKRIHYG 220
           YP+VLHP AD ININ K                                  ALSKRIHYG
Sbjct: 166 YPKVLHPIADSININVKIWEMYFENLLPRLVKEGDDGNYGSTAVCDTICVQALSKRIHYG 225

Query: 221 KFVAEAKFRASPEAYEAAIRAQDKQKLMDILTYPMVEEVVKRRVEMKATVYGQEVTTDAP 280
           KFVAEAK+RASPE Y AAIRAQD+  LMD+LTYP VEE +KRRVE+K   YGQE+  + P
Sbjct: 226 KFVAEAKYRASPEVYNAAIRAQDRNGLMDLLTYPAVEEAIKRRVEIKTRTYGQELHINGP 285

Query: 281 KAESRASYKIKPSLVADLYGDWIMPLTKEVQVQYLLRRLD 287
           +      YKIKPSLVA+LYGDWIMPLTKEVQVQYLLRRLD
Sbjct: 286 ENGGDPVYKIKPSLVAELYGDWIMPLTKEVQVQYLLRRLD 324

[Close]

BLAST of Cp4.1LG04g00290 vs. TrEMBL
Match: A0A0V0HYJ9_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 6.4e-89
Identity = 187/324 (57.72%), Postives = 225/324 (69.44%), Query Frame = 1


Query: 3   MEAKILR--TAPYIHPLRFRSRPRCSLFVH-RMPATSSKYC---SSVLRCGLRPVQASSA 62
           MEA++L+  + P   PL        +L  H ++P    K+    S +++ G+RP+QA +A
Sbjct: 1   MEAQLLKLSSTPITTPLITNYSRNNTLLPHQKLPKHFLKFQLSNSGIIKHGIRPIQAFAA 60

Query: 63  STGPLARKKRVDMSETLTLEGIRFSLIIQEDSIIFNLMERTQYCYNANTYDRDAFVMDGF 122
           S G +   KR+D +E+ TL+GIR SLI QEDSIIF+L+ER QYC+NA TYD D FVMDGF
Sbjct: 61  SLGEI---KRIDETESYTLDGIRNSLIRQEDSIIFSLVERAQYCFNAETYDPDVFVMDGF 120

Query: 123 HGSLVEYMVKETEKLHAQVGRYKSPDEHPFFPNDLPEPLLPPMQYPQVLHPAADLININP 182
           HGSLVEY+VKETEKLHA+VGRY SPDEHPFFP  LPEP+LPPMQYP+VLH AAD ININ 
Sbjct: 121 HGSLVEYIVKETEKLHAKVGRYTSPDEHPFFPKALPEPMLPPMQYPKVLHSAADSININV 180

Query: 183 ----------------------------------KALSKRIHYGKFVAEAKFRASPEAYE 242
                                             +ALSKRIHYGKFVAEAKFRASP+ Y+
Sbjct: 181 TIWEMYFKKLLPRLVKEGNDGNFGSTAVCDTICLQALSKRIHYGKFVAEAKFRASPDVYK 240

Query: 243 AAIRAQDKQKLMDILTYPMVEEVVKRRVEMKATVYGQEVTTDAPKAESRASYKIKPSLVA 287
           AAI+AQD+  LMD+LTYP VEE +K RVEMK   YGQE+  + P+      YKIKPSLVA
Sbjct: 241 AAIKAQDRNGLMDLLTYPTVEEAIKNRVEMKTKTYGQEL-NNGPENVGDPVYKIKPSLVA 300

[Close]

BLAST of Cp4.1LG04g00290 vs. TrEMBL
Match: A0A0V0HTG8_SOLCH (Putative chorismate mutase 1, chloroplastic-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.4e-88
Identity = 186/324 (57.41%), Postives = 225/324 (69.44%), Query Frame = 1


Query: 3   MEAKILR--TAPYIHPLRFRSRPRCSLFVH-RMPATSSKYC---SSVLRCGLRPVQASSA 62
           MEA++L+  + P   PL        +L  H ++P    K+    S +++ G+RP+QA +A
Sbjct: 1   MEAQLLKLSSTPITTPLITNYSRNNTLLPHQKLPKHFLKFQLSNSGIIKHGIRPIQAFAA 60

Query: 63  STGPLARKKRVDMSETLTLEGIRFSLIIQEDSIIFNLMERTQYCYNANTYDRDAFVMDGF 122
           S G +   KR+D +E+ TL+GIR SLI QEDSIIF+L+ER QYC+NA TYD D FVMDGF
Sbjct: 61  SLGEI---KRIDETESYTLDGIRNSLIRQEDSIIFSLVERAQYCFNAETYDPDVFVMDGF 120

Query: 123 HGSLVEYMVKETEKLHAQVGRYKSPDEHPFFPNDLPEPLLPPMQYPQVLHPAADLININP 182
           HGSLVEY+VKETEKLHA+VGRY SPDEHPFFP  LPEP+LPPMQYP+VLH AAD ININ 
Sbjct: 121 HGSLVEYIVKETEKLHAKVGRYTSPDEHPFFPKALPEPMLPPMQYPKVLHSAADSININV 180

Query: 183 ----------------------------------KALSKRIHYGKFVAEAKFRASPEAYE 242
                                             +ALSKRIHYGKFVAEAKFRASP+ Y+
Sbjct: 181 TIWEMYFKKLLPRLVKEGNDGNFGSTAVCDTICLQALSKRIHYGKFVAEAKFRASPDVYK 240

Query: 243 AAIRAQDKQKLMDILTYPMVEEVVKRRVEMKATVYGQEVTTDAPKAESRASYKIKPSLVA 287
           AAI+AQD+  LMD+LTYP VEE +K RVEMK   YGQE+  + P+      YKIKPSLVA
Sbjct: 241 AAIKAQDRDGLMDLLTYPTVEEAIKNRVEMKTKTYGQEL-NNGPENVGDPVYKIKPSLVA 300

[Close]

BLAST of Cp4.1LG04g00290 vs. TAIR10
Match: AT1G69370.1 (AT1G69370.1 chorismate mutase 3)

HSP 1 Score: 256.9 bits (655), Expect = 1.5e-68
Identity = 164/320 (51.25%), Postives = 203/320 (63.44%), Query Frame = 1


Query: 3   MEAKILRTAPYIHPLRFRSRPRCSLFVHRMPATSSKYCSSV-LRCGLRPVQASSASTGPL 62
           MEAK+L+ A Y  P    +    S  + R+   + K  S V L  G   ++ S+AS    
Sbjct: 1   MEAKLLKPAFYNSPNL--NLTNSSRLISRLSIWNDK--SKVGLSSGSLFLRLSAASPIRY 60

Query: 63  ARKK-RVDMSETLTLEGIRFSLIIQEDSIIFNLMERTQYCYNANTYDRDAFVMDGFHGSL 122
           +R   RVD SE L LE IR SLI QEDSIIFNL+ER QY YNA+TYD DAF M+GF GSL
Sbjct: 61  SRGLLRVDESEYLKLESIRHSLIRQEDSIIFNLLERAQYRYNADTYDEDAFTMEGFQGSL 120

Query: 123 VEYMVKETEKLHAQVGRYKSPDEHPFFP-------------------------------N 182
           VE+MV+ETEKLHA+V RYKSPDEHPFFP                               N
Sbjct: 121 VEFMVRETEKLHAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWN 180

Query: 183 DLPEPLLPPMQYPQV---LHPAADLININPKALSKRIHYGKFVAEAKFRASPEAYEAAIR 242
              + LLP +  P        AA    +  + LSKRIH+GKFVAEAKFR +P AYE AI+
Sbjct: 181 MYFKHLLPRLVKPGDDGNCGSAALCDTMCLQILSKRIHFGKFVAEAKFRENPAAYETAIK 240

Query: 243 AQDKQKLMDILTYPMVEEVVKRRVEMKATVYGQEVTTDAPKAESRASYKIKPSLVADLYG 287
            QD+ +LM +LTY  VEEVVK+RVE+KA ++GQ++T + P+ E+  SYKI+PSLVA LYG
Sbjct: 241 EQDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYG 300

[Close]

BLAST of Cp4.1LG04g00290 vs. TAIR10
Match: AT3G29200.1 (AT3G29200.1 chorismate mutase 1)

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-49
Identity = 103/153 (67.32%), Postives = 117/153 (76.47%), Query Frame = 1


Query: 32  MPATSSKY---CS----SVLRCGLRPVQASSASTGPLARKKRVDMSETLTLEGIRFSLII 91
           +P+T S +   CS    S  R G   V A     G L  KKRVD SE+LTLEGIR SLI 
Sbjct: 38  LPSTKSSFSVRCSLPQPSKPRSGTSSVHAVMTLAGSLTGKKRVDESESLTLEGIRNSLIR 97

Query: 92  QEDSIIFNLMERTQYCYNANTYDRDAFVMDGFHGSLVEYMVKETEKLHAQVGRYKSPDEH 151
           QEDSIIF L+ER +YCYNA+TYD  AF MDGF+GSLVEYMVK TEKLHA+VGR+KSPDEH
Sbjct: 98  QEDSIIFGLLERAKYCYNADTYDPTAFDMDGFNGSLVEYMVKGTEKLHAKVGRFKSPDEH 157

Query: 152 PFFPNDLPEPLLPPMQYPQVLHPAADLININPK 178
           PFFP+DLPEP+LPP+QYP+VLH AAD ININ K
Sbjct: 158 PFFPDDLPEPMLPPLQYPKVLHFAADSININKK 190

[Close]

BLAST of Cp4.1LG04g00290 vs. TAIR10
Match: AT5G10870.1 (AT5G10870.1 chorismate mutase 2)

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-45
Identity = 108/256 (42.19%), Postives = 155/256 (60.55%), Query Frame = 1


Query: 70  SETLTLEGIRFSLIIQEDSIIFNLMERTQYCYNANTYDRDAFVMDGFHGSLVEYMVKETE 129
           S  L+L+ IR SLI QED+I+F+L+ER ++  N+  ++    +  G   SL E+ V+ETE
Sbjct: 14  SNVLSLDLIRESLIRQEDTIVFSLIERAKFPLNSPAFEESRCLDSGSFSSLTEFFVRETE 73

Query: 130 KLHAQVGRYKSPDEHPFFPNDLP-------------------------------EPLLPP 189
            + A+VGRY+ P+E+PFF  ++P                               + LLP 
Sbjct: 74  IIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKELLPL 133

Query: 190 M-------QYPQVLHPAADLININPKALSKRIHYGKFVAEAKFRASPEAYEAAIRAQDKQ 249
                    YP     A+DL  +  +ALS+RIHYGKFVAE KFR +P+ YE AIRAQD++
Sbjct: 134 FVKPGDDGNYPSTA--ASDLACL--QALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDRE 193

Query: 250 KLMDILTYPMVEEVVKRRVEMKATVYGQEVTTDAPKA-ESRASYKIKPSLVADLYGDWIM 287
            LM +LT+  VEE+VK+RV+ KA  +GQEV  ++    ES+  YK+ P L + +YG+W++
Sbjct: 194 ALMKLLTFEKVEEMVKKRVQKKAETFGQEVKFNSGYGDESKKKYKVDPLLASRIYGEWLI 253

[Close]

BLAST of Cp4.1LG04g00290 vs. NCBI nr
Match: gi|659085325|ref|XP_008443360.1| (PREDICTED: chorismate mutase 1, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 415.6 bits (1067), Expect = 6.9e-113
Identity = 223/322 (69.25%), Postives = 248/322 (77.02%), Query Frame = 1


Query: 3   MEAKILRTAPYIHPLRFRS---RPRCSLFV-HRMPATSSKYCSSVLRCGLRPVQASSAST 62
           MEAK+L  +P +HP+RFRS   R  C+  + +R  +  S Y SS++R G  PV+ASSAST
Sbjct: 1   MEAKLLGISPSLHPVRFRSEVSRSSCAFSIQNRTRSRCSMYRSSMMRWGFPPVKASSAST 60

Query: 63  GPLARKKRVDMSETLTLEGIRFSLIIQEDSIIFNLMERTQYCYNANTYDRDAFVMDGFHG 122
             LA KKRVDMSETLTLE IRFSLI QEDSIIF L+ER QYCYNANTYDRD F MDGFHG
Sbjct: 61  RLLAMKKRVDMSETLTLESIRFSLIRQEDSIIFGLLERAQYCYNANTYDRDTFAMDGFHG 120

Query: 123 SLVEYMVKETEKLHAQVGRYKSPDEHPFFPNDLPEPLLPPMQYPQVLHPAADLIN----- 182
           SLVEYMVKETEKLHA+ GRYKSPDEHPFFPNDLP+PLLPP+QYP+VLHP AD IN     
Sbjct: 121 SLVEYMVKETEKLHAKAGRYKSPDEHPFFPNDLPQPLLPPLQYPRVLHPIADSININPKV 180

Query: 183 -----------------------------INPKALSKRIHYGKFVAEAKFRASPEAYEAA 242
                                        I  +ALSKRIHYGKFVAEAKF+ASP+AYEAA
Sbjct: 181 WDMYFRDLIPRLVEDGDDGNCGSSAVCDTICLQALSKRIHYGKFVAEAKFQASPDAYEAA 240

Query: 243 IRAQDKQKLMDILTYPMVEEVVKRRVEMKATVYGQEVTTDAPKAESRASYKIKPSLVADL 287
           I+AQDKQKLMD+LTYP VEE VKRRVEMKATVYGQEVTTD  K E +A+YKIKPS+VADL
Sbjct: 241 IKAQDKQKLMDMLTYPTVEETVKRRVEMKATVYGQEVTTDEVKGELQAAYKIKPSVVADL 300

[Close]

BLAST of Cp4.1LG04g00290 vs. NCBI nr
Match: gi|449437810|ref|XP_004136683.1| (PREDICTED: chorismate mutase 1, chloroplastic-like isoform X1 [Cucumis sativus])

HSP 1 Score: 413.3 bits (1061), Expect = 3.4e-112
Identity = 222/322 (68.94%), Postives = 246/322 (76.40%), Query Frame = 1


Query: 3   MEAKILRTAPYIHPLRFRS---RPRCSLFVHRM-PATSSKYCSSVLRCGLRPVQASSAST 62
           MEAK+L  +P +HP+RFRS   R  C+  +    PA  S YCSS++R G RP +ASSAST
Sbjct: 1   MEAKVLGISPSLHPVRFRSEISRSSCAFPIQNWTPARCSMYCSSMMRWGFRPFKASSAST 60

Query: 63  GPLARKKRVDMSETLTLEGIRFSLIIQEDSIIFNLMERTQYCYNANTYDRDAFVMDGFHG 122
             LA KKRVDMSETLTLE IRFSLI QEDSIIF L+ER QYCYN NTYDRD F MDGFHG
Sbjct: 61  RLLAMKKRVDMSETLTLESIRFSLIRQEDSIIFGLLERAQYCYNGNTYDRDTFAMDGFHG 120

Query: 123 SLVEYMVKETEKLHAQVGRYKSPDEHPFFPNDLPEPLLPPMQYPQVLHPAADLININPKA 182
           SLVEYMVKETEKLHA+ GRYKSPDEHPFFPN+LP+PLLPP+QYP+VLHP AD ININPK 
Sbjct: 121 SLVEYMVKETEKLHAKAGRYKSPDEHPFFPNELPQPLLPPLQYPRVLHPIADTININPKV 180

Query: 183 -------LSKRI---------------------------HYGKFVAEAKFRASPEAYEAA 242
                  L  R+                           HYGKFVAEAKF+ASP+AY+AA
Sbjct: 181 WDMYFRDLIPRLVEDGDDGNCGSSAVCDTICLQALSKRIHYGKFVAEAKFQASPDAYKAA 240

Query: 243 IRAQDKQKLMDILTYPMVEEVVKRRVEMKATVYGQEVTTDAPKAESRASYKIKPSLVADL 287
           IRAQDKQKLMD+LTYP VEE VKRRVEMKATVYGQEVTTD  + E +A+YKIKPS+VADL
Sbjct: 241 IRAQDKQKLMDMLTYPTVEETVKRRVEMKATVYGQEVTTD-EEGELQAAYKIKPSVVADL 300

[Close]

BLAST of Cp4.1LG04g00290 vs. NCBI nr
Match: gi|659085327|ref|XP_008443361.1| (PREDICTED: chorismate mutase 1, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 374.0 bits (959), Expect = 2.3e-100
Identity = 194/260 (74.62%), Postives = 208/260 (80.00%), Query Frame = 1


Query: 61  LARKKRVDMSETLTLEGIRFSLIIQEDSIIFNLMERTQYCYNANTYDRDAFVMDGFHGSL 120
           LA KKRVDMSETLTLE IRFSLI QEDSIIF L+ER QYCYNANTYDRD F MDGFHGSL
Sbjct: 7   LAMKKRVDMSETLTLESIRFSLIRQEDSIIFGLLERAQYCYNANTYDRDTFAMDGFHGSL 66

Query: 121 VEYMVKETEKLHAQVGRYKSPDEHPFFPNDLPEPLLPPMQYPQVLHPAADLIN------- 180
           VEYMVKETEKLHA+ GRYKSPDEHPFFPNDLP+PLLPP+QYP+VLHP AD IN       
Sbjct: 67  VEYMVKETEKLHAKAGRYKSPDEHPFFPNDLPQPLLPPLQYPRVLHPIADSININPKVWD 126

Query: 181 ---------------------------INPKALSKRIHYGKFVAEAKFRASPEAYEAAIR 240
                                      I  +ALSKRIHYGKFVAEAKF+ASP+AYEAAI+
Sbjct: 127 MYFRDLIPRLVEDGDDGNCGSSAVCDTICLQALSKRIHYGKFVAEAKFQASPDAYEAAIK 186

Query: 241 AQDKQKLMDILTYPMVEEVVKRRVEMKATVYGQEVTTDAPKAESRASYKIKPSLVADLYG 287
           AQDKQKLMD+LTYP VEE VKRRVEMKATVYGQEVTTD  K E +A+YKIKPS+VADLYG
Sbjct: 187 AQDKQKLMDMLTYPTVEETVKRRVEMKATVYGQEVTTDEVKGELQAAYKIKPSVVADLYG 246

[Close]

BLAST of Cp4.1LG04g00290 vs. NCBI nr
Match: gi|778685432|ref|XP_011652218.1| (PREDICTED: chorismate mutase 1, chloroplastic-like isoform X2 [Cucumis sativus])

HSP 1 Score: 364.4 bits (934), Expect = 1.8e-97
Identity = 191/260 (73.46%), Postives = 206/260 (79.23%), Query Frame = 1


Query: 61  LARKKRVDMSETLTLEGIRFSLIIQEDSIIFNLMERTQYCYNANTYDRDAFVMDGFHGSL 120
           LA KKRVDMSETLTLE IRFSLI QEDSIIF L+ER QYCYN NTYDRD F MDGFHGSL
Sbjct: 7   LAMKKRVDMSETLTLESIRFSLIRQEDSIIFGLLERAQYCYNGNTYDRDTFAMDGFHGSL 66

Query: 121 VEYMVKETEKLHAQVGRYKSPDEHPFFPNDLPEPLLPPMQYPQVLHPAADLININPKA-- 180
           VEYMVKETEKLHA+ GRYKSPDEHPFFPN+LP+PLLPP+QYP+VLHP AD ININPK   
Sbjct: 67  VEYMVKETEKLHAKAGRYKSPDEHPFFPNELPQPLLPPLQYPRVLHPIADTININPKVWD 126

Query: 181 -----LSKRI---------------------------HYGKFVAEAKFRASPEAYEAAIR 240
                L  R+                           HYGKFVAEAKF+ASP+AY+AAIR
Sbjct: 127 MYFRDLIPRLVEDGDDGNCGSSAVCDTICLQALSKRIHYGKFVAEAKFQASPDAYKAAIR 186

Query: 241 AQDKQKLMDILTYPMVEEVVKRRVEMKATVYGQEVTTDAPKAESRASYKIKPSLVADLYG 287
           AQDKQKLMD+LTYP VEE VKRRVEMKATVYGQEVTTD  + E +A+YKIKPS+VADLYG
Sbjct: 187 AQDKQKLMDMLTYPTVEETVKRRVEMKATVYGQEVTTD-EEGELQAAYKIKPSVVADLYG 246

[Close]

BLAST of Cp4.1LG04g00290 vs. NCBI nr
Match: gi|76782202|gb|ABA54871.1| (putative chorismate mutase [Fagus sylvatica])

HSP 1 Score: 359.4 bits (921), Expect = 5.9e-96
Identity = 199/324 (61.42%), Postives = 233/324 (71.91%), Query Frame = 1


Query: 3   MEAKILRTAPYI-----HPLRFRSRPRCSLFVHRMPATSSKYC-SSVLRCGLRPVQASSA 62
           MEAK+L  A        H  RF SRP     +      S ++  SS+ + G + VQA++ 
Sbjct: 1   MEAKLLGAASSAVTAPPHASRF-SRPISRFVLQTRLNFSFRFQGSSLAKRGFQSVQAAAT 60

Query: 63  STGPLARKKRVDMSETLTLEGIRFSLIIQEDSIIFNLMERTQYCYNANTYDRDAFVMDGF 122
           S G L+ KKRVD+SE LTL+GIR SLI QEDSIIF+L+ER QYCYNA+TY+ +AF MDGF
Sbjct: 61  SIGSLSIKKRVDVSENLTLDGIRISLIRQEDSIIFSLLERAQYCYNADTYNPNAFSMDGF 120

Query: 123 HGSLVEYMVKETEKLHAQVGRYKSPDEHPFFPNDLPEPLLPPMQYPQVLHPAADLININP 182
           HGSLVEYMVKETEKLHAQVGRYKSPDEHPFFP+DLP+PLLPP+QYPQVLHP AD ININ 
Sbjct: 121 HGSLVEYMVKETEKLHAQVGRYKSPDEHPFFPDDLPDPLLPPLQYPQVLHPFADSININK 180

Query: 183 ----------------------------------KALSKRIHYGKFVAEAKFRASPEAYE 242
                                             +ALSKR+HYGKFVAEAKFRASP+AYE
Sbjct: 181 KVWDMYFRDLIPRLVEEGDDGNCGSTAVCDTMCLQALSKRMHYGKFVAEAKFRASPDAYE 240

Query: 243 AAIRAQDKQKLMDILTYPMVEEVVKRRVEMKATVYGQEVTTDAPKAESRASYKIKPSLVA 287
           AAIRAQD++KLMD+LTY  VEE +++RVEMKA  Y QEVT +  + E+   YKI+PSLVA
Sbjct: 241 AAIRAQDRKKLMDMLTYSEVEEAIRKRVEMKAKTYAQEVTVNVEEDEAEPVYKIEPSLVA 300

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g00290 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CM3_ARATH	2.6e-67	51.25	Chorismate mutase 3, chloroplastic OS=Arabidopsis thaliana GN=CM3 PE=1 SV=1	[more]
CM1_ARATH	2.1e-48	67.32	Chorismate mutase 1, chloroplastic OS=Arabidopsis thaliana GN=CM1 PE=1 SV=3	[more]
CM2_ARATH	3.1e-44	42.19	Chorismate mutase 2 OS=Arabidopsis thaliana GN=CM2 PE=1 SV=1	[more]
CHMU_SCHPO	1.6e-32	36.86	Probable chorismate mutase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843...	[more]
CHMU_YEAST	1.0e-15	25.10	Chorismate mutase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AR...	[more]

BLAST of Cp4.1LG04g00290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHN7_CUCSA	1.3e-97	73.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824230 PE=4 SV=1	[more]
Q30CZ6_FAGSY	4.1e-96	61.42	Putative chorismate mutase OS=Fagus sylvatica PE=2 SV=1	[more]
D2CSU4_PETHY	1.4e-91	65.00	Chorismate mutase 1 OS=Petunia hybrida GN=CM1 PE=2 SV=1	[more]
A0A0V0HYJ9_SOLCH	6.4e-89	57.72	Putative ovule protein OS=Solanum chacoense PE=4 SV=1	[more]
A0A0V0HTG8_SOLCH	1.4e-88	57.41	Putative chorismate mutase 1, chloroplastic-like OS=Solanum chacoense PE=4 SV=1	[more]

BLAST of Cp4.1LG04g00290 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G69370.1	1.5e-68	51.25	chorismate mutase 3	[more]
AT3G29200.1	1.2e-49	67.32	chorismate mutase 1	[more]
AT5G10870.1	1.7e-45	42.19	chorismate mutase 2	[more]

BLAST of Cp4.1LG04g00290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085325\|ref\|XP_008443360.1\|	6.9e-113	69.25	PREDICTED: chorismate mutase 1, chloroplastic-like isoform X1 [Cucumis melo]	[more]
gi\|449437810\|ref\|XP_004136683.1\|	3.4e-112	68.94	PREDICTED: chorismate mutase 1, chloroplastic-like isoform X1 [Cucumis sativus]	[more]
gi\|659085327\|ref\|XP_008443361.1\|	2.3e-100	74.62	PREDICTED: chorismate mutase 1, chloroplastic-like isoform X2 [Cucumis melo]	[more]
gi\|778685432\|ref\|XP_011652218.1\|	1.8e-97	73.46	PREDICTED: chorismate mutase 1, chloroplastic-like isoform X2 [Cucumis sativus]	[more]
gi\|76782202\|gb\|ABA54871.1\|	5.9e-96	61.42	putative chorismate mutase [Fagus sylvatica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0046417	chorismate metabolic process
GO:0009073	aromatic amino acid family biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004106	chorismate mutase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR020822	Chorismate mutase, type II
IPR008238	Chorismate_mutase_AroQ_euk

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046417	chorismate metabolic process
biological_process	GO:0009094	L-phenylalanine biosynthetic process
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006571	tyrosine biosynthetic process
biological_process	GO:0006007	glucose catabolic process
biological_process	GO:0019852	L-ascorbic acid metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005829	cytosol
molecular_function	GO:0004106	chorismate mutase activity
molecular_function	GO:0016688	L-ascorbate peroxidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g00290.1	Cp4.1LG04g00290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008238	Chorismate mutase, AroQ class, eukaryotic type	GENE3D	G3DSA:1.10.590.10		coord: 66..177 score: 4.8E-42coord: 178..286 score: 1.6
IPR008238	Chorismate mutase, AroQ class, eukaryotic type	PANTHER	PTHR21145	CHORISMATE MUTASE	coord: 13..286 score: 3.3E
IPR008238	Chorismate mutase, AroQ class, eukaryotic type	PROFILE	PS51169	CHORISMATE_MUT_3	coord: 66..286 score: 69
IPR020822	Chorismate mutase, type II	unknown	SSF48600	Chorismate mutase II	coord: 66..286 score: 4.12
None	No IPR available	PANTHER	PTHR21145:SF0	CHORISMATE MUTASE	coord: 13..286 score: 3.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG04g00290	Cucsa.338470	Cucumber (Gy14) v1	cgycpeB0895
Cp4.1LG04g00290	CmaCh11G011580	Cucurbita maxima (Rimu)	cmacpeB147
Cp4.1LG04g00290	CmoCh11G012000	Cucurbita moschata (Rifu)	cmocpeB127
Cp4.1LG04g00290	Cla016969	Watermelon (97103) v1	cpewmB640
Cp4.1LG04g00290	Csa3G824230	Cucumber (Chinese Long) v2	cpecuB674
Cp4.1LG04g00290	MELO3C009834	Melon (DHL92) v3.5.1	cpemeB630
Cp4.1LG04g00290	ClCG10G015470	Watermelon (Charleston Gray)	cpewcgB584
Cp4.1LG04g00290	CSPI03G38590	Wild cucumber (PI 183967)	cpecpiB677
Cp4.1LG04g00290	Lsi03G015230	Bottle gourd (USVL1VR-Ls)	cpelsiB546
Cp4.1LG04g00290	MELO3C009834.2	Melon (DHL92) v3.6.1	cpemedB751
Cp4.1LG04g00290	CsaV3_3G041000	Cucumber (Chinese Long) v3	cpecucB0843
Cp4.1LG04g00290	Bhi11G002440	Wax gourd	cpewgoB0827
Cp4.1LG04g00290	CsGy3G036130	Cucumber (Gy14) v2	cgybcpeB420
Cp4.1LG04g00290	Carg26976	Silver-seed gourd	carcpeB1154

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None