Cp4.1LG03g16440 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGAGCGACGTGTGTCACGCAAGTCTGCCTGAGAAAAAAAAAAAACAAAAAACAAAAAACGAAGAAAAATCTTCAGCAGACAGATCAGCCTCGCCCCCCATCACTGTTGCAATACGATGACCTCCCAAATTGTGGATGATTTATCTCCTGTTCTTAATCACACATGAAAAAACCAAGCAATTCCCTTAAAACCTTCCATTTCCCACCAATTTTCCCTTTTCAAAACCCTAATTTTCGCCCCCAGTTTGTTGTTTTCCGGAGGCCTTACCGGTTTTCTCTTCCGATGATGCCCAATATTTGAGAAAACTGATTCCATTACGTTGTACTTTCTCATTCTCTTGAATCGGAGCCCGAATTCGAGGATCTGATGGATTTCCAAGAAAGAGATTCGTCCATGGCGATTTCCAGGACCTCGAATTCGTATATCAATGGACCTTCCTTGAGCCATTCTGCTTGGTTTGAGGTTCGGCTCTTCTACGTTCGGATTTCTCCCTGTGTGATTGATAGCGTTCCCGACCATCTTAATCTGCGTCACCTTCGACGCGAAATTGGTGTTTCCCTTGAGATTAACGGGTCTCAAATTCCGGCCTCCGACTCTGTCTCTATAGCCCTTCGCCGCGATCGGCTCAACAAGGAATCCTCGGAGGTTACATACGTTAGCACCGATAGCATTCGGGTTACGGGGGGTGTGGAGTTCGAGGTGTATGAGAATGAGGATTTGATTCTCTGTGGGTCTTTGGAACGAATCGAGACCAACTGGATTAATGGGAGCGTTGGATTGGAGAACAATTCAAAGACAGGTTGGACTATGGAATGTTTCATGGCTGCGTCCATGTGTTCGGGTTCGTCGGCCTTTTTCCAGCCTAAACTTGGGGTATCCTCACCGGCAATTGAGGTTTATATCGCCGGTTGTTGTTCCGGTATGCCTGTGATATTGACGCAGACGATTCAGGTTAGTCCTCGGCGGAAGAACTTGAGGCAATGTGCCCTGGATGCAATTCCGGAGGATGAAGAAGTGGGAAAGGAGGAGAATACAAGTAATGGGTTGATTCGGCACCAGAAAGTGCAGGTAAAGTTTTGTTCTCTTCTTATATTTTTGTTCTCAATTCTTTCGGCGTTGTATGAGCTTCAGCAATTCTAGATTGCACATCGCATTTTGTTGGTGGATATAAATTAGTTTGTTGATCCACGAACAATAATTCTCCGAATCTACACAACTCAGGACCGGTAAGAGTTGCAGCAGATGCTGTTCATGAACTTCCACATGATATTGAGCTAAGATCATTGTTTTTGTAGTTATTTATTTATTTTTGATAACGGGGTATGAGGATCCCTTAACTTACATCCTCCAGGACTTCACACCTTTCATTTTAAATTATTGAGCTCTCTACATGGGCTTGAATCCAGCATAATAGTGGTCGTCTTGCCTCATAATTCTCGGTATTGAATTTCCATACGCCATAGAGTTGGGTGACATTTTGAGTAGTGAATCTTCCAATGTATCATGCTCTTCACAGTATTTAATGCTTTAGAAAGAACCAAAATGTTCAAAATTTCATGGTATAATGCTCATACACAACATGTGTGATAGGAATAAAAGTGTTTTTCTCTCTTTACTGTAGTTTCTGGTTGTGAATTCAGTTCGTGTTCTCCTCTGTTGCTTGAACACTACTCTTCATATTATTGCTGTTAAAATCTTGGTTGTCTTACGGCTGTTGATTGACTGTATTGTACTCGATCAATCGTTCCAAACTCTAATTAAGTTATTATGTACCCCTGTGATTTGTCGAGTTCTTGTGAGGTGTGGAACACGGTTTAATTGATTTTTACACTACTGATTACATTCCTTTCTTGGATTCATGTAGATGATAGAGTCTGAAGTTGATGATTATGACCCAGATGGTAAAATGGGGCATGGTTTCTACAGTGATGATATGTACACTGGCGAAGATGGGCAGCTTTCATGGTTCAATGCAGGGGTTAGAGTGGGTGTTGGTATTGGTCTCGGTGTGTGCCTCGGGGTTGGAATCGGTGTCGGCTTGCTCATGCGTTCATACCAAACCACAACAAGACATTTTAGACGACGGTTTACGTAATTAGGACACTCTTACTTGGGAATCTGGTGGCTTTTTTCACTAATGAATAAAGGGGAAGAGATTTTCGGGTTCCCATTTCCCGGTCGTTAAGCCTGAACATAACATAAGATAAAGCAGGCAAGGAAGTAATACGTTGATAGGACTTTGAACAGAATCAAGAAGTCATTGACAGCCACTCGAGGAAGTTGAGCTTAACTTATTCTGTAGGCAGGATGAAAGCTGTACAGTCTTTCCTTTTTGTTCTTTTCTCTGCACGAAGCACTTTCTCTCGGGGACGGGCAGCAGAGACCGACCTTCTTGCTCATTTCCATGGCTGCTTACTTTTTATATGAATATGTTTCTTTTCATAAAATGCAGGGCTCGTGTCGGTGCTTATCCTCAACGGATGTTACCTTTCATCGAAGGGTAGCAACGGAACACAACCCAATGGATTTGCTAGGACAGAATAAGCTTGTGTGAGGTTTGACTTCATCTTACAAGAGTATCTACTGTTCTTTACCGGTTCTGTATAGGATACTACCTCTTCTTTTTTTCGCCTCTCTGGGGTTTAATCACAATTATAGTCGCTTCACATTGTCATTTTTCCGTATACTTCGATTTGTTTCGATTTAGTCTCGGTAGTTTTGTGAACATATTAGTTTAGTTTCTGAGGTCGATTATCCAGTTAAATCGTATCGAAAAGTTGGGGCTTAGTACAGGTGGGGAGTTGCGATGACAGTTTTATATGTCGCACCGTTACGCACTAAGTCCTCATATATGGATGTATTTCGATTTCTATTTAACTGGATAGTTCGATTTTGAGACAGAATTGATATTTTTGCGAAAGTACAAGAACTAAAACGGAACAAATGAAAAGACGGGATGATTCAAATCATAAGTACTAGAGTTACATTTTTTTCCCTTTTTGTTTTTCGTTTGAGTTGTTCTGGCCCAAAATTTTCTTACCTTTCATTGTGTAAAGTTCTTAACTTTATGTGGAAGAGTTCTGTGAAATGTTATATGCATCAATCAATCTCAAGCAGCGCCTTGAGCTCATTTCATTATCAT TGGAGCGACGTGTGTCACGCAAGTCTGCCTGAGAAAAAAAAAAAACAAAAAACAAAAAACGAAGAAAAATCTTCAGCAGACAGATCAGCCTCGCCCCCCATCACTGTTGCAATACGATGACCTCCCAAATTGTGGATGATTTATCTCCTGTTCTTAATCACACATGAAAAAACCAAGCAATTCCCTTAAAACCTTCCATTTCCCACCAATTTTCCCTTTTCAAAACCCTAATTTTCGCCCCCAGTTTGTTGTTTTCCGGAGGCCTTACCGGTTTTCTCTTCCGATGATGCCCAATATTTGAGAAAACTGATTCCATTACGTTGTACTTTCTCATTCTCTTGAATCGGAGCCCGAATTCGAGGATCTGATGGATTTCCAAGAAAGAGATTCGTCCATGGCGATTTCCAGGACCTCGAATTCGTATATCAATGGACCTTCCTTGAGCCATTCTGCTTGGTTTGAGGTTCGGCTCTTCTACGTTCGGATTTCTCCCTGTGTGATTGATAGCGTTCCCGACCATCTTAATCTGCGTCACCTTCGACGCGAAATTGGTGTTTCCCTTGAGATTAACGGGTCTCAAATTCCGGCCTCCGACTCTGTCTCTATAGCCCTTCGCCGCGATCGGCTCAACAAGGAATCCTCGGAGGTTACATACGTTAGCACCGATAGCATTCGGGTTACGGGGGGTGTGGAGTTCGAGGTGTATGAGAATGAGGATTTGATTCTCTGTGGGTCTTTGGAACGAATCGAGACCAACTGGATTAATGGGAGCGTTGGATTGGAGAACAATTCAAAGACAGGTTGGACTATGGAATGTTTCATGGCTGCGTCCATGTGTTCGGGTTCGTCGGCCTTTTTCCAGCCTAAACTTGGGGTATCCTCACCGGCAATTGAGGTTTATATCGCCGGTTGTTGTTCCGGTATGCCTGTGATATTGACGCAGACGATTCAGGTTAGTCCTCGGCGGAAGAACTTGAGGCAATGTGCCCTGGATGCAATTCCGGAGGATGAAGAAGTGGGAAAGGAGGAGAATACAAGTAATGGGTTGATTCGGCACCAGAAAGTGCAGATGATAGAGTCTGAAGTTGATGATTATGACCCAGATGGTAAAATGGGGCATGGTTTCTACAGTGATGATATGTACACTGGCGAAGATGGGCAGCTTTCATGGTTCAATGCAGGGGTTAGAGTGGGTGTTGGTATTGGTCTCGGTGTGTGCCTCGGGGTTGGAATCGGTGTCGGCTTGCTCATGCGTTCATACCAAACCACAACAAGACATTTTAGACGACGGTTTACGTAATTAGGACACTCTTACTTGGGAATCTGGTGGCTTTTTTCACTAATGAATAAAGGGGAAGAGATTTTCGGGTTCCCATTTCCCGGTCGTTAAGCCTGAACATAACATAAGATAAAGCAGGCAAGGAAGTAATACGTTGATAGGACTTTGAACAGAATCAAGAAGTCATTGACAGCCACTCGAGGAAGTTGAGCTTAACTTATTCTGTAGGCAGGATGAAAGCTGTACAGTCTTTCCTTTTTGTTCTTTTCTCTGCACGAAGCACTTTCTCTCGGGGACGGGCAGCAGAGACCGACCTTCTTGCTCATTTCCATGGCTGCTTACTTTTTATATGAATATGTTTCTTTTCATAAAATGCAGGGCTCGTGTCGGTGCTTATCCTCAACGGATGTTACCTTTCATCGAAGGGTAGCAACGGAACACAACCCAATGGATTTGCTAGGACAGAATAAGCTTGTGTGAGGTTTGACTTCATCTTACAAGAGTATCTACTGTTCTTTACCGGTTCTGTATAGGATACTACCTCTTCTTTTTTTCGCCTCTCTGGGGTTTAATCACAATTATAGTCGCTTCACATTGTCATTTTTCCGTATACTTCGATTTGTTTCGATTTAGTCTCGGTAGTTTTGTGAACATATTAGTTTAGTTTCTGAGGTCGATTATCCAGTTAAATCGTATCGAAAAGTTGGGGCTTAGTACAGGTGGGGAGTTGCGATGACAGTTTTATATGTCGCACCGTTACGCACTAAGTCCTCATATATGGATGTATTTCGATTTCTATTTAACTGGATAGTTCGATTTTGAGACAGAATTGATATTTTTGCGAAAGTACAAGAACTAAAACGGAACAAATGAAAAGACGGGATGATTCAAATCATAAGTACTAGAGTTACATTTTTTTCCCTTTTTGTTTTTCGTTTGAGTTGTTCTGGCCCAAAATTTTCTTACCTTTCATTGTGTAAAGTTCTTAACTTTATGTGGAAGAGTTCTGTGAAATGTTATATGCATCAATCAATCTCAAGCAGCGCCTTGAGCTCATTTCATTATCAT ATGGATTTCCAAGAAAGAGATTCGTCCATGGCGATTTCCAGGACCTCGAATTCGTATATCAATGGACCTTCCTTGAGCCATTCTGCTTGGTTTGAGGTTCGGCTCTTCTACGTTCGGATTTCTCCCTGTGTGATTGATAGCGTTCCCGACCATCTTAATCTGCGTCACCTTCGACGCGAAATTGGTGTTTCCCTTGAGATTAACGGGTCTCAAATTCCGGCCTCCGACTCTGTCTCTATAGCCCTTCGCCGCGATCGGCTCAACAAGGAATCCTCGGAGGTTACATACGTTAGCACCGATAGCATTCGGGTTACGGGGGGTGTGGAGTTCGAGGTGTATGAGAATGAGGATTTGATTCTCTGTGGGTCTTTGGAACGAATCGAGACCAACTGGATTAATGGGAGCGTTGGATTGGAGAACAATTCAAAGACAGGTTGGACTATGGAATGTTTCATGGCTGCGTCCATGTGTTCGGGTTCGTCGGCCTTTTTCCAGCCTAAACTTGGGGTATCCTCACCGGCAATTGAGGTTTATATCGCCGGTTGTTGTTCCGGTATGCCTGTGATATTGACGCAGACGATTCAGGTTAGTCCTCGGCGGAAGAACTTGAGGCAATGTGCCCTGGATGCAATTCCGGAGGATGAAGAAGTGGGAAAGGAGGAGAATACAAGTAATGGGTTGATTCGGCACCAGAAAGTGCAGATGATAGAGTCTGAAGTTGATGATTATGACCCAGATGGTAAAATGGGGCATGGTTTCTACAGTGATGATATGTACACTGGCGAAGATGGGCAGCTTTCATGGTTCAATGCAGGGGTTAGAGTGGGTGTTGGTATTGGTCTCGGTGTGTGCCTCGGGGTTGGAATCGGTGTCGGCTTGCTCATGCGTTCATACCAAACCACAACAAGACATTTTAGACGACGGTTTACGTAA MDFQERDSSMAISRTSNSYINGPSLSHSAWFEVRLFYVRISPCVIDSVPDHLNLRHLRREIGVSLEINGSQIPASDSVSIALRRDRLNKESSEVTYVSTDSIRVTGGVEFEVYENEDLILCGSLERIETNWINGSVGLENNSKTGWTMECFMAASMCSGSSAFFQPKLGVSSPAIEVYIAGCCSGMPVILTQTIQVSPRRKNLRQCALDAIPEDEEVGKEENTSNGLIRHQKVQMIESEVDDYDPDGKMGHGFYSDDMYTGEDGQLSWFNAGVRVGVGIGLGVCLGVGIGVGLLMRSYQTTTRHFRRRFT
BLAST of Cp4.1LG03g16440 vs. Swiss-Prot
Match: Y1015_ARATH (Uncharacterized protein At1g01500 OS=Arabidopsis thaliana GN=At1g01500 PE=2 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 1.1e-103 Identity = 194/294 (65.99%), Postives = 235/294 (79.93%), Query Frame = 1
BLAST of Cp4.1LG03g16440 vs. TrEMBL
Match: A0A0A0L3C9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G121610 PE=4 SV=1) HSP 1 Score: 589.7 bits (1519), Expect = 2.0e-165 Identity = 293/309 (94.82%), Postives = 299/309 (96.76%), Query Frame = 1
BLAST of Cp4.1LG03g16440 vs. TrEMBL
Match: M5X1E2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008790mg PE=4 SV=1) HSP 1 Score: 480.3 bits (1235), Expect = 1.7e-132 Identity = 236/318 (74.21%), Postives = 282/318 (88.68%), Query Frame = 1
BLAST of Cp4.1LG03g16440 vs. TrEMBL
Match: F6I648_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02240 PE=4 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 6.4e-119 Identity = 217/315 (68.89%), Postives = 265/315 (84.13%), Query Frame = 1
BLAST of Cp4.1LG03g16440 vs. TrEMBL
Match: A0A067JX71_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14337 PE=4 SV=1) HSP 1 Score: 424.1 bits (1089), Expect = 1.5e-115 Identity = 212/311 (68.17%), Postives = 259/311 (83.28%), Query Frame = 1
BLAST of Cp4.1LG03g16440 vs. TrEMBL
Match: A0A059CI94_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02322 PE=4 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 5.2e-113 Identity = 203/301 (67.44%), Postives = 247/301 (82.06%), Query Frame = 1
BLAST of Cp4.1LG03g16440 vs. TAIR10
Match: AT1G01500.1 (AT1G01500.1 Erythronate-4-phosphate dehydrogenase family protein) HSP 1 Score: 377.9 bits (969), Expect = 6.1e-105 Identity = 194/294 (65.99%), Postives = 235/294 (79.93%), Query Frame = 1
BLAST of Cp4.1LG03g16440 vs. TAIR10
Match: AT1G19400.1 (AT1G19400.1 Erythronate-4-phosphate dehydrogenase family protein) HSP 1 Score: 226.1 bits (575), Expect = 3.0e-59 Identity = 140/305 (45.90%), Postives = 187/305 (61.31%), Query Frame = 1
BLAST of Cp4.1LG03g16440 vs. TAIR10
Match: AT1G75180.1 (AT1G75180.1 Erythronate-4-phosphate dehydrogenase family protein) HSP 1 Score: 212.6 bits (540), Expect = 3.4e-55 Identity = 132/311 (42.44%), Postives = 193/311 (62.06%), Query Frame = 1
BLAST of Cp4.1LG03g16440 vs. NCBI nr
Match: gi|778677112|ref|XP_011650732.1| (PREDICTED: uncharacterized protein At1g01500 [Cucumis sativus]) HSP 1 Score: 589.7 bits (1519), Expect = 2.9e-165 Identity = 293/309 (94.82%), Postives = 299/309 (96.76%), Query Frame = 1
BLAST of Cp4.1LG03g16440 vs. NCBI nr
Match: gi|659075152|ref|XP_008437993.1| (PREDICTED: uncharacterized protein At1g01500 [Cucumis melo]) HSP 1 Score: 575.9 bits (1483), Expect = 4.4e-161 Identity = 288/309 (93.20%), Postives = 297/309 (96.12%), Query Frame = 1
BLAST of Cp4.1LG03g16440 vs. NCBI nr
Match: gi|596013150|ref|XP_007218698.1| (hypothetical protein PRUPE_ppa008790mg [Prunus persica]) HSP 1 Score: 480.3 bits (1235), Expect = 2.5e-132 Identity = 236/318 (74.21%), Postives = 282/318 (88.68%), Query Frame = 1
BLAST of Cp4.1LG03g16440 vs. NCBI nr
Match: gi|1009162835|ref|XP_015899647.1| (PREDICTED: uncharacterized protein At1g01500 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 477.6 bits (1228), Expect = 1.6e-131 Identity = 237/303 (78.22%), Postives = 273/303 (90.10%), Query Frame = 1
BLAST of Cp4.1LG03g16440 vs. NCBI nr
Match: gi|645254316|ref|XP_008232984.1| (PREDICTED: C-terminal binding protein AN [Prunus mume]) HSP 1 Score: 476.5 bits (1225), Expect = 3.6e-131 Identity = 234/316 (74.05%), Postives = 280/316 (88.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |