Cp4.1LG03g17890 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g17890
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPhototropic-responsive NPH3 family protein, putative
LocationCp4.1LG03 : 12459842 .. 12460246 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAGTGCAGCATCAATGGGAACCGATAGGAGCTCCGGTGGAATATACAGAGCTATAGATATATATCTGGACAAGCATAGCTACCTGACAGAATCTGAGAGAGAAGAAGTGTGCAGAGGGCTGGACTACCATAGGATGTCAGCTGAAGTTTGTGAACACGCAGCCAAGAACCAGAAAATTCCATTAAGAATCGTGGTCCAAGTGCTAGTTTTGGTGCAATTACAACTTCGCTATGCAATCACAAAGGAAATGCAGGGTTCTGACAACAAATTGATACAGGACGAGGTTGAAAGTGATGGAGGAGTGTTGGCCTTAAGTGAAGGTTTAGTAAAAAATGAAATGGAGAAAATGAACAATAAGGTGATGGAGCTGGAGAAAGAGTGTCATATGATGAGGAAATAG

mRNA sequence

ATGTCAAGTGCAGCATCAATGGGAACCGATAGGAGCTCCGGTGGAATATACAGAGCTATAGATATATATCTGGACAAGCATAGCTACCTGACAGAATCTGAGAGAGAAGAAGTGTGCAGAGGGCTGGACTACCATAGGATGTCAGCTGAAGTTTGTGAACACGCAGCCAAGAACCAGAAAATTCCATTAAGAATCGTGGTCCAAGTGCTAGTTTTGGTGCAATTACAACTTCGCTATGCAATCACAAAGGAAATGCAGGGTTCTGACAACAAATTGATACAGGACGAGGTTGAAAGTGATGGAGGAGTGTTGGCCTTAAGTGAAGGTTTAGTAAAAAATGAAATGGAGAAAATGAACAATAAGGTGATGGAGCTGGAGAAAGAGTGTCATATGATGAGGAAATAG

Coding sequence (CDS)

ATGTCAAGTGCAGCATCAATGGGAACCGATAGGAGCTCCGGTGGAATATACAGAGCTATAGATATATATCTGGACAAGCATAGCTACCTGACAGAATCTGAGAGAGAAGAAGTGTGCAGAGGGCTGGACTACCATAGGATGTCAGCTGAAGTTTGTGAACACGCAGCCAAGAACCAGAAAATTCCATTAAGAATCGTGGTCCAAGTGCTAGTTTTGGTGCAATTACAACTTCGCTATGCAATCACAAAGGAAATGCAGGGTTCTGACAACAAATTGATACAGGACGAGGTTGAAAGTGATGGAGGAGTGTTGGCCTTAAGTGAAGGTTTAGTAAAAAATGAAATGGAGAAAATGAACAATAAGGTGATGGAGCTGGAGAAAGAGTGTCATATGATGAGGAAATAG

Protein sequence

MSSAASMGTDRSSGGIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQKIPLRIVVQVLVLVQLQLRYAITKEMQGSDNKLIQDEVESDGGVLALSEGLVKNEMEKMNNKVMELEKECHMMRK
Homology
[Close]
BLAST of Cp4.1LG03g17890 vs. Swiss-Prot
Match: Y5758_ARATH (BTB/POZ domain-containing protein At5g17580 OS=Arabidopsis thaliana GN=At5g17580 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.9e-22
Identity = 61/128 (47.66%), Postives = 86/128 (67.19%), Query Frame = 1 

Query: 1   MSSAASMGTDRSSGGIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQK 60
           M+ A S G    S GIYRAID++L+ H YLTESE+ EVC+ L+  ++S E  E AAKNQK
Sbjct: 367 MTVAVSQGILSYSDGIYRAIDVFLESHRYLTESEKMEVCKVLECGKLSQEGFERAAKNQK 426

Query: 61  IPLRIVVQVLVLVQLQLRYAITKEMQGSDNKLIQDEVESDGGVLALSEGLVKNEMEKMNN 120
           +PLRIVV VL + QLQ+R  + KE++G + K+ ++E E       +     ++EMEKM+N
Sbjct: 427 LPLRIVVNVLCVSQLQIRDTVAKEIKGMEEKVDEEEEEE------IEVSSDEDEMEKMSN 486

Query: 121 KVMELEKE 129
           K++ LE E
Sbjct: 487 KLLGLEIE 488

[Close]
BLAST of Cp4.1LG03g17890 vs. Swiss-Prot
Match: Y3351_ARATH (BTB/POZ domain-containing protein At3g03510 OS=Arabidopsis thaliana GN=At3g03510 PE=2 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 3.9e-18
Identity = 61/138 (44.20%), Postives = 87/138 (63.04%), Query Frame = 1 

Query: 4   AASMGTDRSSGGIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQKIPL 63
           AAS      S GIYRAID+YL++H  L ESE+ E CR L   ++S E CEHA+KN+K+PL
Sbjct: 342 AASCDVLSYSDGIYRAIDVYLERHRDLIESEKMEACRFLHCKKLSPEACEHASKNEKLPL 401

Query: 64  RIVVQVLVLVQLQLRYAITKEMQG----SDNKLIQDEVESDGGVLALSEGLVKNEME--- 123
           RIV+QVL + Q+Q+R  + +EM+G    ++N++  DEVES      +S+ L+K E+E   
Sbjct: 402 RIVMQVLFVSQMQIRDKVAREMKGVVERTENQV--DEVES------MSKKLLKLEIEPDY 461

Query: 124 KMNNKVMELEKECHMMRK 135
               K+  LE   H  +K
Sbjct: 462 MKKRKIENLECVVHCEKK 471

[Close]
BLAST of Cp4.1LG03g17890 vs. Swiss-Prot
Match: Y1044_ARATH (BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 3.9e-18
Identity = 58/136 (42.65%), Postives = 81/136 (59.56%), Query Frame = 1 

Query: 15  GIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQKIPLRIVVQVLVLVQ 74
           G+YRAIDIYL  H +L E+ERE +CR LD  ++S E C HAA+N+++PLRI+VQVL   Q
Sbjct: 447 GLYRAIDIYLKHHPWLAETERENLCRLLDCQKLSLEACTHAAQNERLPLRIIVQVLFFEQ 506

Query: 75  LQLR------YAITKEMQGSDNKL-----IQDEVESDGG----VLALSEG-LVKNEMEKM 134
           LQLR      + ++  + G   +L     +    E  GG      A+ E  ++K  M+ M
Sbjct: 507 LQLRTSVAGCFLVSDNLDGGSRQLRSGGYVGGPNEGGGGGGGWATAVRENQVLKVGMDSM 566

[Close]
BLAST of Cp4.1LG03g17890 vs. Swiss-Prot
Match: Y5360_ARATH (Putative BTB/POZ domain-containing protein At5g13600 OS=Arabidopsis thaliana GN=At5g13600 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.4e-17
Identity = 49/120 (40.83%), Postives = 75/120 (62.50%), Query Frame = 1 

Query: 15  GIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQKIPLRIVVQVLVLVQ 74
           GIYRAIDIY+  H +LTESERE++C  ++  ++S E C HAA+N+++PLR++VQVL   Q
Sbjct: 432 GIYRAIDIYIKAHPWLTESEREQLCLLMNCQKLSLEACTHAAQNERLPLRVIVQVLFFEQ 491

Query: 75  LQLRYAITKEMQGSDNKLIQDEVESDGGVLALSEGLVKNEMEKMNNKVMELEKECHMMRK 134
           ++LR +I   + GS     ++  ++ G +           M  M  +V ELEKEC  M++
Sbjct: 492 MRLRTSIAGWLFGS-----EENNDTSGALEGNKNTNANMVMHGMRERVFELEKECMSMKQ 546

[Close]
BLAST of Cp4.1LG03g17890 vs. Swiss-Prot
Match: Y3084_ARATH (BTB/POZ domain-containing protein At3g50840 OS=Arabidopsis thaliana GN=At3g50840 PE=2 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 1.7e-16
Identity = 51/127 (40.16%), Postives = 77/127 (60.63%), Query Frame = 1 

Query: 15  GIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQKIPLRIVVQVLVLVQ 74
           G+YRA+DIY   HS++ E E+E++C  +D  +++ E C HAA+N+++PLR VVQVL L Q
Sbjct: 398 GLYRAVDIYFKTHSWILEEEKEKICSVMDCRKLTVEGCTHAAQNERLPLRAVVQVLFLEQ 457

Query: 75  LQLRYAITKEM--QGSDNKLIQD-----EVESDGGVLALSEGLVKNEMEKMNNKVMELEK 134
           LQLR  IT  +  +   +K + D     E   +  VL L       +M+ M  +V +LEK
Sbjct: 458 LQLRQVITGTLLTEEDGDKTVVDLGRWKEAVKENQVLRL-------DMDTMRTRVNQLEK 517

[Close]
BLAST of Cp4.1LG03g17890 vs. TrEMBL
Match: A0A0A0L9A5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129530 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.2e-50
Identity = 110/134 (82.09%), Postives = 121/134 (90.30%), Query Frame = 1 

Query: 1   MSSAASMGTDRSSGGIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQK 60
           MSSAASMGTDRSS GIYRAID YLDKHS+LTESEREEVCRGLDYHRMSAE CEHAAKNQ+
Sbjct: 390 MSSAASMGTDRSSDGIYRAIDTYLDKHSFLTESEREEVCRGLDYHRMSAEACEHAAKNQR 449

Query: 61  IPLRIVVQVLVLVQLQLRYAITKEMQGSDNKLIQDEVESDGGVLALSEGLVKNEMEKMNN 120
           +PLRIVVQVL LVQLQLR AI K++Q +DNKL QDEVE+D   L LSE +VKNEMEKM+N
Sbjct: 450 LPLRIVVQVLFLVQLQLRDAIVKDIQRTDNKLTQDEVEND-RELNLSEAIVKNEMEKMSN 509

Query: 121 KVMELEKECHMMRK 135
           KV+ELEKECH+MRK
Sbjct: 510 KVIELEKECHVMRK 522

[Close]
BLAST of Cp4.1LG03g17890 vs. TrEMBL
Match: A0A061EZT3_THECC (Phototropic-responsive NPH3 family protein, putative OS=Theobroma cacao GN=TCM_025679 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.1e-34
Identity = 78/134 (58.21%), Postives = 105/134 (78.36%), Query Frame = 1 

Query: 1   MSSAASMGTDRSSGGIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQK 60
           MS AA++G  R+S GIYRAIDIYLDKH+YLTE E+E VCR LD+ ++S E CEHAAKN++
Sbjct: 387 MSMAAALGIQRNSDGIYRAIDIYLDKHTYLTEKEKEHVCRVLDFRKLSPEACEHAAKNER 446

Query: 61  IPLRIVVQVLVLVQLQLRYAITKEMQGSDNKLIQDEVESDGGVLALSEGLVKNEMEKMNN 120
           +P+R+VVQVL + QLQLR  +TKE++G D+KL ++E E +   +   E  V+ EMEKM+ 
Sbjct: 447 LPVRVVVQVLFMAQLQLRDTLTKEVRGYDDKLGKEEEEEEAN-MGCREDKVRMEMEKMSI 506

Query: 121 KVMELEKECHMMRK 135
           KV ELEKEC++M+K
Sbjct: 507 KVKELEKECNVMKK 519

[Close]
BLAST of Cp4.1LG03g17890 vs. TrEMBL
Match: M1CKH3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027005 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.3e-33
Identity = 80/137 (58.39%), Postives = 104/137 (75.91%), Query Frame = 1 

Query: 1   MSSAASMGTDRSSGGIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQK 60
           +S AA+ GT+R+S G+YRAIDIYLDKH YLT+ EREEVCR LD  +MS E CEHAAKN+K
Sbjct: 289 LSQAATGGTNRNSDGMYRAIDIYLDKHRYLTDWEREEVCRVLDCSKMSPEACEHAAKNEK 348

Query: 61  IPLRIVVQVLVLVQLQLRYAITKEMQ-GSDNKL--IQDEVESDGGVLALSEGLVKNEMEK 120
           +P+R+ VQ+L  VQL+L+  +TK +Q G DN+L  ++++ E   G     E  +K EMEK
Sbjct: 349 LPVRVTVQILFSVQLKLKDNVTKRIQRGPDNRLLKLEEDEEDAKGTSNSEEATMKAEMEK 408

Query: 121 MNNKVMELEKECHMMRK 135
           M NKV+ELEKECHMMR+
Sbjct: 409 MGNKVLELEKECHMMRR 425

[Close]
BLAST of Cp4.1LG03g17890 vs. TrEMBL
Match: F6I2W8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02810 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 7.5e-32
Identity = 82/138 (59.42%), Postives = 104/138 (75.36%), Query Frame = 1 

Query: 1   MSSAASMGTDRSSGGIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQK 60
           M++  S GT RSS G+YRAIDIYLDKH +LTE+EREE C+ LDY RMS E  EHAA+N++
Sbjct: 374 MAAVTSRGTRRSSDGMYRAIDIYLDKHKHLTEAEREEACQMLDYQRMSPEALEHAARNER 433

Query: 61  IPLRIVVQVLVLVQLQLRYAITK--EMQGSDNKLIQDEVESDGGV-LALSE-GLVKNEME 120
           +PLR+VVQVL + QLQLR  IT+  E +  + +  ++E E  GGV L  SE G V+ EME
Sbjct: 434 LPLRVVVQVLFVGQLQLRETITRKAEAEEEEEEDEEEEEEEGGGVELGCSEGGGVRREME 493

Query: 121 KMNNKVMELEKECHMMRK 135
           KM +KVMELE+ECH+MRK
Sbjct: 494 KMGSKVMELERECHVMRK 511

[Close]
BLAST of Cp4.1LG03g17890 vs. TrEMBL
Match: K4C967_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 7.5e-32
Identity = 77/137 (56.20%), Postives = 103/137 (75.18%), Query Frame = 1 

Query: 1   MSSAASMGTDRSSGGIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQK 60
           +S AA+ GT+R+S GIYRAIDIYLD+H YLT+ EREEVCR LD  +MS E CEHAA N+K
Sbjct: 387 LSQAATAGTNRNSDGIYRAIDIYLDRHRYLTDWEREEVCRVLDCSKMSPEACEHAATNEK 446

Query: 61  IPLRIVVQVLVLVQLQLRYAITKEM-QGSDNKL--IQDEVESDGGVLALSEGLVKNEMEK 120
           +P+R+ VQ+L  VQL+L+  +TK + +G DN+L  ++++ E   G     E ++K EME 
Sbjct: 447 LPVRVTVQILFSVQLKLKDNVTKRIKRGPDNRLLKLEEDEEDAKGTSNSEEEMMKAEMEM 506

Query: 121 MNNKVMELEKECHMMRK 135
           M NKV+ELEKECHMMR+
Sbjct: 507 MGNKVLELEKECHMMRR 523

[Close]
BLAST of Cp4.1LG03g17890 vs. TAIR10
Match: AT5G17580.1 (AT5G17580.1 Phototropic-responsive NPH3 family protein)

HSP 1 Score: 105.1 bits (261), Expect = 3.3e-23
Identity = 61/128 (47.66%), Postives = 86/128 (67.19%), Query Frame = 1 

Query: 1   MSSAASMGTDRSSGGIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQK 60
           M+ A S G    S GIYRAID++L+ H YLTESE+ EVC+ L+  ++S E  E AAKNQK
Sbjct: 367 MTVAVSQGILSYSDGIYRAIDVFLESHRYLTESEKMEVCKVLECGKLSQEGFERAAKNQK 426

Query: 61  IPLRIVVQVLVLVQLQLRYAITKEMQGSDNKLIQDEVESDGGVLALSEGLVKNEMEKMNN 120
           +PLRIVV VL + QLQ+R  + KE++G + K+ ++E E       +     ++EMEKM+N
Sbjct: 427 LPLRIVVNVLCVSQLQIRDTVAKEIKGMEEKVDEEEEEE------IEVSSDEDEMEKMSN 486

Query: 121 KVMELEKE 129
           K++ LE E
Sbjct: 487 KLLGLEIE 488

[Close]
BLAST of Cp4.1LG03g17890 vs. TAIR10
Match: AT3G03510.1 (AT3G03510.1 Phototropic-responsive NPH3 family protein)

HSP 1 Score: 92.4 bits (228), Expect = 2.2e-19
Identity = 61/138 (44.20%), Postives = 87/138 (63.04%), Query Frame = 1 

Query: 4   AASMGTDRSSGGIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQKIPL 63
           AAS      S GIYRAID+YL++H  L ESE+ E CR L   ++S E CEHA+KN+K+PL
Sbjct: 289 AASCDVLSYSDGIYRAIDVYLERHRDLIESEKMEACRFLHCKKLSPEACEHASKNEKLPL 348

Query: 64  RIVVQVLVLVQLQLRYAITKEMQG----SDNKLIQDEVESDGGVLALSEGLVKNEME--- 123
           RIV+QVL + Q+Q+R  + +EM+G    ++N++  DEVES      +S+ L+K E+E   
Sbjct: 349 RIVMQVLFVSQMQIRDKVAREMKGVVERTENQV--DEVES------MSKKLLKLEIEPDY 408

Query: 124 KMNNKVMELEKECHMMRK 135
               K+  LE   H  +K
Sbjct: 409 MKKRKIENLECVVHCEKK 418

[Close]
BLAST of Cp4.1LG03g17890 vs. TAIR10
Match: AT1G30440.1 (AT1G30440.1 Phototropic-responsive NPH3 family protein)

HSP 1 Score: 92.4 bits (228), Expect = 2.2e-19
Identity = 58/136 (42.65%), Postives = 81/136 (59.56%), Query Frame = 1 

Query: 15  GIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQKIPLRIVVQVLVLVQ 74
           G+YRAIDIYL  H +L E+ERE +CR LD  ++S E C HAA+N+++PLRI+VQVL   Q
Sbjct: 447 GLYRAIDIYLKHHPWLAETERENLCRLLDCQKLSLEACTHAAQNERLPLRIIVQVLFFEQ 506

Query: 75  LQLR------YAITKEMQGSDNKL-----IQDEVESDGG----VLALSEG-LVKNEMEKM 134
           LQLR      + ++  + G   +L     +    E  GG      A+ E  ++K  M+ M
Sbjct: 507 LQLRTSVAGCFLVSDNLDGGSRQLRSGGYVGGPNEGGGGGGGWATAVRENQVLKVGMDSM 566

[Close]
BLAST of Cp4.1LG03g17890 vs. TAIR10
Match: AT5G13600.1 (AT5G13600.1 Phototropic-responsive NPH3 family protein)

HSP 1 Score: 89.0 bits (219), Expect = 2.5e-18
Identity = 49/120 (40.83%), Postives = 75/120 (62.50%), Query Frame = 1 

Query: 15  GIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQKIPLRIVVQVLVLVQ 74
           GIYRAIDIY+  H +LTESERE++C  ++  ++S E C HAA+N+++PLR++VQVL   Q
Sbjct: 432 GIYRAIDIYIKAHPWLTESEREQLCLLMNCQKLSLEACTHAAQNERLPLRVIVQVLFFEQ 491

Query: 75  LQLRYAITKEMQGSDNKLIQDEVESDGGVLALSEGLVKNEMEKMNNKVMELEKECHMMRK 134
           ++LR +I   + GS     ++  ++ G +           M  M  +V ELEKEC  M++
Sbjct: 492 MRLRTSIAGWLFGS-----EENNDTSGALEGNKNTNANMVMHGMRERVFELEKECMSMKQ 546

[Close]
BLAST of Cp4.1LG03g17890 vs. TAIR10
Match: AT3G50840.1 (AT3G50840.1 Phototropic-responsive NPH3 family protein)

HSP 1 Score: 87.0 bits (214), Expect = 9.3e-18
Identity = 51/127 (40.16%), Postives = 77/127 (60.63%), Query Frame = 1 

Query: 15  GIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQKIPLRIVVQVLVLVQ 74
           G+YRA+DIY   HS++ E E+E++C  +D  +++ E C HAA+N+++PLR VVQVL L Q
Sbjct: 398 GLYRAVDIYFKTHSWILEEEKEKICSVMDCRKLTVEGCTHAAQNERLPLRAVVQVLFLEQ 457

Query: 75  LQLRYAITKEM--QGSDNKLIQD-----EVESDGGVLALSEGLVKNEMEKMNNKVMELEK 134
           LQLR  IT  +  +   +K + D     E   +  VL L       +M+ M  +V +LEK
Sbjct: 458 LQLRQVITGTLLTEEDGDKTVVDLGRWKEAVKENQVLRL-------DMDTMRTRVNQLEK 517

[Close]
BLAST of Cp4.1LG03g17890 vs. NCBI nr
Match: gi|659075735|ref|XP_008438302.1| (PREDICTED: BTB/POZ domain-containing protein At5g17580 isoform X1 [Cucumis melo])

HSP 1 Score: 209.5 bits (532), Expect = 3.5e-51
Identity = 111/134 (82.84%), Postives = 121/134 (90.30%), Query Frame = 1 

Query: 1   MSSAASMGTDRSSGGIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQK 60
           MSSAASMGTDRSS GIYRAID YLDKHS+LTESEREEVCRGLDYHRMSAE CEHAAKNQ+
Sbjct: 437 MSSAASMGTDRSSDGIYRAIDTYLDKHSFLTESEREEVCRGLDYHRMSAEACEHAAKNQR 496

Query: 61  IPLRIVVQVLVLVQLQLRYAITKEMQGSDNKLIQDEVESDGGVLALSEGLVKNEMEKMNN 120
           +PLRIVVQVL LVQLQLR AI K+M  +DNKL QDEV +D G L LSEG+VKNEMEKM+N
Sbjct: 497 LPLRIVVQVLFLVQLQLRDAIAKDMHRTDNKLTQDEVGND-GELNLSEGIVKNEMEKMSN 556

Query: 121 KVMELEKECHMMRK 135
           KV+ELEKECH+MRK
Sbjct: 557 KVIELEKECHVMRK 569

[Close]
BLAST of Cp4.1LG03g17890 vs. NCBI nr
Match: gi|659075737|ref|XP_008438303.1| (PREDICTED: BTB/POZ domain-containing protein At5g17580 isoform X2 [Cucumis melo])

HSP 1 Score: 209.5 bits (532), Expect = 3.5e-51
Identity = 111/134 (82.84%), Postives = 121/134 (90.30%), Query Frame = 1 

Query: 1   MSSAASMGTDRSSGGIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQK 60
           MSSAASMGTDRSS GIYRAID YLDKHS+LTESEREEVCRGLDYHRMSAE CEHAAKNQ+
Sbjct: 387 MSSAASMGTDRSSDGIYRAIDTYLDKHSFLTESEREEVCRGLDYHRMSAEACEHAAKNQR 446

Query: 61  IPLRIVVQVLVLVQLQLRYAITKEMQGSDNKLIQDEVESDGGVLALSEGLVKNEMEKMNN 120
           +PLRIVVQVL LVQLQLR AI K+M  +DNKL QDEV +D G L LSEG+VKNEMEKM+N
Sbjct: 447 LPLRIVVQVLFLVQLQLRDAIAKDMHRTDNKLTQDEVGND-GELNLSEGIVKNEMEKMSN 506

Query: 121 KVMELEKECHMMRK 135
           KV+ELEKECH+MRK
Sbjct: 507 KVIELEKECHVMRK 519

[Close]
BLAST of Cp4.1LG03g17890 vs. NCBI nr
Match: gi|778677745|ref|XP_011650855.1| (PREDICTED: BTB/POZ domain-containing protein At5g17580 isoform X2 [Cucumis sativus])

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-50
Identity = 110/134 (82.09%), Postives = 121/134 (90.30%), Query Frame = 1 

Query: 1   MSSAASMGTDRSSGGIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQK 60
           MSSAASMGTDRSS GIYRAID YLDKHS+LTESEREEVCRGLDYHRMSAE CEHAAKNQ+
Sbjct: 387 MSSAASMGTDRSSDGIYRAIDTYLDKHSFLTESEREEVCRGLDYHRMSAEACEHAAKNQR 446

Query: 61  IPLRIVVQVLVLVQLQLRYAITKEMQGSDNKLIQDEVESDGGVLALSEGLVKNEMEKMNN 120
           +PLRIVVQVL LVQLQLR AI K++Q +DNKL QDEVE+D   L LSE +VKNEMEKM+N
Sbjct: 447 LPLRIVVQVLFLVQLQLRDAIVKDIQRTDNKLTQDEVEND-RELNLSEAIVKNEMEKMSN 506

Query: 121 KVMELEKECHMMRK 135
           KV+ELEKECH+MRK
Sbjct: 507 KVIELEKECHVMRK 519

[Close]
BLAST of Cp4.1LG03g17890 vs. NCBI nr
Match: gi|778677742|ref|XP_011650854.1| (PREDICTED: BTB/POZ domain-containing protein At5g17580 isoform X1 [Cucumis sativus])

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-50
Identity = 110/134 (82.09%), Postives = 121/134 (90.30%), Query Frame = 1 

Query: 1   MSSAASMGTDRSSGGIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQK 60
           MSSAASMGTDRSS GIYRAID YLDKHS+LTESEREEVCRGLDYHRMSAE CEHAAKNQ+
Sbjct: 390 MSSAASMGTDRSSDGIYRAIDTYLDKHSFLTESEREEVCRGLDYHRMSAEACEHAAKNQR 449

Query: 61  IPLRIVVQVLVLVQLQLRYAITKEMQGSDNKLIQDEVESDGGVLALSEGLVKNEMEKMNN 120
           +PLRIVVQVL LVQLQLR AI K++Q +DNKL QDEVE+D   L LSE +VKNEMEKM+N
Sbjct: 450 LPLRIVVQVLFLVQLQLRDAIVKDIQRTDNKLTQDEVEND-RELNLSEAIVKNEMEKMSN 509

Query: 121 KVMELEKECHMMRK 135
           KV+ELEKECH+MRK
Sbjct: 510 KVIELEKECHVMRK 522

[Close]
BLAST of Cp4.1LG03g17890 vs. NCBI nr
Match: gi|645252445|ref|XP_008232127.1| (PREDICTED: BTB/POZ domain-containing protein At5g17580 [Prunus mume])

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-34
Identity = 83/134 (61.94%), Postives = 103/134 (76.87%), Query Frame = 1 

Query: 1   MSSAASMGTDRSSGGIYRAIDIYLDKHSYLTESEREEVCRGLDYHRMSAEVCEHAAKNQK 60
           MS AAS+GT R+  GIYRA+DIYLDKH +LTESEREEVCR LD+ ++S E  EHAAKN+K
Sbjct: 389 MSLAASLGTQRTLDGIYRAVDIYLDKHRHLTESEREEVCRVLDFQKVSPEAYEHAAKNEK 448

Query: 61  IPLRIVVQVLVLVQLQLRYAITKEMQGSDNKLIQDEVESDGGVLALSEGLVKNEMEKMNN 120
           +PLR+VVQVL   QLQLR  I KE+Q SD+K  ++E E     L   E  +++EMEKM+ 
Sbjct: 449 LPLRVVVQVLFAGQLQLRDRILKEVQDSDDKSTKEEAEEYEAKLDFGEEEMRSEMEKMSM 508

Query: 121 KVMELEKECHMMRK 135
           KVMELE+EC+MMRK
Sbjct: 509 KVMELERECNMMRK 522

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g17890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y5758_ARATH5.9e-2247.66BTB/POZ domain-containing protein At5g17580 OS=Arabidopsis thaliana GN=At5g17580... [more]
Y3351_ARATH3.9e-1844.20BTB/POZ domain-containing protein At3g03510 OS=Arabidopsis thaliana GN=At3g03510... [more]
Y1044_ARATH3.9e-1842.65BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440... [more]
Y5360_ARATH4.4e-1740.83Putative BTB/POZ domain-containing protein At5g13600 OS=Arabidopsis thaliana GN=... [more]
Y3084_ARATH1.7e-1640.16BTB/POZ domain-containing protein At3g50840 OS=Arabidopsis thaliana GN=At3g50840... [more]
BLAST of Cp4.1LG03g17890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9A5_CUCSA1.2e-5082.09Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129530 PE=4 SV=1[more]
A0A061EZT3_THECC6.1e-3458.21Phototropic-responsive NPH3 family protein, putative OS=Theobroma cacao GN=TCM_0... [more]
M1CKH3_SOLTU2.3e-3358.39Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027005 PE=4 SV=1[more]
F6I2W8_VITVI7.5e-3259.42Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02810 PE=4 SV=... [more]
K4C967_SOLLC7.5e-3256.20Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
BLAST of Cp4.1LG03g17890 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G17580.13.3e-2347.66 Phototropic-responsive NPH3 family protein[more]
AT3G03510.12.2e-1944.20 Phototropic-responsive NPH3 family protein[more]
AT1G30440.12.2e-1942.65 Phototropic-responsive NPH3 family protein[more]
AT5G13600.12.5e-1840.83 Phototropic-responsive NPH3 family protein[more]
AT3G50840.19.3e-1840.16 Phototropic-responsive NPH3 family protein[more]
BLAST of Cp4.1LG03g17890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075735|ref|XP_008438302.1|3.5e-5182.84PREDICTED: BTB/POZ domain-containing protein At5g17580 isoform X1 [Cucumis melo][more]
gi|659075737|ref|XP_008438303.1|3.5e-5182.84PREDICTED: BTB/POZ domain-containing protein At5g17580 isoform X2 [Cucumis melo][more]
gi|778677745|ref|XP_011650855.1|1.8e-5082.09PREDICTED: BTB/POZ domain-containing protein At5g17580 isoform X2 [Cucumis sativ... [more]
gi|778677742|ref|XP_011650854.1|1.8e-5082.09PREDICTED: BTB/POZ domain-containing protein At5g17580 isoform X1 [Cucumis sativ... [more]
gi|645252445|ref|XP_008232127.1|2.3e-3461.94PREDICTED: BTB/POZ domain-containing protein At5g17580 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027356NPH3_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g17890.1Cp4.1LG03g17890.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027356NPH3 domainPFAMPF03000NPH3coord: 13..52
score: 1.2
IPR027356NPH3 domainPROFILEPS51649NPH3coord: 1..76
score: 28
NoneNo IPR availableunknownCoilCoilcoord: 108..134
scor
NoneNo IPR availablePANTHERPTHR32370FAMILY NOT NAMEDcoord: 15..134
score: 5.9
NoneNo IPR availablePANTHERPTHR32370:SF12SUBFAMILY NOT NAMEDcoord: 15..134
score: 5.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g17890CmaCh14G019230Cucurbita maxima (Rimu)cmacpeB283
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g17890Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g17890Cucumber (Chinese Long) v3cpecucB0764
Cp4.1LG03g17890Wax gourdcpewgoB0784
Cp4.1LG03g17890Cucurbita pepo (Zucchini)cpecpeB184
Cp4.1LG03g17890Cucurbita pepo (Zucchini)cpecpeB333
Cp4.1LG03g17890Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG03g17890Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g17890Cucurbita maxima (Rimu)cmacpeB402
Cp4.1LG03g17890Cucurbita maxima (Rimu)cmacpeB837
Cp4.1LG03g17890Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g17890Cucurbita moschata (Rifu)cmocpeB364
Cp4.1LG03g17890Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g17890Wild cucumber (PI 183967)cpecpiB611
Cp4.1LG03g17890Cucumber (Chinese Long) v2cpecuB609
Cp4.1LG03g17890Bottle gourd (USVL1VR-Ls)cpelsiB484
Cp4.1LG03g17890Bottle gourd (USVL1VR-Ls)cpelsiB506
Cp4.1LG03g17890Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g17890Watermelon (Charleston Gray)cpewcgB561
Cp4.1LG03g17890Watermelon (97103) v1cpewmB613
Cp4.1LG03g17890Silver-seed gourdcarcpeB0327
Cp4.1LG03g17890Melon (DHL92) v3.5.1cpemeB585
Cp4.1LG03g17890Cucumber (Gy14) v2cgybcpeB406
Cp4.1LG03g17890Cucumber (Gy14) v2cgybcpeB413
Cp4.1LG03g17890Melon (DHL92) v3.6.1cpemedB693
Cp4.1LG03g17890Melon (DHL92) v3.6.1cpemedB696
Cp4.1LG03g17890Silver-seed gourdcarcpeB0884
Cp4.1LG03g17890Silver-seed gourdcarcpeB1331
Cp4.1LG03g17890Silver-seed gourdcarcpeB1504