Cp4.1LG03g15520 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g15520
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCONSTANS
LocationCp4.1LG03 : 7378010 .. 7379842 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTACGGCGGCAATGGGTGGGGGTCTATAATATGCGAGGCATGCGAGACAGCCCCCGCCCAATTCATCTGCAAAGCCGACGCCGCCTCGCTGTGTGCGGCGTGCGACGCGGAGATCCACTCGGCTAACCCACTGGCTCGACGGCACCAGCGCGTGGCGATCAGCAGGGGCGCCATGTTTCCTACGGCGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGTATATCAACACATCCTATGGTCTCCACCACTAGGTTACACCGTGAGAATCCCATGTTCTGTCTGCATGTTACCCTAGAGCAACTACCCATTGGGAGGGTCGTAACATGGGAGATGGAACAACGCAAACTCCAAAAATAGATAGAATTTCTTAGGTCCATTCCCAACTTTGGCTTTTTTATTCGATAGCATTGTTGGTGTCGACCTCTGAGGTCTGAAAATGGCGGGTCACACTTACGAAAAATTATTAAGAGTTAGTATATTCTTGACCAAAGTAGCAATAACTAAAACACTATAGGAATAAAGAGTTGTTCTAGGATTAGTGTTCCAGTCAAGAATGTCTTGGTTTNGGAGGAGCAGGAGGAGGCGGCTTCTTGGCTGCTGATGAATCCAGTGAAGAACAATAGCGGCGGAAGCAACAAGAACAACAGCAATAATGGGCTGTTTTTGTTTGGTGGGGAAGATGAGGAGGCGGAGGAGGAGGAGTACTTGAACTTTGTGGAGTTCAATGGGAATAATAATGGATTCGGCAATGGGGATGAGGAGTTTGAGGGATTGAAGAACAACTATGGCGGCGGAGGAGACAGTGTTGTGCCGATTGAGTTCGAAGGGAATAAGGATGATCGGATATTGTTGCAACAGAGCTACGGAGGCGTTGTTGATGCCTCTGAATTCTTTCACTCTGCTTCCAAACCTTCCTACTCCTATAATGCCTTCCTCACCCACGCGGTAAAACCCTCTTTCACCTCTCTTTTACCTTCACAATTACCCAAAAAAACGAAACTAAAATACTATTACTATTCTATTAACAAATATTAATATATTTTATTGGAATGATTACTTGTAATATATTAAGTATATTTATTTTTACTCCTTTGATTTAATTATTTTATTATTTTATTATTTTTTAAACTTAATACCTTATCAAATGAGAATTAGTTTACCATTGAATTAAAATCATTAAAATTCTCTGTATTTGTGCAACAATATCAGATATCAGTGTCATCAATGGAGGTCGGGGTGGTACCGGAGTCAACAACGGCGGCCACCGTCAGCGACATATCAATCTCTAACATGAGGCCACCAAGAGGGACAATAGATCTTTTCTCCGGCACGACGGCGGCGTCGGCGGCGGCGGCGGTGGTTCAATTGCCGGCGACCCAATTGAGTCCAATGGACAGAGAAGCCCGAGTTCTACGGTACAGAGAGAAGAAGAAGACAAGAAAGTTCGAGAAGACCATCAGATACGCGTCCAGAAAGGCCTATGCGGAGACCCGGCCTAGAATAAAGGGCCGGTTCGCCAAACGAACCGATGTTGAGGTCGAACTGGACCGGAAATTCTCCAACCCGTTGACGGTGGATGGTGGGTATGGGATTGTGCCTTTCTTTTGAAGGTGATGAAGGTGATGAAGAAGATGGAAGAATAGGTACGGATTGTTGTTGTTGGTGAAATTAGTAAGTAGTAATTATAGGTGAATTTTAATTTGACGGTTTAATTATAACATTTGGGTTAAATGTATATGAATTTTGTATTATCTCTAACTACGTTTCATAATTCAGATATAGTATTTTCAGTGTCGGTTTAAAACTCATTTTACTTGAAAAAATTCAA

mRNA sequence

AACTACGGCGGCAATGGGTGGGGGTCTATAATATGCGAGGCATGCGAGACAGCCCCCGCCCAATTCATCTGCAAAGCCGACGCCGCCTCGCTGTGTGCGGCGTGCGACGCGGAGATCCACTCGGCTAACCCACTGGCTCGACGGCACCAGCGCGAGGCGGAGGAGGAGGAGTACTTGAACTTTGTGGAGTTCAATGGGAATAATAATGGATTCGGCAATGGGGATGAGGAGTTTGAGGGATTGAAGAACAACTATGGCGGCGGAGGAGACAGTGTTGTGCCGATTGAGTTCGAAGGGAATAAGGATGATCGGATATTGTTGCAACAGAGCTACGGAGGCGTTGTTGATGCCTCTGAATTCTTTCACTCTGCTTCCAAACCTTCCTACTCCTATAATGCCTTCCTCACCCACGCGATATCAGTGTCATCAATGGAGGTCGGGGTGGTACCGGAGTCAACAACGGCGGCCACCGTCAGCGACATATCAATCTCTAACATGAGGCCACCAAGAGGGACAATAGATCTTTTCTCCGGCACGACGGCGGCGTCGGCGGCGGCGGCGGTGGTTCAATTGCCGGCGACCCAATTGAGTCCAATGGACAGAGAAGCCCGAGTTCTACGGTACAGAGAGAAGAAGAAGACAAGAAAGTTCGAGAAGACCATCAGATACGCGTCCAGAAAGGCCTATGCGGAGACCCGGCCTAGAATAAAGGGCCGGTTCGCCAAACGAACCGATGTTGAGGTCGAACTGGACCGGAAATTCTCCAACCCGTTGACGGTGGATGGTGGGTATGGGATTGTGCCTTTCTTTTGAAGGTGATGAAGGTGATGAAGAAGATGGAAGAATAGGTACGGATTGTTGTTGTTGGTGAAATTAGTAAGTAGTAATTATAGGTGAATTTTAATTTGACGGTTTAATTATAACATTTGGGTTAAATGTATATGAATTTTGTATTATCTCTAACTACGTTTCATAATTCAGATATAGTATTTTCAGTGTCGGTTTAAAACTCATTTTACTTGAAAAAATTCAA

Coding sequence (CDS)

AACTACGGCGGCAATGGGTGGGGGTCTATAATATGCGAGGCATGCGAGACAGCCCCCGCCCAATTCATCTGCAAAGCCGACGCCGCCTCGCTGTGTGCGGCGTGCGACGCGGAGATCCACTCGGCTAACCCACTGGCTCGACGGCACCAGCGCGAGGCGGAGGAGGAGGAGTACTTGAACTTTGTGGAGTTCAATGGGAATAATAATGGATTCGGCAATGGGGATGAGGAGTTTGAGGGATTGAAGAACAACTATGGCGGCGGAGGAGACAGTGTTGTGCCGATTGAGTTCGAAGGGAATAAGGATGATCGGATATTGTTGCAACAGAGCTACGGAGGCGTTGTTGATGCCTCTGAATTCTTTCACTCTGCTTCCAAACCTTCCTACTCCTATAATGCCTTCCTCACCCACGCGATATCAGTGTCATCAATGGAGGTCGGGGTGGTACCGGAGTCAACAACGGCGGCCACCGTCAGCGACATATCAATCTCTAACATGAGGCCACCAAGAGGGACAATAGATCTTTTCTCCGGCACGACGGCGGCGTCGGCGGCGGCGGCGGTGGTTCAATTGCCGGCGACCCAATTGAGTCCAATGGACAGAGAAGCCCGAGTTCTACGGTACAGAGAGAAGAAGAAGACAAGAAAGTTCGAGAAGACCATCAGATACGCGTCCAGAAAGGCCTATGCGGAGACCCGGCCTAGAATAAAGGGCCGGTTCGCCAAACGAACCGATGTTGAGGTCGAACTGGACCGGAAATTCTCCAACCCGTTGACGGTGGATGGTGGGTATGGGATTGTGCCTTTCTTTTGA

Protein sequence

NYGGNGWGSIICEACETAPAQFICKADAASLCAACDAEIHSANPLARRHQREAEEEEYLNFVEFNGNNNGFGNGDEEFEGLKNNYGGGGDSVVPIEFEGNKDDRILLQQSYGGVVDASEFFHSASKPSYSYNAFLTHAISVSSMEVGVVPESTTAATVSDISISNMRPPRGTIDLFSGTTAASAAAAVVQLPATQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVELDRKFSNPLTVDGGYGIVPFF
Homology
[Close]
BLAST of Cp4.1LG03g15520 vs. Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 6.9e-38
Identity = 128/328 (39.02%), Postives = 158/328 (48.17%), Query Frame = 1 

Query: 11  ICEACETAPAQFICKADAASLCA------------------------------------A 70
           +C++CE APA F CKADAASLC                                     +
Sbjct: 54  VCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHS 113

Query: 71  CDAEIHSANPLARRHQREAEEEE-------YLNFVEFNGNNNGFGNGDE----------- 130
           C+  +          Q E +E+E         N  + +GNNNGF  GDE           
Sbjct: 114 CETTVTDPENRLVLGQEEEDEDEAEAASWLLPNSGKNSGNNNGFSIGDEFLNLVDYSSSD 173

Query: 131 -EFEGLKNNY---------GGGGDSVVPIEFEGNKDDRILLQQSYGGVVDASEFFHSASK 190
            +F    N Y           G D VVP++ E +K          G   +   F  S + 
Sbjct: 174 KQFTDQSNQYQLDCNVPQRSYGEDGVVPLQIEVSK----------GMYQEQQNFQLSINC 233

Query: 191 PSY----SYNAFLTHAISVSSMEVGVVPESTTAATVSDISISNMRPPRGTIDLFSGTTAA 250
            S+    S N  L+H ++VSSM++GVVPESTT    SD ++SN R P+   D        
Sbjct: 234 GSWGALRSSNGSLSHMVNVSSMDLGVVPESTT----SDATVSNPRSPKAVTD-------- 293

Query: 251 SAAAAVVQLPATQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAK 271
                    PA  LSP DREARVLRYREKKK RKFEKTIRYASRKAYAE RPRIKGRFAK
Sbjct: 294 ----QPPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAK 353

[Close]
BLAST of Cp4.1LG03g15520 vs. Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.2e-35
Identity = 119/307 (38.76%), Postives = 160/307 (52.12%), Query Frame = 1 

Query: 11  ICEACETAPAQFICKADAASLCAACDAEIHSANPLARRHQR------------------- 70
           +C++CE+APA F+CKADAASLC ACDAEIHSANPLARRHQR                   
Sbjct: 58  VCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMAPSET 117

Query: 71  ----EAEEEEYLNFV------EFNGNNNGFGNGDEEFEGLKNNYGGGGDSVVPIEFEGNK 130
               + ++ E  +++           NNGF  G E  + +  +Y    D+    +FE N+
Sbjct: 118 DADNDEDDREVASWLLPNPGKNIGNQNNGFLFGVEYLDLV--DYSSSMDN----QFEDNQ 177

Query: 131 DDRILLQQSYGGVVDASEFFHSASKPSYSYNAFLTHAISVSSMEVGVVPESTTAATVSDI 190
                 Q+S+GG  D           S+          S  + ++G+    ++ A  ++ 
Sbjct: 178 YTH--YQRSFGG--DGVVPLQVEESTSHLQQ-------SQQNFQLGINYGFSSGAHYNNN 237

Query: 191 SISNMRPPRGTIDL-FSGTTAASAAAAVVQLPAT-----------------QLSPMDREA 250
           S+ ++        +  S    ++A+   VQ P T                 QL+PM+REA
Sbjct: 238 SLKDLNHSASVSSMDISVVPESTASDITVQHPRTTKETIDQLSGPPTQVVQQLTPMEREA 297

Query: 251 RVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVELDRKFSNPLTVDGG 271
           RVLRYREKKKTRKF+KTIRYASRKAYAE RPRIKGRFAKR + E E +  FS  L  + G
Sbjct: 298 RVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSLMSETG 347

[Close]
BLAST of Cp4.1LG03g15520 vs. Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 9.4e-35
Identity = 115/288 (39.93%), Postives = 144/288 (50.00%), Query Frame = 1 

Query: 11  ICEACETAPAQFICKADAASLCAACDAEIHSANPLARRHQREAEEEEY------------ 70
           +CE CE APA   CKADAA+LC  CD +IHSANPL+RRH+R      Y            
Sbjct: 50  LCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSS 109

Query: 71  LNFVEFNGNN---------------NGFGNGD-EEFEGLKNNYGGGGDSVVPIEFEGNKD 130
           +NFV+ +G +               N F + D  + E        G D VVP++      
Sbjct: 110 VNFVDEDGGDVTASWLLAKEGIEITNLFSDLDYPKIEVTSEENSSGNDGVVPVQ------ 169

Query: 131 DRILLQQSYGGVVDASEFFHSASKPSYSYNAFLTHAISVSSMEVGVVPESTTAATVSDIS 190
           +++ L + Y        F  SASK S     F+   +S  +++V +VPES          
Sbjct: 170 NKLFLNEDY------FNFDLSASKISQQGFNFINQTVSTRTIDVPLVPES---------- 229

Query: 191 ISNMRPPRGTIDLFSGTTAASAAAAVVQLPATQLSPMDREARVLRYREKKKTRKFEKTIR 250
                          G TA        + PA QLSP +REARVLRYREK+K RKFEKTIR
Sbjct: 230 --------------GGVTAEMTNT---ETPAVQLSPAEREARVLRYREKRKNRKFEKTIR 289

Query: 251 YASRKAYAETRPRIKGRFAKRTDVEVELDRKFSNPLTVDGGYGIVPFF 271
           YASRKAYAE RPRIKGRFAKRTD            + V GG+G+VP F
Sbjct: 290 YASRKAYAEMRPRIKGRFAKRTDSR----ENDGGDVGVYGGFGVVPSF 294

[Close]
BLAST of Cp4.1LG03g15520 vs. Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.7e-31
Identity = 95/220 (43.18%), Postives = 130/220 (59.09%), Query Frame = 1 

Query: 56  EEYLNFVEFNGN-----NNGFGNGDEEFEGLKNNYGGGGDSVVPIEFEGNKDDRILLQQS 115
           +EYLN V++N +        +    +     + +YGG  D VVP++ E ++  +   QQ+
Sbjct: 174 DEYLNLVDYNSSMDYKFTGEYSQHQQNCSVPQTSYGG--DRVVPLKLEESRGHQCHNQQN 233

Query: 116 YGGVVDASEFFHSASKPSYSYNAFLTHAISVSSMEVGVVPESTTAATVSDISISNMRPPR 175
           +   +      + +S   Y+ N  + H   +SSME GVVPEST   T +    S+ R P+
Sbjct: 234 FQFNIK-----YGSSGTHYNDNGSINHNAYISSMETGVVPESTACVTTA----SHPRTPK 293

Query: 176 GTIDLFSGTTAASAAAAVVQLPATQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYA 235
           GT++            A   +  TQLSPMDREARVLRYREK+KTRKFEKTIRYASRKAYA
Sbjct: 294 GTVE-------QQPDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYA 353

Query: 236 ETRPRIKGRFAKRTDVEVELDRKFSNPLTVDGGYGIVPFF 271
           E RPR+ GRFAKR ++E E ++ F+  L  + GYGIVP F
Sbjct: 354 EIRPRVNGRFAKR-EIEAE-EQGFNTMLMYNTGYGIVPSF 373

[Close]
BLAST of Cp4.1LG03g15520 vs. Swiss-Prot
Match: HD1_ORYSJ (Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.2e-31
Identity = 89/183 (48.63%), Postives = 115/183 (62.84%), Query Frame = 1 

Query: 88  GGDSVVPIEFEGNKDDRILLQQSYGGVVDASEFFHSASKPSYSYNAFLTHAISVSSMEVG 147
           G + VVP +     +     Q S  GVV A +     +  S +Y   ++++IS SSME G
Sbjct: 231 GSECVVPSQITMLSEQ----QHSGYGVVGADQAASMTAGVS-AYTDSISNSISFSSMEAG 290

Query: 148 VVPESTTAATVSDISISNMRPPRGTIDLFSGTTAASAAAAVVQLPATQLSPMDREARVLR 207
           +VP+S    TV D+  S +  P G I+LFSG +        +Q+ +   S MDREARVLR
Sbjct: 291 IVPDS----TVIDMPNSRILTPAGAINLFSGPS--------LQM-SLHFSSMDREARVLR 350

Query: 208 YREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVELDRKFSNPLTVDGGYGIV 267
           YREKKK RKFEKTIRY +RKAYAE RPRIKGRFAKR+DV++E+D+ FS     DG YG V
Sbjct: 351 YREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRSDVQIEVDQMFSTAALSDGSYGTV 395

Query: 268 PFF 271
           P+F
Sbjct: 411 PWF 395

[Close]
BLAST of Cp4.1LG03g15520 vs. TrEMBL
Match: A0A0A0KY36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G124910 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.7e-91
Identity = 211/335 (62.99%), Postives = 233/335 (69.55%), Query Frame = 1 

Query: 3   GGNGWGSIICEACETAPAQFICKADAASLCAACDAEIHSANPLARRHQR----------- 62
           GGNGWG++ICEACE  PA+FICKADAASLCAACDAEIHSANPLARRHQR           
Sbjct: 12  GGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPISRGGAMFR 71

Query: 63  ---EAEEEEYLNFV------------EFNGNNNGF----GNGDEEFEGLK-NNYGGGG-- 122
              E +EEE  +++              N NNNG     G  +E+ E LK   + G    
Sbjct: 72  SVEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYLKFVEFNGNNEE 131

Query: 123 -----------------DSVVPI-EFEGNK----------------DDRILLQQSYGGVV 182
                            DSVVPI +FEGNK                +  ILL+QSYGG+V
Sbjct: 132 DDDEFETLKNNNYGGGGDSVVPIDQFEGNKNHDHHLHHHHHEQQQQNHEILLEQSYGGLV 191

Query: 183 DASEFFHSASKPSYSYNAFLTHAISVSSMEVGVVPESTTAATVSDISISNMRPPRGTIDL 242
           DASEFFH++SKPS+SYN FLTHAISVSSMEVGVVPES TA  +SDISISNMRPP+GTIDL
Sbjct: 192 DASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPES-TATIMSDISISNMRPPKGTIDL 251

Query: 243 FSGTTAASAAAAVVQLPATQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPR 271
           FSG  AA  AAA  Q+PA QLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPR
Sbjct: 252 FSGMIAAEPAAA-SQMPAAQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPR 311

[Close]
BLAST of Cp4.1LG03g15520 vs. TrEMBL
Match: A0A067EUU9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017819mg PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 7.4e-63
Identity = 163/323 (50.46%), Postives = 196/323 (60.68%), Query Frame = 1 

Query: 11  ICEACETAPAQFICKADAASLCAACDAEIHSANPLARRHQR------------------- 70
           +CE+CE APA F+CKADAASLCAACDAEIHSANPLARRHQR                   
Sbjct: 62  VCESCEQAPAAFLCKADAASLCAACDAEIHSANPLARRHQRVPILPISGSVYGGRTGATP 121

Query: 71  ------EAEEEEYLNFVEF-----------NGNNNGF----------------------- 130
                 + +EEE  +++             NGNNNGF                       
Sbjct: 122 EGHHEDDQDEEEAASWLLLSNPGKNCGNGNNGNNNGFLFGGEVDEYLDLVDYTGGNQYLD 181

Query: 131 ----GNGDEEFEGLKNNYGGGGDSVVPIEFEGNKDDRILLQQSYGGVVDASEFFHSASKP 190
               GN +++  G+    G  GDSVVP++ E    D    QQ++   +D     + +SK 
Sbjct: 182 QYSNGNNNQQQHGVAQK-GYVGDSVVPVQCELANKDHHRHQQNFQLGLD-----YDSSKA 241

Query: 191 SYSYNAFLTHAISVSSMEVGVVPESTTAATVSDISISNMRPPRGTIDLFSGTTAASAAAA 250
            YSYN  ++H++SVSS ++GVVPES    T+SDISIS+ RPP+GTIDLFSG         
Sbjct: 242 GYSYNGSISHSVSVSSTDLGVVPES----TMSDISISHSRPPKGTIDLFSGPP------- 301

Query: 251 VVQLPATQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVE 271
            +Q+P  QL+PMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD E
Sbjct: 302 -IQMP-PQLTPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDAE 361

[Close]
BLAST of Cp4.1LG03g15520 vs. TrEMBL
Match: V4STR5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012022mg PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 7.4e-63
Identity = 163/323 (50.46%), Postives = 196/323 (60.68%), Query Frame = 1 

Query: 11  ICEACETAPAQFICKADAASLCAACDAEIHSANPLARRHQR------------------- 70
           +CE+CE APA F+CKADAASLCAACDAEIHSANPLARRHQR                   
Sbjct: 62  VCESCEQAPAAFLCKADAASLCAACDAEIHSANPLARRHQRVPILPISGSVYGGRTGATP 121

Query: 71  ------EAEEEEYLNFVEF-----------NGNNNGF----------------------- 130
                 + +EEE  +++             NGNNNGF                       
Sbjct: 122 EGHHEDDQDEEEAASWLLLSNPGKNCGNGNNGNNNGFLFGGEVDEYLDLVDYTGGNQYLD 181

Query: 131 ----GNGDEEFEGLKNNYGGGGDSVVPIEFEGNKDDRILLQQSYGGVVDASEFFHSASKP 190
               GN +++  G+    G  GDSVVP++ E    D    QQ++   +D     + +SK 
Sbjct: 182 QYSTGNNNQQQHGVAQK-GYVGDSVVPVQCELANKDHHRHQQNFQLGLD-----YDSSKA 241

Query: 191 SYSYNAFLTHAISVSSMEVGVVPESTTAATVSDISISNMRPPRGTIDLFSGTTAASAAAA 250
            YSYN  ++H++SVSS ++GVVPES    T+SDISIS+ RPP+GTIDLFSG         
Sbjct: 242 GYSYNGSISHSVSVSSTDLGVVPES----TMSDISISHSRPPKGTIDLFSGPP------- 301

Query: 251 VVQLPATQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVE 271
            +Q+P  QL+PMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD E
Sbjct: 302 -IQMP-PQLTPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDAE 361

[Close]
BLAST of Cp4.1LG03g15520 vs. TrEMBL
Match: A0A0K9RWH4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_021810 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.8e-62
Identity = 155/294 (52.72%), Postives = 188/294 (63.95%), Query Frame = 1 

Query: 11  ICEACETAPAQFICKADAASLCAACDAEIHSANPLARRHQR------------------- 70
           +CEACE APA F+CKADAASLCA CDA+IHSANPLARRH R                   
Sbjct: 59  VCEACERAPAAFLCKADAASLCATCDADIHSANPLARRHHRVPIMPVGCVYGPSDGFLEL 118

Query: 71  ----------EAEEEEYLNFVEFN-GNNNGFG----NGDEEFEGLKNNYGGGGDSVVPIE 130
                     E +E+E  +++  N G +N F     N  +EF   + N G   DSVVP++
Sbjct: 119 PDGDDQTTDHEGDEDEAASWLLLNPGADNQFCEPSYNQQQEFSVPEKNCGD--DSVVPVQ 178

Query: 131 FEGNKDDRILLQQSYGGVVDASEFFHSASKPSYSYNAFLTHAISVSSMEVGVVPESTTAA 190
               KD +I  Q    G+          +KP Y+YN  ++H++SVSS++VGVVPEST   
Sbjct: 179 CREPKDHQIQYQNFLFGM-------ECETKPEYNYNTSISHSVSVSSLDVGVVPEST--- 238

Query: 191 TVSDISISNMRPPRGTIDLFSGTTAASAAAAVVQLPATQLSPMDREARVLRYREKKKTRK 250
            +SD+S+S+ R P+GTIDLFS            Q+P TQLSPMDREARV+RYREKKK RK
Sbjct: 239 -MSDMSVSHPRTPKGTIDLFSSPPT--------QVP-TQLSPMDREARVMRYREKKKNRK 298

Query: 251 FEKTIRYASRKAYAETRPRIKGRFAKRTDVEVELDRKFSNPLTVDGGYGIVPFF 271
           FEKTIRYASRKAYAETRPRIKGRFAKRTDVE E+D+ F+N L  DGGYGIVP F
Sbjct: 299 FEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEMDQMFTNSLMADGGYGIVPSF 330

[Close]
BLAST of Cp4.1LG03g15520 vs. TrEMBL
Match: B4YA14_OXYRB (CONSTANS-like protein 2 OS=Oxybasis rubra GN=COL2 PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.6e-60
Identity = 152/297 (51.18%), Postives = 186/297 (62.63%), Query Frame = 1 

Query: 11  ICEACETAPAQFICKADAASLCAACDAEIHSANPLARRHQR---------------EAEE 70
           +CEACE  PA F+CKADAASLCA CDA+IHSANPLARRH R                  E
Sbjct: 60  VCEACEREPAAFLCKADAASLCATCDADIHSANPLARRHHRVPIMPVGCVYGPSDGRMSE 119

Query: 71  EEYLNFVEFNGNNNGF-GNGDEEFEGLKNNYGG---------------------GGDSVV 130
           E +L+  + +       G+ DE    L  N G                      GGDSVV
Sbjct: 120 EGFLDLPDGDDQTTDHEGDEDEAASWLLLNPGADNQFCEQYSQQQEFSVPEKNCGGDSVV 179

Query: 131 PIEFEGNKDDRILLQQSYGGVVDASEFFHSASKPSYSYNAFLTHAISVSSMEVGVVPEST 190
           P++    KD +I  Q+   G+          +K  Y+YN  ++H++SVSS++VGVVPES 
Sbjct: 180 PVQCREVKDHQIQYQKFLFGM-------ECETKSEYNYNTSISHSVSVSSLDVGVVPES- 239

Query: 191 TAATVSDISISNMRPPRGTIDLFSGTTAASAAAAVVQLPATQLSPMDREARVLRYREKKK 250
              T+SD+S+S+ RPP+GTIDLFS        +  +Q+P TQLSP+DREARV+RYREKKK
Sbjct: 240 ---TMSDMSVSHSRPPKGTIDLFS--------SPPMQVP-TQLSPLDREARVMRYREKKK 299

Query: 251 TRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVELDRKFSNPLTVDGGYGIVPFF 271
            RKFEKTIRYASRKAYAETRPRIKGRFAKRTDVE E+D+ F+N L  DGGYGIVP F
Sbjct: 300 NRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEMDQMFTNSLMSDGGYGIVPSF 336

[Close]
BLAST of Cp4.1LG03g15520 vs. TAIR10
Match: AT5G15850.1 (AT5G15850.1 CONSTANS-like 1)

HSP 1 Score: 159.1 bits (401), Expect = 3.9e-39
Identity = 128/328 (39.02%), Postives = 158/328 (48.17%), Query Frame = 1 

Query: 11  ICEACETAPAQFICKADAASLCA------------------------------------A 70
           +C++CE APA F CKADAASLC                                     +
Sbjct: 54  VCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHS 113

Query: 71  CDAEIHSANPLARRHQREAEEEE-------YLNFVEFNGNNNGFGNGDE----------- 130
           C+  +          Q E +E+E         N  + +GNNNGF  GDE           
Sbjct: 114 CETTVTDPENRLVLGQEEEDEDEAEAASWLLPNSGKNSGNNNGFSIGDEFLNLVDYSSSD 173

Query: 131 -EFEGLKNNY---------GGGGDSVVPIEFEGNKDDRILLQQSYGGVVDASEFFHSASK 190
            +F    N Y           G D VVP++ E +K          G   +   F  S + 
Sbjct: 174 KQFTDQSNQYQLDCNVPQRSYGEDGVVPLQIEVSK----------GMYQEQQNFQLSINC 233

Query: 191 PSY----SYNAFLTHAISVSSMEVGVVPESTTAATVSDISISNMRPPRGTIDLFSGTTAA 250
            S+    S N  L+H ++VSSM++GVVPESTT    SD ++SN R P+   D        
Sbjct: 234 GSWGALRSSNGSLSHMVNVSSMDLGVVPESTT----SDATVSNPRSPKAVTD-------- 293

Query: 251 SAAAAVVQLPATQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAK 271
                    PA  LSP DREARVLRYREKKK RKFEKTIRYASRKAYAE RPRIKGRFAK
Sbjct: 294 ----QPPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAK 353

[Close]
BLAST of Cp4.1LG03g15520 vs. TAIR10
Match: AT3G02380.1 (AT3G02380.1 CONSTANS-like 2)

HSP 1 Score: 149.8 bits (377), Expect = 2.4e-36
Identity = 119/307 (38.76%), Postives = 160/307 (52.12%), Query Frame = 1 

Query: 11  ICEACETAPAQFICKADAASLCAACDAEIHSANPLARRHQR------------------- 70
           +C++CE+APA F+CKADAASLC ACDAEIHSANPLARRHQR                   
Sbjct: 58  VCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMAPSET 117

Query: 71  ----EAEEEEYLNFV------EFNGNNNGFGNGDEEFEGLKNNYGGGGDSVVPIEFEGNK 130
               + ++ E  +++           NNGF  G E  + +  +Y    D+    +FE N+
Sbjct: 118 DADNDEDDREVASWLLPNPGKNIGNQNNGFLFGVEYLDLV--DYSSSMDN----QFEDNQ 177

Query: 131 DDRILLQQSYGGVVDASEFFHSASKPSYSYNAFLTHAISVSSMEVGVVPESTTAATVSDI 190
                 Q+S+GG  D           S+          S  + ++G+    ++ A  ++ 
Sbjct: 178 YTH--YQRSFGG--DGVVPLQVEESTSHLQQ-------SQQNFQLGINYGFSSGAHYNNN 237

Query: 191 SISNMRPPRGTIDL-FSGTTAASAAAAVVQLPAT-----------------QLSPMDREA 250
           S+ ++        +  S    ++A+   VQ P T                 QL+PM+REA
Sbjct: 238 SLKDLNHSASVSSMDISVVPESTASDITVQHPRTTKETIDQLSGPPTQVVQQLTPMEREA 297

Query: 251 RVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVELDRKFSNPLTVDGG 271
           RVLRYREKKKTRKF+KTIRYASRKAYAE RPRIKGRFAKR + E E +  FS  L  + G
Sbjct: 298 RVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSLMSETG 347

[Close]
BLAST of Cp4.1LG03g15520 vs. TAIR10
Match: AT2G24790.1 (AT2G24790.1 CONSTANS-like 3)

HSP 1 Score: 148.7 bits (374), Expect = 5.3e-36
Identity = 115/288 (39.93%), Postives = 144/288 (50.00%), Query Frame = 1 

Query: 11  ICEACETAPAQFICKADAASLCAACDAEIHSANPLARRHQREAEEEEY------------ 70
           +CE CE APA   CKADAA+LC  CD +IHSANPL+RRH+R      Y            
Sbjct: 50  LCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSS 109

Query: 71  LNFVEFNGNN---------------NGFGNGD-EEFEGLKNNYGGGGDSVVPIEFEGNKD 130
           +NFV+ +G +               N F + D  + E        G D VVP++      
Sbjct: 110 VNFVDEDGGDVTASWLLAKEGIEITNLFSDLDYPKIEVTSEENSSGNDGVVPVQ------ 169

Query: 131 DRILLQQSYGGVVDASEFFHSASKPSYSYNAFLTHAISVSSMEVGVVPESTTAATVSDIS 190
           +++ L + Y        F  SASK S     F+   +S  +++V +VPES          
Sbjct: 170 NKLFLNEDY------FNFDLSASKISQQGFNFINQTVSTRTIDVPLVPES---------- 229

Query: 191 ISNMRPPRGTIDLFSGTTAASAAAAVVQLPATQLSPMDREARVLRYREKKKTRKFEKTIR 250
                          G TA        + PA QLSP +REARVLRYREK+K RKFEKTIR
Sbjct: 230 --------------GGVTAEMTNT---ETPAVQLSPAEREARVLRYREKRKNRKFEKTIR 289

Query: 251 YASRKAYAETRPRIKGRFAKRTDVEVELDRKFSNPLTVDGGYGIVPFF 271
           YASRKAYAE RPRIKGRFAKRTD            + V GG+G+VP F
Sbjct: 290 YASRKAYAEMRPRIKGRFAKRTDSR----ENDGGDVGVYGGFGVVPSF 294

[Close]
BLAST of Cp4.1LG03g15520 vs. TAIR10
Match: AT5G15840.1 (AT5G15840.1 B-box type zinc finger protein with CCT domain)

HSP 1 Score: 136.7 bits (343), Expect = 2.1e-32
Identity = 95/220 (43.18%), Postives = 130/220 (59.09%), Query Frame = 1 

Query: 56  EEYLNFVEFNGN-----NNGFGNGDEEFEGLKNNYGGGGDSVVPIEFEGNKDDRILLQQS 115
           +EYLN V++N +        +    +     + +YGG  D VVP++ E ++  +   QQ+
Sbjct: 174 DEYLNLVDYNSSMDYKFTGEYSQHQQNCSVPQTSYGG--DRVVPLKLEESRGHQCHNQQN 233

Query: 116 YGGVVDASEFFHSASKPSYSYNAFLTHAISVSSMEVGVVPESTTAATVSDISISNMRPPR 175
           +   +      + +S   Y+ N  + H   +SSME GVVPEST   T +    S+ R P+
Sbjct: 234 FQFNIK-----YGSSGTHYNDNGSINHNAYISSMETGVVPESTACVTTA----SHPRTPK 293

Query: 176 GTIDLFSGTTAASAAAAVVQLPATQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYA 235
           GT++            A   +  TQLSPMDREARVLRYREK+KTRKFEKTIRYASRKAYA
Sbjct: 294 GTVE-------QQPDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYA 353

Query: 236 ETRPRIKGRFAKRTDVEVELDRKFSNPLTVDGGYGIVPFF 271
           E RPR+ GRFAKR ++E E ++ F+  L  + GYGIVP F
Sbjct: 354 EIRPRVNGRFAKR-EIEAE-EQGFNTMLMYNTGYGIVPSF 373

[Close]
BLAST of Cp4.1LG03g15520 vs. TAIR10
Match: AT5G24930.1 (AT5G24930.1 CONSTANS-like 4)

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-22
Identity = 87/207 (42.03%), Postives = 111/207 (53.62%), Query Frame = 1 

Query: 71  FGNGDEEFEGLKNNYGGGGDSVVPIEFEGNKDDRILLQQSYGGVVDASEFFHSASKPSYS 130
           +GN D + E L+ N   G D VVP+E   N+  RI          +  E   +     ++
Sbjct: 231 YGNVDPKVESLEQN-SSGTDGVVPVE---NRTVRIPTVNE-----NCFEMDFTGGSKGFT 290

Query: 131 YNA---FLTHAISVSSMEVGVVPESTTAATVSDISISNMRPPRGTIDLFSGTTAASAAAA 190
           Y      ++H++S SSMEVGVVP+     +V+D+S               G  A S A  
Sbjct: 291 YGGGYNCISHSVSSSSMEVGVVPDG---GSVADVSYPY------------GGPATSGADP 350

Query: 191 VVQLPATQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVE 250
             Q  A  L+  +REARV+RYREK+K RKFEKTIRYASRKAYAE RPRIKGRFAKRTD  
Sbjct: 351 GTQR-AVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTN 406

Query: 251 VELDRKFSNPLTVDG----GYGIVPFF 271
                  SN +   G    G+G+VP F
Sbjct: 411 E------SNDVVGHGGIFSGFGLVPTF 406

[Close]
BLAST of Cp4.1LG03g15520 vs. NCBI nr
Match: gi|659111102|ref|XP_008455579.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 2 [Cucumis melo])

HSP 1 Score: 361.3 bits (926), Expect = 1.5e-96
Identity = 217/340 (63.82%), Postives = 236/340 (69.41%), Query Frame = 1 

Query: 3   GGNGWGSIICEACETAPAQFICKADAASLCAACDAEIHSANPLARRHQR----------- 62
           GGNGW + ICEACE  PA+FICKADAASLCAACDAEIHSANPLARRHQR           
Sbjct: 12  GGNGWAAGICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPISSGGAMFR 71

Query: 63  ---EAEEEEYLNFV------------EFNGNNNG---FGNGDEEFEG------------- 122
              E +EEE  +++              N NNNG    G  DE+ E              
Sbjct: 72  SVEEEDEEEAASWLLMNPGKNNNDNKNNNSNNNGMFLLGGEDEDEEEDDDYLKFVEFNGN 131

Query: 123 ----------LKNNYGGGGDSVVPI-EFEGNKD-------------------DRILLQQS 182
                       NNYGGGGDSVVPI +FEGNKD                     ILL+QS
Sbjct: 132 NEEDDEFERLKNNNYGGGGDSVVPIDQFEGNKDHHHHLHHHLHHHHEQQQQNHEILLEQS 191

Query: 183 YGGVVDASEFFHSASKPSYSYNAFLTHAISVSSMEVGVVPESTTAATVSDISISNMRPPR 242
           YGG+VDASEFFH++SKPSYSYN FLTHAISVSSMEVGVVPESTT  T+SDISISN+RPP+
Sbjct: 192 YGGLVDASEFFHTSSKPSYSYNGFLTHAISVSSMEVGVVPESTT-TTMSDISISNVRPPK 251

Query: 243 GTIDLFSGTTAASAAAAVVQLPATQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYA 271
           GTIDLFSGTTAA  A   +Q+PA QLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYA
Sbjct: 252 GTIDLFSGTTAAEVAVG-IQMPAAQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYA 311

[Close]
BLAST of Cp4.1LG03g15520 vs. NCBI nr
Match: gi|449438975|ref|XP_004137263.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 2-like [Cucumis sativus])

HSP 1 Score: 344.0 bits (881), Expect = 2.4e-91
Identity = 211/335 (62.99%), Postives = 233/335 (69.55%), Query Frame = 1 

Query: 3   GGNGWGSIICEACETAPAQFICKADAASLCAACDAEIHSANPLARRHQR----------- 62
           GGNGWG++ICEACE  PA+FICKADAASLCAACDAEIHSANPLARRHQR           
Sbjct: 12  GGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPISRGGAMFR 71

Query: 63  ---EAEEEEYLNFV------------EFNGNNNGF----GNGDEEFEGLK-NNYGGGG-- 122
              E +EEE  +++              N NNNG     G  +E+ E LK   + G    
Sbjct: 72  SVEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYLKFVEFNGNNEE 131

Query: 123 -----------------DSVVPI-EFEGNK----------------DDRILLQQSYGGVV 182
                            DSVVPI +FEGNK                +  ILL+QSYGG+V
Sbjct: 132 DDDEFETLKNNNYGGGGDSVVPIDQFEGNKNHDHHLHHHHHEQQQQNHEILLEQSYGGLV 191

Query: 183 DASEFFHSASKPSYSYNAFLTHAISVSSMEVGVVPESTTAATVSDISISNMRPPRGTIDL 242
           DASEFFH++SKPS+SYN FLTHAISVSSMEVGVVPES TA  +SDISISNMRPP+GTIDL
Sbjct: 192 DASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPES-TATIMSDISISNMRPPKGTIDL 251

Query: 243 FSGTTAASAAAAVVQLPATQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPR 271
           FSG  AA  AAA  Q+PA QLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPR
Sbjct: 252 FSGMIAAEPAAA-SQMPAAQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPR 311

[Close]
BLAST of Cp4.1LG03g15520 vs. NCBI nr
Match: gi|568857577|ref|XP_006482341.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 2 [Citrus sinensis])

HSP 1 Score: 249.2 bits (635), Expect = 8.1e-63
Identity = 163/323 (50.46%), Postives = 196/323 (60.68%), Query Frame = 1 

Query: 11  ICEACETAPAQFICKADAASLCAACDAEIHSANPLARRHQR------------------- 70
           +CE+CE APA F+CKADAASLCAACDAEIHSANPLARRHQR                   
Sbjct: 62  VCESCEQAPAAFLCKADAASLCAACDAEIHSANPLARRHQRVPILPISGSVYGGRTGATP 121

Query: 71  ------EAEEEEYLNFVEF-----------NGNNNGF----------------------- 130
                 + +EEE  +++             NGNNNGF                       
Sbjct: 122 EGDHEDDQDEEEAASWLLLSNPGKNCGNGNNGNNNGFLFGGEVDEYLDLVDYTGGNQYLD 181

Query: 131 ----GNGDEEFEGLKNNYGGGGDSVVPIEFEGNKDDRILLQQSYGGVVDASEFFHSASKP 190
               GN +++  G+    G  GDSVVP++ E    D    QQ++   +D     + +SK 
Sbjct: 182 QYSNGNNNQQQHGVAQK-GYVGDSVVPVQCELANKDHHRHQQNFQMGLD-----YDSSKA 241

Query: 191 SYSYNAFLTHAISVSSMEVGVVPESTTAATVSDISISNMRPPRGTIDLFSGTTAASAAAA 250
            YSYN  ++H++SVSS ++GVVPES    T+SDISIS+ RPP+GTIDLFSG         
Sbjct: 242 GYSYNGSISHSVSVSSTDLGVVPES----TMSDISISHSRPPKGTIDLFSGPP------- 301

Query: 251 VVQLPATQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVE 271
            +Q+P  QL+PMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD E
Sbjct: 302 -IQMP-PQLTPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDAE 361

[Close]
BLAST of Cp4.1LG03g15520 vs. NCBI nr
Match: gi|641839955|gb|KDO58878.1| (hypothetical protein CISIN_1g017819mg [Citrus sinensis])

HSP 1 Score: 248.8 bits (634), Expect = 1.1e-62
Identity = 163/323 (50.46%), Postives = 196/323 (60.68%), Query Frame = 1 

Query: 11  ICEACETAPAQFICKADAASLCAACDAEIHSANPLARRHQR------------------- 70
           +CE+CE APA F+CKADAASLCAACDAEIHSANPLARRHQR                   
Sbjct: 62  VCESCEQAPAAFLCKADAASLCAACDAEIHSANPLARRHQRVPILPISGSVYGGRTGATP 121

Query: 71  ------EAEEEEYLNFVEF-----------NGNNNGF----------------------- 130
                 + +EEE  +++             NGNNNGF                       
Sbjct: 122 EGHHEDDQDEEEAASWLLLSNPGKNCGNGNNGNNNGFLFGGEVDEYLDLVDYTGGNQYLD 181

Query: 131 ----GNGDEEFEGLKNNYGGGGDSVVPIEFEGNKDDRILLQQSYGGVVDASEFFHSASKP 190
               GN +++  G+    G  GDSVVP++ E    D    QQ++   +D     + +SK 
Sbjct: 182 QYSNGNNNQQQHGVAQK-GYVGDSVVPVQCELANKDHHRHQQNFQLGLD-----YDSSKA 241

Query: 191 SYSYNAFLTHAISVSSMEVGVVPESTTAATVSDISISNMRPPRGTIDLFSGTTAASAAAA 250
            YSYN  ++H++SVSS ++GVVPES    T+SDISIS+ RPP+GTIDLFSG         
Sbjct: 242 GYSYNGSISHSVSVSSTDLGVVPES----TMSDISISHSRPPKGTIDLFSGPP------- 301

Query: 251 VVQLPATQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVE 271
            +Q+P  QL+PMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD E
Sbjct: 302 -IQMP-PQLTPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDAE 361

[Close]
BLAST of Cp4.1LG03g15520 vs. NCBI nr
Match: gi|567876585|ref|XP_006430882.1| (hypothetical protein CICLE_v10012022mg [Citrus clementina])

HSP 1 Score: 248.8 bits (634), Expect = 1.1e-62
Identity = 163/323 (50.46%), Postives = 196/323 (60.68%), Query Frame = 1 

Query: 11  ICEACETAPAQFICKADAASLCAACDAEIHSANPLARRHQR------------------- 70
           +CE+CE APA F+CKADAASLCAACDAEIHSANPLARRHQR                   
Sbjct: 62  VCESCEQAPAAFLCKADAASLCAACDAEIHSANPLARRHQRVPILPISGSVYGGRTGATP 121

Query: 71  ------EAEEEEYLNFVEF-----------NGNNNGF----------------------- 130
                 + +EEE  +++             NGNNNGF                       
Sbjct: 122 EGHHEDDQDEEEAASWLLLSNPGKNCGNGNNGNNNGFLFGGEVDEYLDLVDYTGGNQYLD 181

Query: 131 ----GNGDEEFEGLKNNYGGGGDSVVPIEFEGNKDDRILLQQSYGGVVDASEFFHSASKP 190
               GN +++  G+    G  GDSVVP++ E    D    QQ++   +D     + +SK 
Sbjct: 182 QYSTGNNNQQQHGVAQK-GYVGDSVVPVQCELANKDHHRHQQNFQLGLD-----YDSSKA 241

Query: 191 SYSYNAFLTHAISVSSMEVGVVPESTTAATVSDISISNMRPPRGTIDLFSGTTAASAAAA 250
            YSYN  ++H++SVSS ++GVVPES    T+SDISIS+ RPP+GTIDLFSG         
Sbjct: 242 GYSYNGSISHSVSVSSTDLGVVPES----TMSDISISHSRPPKGTIDLFSGPP------- 301

Query: 251 VVQLPATQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVE 271
            +Q+P  QL+PMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD E
Sbjct: 302 -IQMP-PQLTPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDAE 361

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g15520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
COL1_ARATH6.9e-3839.02Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1[more]
COL2_ARATH4.2e-3538.76Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1[more]
COL3_ARATH9.4e-3539.93Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1[more]
CONS_ARATH3.7e-3143.18Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1[more]
HD1_ORYSJ8.2e-3148.63Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2 SV=1[more]
BLAST of Cp4.1LG03g15520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY36_CUCSA1.7e-9162.99Uncharacterized protein OS=Cucumis sativus GN=Csa_4G124910 PE=4 SV=1[more]
A0A067EUU9_CITSI7.4e-6350.46Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017819mg PE=4 SV=1[more]
V4STR5_9ROSI7.4e-6350.46Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012022mg PE=4 SV=1[more]
A0A0K9RWH4_SPIOL4.8e-6252.72Uncharacterized protein OS=Spinacia oleracea GN=SOVF_021810 PE=4 SV=1[more]
B4YA14_OXYRB2.6e-6051.18CONSTANS-like protein 2 OS=Oxybasis rubra GN=COL2 PE=2 SV=1[more]
BLAST of Cp4.1LG03g15520 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G15850.13.9e-3939.02 CONSTANS-like 1[more]
AT3G02380.12.4e-3638.76 CONSTANS-like 2[more]
AT2G24790.15.3e-3639.93 CONSTANS-like 3[more]
AT5G15840.12.1e-3243.18 B-box type zinc finger protein with CCT domain[more]
AT5G24930.11.9e-2242.03 CONSTANS-like 4[more]
BLAST of Cp4.1LG03g15520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659111102|ref|XP_008455579.1|1.5e-9663.82PREDICTED: zinc finger protein CONSTANS-LIKE 2 [Cucumis melo][more]
gi|449438975|ref|XP_004137263.1|2.4e-9162.99PREDICTED: zinc finger protein CONSTANS-LIKE 2-like [Cucumis sativus][more]
gi|568857577|ref|XP_006482341.1|8.1e-6350.46PREDICTED: zinc finger protein CONSTANS-LIKE 2 [Citrus sinensis][more]
gi|641839955|gb|KDO58878.1|1.1e-6250.46hypothetical protein CISIN_1g017819mg [Citrus sinensis][more]
gi|567876585|ref|XP_006430882.1|1.1e-6250.46hypothetical protein CICLE_v10012022mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain
IPR000315Znf_B-box
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g15520.1Cp4.1LG03g15520.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 11..51
score: 1.
IPR000315B-box-type zinc fingerSMARTSM00336bboxneu5coord: 7..54
score: 1.
IPR000315B-box-type zinc fingerPROFILEPS50119ZF_BBOXcoord: 7..54
score: 9
IPR010402CCT domainPFAMPF06203CCTcoord: 201..243
score: 4.5
IPR010402CCT domainPROFILEPS51017CCTcoord: 201..243
score: 16
NoneNo IPR availablePANTHERPTHR31319FAMILY NOT NAMEDcoord: 11..270
score: 6.9
NoneNo IPR availablePANTHERPTHR31319:SF10ZINC FINGER PROTEIN CONSTANS-RELATEDcoord: 11..270
score: 6.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g15520CmaCh14G011350Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g15520CmaCh01G004380Cucurbita maxima (Rimu)cmacpeB495
Cp4.1LG03g15520CmoCh14G011660Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g15520CmoCh01G004710Cucurbita moschata (Rifu)cmocpeB454
Cp4.1LG03g15520Cla010793Watermelon (97103) v1cpewmB601
Cp4.1LG03g15520MELO3C018930Melon (DHL92) v3.5.1cpemeB590
Cp4.1LG03g15520ClCG07G016220Watermelon (Charleston Gray)cpewcgB572
Cp4.1LG03g15520Lsi07G009830Bottle gourd (USVL1VR-Ls)cpelsiB517
Cp4.1LG03g15520MELO3C018930.2Melon (DHL92) v3.6.1cpemedB700
Cp4.1LG03g15520Bhi01G001697Wax gourdcpewgoB0776
Cp4.1LG03g15520Carg20387Silver-seed gourdcarcpeB0983
Cp4.1LG03g15520Carg26753Silver-seed gourdcarcpeB1150
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g15520Cp4.1LG02g14120Cucurbita pepo (Zucchini)cpecpeB450
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g15520Cucumber (Gy14) v1cgycpeB0481
Cp4.1LG03g15520Wild cucumber (PI 183967)cpecpiB619
Cp4.1LG03g15520Cucumber (Chinese Long) v2cpecuB617
Cp4.1LG03g15520Cucumber (Gy14) v2cgybcpeB554
Cp4.1LG03g15520Cucumber (Chinese Long) v3cpecucB0769
Cp4.1LG03g15520Wax gourdcpewgoB0780