Cp4.1LG03g17060 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG03g17060
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	D-isomer specific 2-hydroxyacid dehydrogenase family protein
Location	Cp4.1LG03 : 12918418 .. 12920259 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATGATCACTACAACGGAGATAATCAGTACGGAGAATCACAAAGCGAAGAGCATTATAGAAGAATGGGAGGAGAATTCTTTCGCTTTGTCGCTCAAAAGAGAGCGCGAAGTTAGCAGGATGGATTCTTTTGACGGTTCACGAACAGAAAATGAAGGTCGGTCCTTATAGTCCCCGCCCAAAATTATTGGCAAAATATACCCAATATTTCGTATTCTTTTAGGGCATAACTTAACTTAAATTATATAAAATAACTGTTAAAGTCGTAGTAGCTTATTTAGTTAGTTCAGACTATTTTAATTTAATTTGGATTTTTTCCAAAAAATATAATTTTGGCACCACTTTTTCTTGTTAAATTATTATACACTTTTGCTTTGCTGCACTTGAAAGTAGCTTTTAAATTATGATTTTTTTTTAATGACGGTTATTTTAAAAATATCCTTAATTTCTTTTAATTAAAATACATAAATTGACATAATTATTAATTAAAATAGAAAAAAAGACGTACACATATATAGAACATCATTTACAGCCTCATTCACAAAATCAAATTTTACAGCTACATTAATTTACATGAATGTCTTGGATGCCTTTTAATTTATAAACATTAATCATAATGTCAATTTTCATCCATCATTGTAATAAAATTTACATTAAATCGATTTACTGTAACAGGAAAAAAAATTATGGATACCAACTTTTAGATTTAGCTTTTATAAAAGTCTGCCGCCACCTCTAAACTTTTATTTTTCTAAAATTTTTATTAAATAATTTGGATTAAACAAAATTAGATGTGATTTATATTATACAAAAGTTTAAACAATTACCACATAGTAAACTACAAAATTAAATTTTGATATGAAGTAACTAAAATAATAAAACCTATTTTCGACCTTATAGCTAAATAAAGAATTTTTTTTTTCTAATTTAAAACTGATTTTTTGGCTGCGAATCGCAATCTTGTTTTATCCATCCAAAGGAAATCTAATTCGTCTTCCTTAGTAACAGGTAAAAATGGCACTGGAAAGACAGGCCGAAGAGCTTCCTCCCTGAGTACTGTCAGTTTCGGAATCCCAATTCCCAAACAAATTAAATTTCCTCACTTCTTTTCTCGACTGCCTCCCGTCGCTGGAGCTCGACGTCACTCCCAGCGCCGGTGTCGACCACTTGAACTTGGCCTAATTACGGGGCCGTGGGATAGCCATTGCCCATGCAGGAAACTTGTTCTCTGAAGATGTCGCCGATATGGCGGTTGGATTACTAATCCATGTCCTTAGAAAAGTGTCGGCGGGAGACCGGTTCGTAAGGCAAGGACTCTGGCCTACCAAAGGTGATTTTCCTCTCAGATTAAAGGTGCAATTGATTTTTTTTTTTTTTCCCCTTCATCTAATTGCAATTTCCACTTTCTATTCTTCGTCTTCATTTCCAATCACCTCAGTAACAAAAGTGTAGTTGAATTTGGATGTTTTTAGATTGATGAATTTGAAGGTTAAAAATTTTCACAGTTGAGCGGCAAGCAAATAGGGATTAGTTGGATTGGGAGGTGATGCTAGCATTAGGAAAAATTGGAGTGATAATCAACATTGGTCAGGGCGATCATTGACGAGAATTGACGAGAAGGAGATAGGGTGCTGGGTGTCACAATCGCACTTCGAGCATGATGGTGACACTGAGCTGGATGTGTTTGAGAATGAGCCCGAAATTCCAGAACAGCTCTTTAAACTAGATAATGGTGCTATCATAACACATGAATCTTTTGTGGGAATGTCTAAGTTGGTGGTGGAAAACATGGAGGCACTCTTCTCAAACAAACCTCTGGTGTCTCCCTTCATGGATTAG

mRNA sequence

ATGTCGATGATCACTACAACGGAGATAATCAGTACGGAGAATCACAAAGCGAAGAGCATTATAGAAGAATGGGAGGAGAATTCTTTCGCTTTGTCGCTCAAAAGAGAGCGCGAAGTTAGCAGGATGGATTCTTTTGACGGTTCACGAACAGAAAATGAAGCCATTGCCCATGCAGGAAACTTGTTCTCTGAAGATGTCGCCGATATGGCGGTTGGATTACTAATCCATGTCCTTAGAAAAGTGTCGGCGGGAGACCGGTTCGTAAGGCAAGGACTCTGGCCTACCAAAGGGCGATCATTGACGAGAATTGACGAGAAGGAGATAGGGTGCTGGGTGTCACAATCGCACTTCGAGCATGATGGTGACACTGAGCTGGATGTGTTTGAGAATGAGCCCGAAATTCCAGAACAGCTCTTTAAACTAGATAATGGTGCTATCATAACACATGAATCTTTTGTGGGAATGTCTAAGTTGGTGGTGGAAAACATGGAGGCACTCTTCTCAAACAAACCTCTGGTGTCTCCCTTCATGGATTAG

Coding sequence (CDS)

ATGTCGATGATCACTACAACGGAGATAATCAGTACGGAGAATCACAAAGCGAAGAGCATTATAGAAGAATGGGAGGAGAATTCTTTCGCTTTGTCGCTCAAAAGAGAGCGCGAAGTTAGCAGGATGGATTCTTTTGACGGTTCACGAACAGAAAATGAAGCCATTGCCCATGCAGGAAACTTGTTCTCTGAAGATGTCGCCGATATGGCGGTTGGATTACTAATCCATGTCCTTAGAAAAGTGTCGGCGGGAGACCGGTTCGTAAGGCAAGGACTCTGGCCTACCAAAGGGCGATCATTGACGAGAATTGACGAGAAGGAGATAGGGTGCTGGGTGTCACAATCGCACTTCGAGCATGATGGTGACACTGAGCTGGATGTGTTTGAGAATGAGCCCGAAATTCCAGAACAGCTCTTTAAACTAGATAATGGTGCTATCATAACACATGAATCTTTTGTGGGAATGTCTAAGTTGGTGGTGGAAAACATGGAGGCACTCTTCTCAAACAAACCTCTGGTGTCTCCCTTCATGGATTAG

Protein sequence

MSMITTTEIISTENHKAKSIIEEWEENSFALSLKREREVSRMDSFDGSRTENEAIAHAGNLFSEDVADMAVGLLIHVLRKVSAGDRFVRQGLWPTKGRSLTRIDEKEIGCWVSQSHFEHDGDTELDVFENEPEIPEQLFKLDNGAIITHESFVGMSKLVVENMEALFSNKPLVSPFMD

Homology

[Close]

BLAST of Cp4.1LG03g17060 vs. Swiss-Prot
Match: HPR3_ARATH (Glyoxylate/hydroxypyruvate reductase HPR3 OS=Arabidopsis thaliana GN=HPR3 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07
Identity = 27/43 (62.79%), Postives = 32/43 (74.42%), Query Frame = 1


Query: 55  IAHAGNLFSEDVADMAVGLLIHVLRKVSAGDRFVRQGLWPTKG 98
           I +AGN FS+DVAD AVGLLI VLR++ A DR+VR G W   G
Sbjct: 100 ITNAGNAFSDDVADCAVGLLISVLRRIPAADRYVRSGNWAKFG 142

[Close]

BLAST of Cp4.1LG03g17060 vs. Swiss-Prot
Match: HPPR_PLESU (Hydroxyphenylpyruvate reductase OS=Plectranthus scutellarioides GN=HPPR PE=1 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 4.2e-07
Identity = 30/61 (49.18%), Postives = 40/61 (65.57%), Query Frame = 1


Query: 121 GDTELDVFENEPEIPEQLFKLDNGAIITH------ESFVGMSKLVVENMEALFSNKPLVS 176
           G   LDVFE EPE+PE+LF L+N  ++ H      E+   M+ LVV N+EA FS KPL++
Sbjct: 251 GGAGLDVFEREPEVPEKLFGLENVVLLPHVGSGTVETRKVMADLVVGNLEAHFSGKPLLT 310

[Close]

BLAST of Cp4.1LG03g17060 vs. Swiss-Prot
Match: HPR2_ARATH (Glyoxylate/hydroxypyruvate reductase A HPR2 OS=Arabidopsis thaliana GN=HPR2 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.1e-06
Identity = 31/79 (39.24%), Postives = 47/79 (59.49%), Query Frame = 1


Query: 103 IDEKEIGCWVSQSHFEHDGDTELDVFENEPEIPEQLFKLDNGAIITH------ESFVGMS 162
           +DE+E+   +++      G   LDVFE EP +PE+LF L+N  ++ H      E+   M+
Sbjct: 236 VDEQELIKALTEGRL---GGAALDVFEQEPHVPEELFGLENVVLLPHVGSGTVETRNAMA 295

Query: 163 KLVVENMEALFSNKPLVSP 176
            LVV N+EA FS K L++P
Sbjct: 296 DLVVGNLEAHFSGKSLLTP 311

[Close]

BLAST of Cp4.1LG03g17060 vs. TrEMBL
Match: A0A0A0L7K6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124910 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.5e-13
Identity = 49/96 (51.04%), Postives = 62/96 (64.58%), Query Frame = 1


Query: 89  RQGLWPTKGRSLTRIDEKEIGCWVSQSHFEHDGDTELDVFENEPEIPEQLFKLDN----- 148
           + G+    GR L  IDEKE+   ++Q      G   LDVFENEP +PE+LF LDN     
Sbjct: 241 KDGVIVNIGRGLI-IDEKEMIRCLTQGEI---GGAGLDVFENEPNVPEELFNLDNVVLSP 300

Query: 149 -GAIITHESFVGMSKLVVENMEALFSNKPLVSPFMD 179
             A++T+ES V +SKLVV N+EA FSNKPLVSP +D
Sbjct: 301 HAAVMTYESKVELSKLVVNNLEAFFSNKPLVSPVVD 332

[Close]

BLAST of Cp4.1LG03g17060 vs. TrEMBL
Match: A0A0A0L908_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124900 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.0e-12
Identity = 47/82 (57.32%), Postives = 56/82 (68.29%), Query Frame = 1


Query: 103 IDEKE-IGCWVSQSHFEHDGDTELDVFENEPEIPEQLFKLDN------GAIITHESFVGM 162
           IDEKE I C +        G   LDVFE EPEIP+QLF LDN       A+ THESFVG+
Sbjct: 247 IDEKEMIRCLIEGEI----GGAGLDVFEFEPEIPKQLFTLDNVVLSPHTAVTTHESFVGI 306

Query: 163 SKLVVENMEALFSNKPLVSPFM 178
           +KL VEN+EA FSNKPL+SP++
Sbjct: 307 AKLAVENLEAFFSNKPLLSPYV 324

[Close]

BLAST of Cp4.1LG03g17060 vs. TrEMBL
Match: A0A0A0L4C2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124920 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.3e-11
Identity = 43/82 (52.44%), Postives = 55/82 (67.07%), Query Frame = 1


Query: 103 IDEKEIGCWVSQSHFEHDGDTELDVFENEPEIPEQLFKLDNG------AIITHESFVGMS 162
           IDEK +  ++ Q   +  G   LDVFE+EPEIP+QLF LDN       A+ T ES  G+ 
Sbjct: 249 IDEKAMIEYLIQGEIKGAG---LDVFEDEPEIPKQLFNLDNVVLSPHVAVTTTESIAGLI 308

Query: 163 KLVVENMEALFSNKPLVSPFMD 179
           +L +EN+EA FSNKPLVSPF+D
Sbjct: 309 ELALENLEAFFSNKPLVSPFLD 327

[Close]

BLAST of Cp4.1LG03g17060 vs. TrEMBL
Match: M5XGC8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019396mg PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.6e-11
Identity = 44/96 (45.83%), Postives = 57/96 (59.38%), Query Frame = 1


Query: 89  RQGLWPTKGRSLTRIDEKEIGCWVSQSHFEHDGDTELDVFENEPEIPEQLFKLDN----- 148
           R+G+    GR    IDEKE+  ++        G   LDVFENEP +PE+LF LDN     
Sbjct: 232 REGVIVNVGRGAI-IDEKELVRFLVHGEI---GGAGLDVFENEPHVPEELFALDNVVLSP 291

Query: 149 -GAIITHESFVGMSKLVVENMEALFSNKPLVSPFMD 179
             A  T ES    S++V+ N+EA FSN+PLV+PFMD
Sbjct: 292 HNAAFTPESVESSSQIVIANLEAFFSNEPLVTPFMD 323

[Close]

BLAST of Cp4.1LG03g17060 vs. TrEMBL
Match: A0A067H4Q9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020160mg PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.1e-10
Identity = 42/81 (51.85%), Postives = 52/81 (64.20%), Query Frame = 1


Query: 103 IDEKE-IGCWVSQSHFEHDGDTELDVFENEPEIPEQLFKLDN------GAIITHESFVGM 162
           IDEKE +GC +        G   LDVFENEP++PEQLF LDN       A+ T ESF  +
Sbjct: 250 IDEKEMVGCLLRGEI----GGAGLDVFENEPDVPEQLFALDNVVLSPHSAVFTPESFKDV 309

Query: 163 SKLVVENMEALFSNKPLVSPF 177
            +L V N+EA FSNKPL++PF
Sbjct: 310 CELAVANLEAFFSNKPLLTPF 326

[Close]

BLAST of Cp4.1LG03g17060 vs. TAIR10
Match: AT2G45630.2 (AT2G45630.2 D-isomer specific 2-hydroxyacid dehydrogenase family protein)

HSP 1 Score: 62.0 bits (149), Expect = 4.3e-10
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 1


Query: 49  RTENEAIAHAGNLFSEDVADMAVGLLIHVLRKVSAGDRFVRQGLWPTKG 98
           R    ++A+AG+ FSEDVAD AVGLLI V R++SA +RFV+Q  WP KG
Sbjct: 110 RRRGISVANAGSSFSEDVADTAVGLLIDVFRRISAANRFVKQRFWPLKG 158

[Close]

BLAST of Cp4.1LG03g17060 vs. TAIR10
Match: AT1G12550.1 (AT1G12550.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein)

HSP 1 Score: 57.0 bits (136), Expect = 1.4e-08
Identity = 27/43 (62.79%), Postives = 32/43 (74.42%), Query Frame = 1


Query: 55  IAHAGNLFSEDVADMAVGLLIHVLRKVSAGDRFVRQGLWPTKG 98
           I +AGN FS+DVAD AVGLLI VLR++ A DR+VR G W   G
Sbjct: 100 ITNAGNAFSDDVADCAVGLLISVLRRIPAADRYVRSGNWAKFG 142

[Close]

BLAST of Cp4.1LG03g17060 vs. TAIR10
Match: AT1G79870.1 (AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 31/79 (39.24%), Postives = 47/79 (59.49%), Query Frame = 1


Query: 103 IDEKEIGCWVSQSHFEHDGDTELDVFENEPEIPEQLFKLDNGAIITH------ESFVGMS 162
           +DE+E+   +++      G   LDVFE EP +PE+LF L+N  ++ H      E+   M+
Sbjct: 236 VDEQELIKALTEGRL---GGAALDVFEQEPHVPEELFGLENVVLLPHVGSGTVETRNAMA 295

Query: 163 KLVVENMEALFSNKPLVSP 176
            LVV N+EA FS K L++P
Sbjct: 296 DLVVGNLEAHFSGKSLLTP 311

[Close]

BLAST of Cp4.1LG03g17060 vs. NCBI nr
Match: gi|297742630|emb|CBI34779.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 84.3 bits (207), Expect = 2.3e-13
Identity = 57/176 (32.39%), Postives = 81/176 (46.02%), Query Frame = 1


Query: 49  RTENEAIAHAGNLFSEDVADMAVGLLIHVLRKVSAGDRFVRQGLWPTKGR---------- 108
           R     + +AG+ F ED AD A+GLLI VLR++SA DR+VR GLWP KG           
Sbjct: 85  RRRGITVTNAGSSFCEDGADFAIGLLIDVLRRISAADRYVRAGLWPMKGDYPLGSKLGGK 144

Query: 109 -----SLTRIDEK------EIGCWVSQSHFEHDGDTELDVFEN----------------- 168
                 L +I  +        GC ++ +            + N                 
Sbjct: 145 RVGIVGLGKIGSEIAKRLVAFGCRIAYNSRNKKSSVSFPYYANICNLAANIIINVGRGGL 204

Query: 169 -----EPEIPEQLFKLDN------GAIITHESFVGMSKLVVENMEALFSNKPLVSP 176
                 P++P++LF+L+N       AI T ES   + +L+V N+EA FSNKPL+SP
Sbjct: 205 INEKELPDVPKELFELENVVLSPHKAIATLESLASLQELIVGNLEAFFSNKPLLSP 260

[Close]

BLAST of Cp4.1LG03g17060 vs. NCBI nr
Match: gi|778677370|ref|XP_004133897.2| (PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Cucumis sativus])

HSP 1 Score: 83.2 bits (204), Expect = 5.1e-13
Identity = 49/96 (51.04%), Postives = 62/96 (64.58%), Query Frame = 1


Query: 89  RQGLWPTKGRSLTRIDEKEIGCWVSQSHFEHDGDTELDVFENEPEIPEQLFKLDN----- 148
           + G+    GR L  IDEKE+   ++Q      G   LDVFENEP +PE+LF LDN     
Sbjct: 241 KDGVIVNIGRGLI-IDEKEMIRCLTQGEI---GGAGLDVFENEPNVPEELFNLDNVVLSP 300

Query: 149 -GAIITHESFVGMSKLVVENMEALFSNKPLVSPFMD 179
             A++T+ES V +SKLVV N+EA FSNKPLVSP +D
Sbjct: 301 HAAVMTYESKVELSKLVVNNLEAFFSNKPLVSPVVD 332

[Close]

BLAST of Cp4.1LG03g17060 vs. NCBI nr
Match: gi|659075382|ref|XP_008438113.1| (PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Cucumis melo])

HSP 1 Score: 83.2 bits (204), Expect = 5.1e-13
Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 1


Query: 121 GDTELDVFENEPEIPEQLFKLDNG------AIITHESFVGMSKLVVENMEALFSNKPLVS 177
           G   LDVFENEPEIPE+LF  DN       A++THE+ VG+S+LVV+N+EALFSNKPLVS
Sbjct: 267 GGVGLDVFENEPEIPEELFNFDNVVLSPHVAVMTHETLVGLSRLVVDNLEALFSNKPLVS 326

[Close]

BLAST of Cp4.1LG03g17060 vs. NCBI nr
Match: gi|449433109|ref|XP_004134340.1| (PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3 [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-12
Identity = 47/82 (57.32%), Postives = 56/82 (68.29%), Query Frame = 1


Query: 103 IDEKE-IGCWVSQSHFEHDGDTELDVFENEPEIPEQLFKLDN------GAIITHESFVGM 162
           IDEKE I C +        G   LDVFE EPEIP+QLF LDN       A+ THESFVG+
Sbjct: 247 IDEKEMIRCLIEGEI----GGAGLDVFEFEPEIPKQLFTLDNVVLSPHTAVTTHESFVGI 306

Query: 163 SKLVVENMEALFSNKPLVSPFM 178
           +KL VEN+EA FSNKPL+SP++
Sbjct: 307 AKLAVENLEAFFSNKPLLSPYV 324

[Close]

BLAST of Cp4.1LG03g17060 vs. NCBI nr
Match: gi|659077733|ref|XP_008439355.1| (PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Cucumis melo])

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-12
Identity = 48/82 (58.54%), Postives = 55/82 (67.07%), Query Frame = 1


Query: 103 IDEKE-IGCWVSQSHFEHDGDTELDVFENEPEIPEQLFKLDN------GAIITHESFVGM 162
           I+EKE I C +        G   LDVFE EPEIP+QLF LDN       AI THESF GM
Sbjct: 244 IEEKEMIRCLIEGEI----GGAGLDVFEFEPEIPKQLFTLDNVVLSPHAAITTHESFGGM 303

Query: 163 SKLVVENMEALFSNKPLVSPFM 178
           +KL VEN+EA FSNKPLVSP++
Sbjct: 304 AKLAVENLEAFFSNKPLVSPYL 321

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g17060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HPR3_ARATH	2.4e-07	62.79	Glyoxylate/hydroxypyruvate reductase HPR3 OS=Arabidopsis thaliana GN=HPR3 PE=2 S...	[more]
HPPR_PLESU	4.2e-07	49.18	Hydroxyphenylpyruvate reductase OS=Plectranthus scutellarioides GN=HPPR PE=1 SV=...	[more]
HPR2_ARATH	2.1e-06	39.24	Glyoxylate/hydroxypyruvate reductase A HPR2 OS=Arabidopsis thaliana GN=HPR2 PE=1...	[more]

BLAST of Cp4.1LG03g17060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7K6_CUCSA	3.5e-13	51.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124910 PE=3 SV=1	[more]
A0A0A0L908_CUCSA	1.0e-12	57.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124900 PE=3 SV=1	[more]
A0A0A0L4C2_CUCSA	3.3e-11	52.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124920 PE=3 SV=1	[more]
M5XGC8_PRUPE	9.6e-11	45.83	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019396mg PE=3 SV=1	[more]
A0A067H4Q9_CITSI	2.1e-10	51.85	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020160mg PE=3 SV=1	[more]

BLAST of Cp4.1LG03g17060 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45630.2	4.3e-10	59.18	D-isomer specific 2-hydroxyacid dehydrogenase family protein	[more]
AT1G12550.1	1.4e-08	62.79	D-isomer specific 2-hydroxyacid dehydrogenase family protein	[more]
AT1G79870.1	1.2e-07	39.24	D-isomer specific 2-hydroxyacid dehydrogenase family protein	[more]

BLAST of Cp4.1LG03g17060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|297742630\|emb\|CBI34779.3\|	2.3e-13	32.39	unnamed protein product [Vitis vinifera]	[more]
gi\|778677370\|ref\|XP_004133897.2\|	5.1e-13	51.04	PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Cucumis sativus]	[more]
gi\|659075382\|ref\|XP_008438113.1\|	5.1e-13	66.13	PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Cucumis melo]	[more]
gi\|449433109\|ref\|XP_004134340.1\|	1.5e-12	57.32	PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3 [Cucumis sativus]	[more]
gi\|659077733\|ref\|XP_008439355.1\|	1.5e-12	58.54	PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016040	NAD(P)-bd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g17060.1	Cp4.1LG03g17060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016040	NAD(P)-binding domain	GENE3D	G3DSA:3.40.50.720		coord: 60..95 score: 2.
None	No IPR available	PANTHER	PTHR10996	2-HYDROXYACID DEHYDROGENASE-RELATED	coord: 55..109 score: 3.8
None	No IPR available	PANTHER	PTHR10996:SF155	D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE-LIKE PROTEIN-RELATED	coord: 55..109 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG03g17060	CmaCh14G019980	Cucurbita maxima (Rimu)	cmacpeB283

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG03g17060	Cucurbita pepo (Zucchini)	cpecpeB184
Cp4.1LG03g17060	Cucurbita pepo (Zucchini)	cpecpeB482
Cp4.1LG03g17060	Cucumber (Gy14) v1	cgycpeB0682
Cp4.1LG03g17060	Cucumber (Gy14) v1	cgycpeB0791
Cp4.1LG03g17060	Cucumber (Gy14) v1	cgycpeB0965
Cp4.1LG03g17060	Cucurbita maxima (Rimu)	cmacpeB402
Cp4.1LG03g17060	Cucurbita maxima (Rimu)	cmacpeB639
Cp4.1LG03g17060	Cucurbita maxima (Rimu)	cmacpeB837
Cp4.1LG03g17060	Cucurbita moschata (Rifu)	cmocpeB245
Cp4.1LG03g17060	Cucurbita moschata (Rifu)	cmocpeB364
Cp4.1LG03g17060	Cucurbita moschata (Rifu)	cmocpeB787
Cp4.1LG03g17060	Wild cucumber (PI 183967)	cpecpiB611
Cp4.1LG03g17060	Wild cucumber (PI 183967)	cpecpiB625
Cp4.1LG03g17060	Wild cucumber (PI 183967)	cpecpiB633
Cp4.1LG03g17060	Cucumber (Chinese Long) v2	cpecuB609
Cp4.1LG03g17060	Cucumber (Chinese Long) v2	cpecuB629
Cp4.1LG03g17060	Bottle gourd (USVL1VR-Ls)	cpelsiB482
Cp4.1LG03g17060	Bottle gourd (USVL1VR-Ls)	cpelsiB506
Cp4.1LG03g17060	Watermelon (Charleston Gray)	cpewcgB556
Cp4.1LG03g17060	Watermelon (Charleston Gray)	cpewcgB559
Cp4.1LG03g17060	Watermelon (Charleston Gray)	cpewcgB565
Cp4.1LG03g17060	Watermelon (97103) v1	cpewmB613
Cp4.1LG03g17060	Watermelon (97103) v1	cpewmB617
Cp4.1LG03g17060	Watermelon (97103) v1	cpewmB625
Cp4.1LG03g17060	Silver-seed gourd	carcpeB0327
Cp4.1LG03g17060	Melon (DHL92) v3.5.1	cpemeB551
Cp4.1LG03g17060	Melon (DHL92) v3.5.1	cpemeB552
Cp4.1LG03g17060	Melon (DHL92) v3.5.1	cpemeB585
Cp4.1LG03g17060	Cucumber (Gy14) v2	cgybcpeB406
Cp4.1LG03g17060	Cucumber (Gy14) v2	cgybcpeB679
Cp4.1LG03g17060	Cucumber (Gy14) v2	cgybcpeB834
Cp4.1LG03g17060	Melon (DHL92) v3.6.1	cpemedB655
Cp4.1LG03g17060	Melon (DHL92) v3.6.1	cpemedB693
Cp4.1LG03g17060	Silver-seed gourd	carcpeB0685
Cp4.1LG03g17060	Silver-seed gourd	carcpeB0884
Cp4.1LG03g17060	Cucumber (Chinese Long) v3	cpecucB0759
Cp4.1LG03g17060	Cucumber (Chinese Long) v3	cpecucB0777
Cp4.1LG03g17060	Cucumber (Chinese Long) v3	cpecucB0785
Cp4.1LG03g17060	Wax gourd	cpewgoB0774