Cp4.1LG03g16520 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g16520
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionWRKY transcription factor, putative
LocationCp4.1LG03 : 13267612 .. 13269495 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACGCCCTTATAACCAAAAGTCAGCGCCTTCTTTTGTCTCTGTTTTTTTTTTTTTTTTTTTTNGCTAAATTATTTATTATTAAATGAATCTTATAATAAGATTAACATGAAATTTAAGAATAATACTATAGATTAAAAAAAAAAANAAAAAAAAACCTGTTTAAGAAGCTGAGACAAAGGTACAGATTCTCAGAGCAGAGTTCTGTCTATGAAAATGGAAGTCGATTGGGATCTTCACGCCGTGGTCAGAGGCTACTCCGCCGTGTCCTCCGCCGCCACCATTCCCTCTTCTGACTTTTACTCTGTTTCTTCCACTTCTAATAACTCTACCCCTTTTGCTTTTGGTAGAGACCTAACCAACCAAACAAACCATTTCTTCTCCCTTCAAGATCCATTCGAAGGGCCTAATTGTAATTCCACTGAAGAATTGCATGAGCTTTTCAAACCCTTTTCCCCTAAACCTCTACCTTCTCCGCCGCCACCGCCACCGTCTGCTCCGCTGCTGCTTTCTTCTCCGGCGGCTAAGATTCTGACCCATCAGAAGCAACGGCAGAACACCCATGTCCCCAAACAGCTCCATTCAGCCCCTGTTTCTGCGTCAAGATCTAAACGCCGGTGAGCATGATTCTTCAATTTCTTGATTCGGGAAATGGTTTTTTTGAAGCTAATTGATTGATCTTGTGATTTTTTTGATGCTCTGTTTTAGGAAGAATCAGCTGAAGAAAGTCTGTCAAGTTCCGGCGGAGTCTCTGTCTTCGGATATTTGGGCTTGGCGGAAATATGGCCAAAAACCCATTAAAGGATCTCCATATCCAAGGTTCGAGCTCGATTCAAACGCTGAAATTAGGGTTTTTTTTTAAGGTGTTGAAACTAATTTGGGTGATTTTGAAACAAAAAAAAAAAAAAAACAAACAAACAAATCAAAAAAAAAAAGAANTATTACAGATGTAGCAGTTCCAAGGGTTGCATGGCCCGGAAACAAGTCGAGCGGAACAGATCCGACCCGGGAATGTTCATAGTCACATACACGGCGGAGCACAACCACCCAGCGCCGACTCACCGGAATTCTCTCGCCGGCTCTACCCGTCAAAAGCCCAACACGCAAACGCCGGCTTCCTCCGGATCCGAAAAACCCGACCCGAAGCAGCCCGTTTGTTCGTCGGAAGACCAAAGTACGATCACAGAGAGCAAAGAAGAGAAAGAGGAATTGTTAGCCGAAGATGAAGAAGACGACGATCTGGGTGTCTCCGATTTGATCGTGAACGACGATTTCTATATGGGTTTTGAAGAACTCGACAGCCCAATCACCGACGAGTGTTTTTCCGATCAATTTCCGGCGAATTTCGAGCTTCCATGGTCGTTCAACGGAGACCCAGACAGCGAAATTGTAAAACTCCCCTGGTAAACTAAATTCCAACCCATTTTTTTTTCTGTTTTCAGATAGAGATCTGTAAAATCAAAGTTAGAGCAAAGATTTGAACAATGTTTTAACGAAGTCATGATGTTCTCTGTATCCATTTTTCTTTTCCCTGTAATTTTAGAACAAAAATTGTAGAAGAACAGTGATTTTGAAGTGCGAGATGGAGTGGGTTTTGTGGGAATTTTGGAGTTTGTTGACTAATGAAAAGAAATGGAATGGAATCAAGACATGGATGACGTGGTAATGCGTTGACAGAGATGGAAATTAGAGAGATTTTTGTGAAGAAAAAATGGAATATGCTCTTGTCCGAGGACAGCAATGGTGGAGAATCAGATTTAATTTAATTTATTTTATTTTATTTTTATTTTAAAAAAGATAATTCGGAATTTTTTCTCTTAGTTGATGCCAGTGGGTAAAGATTGTGTATAATTGCGTCCAAAACTTGATTTTGTTTTTATTTTTAT

mRNA sequence

TACGCCCTTATAACCAAAAGTCAGCGCCTTCTTTTGTCTCTGTTTTTTTTTTTTTTTTTTTTNGCTAAATTATTTATTATTAAATGAATCTTATAATAAGATTAACATGAAATTTAAGAATAATACTATAGATTAAAAAAAAAAANAAAAAAAAACCTGTTTAAGAAGCTGAGACAAAGGTACAGATTCTCAGAGCAGAGTTCTGTCTATGAAAATGGAAGTCGATTGGGATCTTCACGCCGTGGTCAGAGGCTACTCCGCCGTGTCCTCCGCCGCCACCATTCCCTCTTCTGACTTTTACTCTGTTTCTTCCACTTCTAATAACTCTACCCCTTTTGCTTTTGGTAGAGACCTAACCAACCAAACAAACCATTTCTTCTCCCTTCAAGATCCATTCGAAGGGCCTAATTGTAATTCCACTGAAGAATTGCATGAGCTTTTCAAACCCTTTTCCCCTAAACCTCTACCTTCTCCGCCGCCACCGCCACCGTCTGCTCCGCTGCTGCTTTCTTCTCCGGCGGCTAAGATTCTGACCCATCAGAAGCAACGGCAGAACACCCATGTCCCCAAACAGCTCCATTCAGCCCCTGTTTCTGCGTCAAGATCTAAACGCCGGAAGAATCAGCTGAAGAAAGTCTGTCAAGTTCCGGCGGAGTCTCTGTCTTCGGATATTTGGGCTTGGCGGAAATATGGCCAAAAACCCATTAAAGGATCTCCATATCCAAGGTTCGAGCTCGATTCAAACGCTGAAATTAGGGTTTTTTTTTAAGGTGTTGAAACTAATTTGGGTGATTTTGAAACAAAAAAAAAAAAAAAACAAACAAACAAATCAAAAAAAAAAAGAANTATTACAGATGTAGCAGTTCCAAGGGTTGCATGGCCCGGAAACAAGTCGAGCGGAACAGATCCGACCCGGGAATGTTCATAGTCACATACACGGCGGAGCACAACCACCCAGCGCCGACTCACCGGAATTCTCTCGCCGGCTCTACCCGTCAAAAGCCCAACACGCAAACGCCGGCTTCCTCCGGATCCGAAAAACCCGACCCGAAGCAGCCCGTTTGTTCGTCGGAAGACCAAAGTACGATCACAGAGAGCAAAGAAGAGAAAGAGGAATTGTTAGCCGAAGATGAAGAAGACGACGATCTGGGTGTCTCCGATTTGATCGTGAACGACGATTTCTATATGGGTTTTGAAGAACTCGACAGCCCAATCACCGACGAGTGTTTTTCCGATCAATTTCCGGCGAATTTCGAGCTTCCATGGTCGTTCAACGGAGACCCAGACAGCGAAATTGTAAAACTCCCCTGGTAAACTAAATTCCAACCCATTTTTTTTTCTGTTTTCAGATAGAGATCTGTAAAATCAAAGTTAGAGCAAAGATTTGAACAATGTTTTAACGAAGTCATGATGTTCTCTGTATCCATTTTTCTTTTCCCTGTAATTTTAGAACAAAAATTGTAGAAGAACAGTGATTTTGAAGTGCGAGATGGAGTGGGTTTTGTGGGAATTTTGGAGTTTGTTGACTAATGAAAAGAAATGGAATGGAATCAAGACATGGATGACGTGGTAATGCGTTGACAGAGATGGAAATTAGAGAGATTTTTGTGAAGAAAAAATGGAATATGCTCTTGTCCGAGGACAGCAATGGTGGAGAATCAGATTTAATTTAATTTATTTTATTTTATTTTTATTTTAAAAAAGATAATTCGGAATTTTTTCTCTTAGTTGATGCCAGTGGGTAAAGATTGTGTATAATTGCGTCCAAAACTTGATTTTGTTTTTATTTTTAT

Coding sequence (CDS)

ATGAAAATGGAAGTCGATTGGGATCTTCACGCCGTGGTCAGAGGCTACTCCGCCGTGTCCTCCGCCGCCACCATTCCCTCTTCTGACTTTTACTCTGTTTCTTCCACTTCTAATAACTCTACCCCTTTTGCTTTTGGTAGAGACCTAACCAACCAAACAAACCATTTCTTCTCCCTTCAAGATCCATTCGAAGGGCCTAATTGTAATTCCACTGAAGAATTGCATGAGCTTTTCAAACCCTTTTCCCCTAAACCTCTACCTTCTCCGCCGCCACCGCCACCGTCTGCTCCGCTGCTGCTTTCTTCTCCGGCGGCTAAGATTCTGACCCATCAGAAGCAACGGCAGAACACCCATGTCCCCAAACAGCTCCATTCAGCCCCTGTTTCTGCGTCAAGATCTAAACGCCGGAAGAATCAGCTGAAGAAAGTCTGTCAAGTTCCGGCGGAGTCTCTGTCTTCGGATATTTGGGCTTGGCGGAAATATGGCCAAAAACCCATTAAAGGATCTCCATATCCAAGGTTCGAGCTCGATTCAAACGCTGAAATTAGGGTTTTTTTTTAA

Protein sequence

MKMEVDWDLHAVVRGYSAVSSAATIPSSDFYSVSSTSNNSTPFAFGRDLTNQTNHFFSLQDPFEGPNCNSTEELHELFKPFSPKPLPSPPPPPPSAPLLLSSPAAKILTHQKQRQNTHVPKQLHSAPVSASRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPRFELDSNAEIRVFF
Homology
[Close]
BLAST of Cp4.1LG03g16520 vs. Swiss-Prot
Match: WRK22_ARATH (WRKY transcription factor 22 OS=Arabidopsis thaliana GN=WRKY22 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.4e-20
Identity = 76/182 (41.76%), Postives = 95/182 (52.20%), Query Frame = 1 

Query: 3   MEVDWDLHAVVRGYSAVSSAATIPSSDFYSVSSTSNNSTPFAFGRDLTNQTNHFFSLQDP 62
           M  DWDLHAVVRG SAVSS+AT   +  YS   +S+ +  F  GR               
Sbjct: 1   MADDWDLHAVVRGCSAVSSSAT---TTVYSPGVSSHTNPIFTVGRQ-------------- 60

Query: 63  FEGPNCNSTEELHELFKPFSPKPL---------PSPPPPPPSA--PLLLSSPAAKILTHQ 122
               N  S  E+ +L+ PF+ + +         P  P  P +   PL LS+ +  + T +
Sbjct: 61  ---SNAVSFGEIRDLYTPFTQESVVSSFSCINYPEEPRKPQNQKRPLSLSASSGSV-TSK 120

Query: 123 KQRQNTHVPKQLHSAPVSASRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPY 174
               NT             SRSKRRK Q KKVC V AE+L+SD+WAWRKYGQKPIKGSPY
Sbjct: 121 PSGSNT-------------SRSKRRKIQHKKVCHVAAEALNSDVWAWRKYGQKPIKGSPY 148

[Close]
BLAST of Cp4.1LG03g16520 vs. Swiss-Prot
Match: WRK27_ARATH (Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.1e-13
Identity = 75/208 (36.06%), Postives = 91/208 (43.75%), Query Frame = 1 

Query: 6   DWDLHAVVRGYSAVSSAATIPSSDFYSVSSTSNNSTPFAFGRDLTNQTNHFFSLQDPFEG 65
           DWDL AVVR  S                SS S  ++      D+ N        QDP   
Sbjct: 5   DWDLFAVVRSCS----------------SSVSTTNSCAGHEDDIGNCKQQ----QDPPPP 64

Query: 66  P---NCNSTEELHELFKPFSPKPLP-----SPPP--PPPSAPLLLSSPAAKILTHQKQ-- 125
           P     +S  EL +  KPF P         SPPP  PPP A    SSP+  IL  Q+Q  
Sbjct: 65  PLFQASSSCNELQDSCKPFLPVTTTTTTTWSPPPLLPPPKA----SSPSPNILLKQEQVL 124

Query: 126 ---------------------------RQNTHVPKQLHSAPVSASRSKRRKNQLKK-VCQ 174
                                       Q   + +Q    P+   RS++RKNQ K+ +C 
Sbjct: 125 LESQDQKPPLSVRVFPPSTSSSVFVFRGQRDQLLQQQSQPPL---RSRKRKNQQKRTICH 184

[Close]
BLAST of Cp4.1LG03g16520 vs. Swiss-Prot
Match: WRK29_ARATH (Probable WRKY transcription factor 29 OS=Arabidopsis thaliana GN=WRKY29 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.1e-10
Identity = 65/171 (38.01%), Postives = 85/171 (49.71%), Query Frame = 1 

Query: 8   DLHAVVRGYSAVSSAATIPSSDFYSVSSTSNNSTPFAFGRDLTNQTNHFFSLQDPFEGPN 67
           DL A+VRGYS         S D +S  S+   S  F     L  +T+ F+  +    G  
Sbjct: 5   DLEAIVRGYSG--------SGDAFSGESSGTFSPSFC----LPMETSSFYEPEMETSG-- 64

Query: 68  CNSTEELHELFKPFSPKPLPSPPPPPPSAPLLLSSPAAKILTHQKQRQNTHVPKQLHSAP 127
               +EL EL+KPF P    +      S P      +      +KQR +  +      A 
Sbjct: 65  ---LDELGELYKPFYPFSTQTILTSSVSLP----EDSKPFRDDKKQRSHGCLLSNGSRAD 124

Query: 128 ---VSASRSKR-RKNQLKKVC-QVPAESLSSDIWAWRKYGQKPIKGSPYPR 174
              +S S+SK+ +KNQ K+V  QV  E+L SD WAWRKYGQKPIKGSPYPR
Sbjct: 125 HIRISESKSKKSKKNQQKRVVEQVKEENLLSDAWAWRKYGQKPIKGSPYPR 154

[Close]
BLAST of Cp4.1LG03g16520 vs. Swiss-Prot
Match: WRK35_ARATH (Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.7e-09
Identity = 37/83 (44.58%), Postives = 48/83 (57.83%), Query Frame = 1 

Query: 101 SSPAAKILTHQKQRQNTHVPKQLHSAPVSASRSKRRKNQLKKVCQVPA----------ES 160
           +SP   +L       ++    Q+ S+P +    KRRK+Q KKV  +PA          E 
Sbjct: 154 NSPRNCLLVDNNNNTSSCSQVQISSSPRNLG-IKRRKSQAKKVVCIPAPAAMNSRSSGEV 213

Query: 161 LSSDIWAWRKYGQKPIKGSPYPR 174
           + SD+WAWRKYGQKPIKGSPYPR
Sbjct: 214 VPSDLWAWRKYGQKPIKGSPYPR 235

[Close]
BLAST of Cp4.1LG03g16520 vs. Swiss-Prot
Match: WRK16_ARATH (Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.1e-09
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 1 

Query: 128  VSASRSKRRKNQLKKV-CQVPAESLSSDIWAWRKYGQKPIKGSPYPR 174
            ++ S+S+R+ N+ K+V C V   S SSD+W WRKYGQKPIK SPYPR
Sbjct: 1154 ITRSKSRRKNNKEKRVVCVVDRGSRSSDLWVWRKYGQKPIKSSPYPR 1200

[Close]
BLAST of Cp4.1LG03g16520 vs. TrEMBL
Match: A0A0A0L7C1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G121580 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 3.0e-63
Identity = 139/180 (77.22%), Postives = 147/180 (81.67%), Query Frame = 1 

Query: 3   MEVDWDLHAVVRGYSAVSSAATI-PSSDFYSVSSTSNNST-PFAFGRDLTNQT--NHFFS 62
           MEVDWDLHAVVRGYSA  SAATI P+S   S SS+SNN   PF+FGRDLTN    NHFFS
Sbjct: 1   MEVDWDLHAVVRGYSAAPSAATIVPASSSSSSSSSSNNPVVPFSFGRDLTNNQMKNHFFS 60

Query: 63  LQDPFEGPNCNSTEELHELFKPFSPK--PLPSPPPPPPSAP---LLLSSPAAKILTHQKQ 122
           LQDPF+  NCNST+ELHELFKPF PK  P PSPPPPPP+ P   LL S PA KILTHQKQ
Sbjct: 61  LQDPFQPSNCNSTQELHELFKPFFPKSQPSPSPPPPPPAPPAPSLLSSPPAPKILTHQKQ 120

Query: 123 RQNTHVPKQLHSAPVSASRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPR 174
             +TH+PKQLHS   SA RSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPR
Sbjct: 121 --STHLPKQLHSTSASAPRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPR 178

[Close]
BLAST of Cp4.1LG03g16520 vs. TrEMBL
Match: E7CEW7_CUCSA (WRKY protein OS=Cucumis sativus GN=WRKY18 PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 8.7e-63
Identity = 138/181 (76.24%), Postives = 148/181 (81.77%), Query Frame = 1 

Query: 3   MEVDWDLHAVVRGYSAVSSAATI-PSSDFYSVSSTSNNS--TPFAFGRDLTNQT--NHFF 62
           MEVDWDLHAVVRGYSA  SAATI P+S   S SS+S+N+   PF+FGRDLTN    NHFF
Sbjct: 1   MEVDWDLHAVVRGYSAAPSAATIVPASSSSSSSSSSSNNPVVPFSFGRDLTNNQMKNHFF 60

Query: 63  SLQDPFEGPNCNSTEELHELFKPFSPK--PLPSPPPPPPSAP---LLLSSPAAKILTHQK 122
           SLQDPF+  NCNST+ELHELFKPF PK  P PSPPPPPP+ P   LL S PA KILTHQK
Sbjct: 61  SLQDPFQPSNCNSTQELHELFKPFFPKSQPSPSPPPPPPAPPAPSLLSSPPAPKILTHQK 120

Query: 123 QRQNTHVPKQLHSAPVSASRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYP 174
           Q  +TH+PKQLHS   SA RSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYP
Sbjct: 121 Q--STHLPKQLHSTSASAPRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYP 179

[Close]
BLAST of Cp4.1LG03g16520 vs. TrEMBL
Match: V4U2E6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020943mg PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.4e-30
Identity = 93/191 (48.69%), Postives = 121/191 (63.35%), Query Frame = 1 

Query: 3   MEVDWDLHAVVRGYSAVSSAATIPSSDFYSVSSTSNNSTPF------------AFGRDLT 62
           MEVDWDLHAVVRG ++ S  AT+ ++   + S+T++                  F R+ T
Sbjct: 1   MEVDWDLHAVVRGCNS-SVNATVTTTTATTTSTTTSFKDDLDTTKIQSWFSVSPFSREQT 60

Query: 63  NQTNHFFSLQDPFEGPNCNSTEELHELFKPFSPKPLPSPPPPPPSAPLL-----LSSPAA 122
           +   H F+L DPFE  N  + EELHEL+KPF PK  P P  P  S P+      ++S ++
Sbjct: 61  S--GHLFTLADPFEARN--AIEELHELYKPFFPKS-PQPISPKSSQPISSSISSINSSSS 120

Query: 123 KILTHQKQRQNTHVPKQLHSAPVSAS---RSKRRKNQLKKVCQVPAESLSSDIWAWRKYG 174
           K  T  KQ+Q  +  KQ H++ V++S   R+KRRKNQLK+VC VPAE LSSD+WAWRKYG
Sbjct: 121 KEQTQFKQQQPNN--KQSHASSVTSSTTPRTKRRKNQLKRVCHVPAEGLSSDVWAWRKYG 180

[Close]
BLAST of Cp4.1LG03g16520 vs. TrEMBL
Match: A0A067H396_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019126mg PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.4e-30
Identity = 93/191 (48.69%), Postives = 121/191 (63.35%), Query Frame = 1 

Query: 3   MEVDWDLHAVVRGYSAVSSAATIPSSDFYSVSSTSNNSTPF------------AFGRDLT 62
           MEVDWDLHAVVRG ++ S  AT+ ++   + S+T++                  F R+ T
Sbjct: 1   MEVDWDLHAVVRGCNS-SVNATVTTTTATTTSTTTSFKDDLDTTKIQSWFSVSPFSREQT 60

Query: 63  NQTNHFFSLQDPFEGPNCNSTEELHELFKPFSPKPLPSPPPPPPSAPLL-----LSSPAA 122
           +   H F+L DPFE  N  + EELHEL+KPF PK  P P  P  S P+      ++S ++
Sbjct: 61  S--GHLFTLADPFEARN--AIEELHELYKPFFPKS-PQPISPKSSQPISSSISSITSSSS 120

Query: 123 KILTHQKQRQNTHVPKQLHSAPVSAS---RSKRRKNQLKKVCQVPAESLSSDIWAWRKYG 174
           K  T  KQ+Q  +  KQ H++ V++S   R+KRRKNQLK+VC VPAE LSSD+WAWRKYG
Sbjct: 121 KEQTQFKQQQPNN--KQSHASSVTSSTTPRTKRRKNQLKRVCHVPAEGLSSDVWAWRKYG 180

[Close]
BLAST of Cp4.1LG03g16520 vs. TrEMBL
Match: A0A140H8P7_MANES (WRKY transcription factor 43 OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-29
Identity = 91/181 (50.28%), Postives = 108/181 (59.67%), Query Frame = 1 

Query: 3   MEVDWDLHAVVRGY---SAVSSAATIPSSDFYSVSSTSNNSTPFAFGRDLTNQTNH---- 62
           M+ DWDLHAVVRG    S  SS++T  +S   S S++S     F F    ++  +     
Sbjct: 1   MDDDWDLHAVVRGCTTTSYASSSSTAAASITTSDSASSFTRPDFCFSSSSSSFASEPPGP 60

Query: 63  FFSLQDPFEGPNCNSTEELHELFKPFSPKP---LPSPPPPPPSAPLLLSSPAAKILTHQK 122
            FSL DPFE    N   ELHEL+KPF P+    L SP P P     L S   +K  T  K
Sbjct: 61  LFSLPDPFE--TRNGIGELHELYKPFFPRSHQTLYSPQPQPAPISPLSSLSVSKEQTQIK 120

Query: 123 QRQNTHVPKQLHSAPVSASRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYP 174
           Q + +H      +A   A RSKRRKNQLKK+C VPAESLSSD+WAWRKYGQKPIKGSPYP
Sbjct: 121 QPKQSHAASLTSTANSHAPRSKRRKNQLKKICHVPAESLSSDVWAWRKYGQKPIKGSPYP 179

[Close]
BLAST of Cp4.1LG03g16520 vs. TAIR10
Match: AT4G01250.1 (AT4G01250.1 WRKY family transcription factor)

HSP 1 Score: 99.8 bits (247), Expect = 1.9e-21
Identity = 76/182 (41.76%), Postives = 95/182 (52.20%), Query Frame = 1 

Query: 3   MEVDWDLHAVVRGYSAVSSAATIPSSDFYSVSSTSNNSTPFAFGRDLTNQTNHFFSLQDP 62
           M  DWDLHAVVRG SAVSS+AT   +  YS   +S+ +  F  GR               
Sbjct: 1   MADDWDLHAVVRGCSAVSSSAT---TTVYSPGVSSHTNPIFTVGRQ-------------- 60

Query: 63  FEGPNCNSTEELHELFKPFSPKPL---------PSPPPPPPSA--PLLLSSPAAKILTHQ 122
               N  S  E+ +L+ PF+ + +         P  P  P +   PL LS+ +  + T +
Sbjct: 61  ---SNAVSFGEIRDLYTPFTQESVVSSFSCINYPEEPRKPQNQKRPLSLSASSGSV-TSK 120

Query: 123 KQRQNTHVPKQLHSAPVSASRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPY 174
               NT             SRSKRRK Q KKVC V AE+L+SD+WAWRKYGQKPIKGSPY
Sbjct: 121 PSGSNT-------------SRSKRRKIQHKKVCHVAAEALNSDVWAWRKYGQKPIKGSPY 148

[Close]
BLAST of Cp4.1LG03g16520 vs. TAIR10
Match: AT5G52830.1 (AT5G52830.1 WRKY DNA-binding protein 27)

HSP 1 Score: 76.3 bits (186), Expect = 2.3e-14
Identity = 75/208 (36.06%), Postives = 91/208 (43.75%), Query Frame = 1 

Query: 6   DWDLHAVVRGYSAVSSAATIPSSDFYSVSSTSNNSTPFAFGRDLTNQTNHFFSLQDPFEG 65
           DWDL AVVR  S                SS S  ++      D+ N        QDP   
Sbjct: 5   DWDLFAVVRSCS----------------SSVSTTNSCAGHEDDIGNCKQQ----QDPPPP 64

Query: 66  P---NCNSTEELHELFKPFSPKPLP-----SPPP--PPPSAPLLLSSPAAKILTHQKQ-- 125
           P     +S  EL +  KPF P         SPPP  PPP A    SSP+  IL  Q+Q  
Sbjct: 65  PLFQASSSCNELQDSCKPFLPVTTTTTTTWSPPPLLPPPKA----SSPSPNILLKQEQVL 124

Query: 126 ---------------------------RQNTHVPKQLHSAPVSASRSKRRKNQLKK-VCQ 174
                                       Q   + +Q    P+   RS++RKNQ K+ +C 
Sbjct: 125 LESQDQKPPLSVRVFPPSTSSSVFVFRGQRDQLLQQQSQPPL---RSRKRKNQQKRTICH 184

[Close]
BLAST of Cp4.1LG03g16520 vs. TAIR10
Match: AT4G23550.1 (AT4G23550.1 WRKY family transcription factor)

HSP 1 Score: 68.2 bits (165), Expect = 6.2e-12
Identity = 65/171 (38.01%), Postives = 85/171 (49.71%), Query Frame = 1 

Query: 8   DLHAVVRGYSAVSSAATIPSSDFYSVSSTSNNSTPFAFGRDLTNQTNHFFSLQDPFEGPN 67
           DL A+VRGYS         S D +S  S+   S  F     L  +T+ F+  +    G  
Sbjct: 5   DLEAIVRGYSG--------SGDAFSGESSGTFSPSFC----LPMETSSFYEPEMETSG-- 64

Query: 68  CNSTEELHELFKPFSPKPLPSPPPPPPSAPLLLSSPAAKILTHQKQRQNTHVPKQLHSAP 127
               +EL EL+KPF P    +      S P      +      +KQR +  +      A 
Sbjct: 65  ---LDELGELYKPFYPFSTQTILTSSVSLP----EDSKPFRDDKKQRSHGCLLSNGSRAD 124

Query: 128 ---VSASRSKR-RKNQLKKVC-QVPAESLSSDIWAWRKYGQKPIKGSPYPR 174
              +S S+SK+ +KNQ K+V  QV  E+L SD WAWRKYGQKPIKGSPYPR
Sbjct: 125 HIRISESKSKKSKKNQQKRVVEQVKEENLLSDAWAWRKYGQKPIKGSPYPR 154

[Close]
BLAST of Cp4.1LG03g16520 vs. TAIR10
Match: AT2G34830.1 (AT2G34830.1 WRKY DNA-binding protein 35)

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10
Identity = 37/83 (44.58%), Postives = 48/83 (57.83%), Query Frame = 1 

Query: 101 SSPAAKILTHQKQRQNTHVPKQLHSAPVSASRSKRRKNQLKKVCQVPA----------ES 160
           +SP   +L       ++    Q+ S+P +    KRRK+Q KKV  +PA          E 
Sbjct: 154 NSPRNCLLVDNNNNTSSCSQVQISSSPRNLG-IKRRKSQAKKVVCIPAPAAMNSRSSGEV 213

Query: 161 LSSDIWAWRKYGQKPIKGSPYPR 174
           + SD+WAWRKYGQKPIKGSPYPR
Sbjct: 214 VPSDLWAWRKYGQKPIKGSPYPR 235

[Close]
BLAST of Cp4.1LG03g16520 vs. TAIR10
Match: AT5G45050.1 (AT5G45050.1 Disease resistance protein (TIR-NBS-LRR class))

HSP 1 Score: 62.4 bits (150), Expect = 3.4e-10
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 1 

Query: 128  VSASRSKRRKNQLKKV-CQVPAESLSSDIWAWRKYGQKPIKGSPYPR 174
            ++ S+S+R+ N+ K+V C V   S SSD+W WRKYGQKPIK SPYPR
Sbjct: 1154 ITRSKSRRKNNKEKRVVCVVDRGSRSSDLWVWRKYGQKPIKSSPYPR 1200

[Close]
BLAST of Cp4.1LG03g16520 vs. NCBI nr
Match: gi|659075140|ref|XP_008437986.1| (PREDICTED: WRKY transcription factor 22 [Cucumis melo])

HSP 1 Score: 255.8 bits (652), Expect = 6.0e-65
Identity = 141/181 (77.90%), Postives = 147/181 (81.22%), Query Frame = 1 

Query: 3   MEVDWDLHAVVRGYSAVSSAATI-PSSDFYSVSSTSNNSTPFAFGRDLTNQT--NHFFSL 62
           MEVDWDLHAVVRGYSA  SAATI PSS     SS SNNS PF+FGRDLTN    NHFFSL
Sbjct: 1   MEVDWDLHAVVRGYSAAPSAATIVPSS-----SSFSNNSVPFSFGRDLTNNQTKNHFFSL 60

Query: 63  QDPFEGPNCNSTEELHELFKPFSPK-------PLPSPPPPPPSAPLLLSSPAAKILTHQK 122
           QDPF+  NCNST+ELHELFKPF PK       P P PPPPPP+AP LLSSPA KILTH K
Sbjct: 61  QDPFQPSNCNSTQELHELFKPFFPKSQPSSSSPTPPPPPPPPAAPPLLSSPAPKILTHHK 120

Query: 123 QRQNTHVPKQLHSAPVSASRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYP 174
           Q  +TH+PKQLHS  VSA RSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYP
Sbjct: 121 Q--STHLPKQLHSTSVSAPRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYP 174

[Close]
BLAST of Cp4.1LG03g16520 vs. NCBI nr
Match: gi|700201349|gb|KGN56482.1| (hypothetical protein Csa_3G121580 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 4.3e-63
Identity = 139/180 (77.22%), Postives = 147/180 (81.67%), Query Frame = 1 

Query: 3   MEVDWDLHAVVRGYSAVSSAATI-PSSDFYSVSSTSNNST-PFAFGRDLTNQT--NHFFS 62
           MEVDWDLHAVVRGYSA  SAATI P+S   S SS+SNN   PF+FGRDLTN    NHFFS
Sbjct: 1   MEVDWDLHAVVRGYSAAPSAATIVPASSSSSSSSSSNNPVVPFSFGRDLTNNQMKNHFFS 60

Query: 63  LQDPFEGPNCNSTEELHELFKPFSPK--PLPSPPPPPPSAP---LLLSSPAAKILTHQKQ 122
           LQDPF+  NCNST+ELHELFKPF PK  P PSPPPPPP+ P   LL S PA KILTHQKQ
Sbjct: 61  LQDPFQPSNCNSTQELHELFKPFFPKSQPSPSPPPPPPAPPAPSLLSSPPAPKILTHQKQ 120

Query: 123 RQNTHVPKQLHSAPVSASRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPR 174
             +TH+PKQLHS   SA RSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPR
Sbjct: 121 --STHLPKQLHSTSASAPRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPR 178

[Close]
BLAST of Cp4.1LG03g16520 vs. NCBI nr
Match: gi|525507108|ref|NP_001267594.1| (WRKY transcription factor 22-like [Cucumis sativus])

HSP 1 Score: 248.1 bits (632), Expect = 1.2e-62
Identity = 138/181 (76.24%), Postives = 148/181 (81.77%), Query Frame = 1 

Query: 3   MEVDWDLHAVVRGYSAVSSAATI-PSSDFYSVSSTSNNS--TPFAFGRDLTNQT--NHFF 62
           MEVDWDLHAVVRGYSA  SAATI P+S   S SS+S+N+   PF+FGRDLTN    NHFF
Sbjct: 1   MEVDWDLHAVVRGYSAAPSAATIVPASSSSSSSSSSSNNPVVPFSFGRDLTNNQMKNHFF 60

Query: 63  SLQDPFEGPNCNSTEELHELFKPFSPK--PLPSPPPPPPSAP---LLLSSPAAKILTHQK 122
           SLQDPF+  NCNST+ELHELFKPF PK  P PSPPPPPP+ P   LL S PA KILTHQK
Sbjct: 61  SLQDPFQPSNCNSTQELHELFKPFFPKSQPSPSPPPPPPAPPAPSLLSSPPAPKILTHQK 120

Query: 123 QRQNTHVPKQLHSAPVSASRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYP 174
           Q  +TH+PKQLHS   SA RSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYP
Sbjct: 121 Q--STHLPKQLHSTSASAPRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYP 179

[Close]
BLAST of Cp4.1LG03g16520 vs. NCBI nr
Match: gi|697098460|ref|XP_009626813.1| (PREDICTED: WRKY transcription factor 22-like [Nicotiana tomentosiformis])

HSP 1 Score: 139.8 bits (351), Expect = 4.8e-30
Identity = 97/204 (47.55%), Postives = 117/204 (57.35%), Query Frame = 1 

Query: 3   MEVDWDLHAVVRGYSAVSSAATIPSSDFYSVSSTSNNSTPFAFGRDLTNQTNHFFSLQDP 62
           ME DWDLHAVVRG +A S+AAT         ++T+N++    F      Q  +FFS QDP
Sbjct: 1   MEDDWDLHAVVRGCAASSTAAT--------TTATTNSAATTTFCSFQPRQDGNFFSFQDP 60

Query: 63  F----EGPNCNSTEELHELFKPFSPKPLPSPPPPP-----PSAPLLLS------SPAAKI 122
           F    + PN  + EELH L+KPF PK  P   PP      P +PL +       SP   +
Sbjct: 61  FVPRFDNPNNTAFEELHNLYKPFFPKSQPQQQPPLSPQNIPISPLSVIGGLQDLSPQQTL 120

Query: 123 LTHQKQRQ----NTHV---PKQLHSAPVSAS-----------RSKRRKNQLKKVCQVPAE 174
           +  Q+Q+     NT V   PKQ  S   SA+           R KRRKNQLKKVCQVPAE
Sbjct: 121 IKQQQQQYIHQLNTRVLTQPKQSLSVNGSANSTTSVPHTQSPRPKRRKNQLKKVCQVPAE 180

[Close]
BLAST of Cp4.1LG03g16520 vs. NCBI nr
Match: gi|641867630|gb|KDO86314.1| (hypothetical protein CISIN_1g019126mg [Citrus sinensis])

HSP 1 Score: 138.7 bits (348), Expect = 1.1e-29
Identity = 93/191 (48.69%), Postives = 121/191 (63.35%), Query Frame = 1 

Query: 3   MEVDWDLHAVVRGYSAVSSAATIPSSDFYSVSSTSNNSTPF------------AFGRDLT 62
           MEVDWDLHAVVRG ++ S  AT+ ++   + S+T++                  F R+ T
Sbjct: 1   MEVDWDLHAVVRGCNS-SVNATVTTTTATTTSTTTSFKDDLDTTKIQSWFSVSPFSREQT 60

Query: 63  NQTNHFFSLQDPFEGPNCNSTEELHELFKPFSPKPLPSPPPPPPSAPLL-----LSSPAA 122
           +   H F+L DPFE  N  + EELHEL+KPF PK  P P  P  S P+      ++S ++
Sbjct: 61  S--GHLFTLADPFEARN--AIEELHELYKPFFPKS-PQPISPKSSQPISSSISSITSSSS 120

Query: 123 KILTHQKQRQNTHVPKQLHSAPVSAS---RSKRRKNQLKKVCQVPAESLSSDIWAWRKYG 174
           K  T  KQ+Q  +  KQ H++ V++S   R+KRRKNQLK+VC VPAE LSSD+WAWRKYG
Sbjct: 121 KEQTQFKQQQPNN--KQSHASSVTSSTTPRTKRRKNQLKRVCHVPAEGLSSDVWAWRKYG 180

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g16520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WRK22_ARATH3.4e-2041.76WRKY transcription factor 22 OS=Arabidopsis thaliana GN=WRKY22 PE=2 SV=1[more]
WRK27_ARATH4.1e-1336.06Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=... [more]
WRK29_ARATH1.1e-1038.01Probable WRKY transcription factor 29 OS=Arabidopsis thaliana GN=WRKY29 PE=2 SV=... [more]
WRK35_ARATH2.7e-0944.58Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=... [more]
WRK16_ARATH6.1e-0959.57Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=... [more]
BLAST of Cp4.1LG03g16520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7C1_CUCSA3.0e-6377.22Uncharacterized protein OS=Cucumis sativus GN=Csa_3G121580 PE=4 SV=1[more]
E7CEW7_CUCSA8.7e-6376.24WRKY protein OS=Cucumis sativus GN=WRKY18 PE=2 SV=1[more]
V4U2E6_9ROSI7.4e-3048.69Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020943mg PE=4 SV=1[more]
A0A067H396_CITSI7.4e-3048.69Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019126mg PE=4 SV=1[more]
A0A140H8P7_MANES1.7e-2950.28WRKY transcription factor 43 OS=Manihot esculenta PE=2 SV=1[more]
BLAST of Cp4.1LG03g16520 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G01250.11.9e-2141.76 WRKY family transcription factor[more]
AT5G52830.12.3e-1436.06 WRKY DNA-binding protein 27[more]
AT4G23550.16.2e-1238.01 WRKY family transcription factor[more]
AT2G34830.11.5e-1044.58 WRKY DNA-binding protein 35[more]
AT5G45050.13.4e-1059.57 Disease resistance protein (TIR-NBS-LRR class)[more]
BLAST of Cp4.1LG03g16520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075140|ref|XP_008437986.1|6.0e-6577.90PREDICTED: WRKY transcription factor 22 [Cucumis melo][more]
gi|700201349|gb|KGN56482.1|4.3e-6377.22hypothetical protein Csa_3G121580 [Cucumis sativus][more]
gi|525507108|ref|NP_001267594.1|1.2e-6276.24WRKY transcription factor 22-like [Cucumis sativus][more]
gi|697098460|ref|XP_009626813.1|4.8e-3047.55PREDICTED: WRKY transcription factor 22-like [Nicotiana tomentosiformis][more]
gi|641867630|gb|KDO86314.1|1.1e-2948.69hypothetical protein CISIN_1g019126mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003657WRKY_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0010150 leaf senescence
biological_process GO:0010200 response to chitin
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g16520.1Cp4.1LG03g16520.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003657WRKY domainGENE3DG3DSA:2.20.25.80coord: 143..173
score: 9.
IPR003657WRKY domainPFAMPF03106WRKYcoord: 154..173
score: 7.
IPR003657WRKY domainSMARTSM00774WRKY_clscoord: 152..184
score: 9.
IPR003657WRKY domainPROFILEPS50811WRKYcoord: 147..173
score: 13
IPR003657WRKY domainunknownSSF118290WRKY DNA-binding domaincoord: 150..174
score: 1.8
NoneNo IPR availablePANTHERPTHR32096FAMILY NOT NAMEDcoord: 3..173
score: 5.7
NoneNo IPR availablePANTHERPTHR32096:SF31WRKY TRANSCRIPTION FACTOR 22coord: 3..173
score: 5.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g16520Cucsa.258700Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g16520CmaCh14G020670Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g16520CmaCh06G010870Cucurbita maxima (Rimu)cmacpeB833
Cp4.1LG03g16520CmoCh06G011130Cucurbita moschata (Rifu)cmocpeB784
Cp4.1LG03g16520CmoCh14G021260Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g16520Cla021207Watermelon (97103) v1cpewmB613
Cp4.1LG03g16520Csa3G121580Cucumber (Chinese Long) v2cpecuB609
Cp4.1LG03g16520MELO3C006081Melon (DHL92) v3.5.1cpemeB585
Cp4.1LG03g16520ClCG05G001250Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g16520CSPI03G08490Wild cucumber (PI 183967)cpecpiB611
Cp4.1LG03g16520Lsi05G020690Bottle gourd (USVL1VR-Ls)cpelsiB506
Cp4.1LG03g16520MELO3C005843.2Melon (DHL92) v3.6.1cpemedB651
Cp4.1LG03g16520MELO3C006081.2Melon (DHL92) v3.6.1cpemedB693
Cp4.1LG03g16520CsaV3_5G001010Cucumber (Chinese Long) v3cpecucB0774
Cp4.1LG03g16520CsaV3_3G008610Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g16520Bhi01G000239Wax gourdcpewgoB0781
Cp4.1LG03g16520CsGy3G008590Cucumber (Gy14) v2cgybcpeB406
Cp4.1LG03g16520Carg20979Silver-seed gourdcarcpeB0691
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g16520Cp4.1LG05g06330Cucurbita pepo (Zucchini)cpecpeB479
Cp4.1LG03g16520Cp4.1LG08g01440Cucurbita pepo (Zucchini)cpecpeB488
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g16520Cucurbita pepo (Zucchini)cpecpeB052
Cp4.1LG03g16520Cucurbita pepo (Zucchini)cpecpeB242
Cp4.1LG03g16520Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG03g16520Cucumber (Gy14) v1cgycpeB0367
Cp4.1LG03g16520Cucurbita maxima (Rimu)cmacpeB639
Cp4.1LG03g16520Cucurbita maxima (Rimu)cmacpeB831
Cp4.1LG03g16520Cucurbita moschata (Rifu)cmocpeB589
Cp4.1LG03g16520Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g16520Wild cucumber (PI 183967)cpecpiB624
Cp4.1LG03g16520Wild cucumber (PI 183967)cpecpiB632
Cp4.1LG03g16520Cucumber (Chinese Long) v2cpecuB622
Cp4.1LG03g16520Bottle gourd (USVL1VR-Ls)cpelsiB483
Cp4.1LG03g16520Bottle gourd (USVL1VR-Ls)cpelsiB486
Cp4.1LG03g16520Watermelon (Charleston Gray)cpewcgB556
Cp4.1LG03g16520Watermelon (97103) v1cpewmB616
Cp4.1LG03g16520Watermelon (97103) v1cpewmB612
Cp4.1LG03g16520Melon (DHL92) v3.5.1cpemeB554
Cp4.1LG03g16520Cucumber (Gy14) v2cgybcpeB678
Cp4.1LG03g16520Melon (DHL92) v3.6.1cpemedB658