Cp4.1LG03g15330 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g15330
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLipid transfer protein
LocationCp4.1LG03 : 7940948 .. 7941726 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGTCATCAATTTGGCTGCAGTCTTAACAAACAAGAAGGTGTGAGGAGTGCGAAATTAATGAAAGGGGTGGCAATTACGTGCATACATTTCACTTCATGAGCCTATAAATCAAGGTTGAAGCCTTTGCCAAATACACACACATACCCAAAGAATGAAGAACCTTCATAGCTCAGGCCTTTGCCTTCTCGTGGTGGTGGCGATTCTCACCGGAGCTCACGTTGGGGAGGCGGTGAGTTGTAACCCCACGGAGCTGAGTCCATGTCTCAGTGCAATCACGTCAGCGGGGGTGCGGCCTACAGTTGCTTGCTGCCGGAAGTTGAAGCAGCAGCAACCATGCTTTTGTGGGTATCTAAAAGATCCAAGGTTCAAACCTTATGTACAATCTCCTCGCGCCAGAATGGTTGCTTCCATCTGCCATATCGCCGTCCCTAGGTGCTAGAACCCTATGCTCTCATATGAAACGGACGTTNTTCTTTCTGCGGTTGAAAACATCATAAGTTTTGTGTGTCACATTGTATTTCTTGAGCGACATATTAGTGTTGTGAGTACATTTGTTCTCCTTTCAGTGCACAACACCGTGTTGCTTAGTAAAATTTGGAGTTACACTATTCCAATCCTTCCCTTTTAACCTTGTTCCGTTGTCTTTTATCCAAAAAGAAATTTGTCTTTTATACTTAGATATGTCATCAATTTGGCTGCAGTCTTAACAAACAAGAAGGTGTGAGGAGTGCGAAATTAATGAAAGGGGTGGCAATTACGTGCATACATTTCACTTCA

mRNA sequence

TATGTCATCAATTTGGCTGCAGTCTTAACAAACAAGAAGAACCTTCATAGCTCAGGCCTTTGCCTTCTCGTGGTGGTGGCGATTCTCACCGGAGCTCACGTTGGGGAGGCGGTGAGTTGTAACCCCACGGAGCTGAGTCCATGTCTCAGTGCAATCACGTCAGCGGGGGTGCGGCCTACAGTTGCTTGCTGCCGGAAGTTGAAGCAGCAGCAACCATGCTTTTGTGGGTATCTAAAAGATCCAAGGTTCAAACCTTATGTACAATCTCCTCGCGCCAGAATGATATGTCATCAATTTGGCTGCAGTCTTAACAAACAAGAAGGTGTGAGGAGTGCGAAATTAATGAAAGGGGTGGCAATTACGTGCATACATTTCACTTCA

Coding sequence (CDS)

TATGTCATCAATTTGGCTGCAGTCTTAACAAACAAGAAGAACCTTCATAGCTCAGGCCTTTGCCTTCTCGTGGTGGTGGCGATTCTCACCGGAGCTCACGTTGGGGAGGCGGTGAGTTGTAACCCCACGGAGCTGAGTCCATGTCTCAGTGCAATCACGTCAGCGGGGGTGCGGCCTACAGTTGCTTGCTGCCGGAAGTTGAAGCAGCAGCAACCATGCTTTTGTGGGTATCTAAAAGATCCAAGGTTCAAACCTTATGTACAATCTCCTCGCGCCAGAATGATATGTCATCAATTTGGCTGCAGTCTTAACAAACAAGAAGGTGTGAGGAGTGCGAAATTAATGAAAGGGGTGGCAATTACGTGCATACATTTCACTTCA

Protein sequence

YVINLAAVLTNKKNLHSSGLCLLVVVAILTGAHVGEAVSCNPTELSPCLSAITSAGVRPTVACCRKLKQQQPCFCGYLKDPRFKPYVQSPRARMICHQFGCSLNKQEGVRSAKLMKGVAITCIHFTS
Homology
[Close]
BLAST of Cp4.1LG03g15330 vs. Swiss-Prot
Match: NLTP_VIGUN (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.7e-16
Identity = 44/94 (46.81%), Postives = 59/94 (62.77%), Query Frame = 1 

Query: 9   LTNKKNLHSSGLCLLVVVAI--LTGAHVGEAVSCNPTELSPCLSAITSAGVRPTVACCRK 68
           +T K  +  S +C +VVVA+  +    V EAV+CNPTELS C+ AIT  G +P+  CC K
Sbjct: 1   MTMKMKMKMSVVCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITG-GSKPSSTCCSK 60

Query: 69  LKQQQPCFCGYLKDPRFKPYVQSPRARMICHQFG 101
           LK Q+PC C Y+K+P  K YV SP A+ +    G
Sbjct: 61  LKVQEPCLCNYIKNPSLKQYVNSPGAKKVLSNCG 93

[Close]
BLAST of Cp4.1LG03g15330 vs. Swiss-Prot
Match: NLTP2_APIGA (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-13
Identity = 35/65 (53.85%), Postives = 43/65 (66.15%), Query Frame = 1 

Query: 39  SCNPTELSPCLSAITSAGVRPTVACCRKLKQQQPCFCGYLKDPRFKPYVQSPRARMICHQ 98
           +C+  +LSPCL+AIT     P+ ACC KLK+Q+PC CGYLKDP  K YV SP AR     
Sbjct: 2   TCSAVQLSPCLAAITK-NTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASS 61

Query: 99  FGCSL 104
            G +L
Sbjct: 62  CGVAL 65

[Close]
BLAST of Cp4.1LG03g15330 vs. Swiss-Prot
Match: NLTP2_PRUAR (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.7e-13
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 1 

Query: 38  VSCNPTELSPCLSAITSAGVRPTVACCRKLKQQQPCFCGYLKDPRFKPYVQSPRARMICH 97
           V+C+P +LSPCL  I S    PT  CC+KL++Q+PC CGYLK+P  + YV SP AR +  
Sbjct: 1   VTCSPVQLSPCLGPINSGAPSPT-TCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLAS 60

Query: 98  QFG 101
             G
Sbjct: 61  NCG 62

[Close]
BLAST of Cp4.1LG03g15330 vs. Swiss-Prot
Match: NLTP2_HORVU (Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.9e-11
Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 1 

Query: 22 LLVVVAILTGAHVGEAVSCNPTELSPCLSAITSAGVRPTVACCRKLKQQQPCFCGYLKDP 81
          +++VV +  GA  G   +C P +L+ C SAI   G +P+  CC  L+ QQ C C Y+KDP
Sbjct: 19 MVMVVTLAAGADAGAGAACEPAQLAVCASAILG-GTKPSGECCGNLRAQQGCLCQYVKDP 78

Query: 82 RFKPYVQSPRAR 94
           +  YV SP AR
Sbjct: 79 NYGHYVSSPHAR 89

[Close]
BLAST of Cp4.1LG03g15330 vs. Swiss-Prot
Match: NLT2G_WHEAT (Non-specific lipid-transfer protein 2G OS=Triticum aestivum PE=1 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 8.4e-10
Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 1 

Query: 22 LLVVVAILTGAHVGEAVSCNPTELSPCLSAITSAGVRPTVACCRKLKQQQPCFCGYLKDP 81
          L++ + +L  A  G   +C  ++L+ C SAI S G +P+  CC  L+ QQ CFC Y KDP
Sbjct: 13 LMLALVVLAAAPGGARAACQASQLAVCASAILS-GAKPSGECCGNLRAQQGCFCQYAKDP 72

Query: 82 RFKPYVQSPRAR 94
           +  Y++SP AR
Sbjct: 73 TYGQYIRSPHAR 83

[Close]
BLAST of Cp4.1LG03g15330 vs. TrEMBL
Match: A0A0A0KW80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141210 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-23
Identity = 56/85 (65.88%), Postives = 69/85 (81.18%), Query Frame = 1 

Query: 15 LHSSGLCLLVVVAI-LTGAHVGEAVSCNPTELSPCLSAITSAGVRPTVACCRKLKQQQPC 74
          +  +GLCLLVVVAI L+   +GEAVSCNPTELSPC+SAITS+   PT ACC+KL+QQ+PC
Sbjct: 4  VQGTGLCLLVVVAIFLSSVRLGEAVSCNPTELSPCVSAITSS-TAPTAACCQKLRQQEPC 63

Query: 75 FCGYLKDPRFKPYVQSPRARMICHQ 99
          +CGYLKDP++K Y +SPR R I  Q
Sbjct: 64 YCGYLKDPKYKAYAESPRVRAIASQ 87

[Close]
BLAST of Cp4.1LG03g15330 vs. TrEMBL
Match: A0A0A0KW09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141230 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.9e-18
Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 1 

Query: 12 KKNLHSSGLCLLV-------VVAILTGAHVGEAVSCNPTELSPCLSAITSAGVRPTVACC 71
          KK   S+ LCL V       VVA++TGA + +AV+CNP E+ PCL A+ S+ V PT  CC
Sbjct: 2  KKVSISTSLCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESS-VPPTAECC 61

Query: 72 RKLKQQQPCFCGYLKDPRFKPYVQSPRARMI 96
           KLK+Q+PCFC YLK P FKPY++SP A+ I
Sbjct: 62 EKLKEQEPCFCAYLKSPVFKPYLESPNAKKI 91

[Close]
BLAST of Cp4.1LG03g15330 vs. TrEMBL
Match: C6SZ93_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G088900 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.9e-17
Identity = 50/79 (63.29%), Postives = 58/79 (73.42%), Query Frame = 1 

Query: 18 SGLCLLVVVAILTGAHVG---EAVSCNPTELSPCLSAITSAGVRPTVACCRKLKQQQPCF 77
          S +C +VVVA+L  A VG   EAV+C PTELSPCL AITS G +P+ ACC KLKQQ+PC 
Sbjct: 5  SAMCAVVVVALLLLAEVGPMAEAVTCTPTELSPCLPAITS-GAKPSNACCTKLKQQKPCL 64

Query: 78 CGYLKDPRFKPYVQSPRAR 94
          CGYLK+   K YV SP AR
Sbjct: 65 CGYLKNASLKQYVNSPNAR 82

[Close]
BLAST of Cp4.1LG03g15330 vs. TrEMBL
Match: A0A0B2SRX2_GLYSO (Putative non-specific lipid-transfer protein AKCS9-like protein OS=Glycine soja GN=glysoja_035025 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.9e-17
Identity = 50/79 (63.29%), Postives = 58/79 (73.42%), Query Frame = 1 

Query: 18 SGLCLLVVVAILTGAHVG---EAVSCNPTELSPCLSAITSAGVRPTVACCRKLKQQQPCF 77
          S +C +VVVA+L  A VG   EAV+C PTELSPCL AITS G +P+ ACC KLKQQ+PC 
Sbjct: 5  SAMCAVVVVALLLLAEVGPMAEAVTCTPTELSPCLPAITS-GAKPSNACCTKLKQQKPCL 64

Query: 78 CGYLKDPRFKPYVQSPRAR 94
          CGYLK+   K YV SP AR
Sbjct: 65 CGYLKNASLKQYVNSPNAR 82

[Close]
BLAST of Cp4.1LG03g15330 vs. TrEMBL
Match: V4SY21_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013188mg PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.9e-16
Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1 

Query: 20 LCLLVVVAILTGAHVGEAVSCNPTELSPCLSAITSAGVRPTVACCRKLKQQQPCFCGYLK 79
          + +LV VA L+  HV EAV+C+PTELSPCL+A+TS+   P+ ACC KL+QQ+PC CGYL+
Sbjct: 15 MVVLVAVAALSQVHVAEAVTCSPTELSPCLAALTSSAP-PSGACCNKLRQQRPCLCGYLR 74

Query: 80 DPRFKPYVQSPRARMI 96
          +P  + YV SP A+ I
Sbjct: 75 NPNLRQYVNSPNAKRI 89

[Close]
BLAST of Cp4.1LG03g15330 vs. TAIR10
Match: AT3G18280.1 (AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 75.5 bits (184), Expect = 2.7e-14
Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = 1 

Query: 20 LCLLVVVAILTGAHVGEAVSCNPTELSPCLSAITSAGVRPTVACCRKLKQQQPCFCGYLK 79
          L  L  V ++  A   EAV+C+P +LSPC +AITS+   P+  CC KLK+Q+PC CGY++
Sbjct: 11 LFALAAVLLMILAPAAEAVTCSPMQLSPCATAITSSSP-PSALCCAKLKEQRPCLCGYMR 70

Query: 80 DPRFKPYVQSPRARMI 96
          +P  + +V +P AR +
Sbjct: 71 NPSLRRFVSTPNARKV 85

[Close]
BLAST of Cp4.1LG03g15330 vs. TAIR10
Match: AT1G48750.1 (AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 7.8e-14
Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = 1 

Query: 18 SGLCLLVVVAILTGAHVGEAVSCNPTELSPCLSAITSAGVRPTVACCRKLKQQQPCFCGY 77
          S L L   + +LT   V E V+C+P +L+ C +A+TS+   P+ ACC KL++QQPC CGY
Sbjct: 8  SVLALAAAILLLT-VPVAEGVTCSPMQLASCAAAMTSSSP-PSEACCTKLREQQPCLCGY 67

Query: 78 LKDPRFKPYVQSPRARMI 96
          +++P  + YV SP AR +
Sbjct: 68 MRNPTLRQYVSSPNARKV 83

[Close]
BLAST of Cp4.1LG03g15330 vs. TAIR10
Match: AT1G73780.1 (AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 70.9 bits (172), Expect = 6.6e-13
Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 1 

Query: 22  LLVVVAILTGAHVGEAVSCNPTELSPCLSAITSAGVRPTVACCRKLKQQQPCFCGYLKDP 81
           +L+++ +     V     CNP +LSPCL  I   G  P+  CC K+K+QQ C C YLK+P
Sbjct: 15  ILLILIVAQENRVAAVDPCNPAQLSPCLETIMK-GSEPSDLCCSKVKEQQHCICQYLKNP 74

Query: 82  RFKPYVQSPRARMICHQFGCSLNK 106
            FK ++ SP A++I     C   K
Sbjct: 75  NFKSFLNSPNAKIIATDCHCPYPK 97

[Close]
BLAST of Cp4.1LG03g15330 vs. TAIR10
Match: AT1G66850.1 (AT1G66850.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 1.9e-12
Identity = 31/66 (46.97%), Postives = 42/66 (63.64%), Query Frame = 1 

Query: 30 TGAHVGEAVSCNPTELSPCLSAITSAGVRPTVACCRKLKQQQPCFCGYLKDPRFKPYVQS 89
          TG      V+C+  +L PCL+AIT  G +P+ ACC KL +QQ C CG+ K+P F  Y+ S
Sbjct: 27 TGDTGNVGVTCDARQLQPCLAAITGGG-QPSGACCAKLTEQQSCLCGFAKNPAFAQYISS 86

Query: 90 PRARMI 96
          P AR +
Sbjct: 87 PNARKV 91

[Close]
BLAST of Cp4.1LG03g15330 vs. TAIR10
Match: AT5G38170.1 (AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 1.6e-11
Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 1 

Query: 35 GEA-VSCNPTELSPCLSAITSAGVRPTVACCRKLKQQQPCFCGYLKDPRFKPYVQSPRAR 94
          GEA V+C+  +LS C + + + GV P+  CC KLK+QQPCFC Y+KDPR+  YV S  A+
Sbjct: 32 GEADVTCDAVQLSSCATPMLT-GVPPSTECCGKLKEQQPCFCTYIKDPRYSQYVGSANAK 90

[Close]
BLAST of Cp4.1LG03g15330 vs. NCBI nr
Match: gi|659086707|ref|XP_008444076.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo])

HSP 1 Score: 120.2 bits (300), Expect = 2.7e-24
Identity = 58/85 (68.24%), Postives = 68/85 (80.00%), Query Frame = 1 

Query: 15 LHSSGLCLLVVVAI-LTGAHVGEAVSCNPTELSPCLSAITSAGVRPTVACCRKLKQQQPC 74
          L   GLCLLVVVAI LTG  +GEA SCNPTELSPC+SAITS+   PT ACC+KL+QQ+PC
Sbjct: 3  LQGPGLCLLVVVAIFLTGVRLGEAASCNPTELSPCVSAITSS-TAPTAACCQKLRQQEPC 62

Query: 75 FCGYLKDPRFKPYVQSPRARMICHQ 99
          +CGYLKDP++K Y +SPR R I  Q
Sbjct: 63 YCGYLKDPKYKAYAESPRVRAIASQ 86

[Close]
BLAST of Cp4.1LG03g15330 vs. NCBI nr
Match: gi|700198655|gb|KGN53813.1| (hypothetical protein Csa_4G141210 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-23
Identity = 56/85 (65.88%), Postives = 69/85 (81.18%), Query Frame = 1 

Query: 15 LHSSGLCLLVVVAI-LTGAHVGEAVSCNPTELSPCLSAITSAGVRPTVACCRKLKQQQPC 74
          +  +GLCLLVVVAI L+   +GEAVSCNPTELSPC+SAITS+   PT ACC+KL+QQ+PC
Sbjct: 4  VQGTGLCLLVVVAIFLSSVRLGEAVSCNPTELSPCVSAITSS-TAPTAACCQKLRQQEPC 63

Query: 75 FCGYLKDPRFKPYVQSPRARMICHQ 99
          +CGYLKDP++K Y +SPR R I  Q
Sbjct: 64 YCGYLKDPKYKAYAESPRVRAIASQ 87

[Close]
BLAST of Cp4.1LG03g15330 vs. NCBI nr
Match: gi|659086709|ref|XP_008444077.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo])

HSP 1 Score: 98.6 bits (244), Expect = 8.3e-18
Identity = 50/96 (52.08%), Postives = 65/96 (67.71%), Query Frame = 1 

Query: 12  KKNLHSSGLCL-------LVVVAILTGAHVGEAVSCNPTELSPCLSAITSAGVRPTVACC 71
           KK   SS LCL       ++VVA++TGA + +AV+CNPTE+ PCL A+ S+ V PT  CC
Sbjct: 2   KKVSISSTLCLSASMMATVMVVALITGARLADAVNCNPTEMRPCLPALESS-VPPTAECC 61

Query: 72  RKLKQQQPCFCGYLKDPRFKPYVQSPRARMICHQFG 101
            KLK+Q+PCFC YLK P FK Y++SP A+ I    G
Sbjct: 62  EKLKEQEPCFCEYLKSPIFKRYLESPNAKKIASSCG 96

[Close]
BLAST of Cp4.1LG03g15330 vs. NCBI nr
Match: gi|659086713|ref|XP_008444080.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo])

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-17
Identity = 52/95 (54.74%), Postives = 64/95 (67.37%), Query Frame = 1 

Query: 13  KNLHSSGLCLLVV--VAILTGAHVGEAVSCNPTELSPCLSAITSAGVRPTVACCRKLKQQ 72
           KNL  + L LLVV  VA+LTGA V EAV+CN  +LSPC+ AITS    P+  CC KL++Q
Sbjct: 2   KNLRFTSLHLLVVAIVALLTGARVAEAVTCNTMQLSPCIGAITSTAP-PSTTCCSKLREQ 61

Query: 73  QPCFCGYLKDPRFKPYVQSPRARMICHQFGCSLNK 106
           QPCFCGY+K+P    YV+S RA+ I    G  L K
Sbjct: 62  QPCFCGYMKNPSLGGYVKSARAKAIISTCGVPLPK 95

[Close]
BLAST of Cp4.1LG03g15330 vs. NCBI nr
Match: gi|700198657|gb|KGN53815.1| (hypothetical protein Csa_4G141230 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 1.4e-17
Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 1 

Query: 12 KKNLHSSGLCLLV-------VVAILTGAHVGEAVSCNPTELSPCLSAITSAGVRPTVACC 71
          KK   S+ LCL V       VVA++TGA + +AV+CNP E+ PCL A+ S+ V PT  CC
Sbjct: 2  KKVSISTSLCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESS-VPPTAECC 61

Query: 72 RKLKQQQPCFCGYLKDPRFKPYVQSPRARMI 96
           KLK+Q+PCFC YLK P FKPY++SP A+ I
Sbjct: 62 EKLKEQEPCFCAYLKSPVFKPYLESPNAKKI 91

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g15330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NLTP_VIGUN2.7e-1646.81Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=... [more]
NLTP2_APIGA1.2e-1353.85Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=... [more]
NLTP2_PRUAR4.7e-1350.79Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1[more]
NLTP2_HORVU9.9e-1143.06Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=... [more]
NLT2G_WHEAT8.4e-1041.67Non-specific lipid-transfer protein 2G OS=Triticum aestivum PE=1 SV=2[more]
BLAST of Cp4.1LG03g15330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KW80_CUCSA1.2e-2365.88Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141210 PE=4 SV=1[more]
A0A0A0KW09_CUCSA9.9e-1853.85Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141230 PE=4 SV=1[more]
C6SZ93_SOYBN2.9e-1763.29Uncharacterized protein OS=Glycine max GN=GLYMA_02G088900 PE=2 SV=1[more]
A0A0B2SRX2_GLYSO2.9e-1763.29Putative non-specific lipid-transfer protein AKCS9-like protein OS=Glycine soja ... [more]
V4SY21_9ROSI1.9e-1656.58Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013188mg PE=4 SV=1[more]
BLAST of Cp4.1LG03g15330 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18280.12.7e-1444.74 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G48750.17.8e-1444.87 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G73780.16.6e-1339.29 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G66850.11.9e-1246.97 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G38170.11.6e-1151.67 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of Cp4.1LG03g15330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659086707|ref|XP_008444076.1|2.7e-2468.24PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo][more]
gi|700198655|gb|KGN53813.1|1.7e-2365.88hypothetical protein Csa_4G141210 [Cucumis sativus][more]
gi|659086709|ref|XP_008444077.1|8.3e-1852.08PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo][more]
gi|659086713|ref|XP_008444080.1|1.1e-1754.74PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo][more]
gi|700198657|gb|KGN53815.1|1.4e-1753.85hypothetical protein Csa_4G141230 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g15330.1Cp4.1LG03g15330.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 23..96
score: 2.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 39..96
score: 7.65
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 39..100
score: 6.2
NoneNo IPR availablePANTHERPTHR33214FAMILY NOT NAMEDcoord: 22..95
score: 3.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g15330CmaCh01G004080Cucurbita maxima (Rimu)cmacpeB495
Cp4.1LG03g15330CmaCh14G011680Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g15330CmoCh14G011940Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g15330Cla010770Watermelon (97103) v1cpewmB603
Cp4.1LG03g15330Csa4G135200Cucumber (Chinese Long) v2cpecuB617
Cp4.1LG03g15330CSPI04G10260Wild cucumber (PI 183967)cpecpiB619
Cp4.1LG03g15330Lsi07G009300Bottle gourd (USVL1VR-Ls)cpelsiB517
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g15330Cp4.1LG02g13790Cucurbita pepo (Zucchini)cpecpeB450
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g15330Wax gourdcpewgoB0776
Cp4.1LG03g15330Wax gourdcpewgoB0780
Cp4.1LG03g15330Cucurbita moschata (Rifu)cmocpeB454
Cp4.1LG03g15330Watermelon (Charleston Gray)cpewcgB573
Cp4.1LG03g15330Melon (DHL92) v3.5.1cpemeB590
Cp4.1LG03g15330Cucumber (Gy14) v2cgybcpeB554
Cp4.1LG03g15330Melon (DHL92) v3.6.1cpemedB700
Cp4.1LG03g15330Silver-seed gourdcarcpeB0455