Cp4.1LG03g15910 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g15910
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG03 : 13572945 .. 13574353 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGTTCGAAGCTTGTAGTGGTTCACTATCATGGCGGATAGTGATGGTATGGGGTTGAATAAGCTGCAATTGACGATTAGAATTCCTATTTCACTCGGGTCCAAGCCGGTTTTCTCGAACAAAGCATCGAGTGCGCCGAACATTACAGTCTCTGCTTCGAAGCGTGCTTCGTCGAGACACAAATTCGGCGGCCGAGAAGTAATTCCTCTCGACAAGTAGGTTTCGTCGCCAAGACCGGCTCGTTTTGCTACTTTCGACATGAACTTAAGGTCATCCTCTTGAAAGCCTCCGCTCTCTACACTCATCTCCAGGAAGCTGTCCACCGACACCTTCCTCGCATCCTCTGGTTTGTGACAGGCAAACTCTACCAGATAAACCGGTGTGGATCGCTTGGAACAATAGAGGGCAAGGAGAAGTATCGAGAGACAACCGGCTACGGCCGTAGTTGCATCAATCCCATGTTGAAATCTTGTGGTGGGCAATAAGTCAGACACCCGGAAGAGTTTGAAGCCGGAAAGCTGAATGGCAATGGAAATAAACAGCGGCAAAATGACTAGAAACATAAGAGTAGTGGCAGAGTTGCATGAGTACCCGTATCCTAATTTGACATATTTGAGCTTGACTGACTGCAGAAAGTCCGGCAAGCGTTGCCGGATTCTGATGATGATGGAAGAGGAGTCCTTAAGTTCCATTTCTGCCGTTAGTCTCTCTGCATCCATCTCAATGCTATTCATATTATCTGTCTTGCTAATTTCTCTGTGATATAGTCTTAGTTTTTGTGCAGCACTCTCTGAAATCTTAGGCTTATATAGATCCAAGGAGAAGGAAGTTCAGAGAAGAAGAGGGATAGAGGCAGAAATTAATGAAGGCAAAGACTTTCACCTCTTTCAAACTACCAGCTGGTTGGGTGGTGCGAAACACAGAGAAAAAAAAAAGGGAAAGAGGTAGAGAGGCAGAGAGGGTTTGGCACTTGGCGGCACCAAGCAAGAGTAGATATATATGAATAGCAGAGAAGTGAAAGGAAGGAAGGAAGGAAGGAGGAGGTGTGGTTCTCAAATAAATGGGAGTAGTTCCAAGAACGGTGAGATAGGTCAACAACCATACACCTCTGCAGGTAAGTTGGAGAGAGACATATCTAATAAGGAACTTAATAAATGGAGAAATCATTTTCAAATTGTAGTGGTTTTGGGAGTGGTAGTTAGATATTTATTTGCATATCTTCTTAAATGACACCTCTCTCCGCAGTGCACACTCTTGTGGGTATGTAGGCAGCCTTATTTGGGTTGGAAACATCTAGCTCCACGCTAAAAGGAATTCCATCTCCGAGTCACTTCCATTCCATGTAGCTCTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTGTTTGTAGATATGAATGAATAA

mRNA sequence

ATGTCGTGGTTCACTATCATGGCGGATAGTGATGGTATGGGGTTGAATAAGCTGCAATTGACGATTAGAATTCCTATTTCACTCGGGTCCAAGCCGGTTTTCTCGAACAAAGCATCGAGTGCGCCGAACATTACAGTCTCTGCTTCGAAGCGTGCTTCGTCGAGACACAAATTCGGCGGCCGAGAAGTCATCCTCTTGAAAGCCTCCGCTCTCTACACTCATCTCCAGGAAGCTGTCCACCGACACCTTCCTCGCATCCTCTGGTTTGTGACAGGCAAACTCTACCAGATAAACCGGTGTGGATCGCTTGGAACAATAGAGGGCAAGGAGAAGTATCGAGAGACAACCGGCTACGGCCGTAGTTGCATCAATCCCATGTTGAAATCTTGTGCACTCTCTGAAATCTTAGGCTTATATAGATCCAAGGAGAAGGAAGTTCAGAGAAGAAGAGGGATAGAGGCAGAAATTAATGAAGGCAAAGACTTTCACCTCTTTCAAACTACCAGCTGGTTGGGTGGTGCGAAACACAGAGAAAAAAAAAAGGGAAAGAGAGAAGTGAAAGGAAGGAAGGAAGGAAGGAGGAGGTGTGGTTCTCAAATAAATGGGAGTAGTTCCAAGAACGGTGAGATAGGTCAACAACCATACACCTCTGCAGATATGAATGAATAA

Coding sequence (CDS)

ATGTCGTGGTTCACTATCATGGCGGATAGTGATGGTATGGGGTTGAATAAGCTGCAATTGACGATTAGAATTCCTATTTCACTCGGGTCCAAGCCGGTTTTCTCGAACAAAGCATCGAGTGCGCCGAACATTACAGTCTCTGCTTCGAAGCGTGCTTCGTCGAGACACAAATTCGGCGGCCGAGAAGTCATCCTCTTGAAAGCCTCCGCTCTCTACACTCATCTCCAGGAAGCTGTCCACCGACACCTTCCTCGCATCCTCTGGTTTGTGACAGGCAAACTCTACCAGATAAACCGGTGTGGATCGCTTGGAACAATAGAGGGCAAGGAGAAGTATCGAGAGACAACCGGCTACGGCCGTAGTTGCATCAATCCCATGTTGAAATCTTGTGCACTCTCTGAAATCTTAGGCTTATATAGATCCAAGGAGAAGGAAGTTCAGAGAAGAAGAGGGATAGAGGCAGAAATTAATGAAGGCAAAGACTTTCACCTCTTTCAAACTACCAGCTGGTTGGGTGGTGCGAAACACAGAGAAAAAAAAAAGGGAAAGAGAGAAGTGAAAGGAAGGAAGGAAGGAAGGAGGAGGTGTGGTTCTCAAATAAATGGGAGTAGTTCCAAGAACGGTGAGATAGGTCAACAACCATACACCTCTGCAGATATGAATGAATAA

Protein sequence

MSWFTIMADSDGMGLNKLQLTIRIPISLGSKPVFSNKASSAPNITVSASKRASSRHKFGGREVILLKASALYTHLQEAVHRHLPRILWFVTGKLYQINRCGSLGTIEGKEKYRETTGYGRSCINPMLKSCALSEILGLYRSKEKEVQRRRGIEAEINEGKDFHLFQTTSWLGGAKHREKKKGKREVKGRKEGRRRCGSQINGSSSKNGEIGQQPYTSADMNE
Homology
[Close]
BLAST of Cp4.1LG03g15910 vs. TrEMBL
Match: A0A022RYN3_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015965mg PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-06
Identity = 35/56 (62.50%), Postives = 40/56 (71.43%), Query Frame = 1 

Query: 5   TIMADSDGMGLNKLQLTIRIPISLGSKPVFSNKASSAPNITVSASKRASSRHKFGG 61
           TIMA+S+G+GLNKLQLT R+PI  G   V  NK SSAPNIT SAS RA+     GG
Sbjct: 76  TIMAESEGVGLNKLQLTTRMPICFGLTFVLRNKLSSAPNITCSASSRAACIDGRGG 131

[Close]
BLAST of Cp4.1LG03g15910 vs. TrEMBL
Match: A0A0A9IE13_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-06
Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 1 

Query: 7  MADSDGMGLNKLQLTIRIPISLGSKPVFSNKASSAPNITVSASKRASSRHKFGG 61
          MADSDG+GL +LQLT R P+SLG  PV ++ +S+APN+T  AS RA+S    GG
Sbjct: 1  MADSDGVGLKRLQLTTRTPMSLGFTPVLASSSSTAPNMTSRASSRAASMDGLGG 54

[Close]
BLAST of Cp4.1LG03g15910 vs. NCBI nr
Match: gi|604346789|gb|EYU45169.1| (hypothetical protein MIMGU_mgv1a015965mg [Erythranthe guttata])

HSP 1 Score: 62.0 bits (149), Expect = 1.5e-06
Identity = 35/56 (62.50%), Postives = 40/56 (71.43%), Query Frame = 1 

Query: 5   TIMADSDGMGLNKLQLTIRIPISLGSKPVFSNKASSAPNITVSASKRASSRHKFGG 61
           TIMA+S+G+GLNKLQLT R+PI  G   V  NK SSAPNIT SAS RA+     GG
Sbjct: 76  TIMAESEGVGLNKLQLTTRMPICFGLTFVLRNKLSSAPNITCSASSRAACIDGRGG 131

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g15910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG03g15910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A022RYN3_ERYGU1.1e-0662.50Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015965mg PE=4 SV=1[more]
A0A0A9IE13_ARUDO1.8e-0657.41Uncharacterized protein OS=Arundo donax PE=4 SV=1[more]
BLAST of Cp4.1LG03g15910 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG03g15910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|604346789|gb|EYU45169.1|1.5e-0662.50hypothetical protein MIMGU_mgv1a015965mg [Erythranthe guttata][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g15910.1Cp4.1LG03g15910.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g15910Cp4.1LG08g00610Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g15910Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g15910Cucumber (Chinese Long) v3cpecucB0774
Cp4.1LG03g15910Wax gourdcpewgoB0761
Cp4.1LG03g15910Wax gourdcpewgoB0770
Cp4.1LG03g15910Cucurbita pepo (Zucchini)cpecpeB217
Cp4.1LG03g15910Cucurbita pepo (Zucchini)cpecpeB479
Cp4.1LG03g15910Cucumber (Gy14) v1cgycpeB0574
Cp4.1LG03g15910Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g15910Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g15910Cucurbita maxima (Rimu)cmacpeB834
Cp4.1LG03g15910Cucurbita maxima (Rimu)cmacpeB839
Cp4.1LG03g15910Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g15910Cucurbita moschata (Rifu)cmocpeB589
Cp4.1LG03g15910Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g15910Wild cucumber (PI 183967)cpecpiB611
Cp4.1LG03g15910Wild cucumber (PI 183967)cpecpiB624
Cp4.1LG03g15910Cucumber (Chinese Long) v2cpecuB609
Cp4.1LG03g15910Cucumber (Chinese Long) v2cpecuB622
Cp4.1LG03g15910Bottle gourd (USVL1VR-Ls)cpelsiB506
Cp4.1LG03g15910Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g15910Watermelon (97103) v1cpewmB613
Cp4.1LG03g15910Melon (DHL92) v3.5.1cpemeB585
Cp4.1LG03g15910Cucumber (Gy14) v2cgybcpeB406
Cp4.1LG03g15910Melon (DHL92) v3.6.1cpemedB651
Cp4.1LG03g15910Melon (DHL92) v3.6.1cpemedB693
Cp4.1LG03g15910Silver-seed gourdcarcpeB0192
Cp4.1LG03g15910Silver-seed gourdcarcpeB1379