Cp4.1LG03g13720 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTGTAGAGAGTCATTGTGAGTTAGAATCTGAGAGTTTTGTTTGTTTGTGTTTCTAGAGAAGTGCAGAGGGCGACGCATGCAATTAAAATCTCCAACTTCATCTCCCCCACTTGCCAACTAAATTCCACCATCCATTTTCAAAAGAAATACCCAAAATAAACACCTTCTGCCGGCGTCCATTTCTCCTTCCGCCACCCATGTCTTCCATTCTTACCTCTCAAGGTCTCGTCATTGCCACTGCCATGGTCGTCTCCTCCACGGCTCTCTTCCTCGCCTTCTCCAACCACCACAAGATCAATCCACTCCCTTCCAAATCACTTCTTTCTTCCTGCTTTTCCTCTGGTAAATTCCTTCCCTTTTCTTCAATCATGTTTTGAACGTTAAAAAGCTGAAATCTTGATGGGTTTTTGATGTTGAATTAACTTAAAATTTGATGGGTTTTTGTAAAGTTTGTGTTTTTAGTGTTGTTTTGAGGATTTGGGGCTGAAATTTTGGTGGGTTTTTGATGTTTTTGTGTTTAGACAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAGATTTGCAGAGGATGTGAAGGAGCCAAAAGGGAATGGAGAAGAGTACAGAAGAGAGCACGATGAGAGATTGGCTATGGCGGAAAGAAGAAGAAGAACAAGAACAAGTAGCAGCTGCTGTAGAAATGAAATTCCTGCAAATCGTGTTGCTTTGTATAATGGAATTCTTAAACAACGATCGCTAAGAACCCAATGTTCATTTTGATCAAAACTCTCTGTTTTTACCCTTTTTCTTTCTTCGTTTCTCTCTTCTTTTCTCTGTTTCAGGAAAAAAAAAAAAAAAAGTGTGAAAAATCTAGCTTTTCTGTGGCTGTAGATGGACGGTTGAGATTCAGTCCCACCCACCCACTTTTTTTTTTTTTTTTTTTTTT TATTGTAGAGAGTCATTGTGAGTTAGAATCTGAGAGTTTTGTTTGTTTGTGTTTCTAGAGAAGTGCAGAGGGCGACGCATGCAATTAAAATCTCCAACTTCATCTCCCCCACTTGCCAACTAAATTCCACCATCCATTTTCAAAAGAAATACCCAAAATAAACACCTTCTGCCGGCGTCCATTTCTCCTTCCGCCACCCATGTCTTCCATTCTTACCTCTCAAGGTCTCGTCATTGCCACTGCCATGGTCGTCTCCTCCACGGCTCTCTTCCTCGCCTTCTCCAACCACCACAAGATCAATCCACTCCCTTCCAAATCACTTCTTTCTTCCTGCTTTTCCTCTGACAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAGATTTGCAGAGGATGTGAAGGAGCCAAAAGGGAATGGAGAAGAGTACAGAAGAGAGCACGATGAGAGATTGGCTATGGCGGAAAGAAGAAGAAGAACAAGAACAAGTAGCAGCTGCTGTAGAAATGAAATTCCTGCAAATCGTGTTGCTTTGTATAATGGAATTCTTAAACAACGATCGCTAAGAACCCAATGTTCATTTTGATCAAAACTCTCTGTTTTTACCCTTTTTCTTTCTTCGTTTCTCTCTTCTTTTCTCTGTTTCAGGAAAAAAAAAAAAAAAAGTGTGAAAAATCTAGCTTTTCTGTGGCTGTAGATGGACGGTTGAGATTCAGTCCCACCCACCCACTTTTTTTTTTTTTTTTTTTTTT ATGTCTTCCATTCTTACCTCTCAAGGTCTCGTCATTGCCACTGCCATGGTCGTCTCCTCCACGGCTCTCTTCCTCGCCTTCTCCAACCACCACAAGATCAATCCACTCCCTTCCAAATCACTTCTTTCTTCCTGCTTTTCCTCTGACAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAGATTTGCAGAGGATGTGAAGGAGCCAAAAGGGAATGGAGAAGAGTACAGAAGAGAGCACGATGAGAGATTGGCTATGGCGGAAAGAAGAAGAAGAACAAGAACAAGTAGCAGCTGCTGTAGAAATGAAATTCCTGCAAATCGTGTTGCTTTGTATAATGGAATTCTTAAACAACGATCGCTAAGAACCCAATGTTCATTTTGA MSSILTSQGLVIATAMVVSSTALFLAFSNHHKINPLPSKSLLSSCFSSDKKKKKKKKKKKVRFAEDVKEPKGNGEEYRREHDERLAMAERRRRTRTSSSCCRNEIPANRVALYNGILKQRSLRTQCSF
BLAST of Cp4.1LG03g13720 vs. TrEMBL
Match: A0A0A0KVF6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G004980 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 5.6e-37 Identity = 97/134 (72.39%), Postives = 108/134 (80.60%), Query Frame = 1
BLAST of Cp4.1LG03g13720 vs. TrEMBL
Match: A0A078DKZ1_BRANA (BnaC06g09800D protein OS=Brassica napus GN=BnaC06g09800D PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 3.2e-24 Identity = 71/125 (56.80%), Postives = 88/125 (70.40%), Query Frame = 1
BLAST of Cp4.1LG03g13720 vs. TrEMBL
Match: A0A0D3CRB6_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 3.2e-24 Identity = 71/125 (56.80%), Postives = 88/125 (70.40%), Query Frame = 1
BLAST of Cp4.1LG03g13720 vs. TrEMBL
Match: B9RV57_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0899530 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.5e-24 Identity = 78/141 (55.32%), Postives = 97/141 (68.79%), Query Frame = 1
BLAST of Cp4.1LG03g13720 vs. TrEMBL
Match: A0A0B0MLS2_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28143 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 9.3e-24 Identity = 74/130 (56.92%), Postives = 93/130 (71.54%), Query Frame = 1
BLAST of Cp4.1LG03g13720 vs. TAIR10
Match: AT1G52565.1 (AT1G52565.1 unknown protein) HSP 1 Score: 113.2 bits (282), Expect = 1.2e-25 Identity = 72/130 (55.38%), Postives = 95/130 (73.08%), Query Frame = 1
BLAST of Cp4.1LG03g13720 vs. TAIR10
Match: AT3G15760.1 (AT3G15760.1 unknown protein) HSP 1 Score: 89.0 bits (219), Expect = 2.4e-18 Identity = 63/127 (49.61%), Postives = 84/127 (66.14%), Query Frame = 1
BLAST of Cp4.1LG03g13720 vs. NCBI nr
Match: gi|659108511|ref|XP_008454240.1| (PREDICTED: uncharacterized protein LOC103494703 [Cucumis melo]) HSP 1 Score: 169.1 bits (427), Expect = 5.1e-39 Identity = 102/132 (77.27%), Postives = 112/132 (84.85%), Query Frame = 1
BLAST of Cp4.1LG03g13720 vs. NCBI nr
Match: gi|778689527|ref|XP_011652971.1| (PREDICTED: uncharacterized protein LOC101211217 [Cucumis sativus]) HSP 1 Score: 161.8 bits (408), Expect = 8.1e-37 Identity = 97/134 (72.39%), Postives = 108/134 (80.60%), Query Frame = 1
BLAST of Cp4.1LG03g13720 vs. NCBI nr
Match: gi|922508038|ref|XP_013590546.1| (PREDICTED: uncharacterized protein LOC106298964 [Brassica oleracea var. oleracea]) HSP 1 Score: 119.4 bits (298), Expect = 4.6e-24 Identity = 71/125 (56.80%), Postives = 88/125 (70.40%), Query Frame = 1
BLAST of Cp4.1LG03g13720 vs. NCBI nr
Match: gi|255553167|ref|XP_002517626.1| (PREDICTED: uncharacterized protein LOC8282327 [Ricinus communis]) HSP 1 Score: 118.6 bits (296), Expect = 7.9e-24 Identity = 78/141 (55.32%), Postives = 97/141 (68.79%), Query Frame = 1
BLAST of Cp4.1LG03g13720 vs. NCBI nr
Match: gi|728819176|gb|KHG03083.1| (hypothetical protein F383_28143 [Gossypium arboreum]) HSP 1 Score: 117.9 bits (294), Expect = 1.3e-23 Identity = 74/130 (56.92%), Postives = 93/130 (71.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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