Cp4.1LG03g15310 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g15310
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLipid transfer protein
LocationCp4.1LG03 : 7976686 .. 7976997 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTCATCTTTGTTTTCAACAACAATGAAGAAAAGGCTTTGCCTTTTGGTGGCAGTGATGGCGATGGTGGCGCTCCTCACTGGAGCAGGAGCGGCAGAGGCGGTGAATTGCGATCCGATGGAGATGAGAGCATGTCTTCCTGCAATCAAATCCTCAGAGCCGCCGACAGCGGAATGCTGTGATAAAGTGAAGAAGCAAGAGGGATGCCTTTGTGAATACCTGAAAAGCCCAATATTGAAGCCTTATTTAGAGTCTCCCAATGCTAAAAAGATAGCTTCTTCCTGTGGCATTCCCATCCCCACCTGCTAG

mRNA sequence

ATGTATTCATCTTTGTTTTCAACAACAATGAAGAAAAGGCTTTGCCTTTTGGTGGCAGTGATGGCGATGGTGGCGCTCCTCACTGGAGCAGGAGCGGCAGAGGCGGTGAATTGCGATCCGATGGAGATGAGAGCATGTCTTCCTGCAATCAAATCCTCAGAGCCGCCGACAGCGGAATGCTGTGATAAAGTGAAGAAGCAAGAGGGATGCCTTTGTGAATACCTGAAAAGCCCAATATTGAAGCCTTATTTAGAGTCTCCCAATGCTAAAAAGATAGCTTCTTCCTGTGGCATTCCCATCCCCACCTGCTAG

Coding sequence (CDS)

ATGTATTCATCTTTGTTTTCAACAACAATGAAGAAAAGGCTTTGCCTTTTGGTGGCAGTGATGGCGATGGTGGCGCTCCTCACTGGAGCAGGAGCGGCAGAGGCGGTGAATTGCGATCCGATGGAGATGAGAGCATGTCTTCCTGCAATCAAATCCTCAGAGCCGCCGACAGCGGAATGCTGTGATAAAGTGAAGAAGCAAGAGGGATGCCTTTGTGAATACCTGAAAAGCCCAATATTGAAGCCTTATTTAGAGTCTCCCAATGCTAAAAAGATAGCTTCTTCCTGTGGCATTCCCATCCCCACCTGCTAG

Protein sequence

MYSSLFSTTMKKRLCLLVAVMAMVALLTGAGAAEAVNCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGIPIPTC
Homology
[Close]
BLAST of Cp4.1LG03g15310 vs. Swiss-Prot
Match: NLTP_VIGUN (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.0e-18
Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 1 

Query: 10  MKKRLCLLVAVMAMVALLTGAG-AAEAVNCDPMEMRACLPAIKSSEPPTAECCDKVKKQE 69
           MK ++ ++ AV+ +   L   G  AEAV C+P E+ +C+PAI     P++ CC K+K QE
Sbjct: 5   MKMKMSVVCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQE 64

Query: 70  GCLCEYLKSPILKPYLESPNAKKIASSCGIPIPTC 104
            CLC Y+K+P LK Y+ SP AKK+ S+CG+  P C
Sbjct: 65  PCLCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99

[Close]
BLAST of Cp4.1LG03g15310 vs. Swiss-Prot
Match: NLTP2_PRUAR (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.3e-16
Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 1 

Query: 36  VNCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASS 95
           V C P+++  CL  I S  P    CC K+++Q  CLC YLK+P L+ Y+ SPNA+K+AS+
Sbjct: 1   VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 96  CGIPIPTC 104
           CG+P+P C
Sbjct: 61  CGVPVPQC 68

[Close]
BLAST of Cp4.1LG03g15310 vs. Swiss-Prot
Match: NLTP2_HORVU (Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.6e-14
Identity = 35/94 (37.23%), Postives = 54/94 (57.45%), Query Frame = 1 

Query: 10  MKKRLCLLVAVMAMVALLTGAGAAEAVNCDPMEMRACLPAIKSSEPPTAECCDKVKKQEG 69
           M+K   + V ++ +V L  GA A     C+P ++  C  AI     P+ ECC  ++ Q+G
Sbjct: 9   MRKEAAVAVMMVMVVTLAAGADAGAGAACEPAQLAVCASAILGGTKPSGECCGNLRAQQG 68

Query: 70  CLCEYLKSPILKPYLESPNAKKIASSCGIPIPTC 104
           CLC+Y+K P    Y+ SP+A+   + CGIP+P C
Sbjct: 69  CLCQYVKDPNYGHYVSSPHARDTLNLCGIPVPHC 102

[Close]
BLAST of Cp4.1LG03g15310 vs. Swiss-Prot
Match: NLTPX_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP-2 PE=3 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 2.7e-14
Identity = 40/95 (42.11%), Postives = 55/95 (57.89%), Query Frame = 1 

Query: 10  MKKRLCLLVAVMAMVALLTGAGAAEA-VNCDPMEMRACLPAIKSSEPPTAECCDKVKKQE 69
           M +RL +LV  +AMVA   G     A  +C+  ++  C  AI     PTA CC  ++ Q+
Sbjct: 1   MMRRLAVLVLAVAMVAACGGGVVGVAGASCNAGQLTVCAGAIAGGARPTAACCSSLRAQQ 60

Query: 70  GCLCEYLKSPILKPYLESPNAKKIASSCGIPIPTC 104
           GC C++ K P    Y+ SPNA+K  SSCGI +PTC
Sbjct: 61  GCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC 95

[Close]
BLAST of Cp4.1LG03g15310 vs. Swiss-Prot
Match: NLTPX_ORYSJ (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica GN=LTP-2 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 7.7e-14
Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = 1 

Query: 10  MKKRLCLLVAVMAMVALLTGAGAAEA-VNCDPMEMRACLPAIKSSEPPTAECCDKVKKQE 69
           M ++L +LV  +AMVA   G     A   C+  ++  C  AI     PTA CC  ++ Q+
Sbjct: 1   MMRKLAVLVLAVAMVAACGGGVVGVAGAGCNAGQLTVCTGAIAGGARPTAACCSSLRAQQ 60

Query: 70  GCLCEYLKSPILKPYLESPNAKKIASSCGIPIPTC 104
           GC C++ K P    Y+ SPNA+K  SSCGI +PTC
Sbjct: 61  GCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC 95

[Close]
BLAST of Cp4.1LG03g15310 vs. TrEMBL
Match: A0A0A0KW09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141230 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.7e-31
Identity = 69/93 (74.19%), Postives = 80/93 (86.02%), Query Frame = 1 

Query: 14  LCLLVAVMAMV---ALLTGAGAAEAVNCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGC 73
           LCL V VMAMV   AL+TGAG A+AVNC+PMEMR CLPA++SS PPTAECC+K+K+QE C
Sbjct: 10  LCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKLKEQEPC 69

Query: 74  LCEYLKSPILKPYLESPNAKKIASSCGIPIPTC 104
            C YLKSP+ KPYLESPNAKKIA+SC +PIPTC
Sbjct: 70  FCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 102

[Close]
BLAST of Cp4.1LG03g15310 vs. TrEMBL
Match: B9H330_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09510g PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 6.6e-20
Identity = 46/92 (50.00%), Postives = 66/92 (71.74%), Query Frame = 1 

Query: 12  KRLCLLVAVMAMVALLTGAGAAEAVNCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCL 71
           K+  LLV ++ +V LL  A  ++AV C+P ++  CLPAI SS PP+  CC K+K+Q+ CL
Sbjct: 2   KKASLLVTMVVVVMLLAEAKVSQAVTCNPAQLSPCLPAISSSSPPSTTCCSKLKEQKPCL 61

Query: 72  CEYLKSPILKPYLESPNAKKIASSCGIPIPTC 104
           C YLK P LK ++ SP A+K+AS+CG+P P+C
Sbjct: 62  CGYLKDPALKQFVSSPGARKVASACGVPYPSC 93

[Close]
BLAST of Cp4.1LG03g15310 vs. TrEMBL
Match: I1N5L5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G002300 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 8.6e-20
Identity = 48/95 (50.53%), Postives = 67/95 (70.53%), Query Frame = 1 

Query: 10  MKKRLC-LLVAVMAMVALLTGAGAAEAVNCDPMEMRACLPAIKSSEPPTAECCDKVKKQE 69
           M K++C   + VMA + L+  +  AEAV C P+E+  CL AI SS PP+  CC KV++Q 
Sbjct: 3   MMKKVCGFAIVVMAALFLVEMSPMAEAVTCSPVELSPCLGAITSSSPPSTTCCQKVREQR 62

Query: 70  GCLCEYLKSPILKPYLESPNAKKIASSCGIPIPTC 104
            CLC YLK+P L+PY+ SP ++++ASSCG+P PTC
Sbjct: 63  PCLCGYLKNPSLRPYVNSPGSRRVASSCGVPFPTC 97

[Close]
BLAST of Cp4.1LG03g15310 vs. TrEMBL
Match: A0A0B2QIV0_GLYSO (Putative non-specific lipid-transfer protein AKCS9 OS=Glycine soja GN=glysoja_037194 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 8.6e-20
Identity = 48/95 (50.53%), Postives = 67/95 (70.53%), Query Frame = 1 

Query: 10  MKKRLC-LLVAVMAMVALLTGAGAAEAVNCDPMEMRACLPAIKSSEPPTAECCDKVKKQE 69
           M K++C   + VMA + L+  +  AEAV C P+E+  CL AI SS PP+  CC KV++Q 
Sbjct: 3   MMKKVCGFAIVVMAALFLVEMSPMAEAVTCSPVELSPCLGAITSSSPPSTTCCQKVREQR 62

Query: 70  GCLCEYLKSPILKPYLESPNAKKIASSCGIPIPTC 104
            CLC YLK+P L+PY+ SP ++++ASSCG+P PTC
Sbjct: 63  PCLCGYLKNPSLRPYVNSPGSRRVASSCGVPFPTC 97

[Close]
BLAST of Cp4.1LG03g15310 vs. TrEMBL
Match: A0A0B2R6M8_GLYSO (Non-specific lipid-transfer protein 2 OS=Glycine soja GN=glysoja_022186 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.5e-19
Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 1 

Query: 10  MKKRLCLLVAVMAMVALLTGAGA-AEAVNCDPMEMRACLPAIKSSEPPTAECCDKVKKQE 69
           M K++C    VM  V LL      AEAV C P+E+  CL AI SS+PP+  CC KV++Q 
Sbjct: 2   MMKKVCGFAIVMVAVQLLVEVSPKAEAVTCTPVELSPCLGAITSSQPPSTICCQKVREQR 61

Query: 70  GCLCEYLKSPILKPYLESPNAKKIASSCGIPIPTC 104
            CLC YLK+P L+PY  SP ++++ASSCG+P PTC
Sbjct: 62  QCLCGYLKNPSLRPYANSPGSRRVASSCGVPFPTC 96

[Close]
BLAST of Cp4.1LG03g15310 vs. TAIR10
Match: AT3G18280.1 (AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 91.3 bits (225), Expect = 3.8e-19
Identity = 43/94 (45.74%), Postives = 63/94 (67.02%), Query Frame = 1 

Query: 10  MKKRLCLLVAVMAMVALLTGAGAAEAVNCDPMEMRACLPAIKSSEPPTAECCDKVKKQEG 69
           M K   + +  +A V L+  A AAEAV C PM++  C  AI SS PP+A CC K+K+Q  
Sbjct: 3   MIKTTMVSLFALAAVLLMILAPAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRP 62

Query: 70  CLCEYLKSPILKPYLESPNAKKIASSCGIPIPTC 104
           CLC Y+++P L+ ++ +PNA+K++ SC +PIP C
Sbjct: 63  CLCGYMRNPSLRRFVSTPNARKVSKSCKLPIPRC 96

[Close]
BLAST of Cp4.1LG03g15310 vs. TAIR10
Match: AT1G48750.1 (AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 90.1 bits (222), Expect = 8.5e-19
Identity = 40/94 (42.55%), Postives = 62/94 (65.96%), Query Frame = 1 

Query: 10  MKKRLCLLVAVMAMVALLTGAGAAEAVNCDPMEMRACLPAIKSSEPPTAECCDKVKKQEG 69
           M K + + V  +A   LL     AE V C PM++ +C  A+ SS PP+  CC K+++Q+ 
Sbjct: 1   MVKVMWVSVLALAAAILLLTVPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQP 60

Query: 70  CLCEYLKSPILKPYLESPNAKKIASSCGIPIPTC 104
           CLC Y+++P L+ Y+ SPNA+K+++SC IP P+C
Sbjct: 61  CLCGYMRNPTLRQYVSSPNARKVSNSCKIPSPSC 94

[Close]
BLAST of Cp4.1LG03g15310 vs. TAIR10
Match: AT1G07747.1 (AT1G07747.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 79.7 bits (195), Expect = 1.1e-15
Identity = 36/94 (38.30%), Postives = 58/94 (61.70%), Query Frame = 1 

Query: 10  MKKRLCLLVAVMAMVALLTGAGAAEAVNCDPMEMRACLPAIKSSEPPTAECCDKVKKQEG 69
           MK +   LV V  +++ +    A E   C   +++ACLP I    PP+ +CC K+K ++ 
Sbjct: 1   MKMKFTTLVFVAFVLSSMAPTKAEEKAACVVTDLKACLPDIIGETPPSTKCCTKLKDKKS 60

Query: 70  CLCEYLKSPILKPYLESPNAKKIASSCGIPIPTC 104
           C CEYLK+P++ PY+ S  AK++  +CG+P+P C
Sbjct: 61  CFCEYLKNPLIAPYMTS--AKQVLEACGVPVPVC 92

[Close]
BLAST of Cp4.1LG03g15310 vs. TAIR10
Match: AT5G38160.1 (AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 77.4 bits (189), Expect = 5.7e-15
Identity = 31/88 (35.23%), Postives = 54/88 (61.36%), Query Frame = 1 

Query: 16  LLVAVMAMVALLTGAGAAEAVNCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYL 75
           +L  V     ++ G+G    V CD  ++ +C+ A+ +  PP+ +CC K+K+ E CLC Y+
Sbjct: 16  MLSPVPVKARVVKGSGEEVNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYI 75

Query: 76  KSPILKPYLESPNAKKIASSCGIPIPTC 104
           ++P+   Y+ SPNA+K  ++C +  PTC
Sbjct: 76  QNPLYSSYVTSPNARKTLAACDVAYPTC 103

[Close]
BLAST of Cp4.1LG03g15310 vs. TAIR10
Match: AT1G73780.1 (AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 75.1 bits (183), Expect = 2.8e-14
Identity = 31/66 (46.97%), Postives = 42/66 (63.64%), Query Frame = 1 

Query: 38  CDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCG 97
           C+P ++  CL  I     P+  CC KVK+Q+ C+C+YLK+P  K +L SPNAK IA+ C 
Sbjct: 33  CNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQYLKNPNFKSFLNSPNAKIIATDCH 92

Query: 98  IPIPTC 104
            P P C
Sbjct: 93  CPYPKC 98

[Close]
BLAST of Cp4.1LG03g15310 vs. NCBI nr
Match: gi|700198657|gb|KGN53815.1| (hypothetical protein Csa_4G141230 [Cucumis sativus])

HSP 1 Score: 143.3 bits (360), Expect = 2.4e-31
Identity = 69/93 (74.19%), Postives = 80/93 (86.02%), Query Frame = 1 

Query: 14  LCLLVAVMAMV---ALLTGAGAAEAVNCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGC 73
           LCL V VMAMV   AL+TGAG A+AVNC+PMEMR CLPA++SS PPTAECC+K+K+QE C
Sbjct: 10  LCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKLKEQEPC 69

Query: 74  LCEYLKSPILKPYLESPNAKKIASSCGIPIPTC 104
            C YLKSP+ KPYLESPNAKKIA+SC +PIPTC
Sbjct: 70  FCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 102

[Close]
BLAST of Cp4.1LG03g15310 vs. NCBI nr
Match: gi|659086709|ref|XP_008444077.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo])

HSP 1 Score: 138.7 bits (348), Expect = 5.9e-30
Identity = 68/98 (69.39%), Postives = 81/98 (82.65%), Query Frame = 1 

Query: 9   TMKKRLCLLVAVMA---MVALLTGAGAAEAVNCDPMEMRACLPAIKSSEPPTAECCDKVK 68
           ++   LCL  ++MA   +VAL+TGA  A+AVNC+P EMR CLPA++SS PPTAECC+K+K
Sbjct: 5   SISSTLCLSASMMATVMVVALITGARLADAVNCNPTEMRPCLPALESSVPPTAECCEKLK 64

Query: 69  KQEGCLCEYLKSPILKPYLESPNAKKIASSCGIPIPTC 104
           +QE C CEYLKSPI K YLESPNAKKIASSCGIPIPTC
Sbjct: 65  EQEPCFCEYLKSPIFKRYLESPNAKKIASSCGIPIPTC 102

[Close]
BLAST of Cp4.1LG03g15310 vs. NCBI nr
Match: gi|694439405|ref|XP_009346593.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Pyrus x bretschneideri])

HSP 1 Score: 112.8 bits (281), Expect = 3.5e-22
Identity = 49/89 (55.06%), Postives = 69/89 (77.53%), Query Frame = 1 

Query: 15  CLLVAVMAMVALLTGAGAAEAVNCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEY 74
           CL+VA++  VAL   A   EAV C P+E+  CL AI+S  PP+A CC+K+K+Q+ C CEY
Sbjct: 11  CLMVAMV--VALCDEARTVEAVTCSPLELSPCLEAIRSGAPPSATCCEKLKEQQPCFCEY 70

Query: 75  LKSPILKPYLESPNAKKIASSCGIPIPTC 104
           +K+P+LKPY+++PNAKK+AS+CG+P P C
Sbjct: 71  IKNPVLKPYIDNPNAKKVASACGVPFPQC 97

[Close]
BLAST of Cp4.1LG03g15310 vs. NCBI nr
Match: gi|658053478|ref|XP_008362493.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Malus domestica])

HSP 1 Score: 108.6 bits (270), Expect = 6.5e-21
Identity = 49/89 (55.06%), Postives = 65/89 (73.03%), Query Frame = 1 

Query: 15  CLLVAVMAMVALLTGAGAAEAVNCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEY 74
           CL+VAV   VAL       EAV C P+E+  CL AI+S  PP+A CC+K+K+Q+ CLCEY
Sbjct: 11  CLMVAVX--VALCDEVRTTEAVTCSPLELSPCLEAIRSXTPPSATCCEKLKEQQPCLCEY 70

Query: 75  LKSPILKPYLESPNAKKIASSCGIPIPTC 104
           +K+P LKPY+ +PNAKK+A +CG+P P C
Sbjct: 71  IKNPALKPYINNPNAKKVAXACGVPFPQC 97

[Close]
BLAST of Cp4.1LG03g15310 vs. NCBI nr
Match: gi|224079367|ref|XP_002305838.1| (hypothetical protein POPTR_0004s09510g [Populus trichocarpa])

HSP 1 Score: 104.8 bits (260), Expect = 9.4e-20
Identity = 46/92 (50.00%), Postives = 66/92 (71.74%), Query Frame = 1 

Query: 12  KRLCLLVAVMAMVALLTGAGAAEAVNCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCL 71
           K+  LLV ++ +V LL  A  ++AV C+P ++  CLPAI SS PP+  CC K+K+Q+ CL
Sbjct: 2   KKASLLVTMVVVVMLLAEAKVSQAVTCNPAQLSPCLPAISSSSPPSTTCCSKLKEQKPCL 61

Query: 72  CEYLKSPILKPYLESPNAKKIASSCGIPIPTC 104
           C YLK P LK ++ SP A+K+AS+CG+P P+C
Sbjct: 62  CGYLKDPALKQFVSSPGARKVASACGVPYPSC 93

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g15310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NLTP_VIGUN1.0e-1845.26Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=... [more]
NLTP2_PRUAR6.3e-1648.53Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1[more]
NLTP2_HORVU1.6e-1437.23Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=... [more]
NLTPX_ORYSI2.7e-1442.11Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP-2 PE=... [more]
NLTPX_ORYSJ7.7e-1441.05Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica GN=LTP-2 P... [more]
BLAST of Cp4.1LG03g15310 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KW09_CUCSA1.7e-3174.19Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141230 PE=4 SV=1[more]
B9H330_POPTR6.6e-2050.00Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09510g PE=4 SV=1[more]
I1N5L5_SOYBN8.6e-2050.53Uncharacterized protein OS=Glycine max GN=GLYMA_19G002300 PE=4 SV=1[more]
A0A0B2QIV0_GLYSO8.6e-2050.53Putative non-specific lipid-transfer protein AKCS9 OS=Glycine soja GN=glysoja_03... [more]
A0A0B2R6M8_GLYSO2.5e-1951.58Non-specific lipid-transfer protein 2 OS=Glycine soja GN=glysoja_022186 PE=4 SV=... [more]
BLAST of Cp4.1LG03g15310 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18280.13.8e-1945.74 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G48750.18.5e-1942.55 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G07747.11.1e-1538.30 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G38160.15.7e-1535.23 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G73780.12.8e-1446.97 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of Cp4.1LG03g15310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198657|gb|KGN53815.1|2.4e-3174.19hypothetical protein Csa_4G141230 [Cucumis sativus][more]
gi|659086709|ref|XP_008444077.1|5.9e-3069.39PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo][more]
gi|694439405|ref|XP_009346593.1|3.5e-2255.06PREDICTED: non-specific lipid-transfer protein 2-like [Pyrus x bretschneideri][more]
gi|658053478|ref|XP_008362493.1|6.5e-2155.06PREDICTED: non-specific lipid-transfer protein 2-like [Malus domestica][more]
gi|224079367|ref|XP_002305838.1|9.4e-2050.00hypothetical protein POPTR_0004s09510g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g15310.1Cp4.1LG03g15310.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 18..101
score: 1.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 38..103
score: 5.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 37..103
score: 8.17
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 37..103
score: 6.2
NoneNo IPR availablePANTHERPTHR33214FAMILY NOT NAMEDcoord: 10..103
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g15310Cucumber (Gy14) v2cgybcpeB554
Cp4.1LG03g15310Melon (DHL92) v3.6.1cpemedB700
Cp4.1LG03g15310Silver-seed gourdcarcpeB0455
Cp4.1LG03g15310Wax gourdcpewgoB0776
Cp4.1LG03g15310Cucurbita pepo (Zucchini)cpecpeB450
Cp4.1LG03g15310Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g15310Cucurbita maxima (Rimu)cmacpeB495
Cp4.1LG03g15310Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g15310Cucurbita moschata (Rifu)cmocpeB454
Cp4.1LG03g15310Wild cucumber (PI 183967)cpecpiB619
Cp4.1LG03g15310Cucumber (Chinese Long) v2cpecuB617
Cp4.1LG03g15310Bottle gourd (USVL1VR-Ls)cpelsiB517
Cp4.1LG03g15310Watermelon (Charleston Gray)cpewcgB573
Cp4.1LG03g15310Watermelon (97103) v1cpewmB603
Cp4.1LG03g15310Melon (DHL92) v3.5.1cpemeB590