Cp4.1LG03g13700 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g13700
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPectin lyase-like superfamily protein
LocationCp4.1LG03 : 9286005 .. 9287902 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGCAGATAGGTTTTTTGGTGGTGTTAGTACTCGTGATTTGCTTGATATTTGGATTAAAAACTCTTCACCATCATCCACAAGGCAATAATGATCCAAAAGGCAACGATGGTAGTCCTAATGTAGAGTATAAGAACATCGATGTGGTTCATTATGGGGCAGCTGGGGATGGAAAAACAGATGATTCACAAGTAAATATACTCACTCAAACCTTCAAATTATGCATCTAAAGCTATTGTTTTCTAATATGATTCATTGTTTAAAGGCATTTTTGAAGGCTTGGATGGCTGTTTGTAAGGCTACAACGCCCTCAGCTATGTTGGTGCCATCTTCCAAGACATTCTTGTTGAATCCAGTGAAGTTTGAAGGCCCATGCATGTCCTCCAATGTCGGGGTTAAAGTAATTAGCCTTTTCCTAGCTTTGCTTTACGTTATGTTCATATGGTTATTATGGTAACTTACTTGGGATGTGTAGATCCTTGGAAAGGTTGTGGCTCCAACTGATGTTGATGATTGGAAAGAGTTTAAGGTCAAGAATTGGTTGTGGTTCGCCAATGTGAGCGGTCTTGATATACATGGGAATGGCCAAATTGATGGGCAAGGAGCTGGTTGGTGGAATCAAAAATCAAATGGACGACCCACGGTTCGTTACGATCGTCGTACCAAATGTTACTTACGTTTATGTGGGAGTGTTTCAATTGAATATGTATTGTGATTACAGGCGTTGGCTGTTTACGATTGTGATAATCTTCGTCTTTCTGGATTAACGCATATTAATAGTCCTAAAAGTCATATGCATATTGTTCGTTGCAATCATGCTTCCATCTCTCAATTGAACATACTAGCACCCGAGGATAGTCCCAATACTGATGGTATTGATGTTGCTTATTCAACCGATGTTAAGATTCAGAATTGCAGTATTGCAACAGGTAGTGCAATCCCAGTATATATTAACTCAGTTAGGTTTGTTGAGGATTGTCGGGAGGGAGTCCCACGTTGGCTGATCTCCATTGGTATGAGGCTTTTGGGGAAACCAAAAGCAAAGCCATGAGAGCTTATGGCTCAAAATGGACAATATCATACTATTGTGGAGAGTCGTGATTCCAGAACTGATTTTTCAATTGTATCTACTATAACAGGTGATGATTGTATTGCTATTAGTGAAGGCTCTTCCAATATCCACATAACAAACATCGAGTGTGGACCTGGTCATGGCATAAGGTTTAATCACTTAAAAACTACTAAATGTTGCTTTTTTCTCGAGGAAACGTCTTGCTTAAAAAGGCTATTTGTTTCAGTATTGGTAGCTTGGGAGAAGACGGGGCGACATCCGCTGTAGAAGAAGTGAGAGTTCAAGATTGTCATCTGAAAGGAACTATGTATGGAGCAAGGATCAAAACATGGCAGGTTAATACTAAATCTTGATTTGATGATGTCTTAAAACACGAAGAATTGTGTTCATGTCTCTTCTTCAATATAGGGAGGATCTGGATACGCAAGAAAGATATCGTTTCGAGGAATCACACTAGATCAAGTTCGCAACCCAATCATAATCAACCAGTATTACTGCAACGGAAAAAAAGATTGCAAAAACGAGGTAGATTCAAGAAACATTGCCCGTAATCTAGATATACAAAAGGTAAACTAACATACGAGGAAAATGTTGCAGACATCAGCTGTAGAAGTGAGTGATGTGTTGTACCAAGGATTGCGTGGAACATCTACAACGAAGGTGGCAGTGAAATTGAGTTGCAGTGAGAGTATAGGCTGCAAGAACCTTGCATTTGAAGATATCGATATCAAATCTACAGATTCTGATAAAACCACCCAGTCCTCATGTTCTAATGCCCATGGAACATCAACAAATACAGTTCCTACTATCGATTGTTTGTTACCATAG

mRNA sequence

TTGCAGATAGGTTTTTTGGTGGTGTTAGTACTCGTGATTTGCTTGATATTTGGATTAAAAACTCTTCACCATCATCCACAAGGCAATAATGATCCAAAAGGCAACGATGGTAGTCCTAATGTAGAGTATAAGAACATCGATGTGGTTCATTATGGGGCAGCTGGGGATGGAAAAACAGATGATTCACAAGCATTTTTGAAGGCTTGGATGGCTGTTTGTAAGGCTACAACGCCCTCAGCTATGTTGGTGCCATCTTCCAAGACATTCTTGTTGAATCCAGTGAAGTTTGAAGGCCCATGCATGTCCTCCAATGTCGGGGTTAAAATCCTTGGAAAGGTTGTGGCTCCAACTGATGTTGATGATTGGAAAGAGTTTAAGGTCAAGAATTGGTTGTGGTTCGCCAATGTGAGCGGTCTTGATATACATGGGAATGGCCAAATTGATGGGCAAGGAGCTGGTTGGTGGAATCAAAAATCAAATGGACGACCCACGGCGTTGGCTGTTTACGATTGTGATAATCTTCGTCTTTCTGGATTAACGCATATTAATAGTCCTAAAAGTCATATGCATATTGTTCGTTGCAATCATGCTTCCATCTCTCAATTGAACATACTAGCACCCGAGGATAGTCCCAATACTGATGGTATTGATGTTGCTTATTCAACCGATGTTAAGATTCAGAATTGCAGCTCTTCCAATATCCACATAACAAACATCGAGTGTGGACCTGGTCATGGCATAAGTATTGGTAGCTTGGGAGAAGACGGGGCGACATCCGCTGTAGAAGAAGTGAGAGTTCAAGATTGTCATCTGAAAGGAACTATGTATGGAGCAAGGATCAAAACATGGCAGGGAGGATCTGGATACGCAAGAAAGATATCGTTTCGAGGAATCACACTAGATCAAGTTCGCAACCCAATCATAATCAACCAGTATTACTGCAACGGAAAAAAAGATTGCAAAAACGAGACATCAGCTGTAGAAGTGAGTGATGTGTTGTACCAAGGATTGCGTGGAACATCTACAACGAAGGTGGCAGTGAAATTGAGTTGCAGTGAGAGTATAGGCTGCAAGAACCTTGCATTTGAAGATATCGATATCAAATCTACAGATTCTGATAAAACCACCCAGTCCTCATGTTCTAATGCCCATGGAACATCAACAAATACAGTTCCTACTATCGATTGTTTGTTACCATAG

Coding sequence (CDS)

TTGCAGATAGGTTTTTTGGTGGTGTTAGTACTCGTGATTTGCTTGATATTTGGATTAAAAACTCTTCACCATCATCCACAAGGCAATAATGATCCAAAAGGCAACGATGGTAGTCCTAATGTAGAGTATAAGAACATCGATGTGGTTCATTATGGGGCAGCTGGGGATGGAAAAACAGATGATTCACAAGCATTTTTGAAGGCTTGGATGGCTGTTTGTAAGGCTACAACGCCCTCAGCTATGTTGGTGCCATCTTCCAAGACATTCTTGTTGAATCCAGTGAAGTTTGAAGGCCCATGCATGTCCTCCAATGTCGGGGTTAAAATCCTTGGAAAGGTTGTGGCTCCAACTGATGTTGATGATTGGAAAGAGTTTAAGGTCAAGAATTGGTTGTGGTTCGCCAATGTGAGCGGTCTTGATATACATGGGAATGGCCAAATTGATGGGCAAGGAGCTGGTTGGTGGAATCAAAAATCAAATGGACGACCCACGGCGTTGGCTGTTTACGATTGTGATAATCTTCGTCTTTCTGGATTAACGCATATTAATAGTCCTAAAAGTCATATGCATATTGTTCGTTGCAATCATGCTTCCATCTCTCAATTGAACATACTAGCACCCGAGGATAGTCCCAATACTGATGGTATTGATGTTGCTTATTCAACCGATGTTAAGATTCAGAATTGCAGCTCTTCCAATATCCACATAACAAACATCGAGTGTGGACCTGGTCATGGCATAAGTATTGGTAGCTTGGGAGAAGACGGGGCGACATCCGCTGTAGAAGAAGTGAGAGTTCAAGATTGTCATCTGAAAGGAACTATGTATGGAGCAAGGATCAAAACATGGCAGGGAGGATCTGGATACGCAAGAAAGATATCGTTTCGAGGAATCACACTAGATCAAGTTCGCAACCCAATCATAATCAACCAGTATTACTGCAACGGAAAAAAAGATTGCAAAAACGAGACATCAGCTGTAGAAGTGAGTGATGTGTTGTACCAAGGATTGCGTGGAACATCTACAACGAAGGTGGCAGTGAAATTGAGTTGCAGTGAGAGTATAGGCTGCAAGAACCTTGCATTTGAAGATATCGATATCAAATCTACAGATTCTGATAAAACCACCCAGTCCTCATGTTCTAATGCCCATGGAACATCAACAAATACAGTTCCTACTATCGATTGTTTGTTACCATAG

Protein sequence

LQIGFLVVLVLVICLIFGLKTLHHHPQGNNDPKGNDGSPNVEYKNIDVVHYGAAGDGKTDDSQAFLKAWMAVCKATTPSAMLVPSSKTFLLNPVKFEGPCMSSNVGVKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNQKSNGRPTALAVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGIDVAYSTDVKIQNCSSSNIHITNIECGPGHGISIGSLGEDGATSAVEEVRVQDCHLKGTMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQYYCNGKKDCKNETSAVEVSDVLYQGLRGTSTTKVAVKLSCSESIGCKNLAFEDIDIKSTDSDKTTQSSCSNAHGTSTNTVPTIDCLLP
Homology
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BLAST of Cp4.1LG03g13700 vs. Swiss-Prot
Match: PGLR3_ARATH (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 1.5e-102
Identity = 193/369 (52.30%), Postives = 249/369 (67.48%), Query Frame = 1 

Query: 46  IDVVHYGAAGDGKTDDSQAFLKAWMAVCKATTPSAMLVPSSKTFLLNPVKFEGPCMSSNV 105
           +DV  +GA GDG TDDSQAFLKAW AVC  T     +VP+  TF+L P+KF+G C S+ V
Sbjct: 24  LDVTQFGAVGDGVTDDSQAFLKAWEAVCSGTGDGQFVVPAGMTFMLQPLKFQGSCKSTPV 83

Query: 106 GVKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNQKSNGRPTA 165
            V++LGK+VAP+   +WK  K   W+ F ++ GL I G+G+I+GQG+ WW  K + RPTA
Sbjct: 84  FVQMLGKLVAPSK-GNWKGDK-DQWILFTDIEGLVIEGDGEINGQGSSWWEHKGS-RPTA 143

Query: 166 LAVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGIDVAYSTDVK 225
           L    C+NLRLSGLTH++SP +H+HI  CN+ +IS L I APE SPNTDGIDV  S++V 
Sbjct: 144 LKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVV 203

Query: 226 IQNC-------------SSSNIHITNIECGPGHGISIGSLGEDGATSAVEEVRVQDCHLK 285
           IQ+C              +SNIHI+ I+CGPGHGISIGSLG+DG T+ VE V VQ+C+ +
Sbjct: 204 IQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSLGKDGETATVENVCVQNCNFR 263

Query: 286 GTMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQYYCNGKKDCKNE--TSAVEVS 345
           GTM GARIKTWQGGSGYAR I+F GITLD V NPIII+Q+Y  G  D   +  +SAVEVS
Sbjct: 264 GTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVS 323

Query: 346 DVLYQGLRGTSTTKVAVKLSCSESIGCKNLAFEDIDIK--STDSDKTTQSSCSNAHGTST 398
            V++    GTS ++  V   CSE + C  +   D+ I+  S+ S +  Q  C N  G ST
Sbjct: 324 KVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLRDMKIETASSGSGQVAQGQCLNVRGAST 383

[Close]
BLAST of Cp4.1LG03g13700 vs. Swiss-Prot
Match: PGLR5_ARATH (Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana GN=At1g80170 PE=1 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 3.7e-80
Identity = 148/373 (39.68%), Postives = 221/373 (59.25%), Query Frame = 1 

Query: 46  IDVVHYGAAGDGKTDDSQAFLKAWMAVCKATTPSAMLVPSSKTFLLNPVKFEGPCMSSNV 105
           + V ++GA G+G TDD++AF  AW   C +   + +LVP + T LL P+   GPC  + +
Sbjct: 53  LHVGNFGAKGNGVTDDTKAFADAWKTACSSKVKTRILVPENYTCLLRPIDLSGPC-KARL 112

Query: 106 GVKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNQKSN----- 165
            ++I G ++AP D D W+    + WL+F  +S L + G G ++G G  WW +        
Sbjct: 113 TLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWERSCKHNHSN 172

Query: 166 ---GRPTALAVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGID 225
              G PTAL  + C N+R+  L  I+S + H+ +  C   +IS L ++AP  SPNTDGI 
Sbjct: 173 PCRGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIH 232

Query: 226 VAYSTDVKIQNCS-------------SSNIHITNIECGPGHGISIGSLGEDGATSAVEEV 285
           ++ S  + I N +             S+ I I+NI CGPGHGISIGSLG+  +   V ++
Sbjct: 233 ISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSKSWEEVRDI 292

Query: 286 RVQDCHLKGTMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQYYCNGKKDCKNET 345
            V    +  T  G RIKTWQGGSG   KI FR I ++ V NPIII+QYYC+ +K C N+T
Sbjct: 293 TVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQT 352

Query: 346 SAVEVSDVLYQGLRGTSTTKVAVKLSCSESIGCKNLAFEDIDIKSTDSDKTTQSSCSNAH 398
           SA+ + ++ +  +RGTS +K A+K+SCS+S  C+N+  +DID++ ++ D  T+S C  A+
Sbjct: 353 SAISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDIDLEPSNGDGFTESFCWEAY 412

[Close]
BLAST of Cp4.1LG03g13700 vs. Swiss-Prot
Match: QRT2_ARATH (Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2)

HSP 1 Score: 271.9 bits (694), Expect = 1.1e-71
Identity = 147/382 (38.48%), Postives = 219/382 (57.33%), Query Frame = 1 

Query: 23  HHHPQGNNDPKGNDG-SPNVEYKNIDVVHYGAAGDGKTDDSQAFLKAWMAVCKATTPSAM 82
           H H   N+  K   G +P    ++ +V  +GA  +G  DDS+AF+KAW A C +T    +
Sbjct: 47  HGHNTRNSHLKNRHGYAPRSSPRSFNVNTFGAKANGN-DDSKAFMKAWEAACSSTGIVYI 106

Query: 83  LVPSSKTFLLNPVKFEGPCMSSNVGVKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDI 142
           + P ++ ++L  V F GPC SS +  KI G++ A  +  D+KE +  +W+ F NV+ L +
Sbjct: 107 VAPKNRDYMLKAVTFSGPCKSSLIIFKIYGRIEAWENPSDYKERR--HWIVFENVNNLRV 166

Query: 143 HGNGQIDGQGAGWWNQKSN--------GRPTALAVYDCDNLRLSGLTHINSPKSHMHIVR 202
            G G+IDG G  WW +           G PTA+   +C+NLR+S +   N+ + H+    
Sbjct: 167 EGGGRIDGNGHIWWPKSCKINPQLPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQD 226

Query: 203 CNHASISQLNILAPEDSPNTDGIDVAYSTDVKIQNC-------------SSSNIHITNIE 262
           C +     L + +P DSPNTDGI V+ + ++ IQ+               S N+  T I 
Sbjct: 227 CKNVKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIVRTGDDCISIVSGSENVRATGIT 286

Query: 263 CGPGHGISIGSLGEDGATSAVEEVRVQDCHLKGTMYGARIKTWQGGSGYARKISFRGITL 322
           CGPGHGISIGSLGED + + V  V V    L GT  G RIKTWQGG G A+ I F+ I +
Sbjct: 287 CGPGHGISIGSLGEDNSEAYVSNVVVNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIM 346

Query: 323 DQVRNPIIINQYYCNGKKDCKNETSAVEVSDVLYQGLRGTSTTKVAVKLSCSESIGCKNL 382
             V NPIIINQ YC+  + C  + SAV+VS+VLY+ ++GTS+  +AVK  CS++I C+ +
Sbjct: 347 KNVTNPIIINQDYCDRVEACPEQKSAVQVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGI 406

[Close]
BLAST of Cp4.1LG03g13700 vs. Swiss-Prot
Match: PGLR_PERAE (Polygalacturonase OS=Persea americana PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 3.9e-69
Identity = 151/374 (40.37%), Postives = 207/374 (55.35%), Query Frame = 1 

Query: 30  NDPKGNDGSPNVEYKNIDVVHYGAAGDGKTDDSQAFLKAWMAVCKATTPSAMLVPSSKTF 89
           N   G + SP+ +   I V  +GA GDG TDD++AF KAW   C  ++ S ++VP +K +
Sbjct: 72  NPVGGPETSPDTD---ISVDDFGARGDG-TDDTKAFEKAWKDAC--SSGSVLIVPENKNY 131

Query: 90  LLNPVKFEGPCMSSNVGVKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDG 149
           LL  + F GPC  S++ VKI G + A +D  DW     K W+ F ++S L + G G  +G
Sbjct: 132 LLKQITFSGPC-KSDLRVKIRGTIEASSDQSDWVGHNRKRWIEFEDISNLTLEGGGTSNG 191

Query: 150 QGAGWWNQKSNGR--------PTALAVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQ 209
            G  WW+     +        PTAL    C NL +S L+  +S K H+   +C     S 
Sbjct: 192 NGETWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIASN 251

Query: 210 LNILAPEDSPNTDGIDVAYSTDVKIQNC-------------SSSNIHITNIECGPGHGIS 269
           L + APE SPNTDGI +  +  + + N               S  +  TNI CGPGHGIS
Sbjct: 252 LMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESGSKMVIATNITCGPGHGIS 311

Query: 270 IGSLGEDGATSAVEEVRVQDCHLKGTMYGARIKTWQGGSGYARKISFRGITLDQVRNPII 329
           IGSLG+  + + V  V V   +L  T  G RIKTWQGGSG A+ I F+ I +  V NPII
Sbjct: 312 IGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGSGSAKNIKFQNIVMHNVTNPII 371

Query: 330 INQYYCNGKKDCKNETSAVEVSDVLYQGLRGTSTTKVAVKLSCSESIGCKNLAFEDIDIK 383
           I+QYYC+ K  C  + SAV+VS+V Y  +RGTS ++VAVK  CS+S  C+     +I++ 
Sbjct: 372 IDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSASEVAVKFDCSKSSPCQGYIVGNINLV 431

[Close]
BLAST of Cp4.1LG03g13700 vs. Swiss-Prot
Match: PGLR2_JUNAS (Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 5.0e-69
Identity = 146/378 (38.62%), Postives = 208/378 (55.03%), Query Frame = 1 

Query: 47  DVVHYGAAGDGKTDDSQAFLKAWMAVCKATTPSAMLVPSSKTFLLNPVKFEGPCMSSNVG 106
           +V HYGA GDGK D + AF K W A C   + +  LVP++K F++N + F GPC   +  
Sbjct: 61  NVEHYGAVGDGKHDSTDAFEKTWNAACNKLS-AVFLVPANKKFVVNNLVFYGPCQP-HFS 120

Query: 107 VKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNQK-------- 166
            K+ G + A  D   WK  K+  W+ FA ++  ++ G G IDGQG  WW+ +        
Sbjct: 121 FKVDGTIAAYPDPAKWKNSKI--WMHFARLTDFNLMGTGVIDGQGNRWWSDQCKTINGRT 180

Query: 167 ---SNGRPTALAVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQLNILAPEDSPNTDG 226
                GRPTA+ +    ++ +  LT  NSP+ H+    C+   I  + I AP DSPNTDG
Sbjct: 181 VCNDKGRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDG 240

Query: 227 IDVAYSTDVKIQNCS-------------SSNIHITNIECGPGHGISIGSLGEDGATSAVE 286
           ID+  S   +I+ C+             SSNI I ++ CGPGHG+SIGSLG+  + S V 
Sbjct: 241 IDIFASKRFEIEKCTIGTGDDCVAVGTGSSNITIKDLTCGPGHGMSIGSLGKGNSRSEVS 300

Query: 287 EVRVQDCHLKGTMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQYYCNGKKDCKN 346
            V +       T  G RIKTWQGGSG A  I++  + +    NPI+INQ+YC     CKN
Sbjct: 301 FVHLDGAKFIDTQNGLRIKTWQGGSGLASHITYENVEMINAENPILINQFYCTSAAACKN 360

Query: 347 ETSAVEVSDVLYQGLRGTSTTKVAVKLSCSESIGCKNLAFEDIDIKSTDSDKTTQSSCSN 400
           + SAV++ DV ++ + GTS T  A++L CS+S+ C N+   ++ +K T S K       N
Sbjct: 361 QRSAVKIQDVTFKNIHGTSATTAAIQLMCSDSVPCSNIKLSNVFLKLT-SGKVATCVNKN 420

[Close]
BLAST of Cp4.1LG03g13700 vs. TrEMBL
Match: A0A0A0KTD6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G004940 PE=3 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 8.4e-172
Identity = 293/412 (71.12%), Postives = 346/412 (83.98%), Query Frame = 1 

Query: 1   LQIGFLVVLVLVICLIFGLKTLHHHPQGNNDPKGNDGSPNVEYKNIDVVHYGAAGDGKTD 60
           L  GF+V +V+ IC+IF L+  HHHP+ N DP  ND      +K IDV+ YGAAGDGKTD
Sbjct: 5   LMAGFVVAIVIGICVIFALRK-HHHPESNADPNNND-PVITNFKAIDVIQYGAAGDGKTD 64

Query: 61  DSQAFLKAWMAVCKATTPSAMLVPSSKTFLLNPVKFEGPCMSSNVGVKILGKVVAPTDVD 120
           DS+AFLKAW AVC+A TPSAMLVPS+KTFLLNPV+F+GPCMSS+VGV+ILGK+VAP+D+D
Sbjct: 65  DSRAFLKAWKAVCEANTPSAMLVPSTKTFLLNPVQFQGPCMSSSVGVQILGKIVAPSDLD 124

Query: 121 DWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNQKSNGRPTALAVYDCDNLRLSGLT 180
            WK F  KNWL F+NVS L I GNG+IDGQGA WW++ S+G+PTALA+YDCD L LSGLT
Sbjct: 125 AWKVFDAKNWLLFSNVSRLVIQGNGEIDGQGAAWWDRDSDGKPTALAIYDCDGLHLSGLT 184

Query: 181 HINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGIDVAYSTDVKIQNCS---------- 240
           H NSP+SHMHIVRCNHASIS+LNI+APE+SPNTDGIDVA+S+ VKI NC+          
Sbjct: 185 HSNSPQSHMHIVRCNHASISKLNIVAPENSPNTDGIDVAHSSHVKIHNCNIGTGDDCIAI 244

Query: 241 ---SSNIHITNIECGPGHGISIGSLGEDGATSAVEEVRVQDCHLKGTMYGARIKTWQGGS 300
              +SNIHI NI+CGPGHGISIGSLG+DG +S+VE+VRVQ+CHLKGTMYGARIKTWQGG+
Sbjct: 245 SEGTSNIHIANIQCGPGHGISIGSLGKDGTSSSVEDVRVQNCHLKGTMYGARIKTWQGGA 304

Query: 301 GYARKISFRGITLDQVRNPIIINQYYCNGKKDCKNETSAVEVSDVLYQGLRGTSTTKVAV 360
           GYARKISF+GITLDQV  PI+I+QYYCNGK DCKN+TSAVEVSDVLYQGL GTS T+VAV
Sbjct: 305 GYARKISFQGITLDQVHKPILIDQYYCNGKTDCKNQTSAVEVSDVLYQGLHGTSATEVAV 364

Query: 361 KLSCSESIGCKNLAFEDIDIKSTDSDKTTQSSCSNAHGTSTNTVPTIDCLLP 400
           +LSCSE++GC+N+  EDIDI+  DSDK  QSSC +AHGTSTNT P +DCL P
Sbjct: 365 ELSCSETVGCRNIVLEDIDIRYADSDKIAQSSCDDAHGTSTNTFPAVDCLKP 414

[Close]
BLAST of Cp4.1LG03g13700 vs. TrEMBL
Match: A0A067E2X4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041224mg PE=3 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 2.7e-114
Identity = 205/370 (55.41%), Postives = 270/370 (72.97%), Query Frame = 1 

Query: 45  NIDVVHYGAAGDGKTDDSQAFLKAWMAVCKATTPSA-MLVPSSKTFLLNPVKFEGPCMSS 104
           ++ V+ +GA GDG+TDDSQAFLKAW ++C + + +A +LVP+ KTFLLNPV F+GPC SS
Sbjct: 32  SVSVIQFGAVGDGETDDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPVSFQGPCKSS 91

Query: 105 NVGVKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNQKSNGRP 164
           ++ V+I G +VAP     W     K WL F+NV+GL ++GNG+IDG+GA WW+ K N RP
Sbjct: 92  SINVQIQGNIVAPHS-SAWDGHDKKKWLLFSNVNGLTVNGNGKIDGKGASWWSNKQNQRP 151

Query: 165 TALAVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGIDVAYSTD 224
           TAL+   C+NL   GLTH++SP +H+ +  CN  SIS L I+APE SPNTDGID+ +S++
Sbjct: 152 TALSFGSCNNLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPESSPNTDGIDITHSSN 211

Query: 225 VKIQNCS-------------SSNIHITNIECGPGHGISIGSLGEDGATSAVEEVRVQDCH 284
           V+I++C+             +SNI +T + CGPGHGISIGSLG +G TS VE+V V+DC 
Sbjct: 212 VQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPGHGISIGSLGANGGTSIVEDVHVRDCT 271

Query: 285 LKGTMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQYYCNGKKDCKNETSAVEVS 344
            KGT  GARIKTWQGGSG+AR+ISF  I L+   NPIII+QYYC    DCKN+TSAV+VS
Sbjct: 272 FKGTKNGARIKTWQGGSGHARRISFERIRLESSDNPIIIDQYYCGPNGDCKNQTSAVKVS 331

Query: 345 DVLYQGLRGTSTTKVAVKLSCSESIGCKNLAFEDIDIKSTDSDKTTQSSCSNAHG-TSTN 400
           DV Y G +GTS+T+ AV+LSCSES+GC ++   +IDI  +DS K T++SC NAHG     
Sbjct: 332 DVSYIGFQGTSSTEEAVQLSCSESVGCTDIKINNIDITHSDSGKDTRASCINAHGELYGQ 391

[Close]
BLAST of Cp4.1LG03g13700 vs. TrEMBL
Match: V4SNJ3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027074mg PE=3 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 6.8e-113
Identity = 204/371 (54.99%), Postives = 268/371 (72.24%), Query Frame = 1 

Query: 45  NIDVVHYGAAGDGKTDDSQAFLKAWMAVC--KATTPSAMLVPSSKTFLLNPVKFEGPCMS 104
           ++ V+ +GA GDG+TDDSQAFLKAW ++C  K+  P  +LVP+ KTFLLNPV F+GPC S
Sbjct: 32  SVSVIQFGAVGDGETDDSQAFLKAWKSICGSKSNAPP-LLVPAGKTFLLNPVSFQGPCKS 91

Query: 105 SNVGVKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNQKSNGR 164
           S++ V+I G +VAP     W     K WL F+NV+GL ++GNG+IDG+GA WW+ K + R
Sbjct: 92  SSINVQIQGNIVAPHS-SAWDGHDKKKWLLFSNVNGLTVNGNGKIDGKGASWWSNKQHQR 151

Query: 165 PTALAVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGIDVAYST 224
           PTAL+   C+NL   GL H++SP +H+ +  CN  SIS L I+APE SPNTDGID+ +S+
Sbjct: 152 PTALSFGSCNNLVFRGLMHVDSPGNHISVYGCNDVSISNLKIIAPESSPNTDGIDITHSS 211

Query: 225 DVKIQNCS-------------SSNIHITNIECGPGHGISIGSLGEDGATSAVEEVRVQDC 284
           +V+I++C+             +SNI +T + CGPGHGISIGSLG +G TS VE+V V+DC
Sbjct: 212 NVQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPGHGISIGSLGANGGTSIVEDVHVRDC 271

Query: 285 HLKGTMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQYYCNGKKDCKNETSAVEV 344
             KGT  GARIKTWQGGSG+AR+ISF  I L+   NPIII+QYYC    +CKN+TSAV+V
Sbjct: 272 TFKGTKNGARIKTWQGGSGHARRISFERIKLESSDNPIIIDQYYCGPNDECKNQTSAVKV 331

Query: 345 SDVLYQGLRGTSTTKVAVKLSCSESIGCKNLAFEDIDIKSTDSDKTTQSSCSNAHG-TST 400
           SDV Y G +GTS+T+ AV+LSCSES+GC ++   DIDI  +DS K T++SC NAHG    
Sbjct: 332 SDVSYIGFQGTSSTEEAVQLSCSESVGCTDIKINDIDITHSDSGKDTRASCINAHGELYG 391

[Close]
BLAST of Cp4.1LG03g13700 vs. TrEMBL
Match: M4CBM5_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 6.6e-100
Identity = 190/371 (51.21%), Postives = 253/371 (68.19%), Query Frame = 1 

Query: 44  KNIDVVHYGAAGDGKTDDSQAFLKAWMAVCKATTPSAMLVPSSKTFLLNPVKFEGPCMSS 103
           K +DV  YGA GDG TDDSQAFLKAW AVC  T    ++VP+  TF+L P+KF+G C S+
Sbjct: 21  KALDVTQYGANGDGVTDDSQAFLKAWEAVCSGTGDGQLIVPAGMTFVLQPLKFQGSCKST 80

Query: 104 NVGVKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNQKSNGRP 163
            + V+ILG +VA +   +W+  K   W+ F+++ GL + GNG I+GQG+ WW  K + RP
Sbjct: 81  PIVVQILGNMVASSR-GNWEGDK-DQWILFSDIEGLVVEGNGVINGQGSSWWEHKGSSRP 140

Query: 164 TALAVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGIDVAYSTD 223
           TAL    C+NLRLSGLTH++S K+H+HI  CN  SIS L I APE SPNTDGIDVA S++
Sbjct: 141 TALKFKSCNNLRLSGLTHVDSAKAHIHINNCNGVSISNLRINAPESSPNTDGIDVAASSN 200

Query: 224 VKIQNC-------------SSSNIHITNIECGPGHGISIGSLGEDGATSAVEEVRVQDCH 283
           V IQ+C              +SNI +  I+CGPGHGISIGSLG+DG T++VE++ VQ+C+
Sbjct: 201 VIIQDCVIATGDDCIAINSGTSNIRVCGIDCGPGHGISIGSLGKDGETASVEDICVQNCN 260

Query: 284 LKGTMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQYYCNG--KKDCKNETSAVE 343
            +GT  GARIKTW GGSGYAR+I+F GITLD V NPIII+Q+Y NG  +K+  +++SAVE
Sbjct: 261 FRGTTNGARIKTWPGGSGYARRITFSGITLDNVENPIIIDQHYNNGGSEKNTDDKSSAVE 320

Query: 344 VSDVLYQGLRGTSTTKVAVKLSCSESIGCKNLAFEDIDIK--STDSDKTTQSSCSNAHGT 398
           VS V+Y    GTS ++  V   CS ++ C  +  +D+ I+  S+ S +  Q  C N  G 
Sbjct: 321 VSKVVYSNFVGTSKSEYGVDFRCSTAVPCTEIFMKDVRIETPSSGSGQVAQGQCLNVRGV 380

[Close]
BLAST of Cp4.1LG03g13700 vs. TrEMBL
Match: A0A078CL99_BRANA (BnaC03g39260D protein OS=Brassica napus GN=BnaC03g39260D PE=3 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.9e-99
Identity = 189/369 (51.22%), Postives = 253/369 (68.56%), Query Frame = 1 

Query: 46  IDVVHYGAAGDGKTDDSQAFLKAWMAVCKATTPSAMLVPSSKTFLLNPVKFEGPCMSSNV 105
           +DV  YGA GDG TDDSQAFLKAW AVC  T    ++VP+  TF+L P+KF+G C S+ +
Sbjct: 24  LDVSQYGAIGDGVTDDSQAFLKAWEAVCIGTGDGQLIVPAGMTFVLQPLKFQGSCKSTPI 83

Query: 106 GVKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNQKSNGRPTA 165
            V+ILG +VA +   +W+  K   W+ F+++ GL + GNG I+GQG+ WW  K + RPTA
Sbjct: 84  VVQILGNMVASSR-GNWEGDK-DQWILFSDIEGLVVEGNGVINGQGSSWWEHKGSSRPTA 143

Query: 166 LAVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGIDVAYSTDVK 225
           L    C+NLRLSGLTH++S K+H+HI  CN  SIS L I APE SPNTDGIDVA S++V 
Sbjct: 144 LKFKSCNNLRLSGLTHVDSAKAHIHINNCNGVSISNLRINAPESSPNTDGIDVAASSNVI 203

Query: 226 IQNC-------------SSSNIHITNIECGPGHGISIGSLGEDGATSAVEEVRVQDCHLK 285
           IQ+C              +SNI ++ I+CGPGHGISIGSLG+DG T++VE++ VQ+C+ +
Sbjct: 204 IQDCVIATGDDCIAINSGTSNIRVSGIDCGPGHGISIGSLGKDGETASVEDICVQNCNFR 263

Query: 286 GTMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQYYCNG--KKDCKNETSAVEVS 345
           GT  GARIKTW GGSGYAR+I+F GITLD V NPIII+Q+Y NG  +K+  +++SAVEVS
Sbjct: 264 GTTNGARIKTWPGGSGYARRITFSGITLDNVENPIIIDQHYNNGGSEKNTDDKSSAVEVS 323

Query: 346 DVLYQGLRGTSTTKVAVKLSCSESIGCKNLAFEDIDIK--STDSDKTTQSSCSNAHGTST 398
            V+Y    GTS ++  V   CS ++ C  +  +D+ I+  S+ S +  Q  C N  G ST
Sbjct: 324 KVVYSNFVGTSKSEYGVDFRCSAAVPCTEIFMKDVRIETPSSGSGQVAQGQCFNVRGVST 383

[Close]
BLAST of Cp4.1LG03g13700 vs. TAIR10
Match: AT3G15720.1 (AT3G15720.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 374.4 bits (960), Expect = 8.7e-104
Identity = 193/369 (52.30%), Postives = 249/369 (67.48%), Query Frame = 1 

Query: 46  IDVVHYGAAGDGKTDDSQAFLKAWMAVCKATTPSAMLVPSSKTFLLNPVKFEGPCMSSNV 105
           +DV  +GA GDG TDDSQAFLKAW AVC  T     +VP+  TF+L P+KF+G C S+ V
Sbjct: 24  LDVTQFGAVGDGVTDDSQAFLKAWEAVCSGTGDGQFVVPAGMTFMLQPLKFQGSCKSTPV 83

Query: 106 GVKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNQKSNGRPTA 165
            V++LGK+VAP+   +WK  K   W+ F ++ GL I G+G+I+GQG+ WW  K + RPTA
Sbjct: 84  FVQMLGKLVAPSK-GNWKGDK-DQWILFTDIEGLVIEGDGEINGQGSSWWEHKGS-RPTA 143

Query: 166 LAVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGIDVAYSTDVK 225
           L    C+NLRLSGLTH++SP +H+HI  CN+ +IS L I APE SPNTDGIDV  S++V 
Sbjct: 144 LKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVV 203

Query: 226 IQNC-------------SSSNIHITNIECGPGHGISIGSLGEDGATSAVEEVRVQDCHLK 285
           IQ+C              +SNIHI+ I+CGPGHGISIGSLG+DG T+ VE V VQ+C+ +
Sbjct: 204 IQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSLGKDGETATVENVCVQNCNFR 263

Query: 286 GTMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQYYCNGKKDCKNE--TSAVEVS 345
           GTM GARIKTWQGGSGYAR I+F GITLD V NPIII+Q+Y  G  D   +  +SAVEVS
Sbjct: 264 GTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVS 323

Query: 346 DVLYQGLRGTSTTKVAVKLSCSESIGCKNLAFEDIDIK--STDSDKTTQSSCSNAHGTST 398
            V++    GTS ++  V   CSE + C  +   D+ I+  S+ S +  Q  C N  G ST
Sbjct: 324 KVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLRDMKIETASSGSGQVAQGQCLNVRGAST 383

[Close]
BLAST of Cp4.1LG03g13700 vs. TAIR10
Match: AT4G35670.1 (AT4G35670.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 322.0 bits (824), Expect = 5.1e-88
Identity = 173/369 (46.88%), Postives = 236/369 (63.96%), Query Frame = 1 

Query: 44  KNIDVVHYGAAGDGKTDDSQAFLKAWMAVCKATTP-SAMLVPSSKTFLLNPVKFEGPCMS 103
           KN +V+++ A GDG+TDDS+AFL+AW A C        +L+PS KTFLL P  F+GPC S
Sbjct: 22  KNYNVLNFDAKGDGQTDDSEAFLQAWTAACGGDGDIKTLLIPSGKTFLLQPTVFQGPCKS 81

Query: 104 SNVGVKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWW--NQKSN 163
           S++ V++ G +VAP+D   W +   + W+ F+ VSGL I G+G ID +G+ +W  N K++
Sbjct: 82  SSIKVQLDGTIVAPSDKFAWSDPISRMWIKFSTVSGLIIVGSGTIDSRGSSFWELNLKAS 141

Query: 164 GRPTALAVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGIDVAY 223
            RPTAL +  CDNLR++G+T I+SPK+H+ I  CN  +IS +N+ APE SPNTDGID++ 
Sbjct: 142 QRPTALHISKCDNLRINGITSIDSPKNHISIKTCNTVAISNINLFAPETSPNTDGIDISD 201

Query: 224 STDVKIQ-------------NCSSSNIHITNIECGPGHGISIGSLGEDGATSAVEEVRVQ 283
           ST++ I              N  SSNI+IT I CGPGHGIS+GSLG  GA + V +V+V 
Sbjct: 202 STNINIFDSTIQTGDDCIAINSGSSNINITGINCGPGHGISVGSLGAGGAEAKVSDVQVT 261

Query: 284 DCHLKGTMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQYYCNGKKDCKNETSAV 343
            C    T  GARIKTW GG GYAR ISF  ITL   +NPIII+Q+Y +  K    E SAV
Sbjct: 262 HCTFNQTTNGARIKTWLGGQGYARNISFTDITLVNTKNPIIIDQHYID--KGRLTEESAV 321

Query: 344 EVSDVLYQGLRGTSTTKVAVKLSCSESIGCKNLAFEDIDIKSTDSDKTTQSSCSNAHGTS 397
            +S+V +   RGTS+ K A+ L CSE+  C ++  + IDI   +  K  + +C    G S
Sbjct: 322 AISNVKFVDFRGTSSNKNAITLKCSETTHCVDVVMDGIDITMANGGK-PKVNCQYVDGES 381

[Close]
BLAST of Cp4.1LG03g13700 vs. TAIR10
Match: AT5G27530.1 (AT5G27530.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 312.8 bits (800), Expect = 3.1e-85
Identity = 160/364 (43.96%), Postives = 233/364 (64.01%), Query Frame = 1 

Query: 47  DVVHYGAAGDGKTDDSQAFLKAWMAVCKATTP-SAMLVPSSKTFLLNPVKFEGPCMSSNV 106
           +V+ +GA GDG+TDDS AFL+AW A C      + + +PS KT+LL P++F+GPC S+++
Sbjct: 54  NVLKFGAEGDGQTDDSNAFLQAWNATCGGEENINTLFIPSGKTYLLQPIEFKGPCKSTSI 113

Query: 107 GVKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNQKSNGRPTA 166
            +++ G +VAP+++  W   K + W+ F+ V GL I G+G I+G+G+ +W         A
Sbjct: 114 KLQLDGIIVAPSNITSWSNPKSQTWISFSGVPGLMIDGSGTINGRGSSFWE--------A 173

Query: 167 LAVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGIDVAYSTDVK 226
           L + +C+NL ++G+T I+SPKSH+ I  C++ +IS++NILAPE+SPNTDGID++YST+V 
Sbjct: 174 LHICNCNNLTINGITSIDSPKSHISIKNCHYVAISKINILAPENSPNTDGIDISYSTNVN 233

Query: 227 IQ-------------NCSSSNIHITNIECGPGHGISIGSLGEDGATSAVEEVRVQDCHLK 286
           I              N  SS+I+IT + CGPGHGIS+GSLG DG  +AV +V V  C   
Sbjct: 234 IFDSTIQTGDDCIAINTGSSSINITQVNCGPGHGISVGSLGADGENAAVSDVYVTQCTFN 293

Query: 287 GTMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQYYCNGKKDCKNETSAVEVSDV 346
            T  GARIKTWQGG GYAR ISF  ITL  V+NPIII+Q Y +       + SAV +S V
Sbjct: 294 KTTNGARIKTWQGGQGYARNISFENITLINVQNPIIIDQQYTDKVLLDATKDSAVAISSV 353

Query: 347 LYQGLRGTSTTKVAVKLSCSESIGCKNLAFEDIDIKSTDSDKTTQSSCSNAHGTSTNTVP 397
            Y G +GT+  + A+ L CS    CK++  +DI++   + +K  +  C N  G S++   
Sbjct: 354 KYVGFQGTTLNEDAIMLKCSAITYCKDMVIDDIEVTMENGEK-PKVECENVEGESSDNDL 408

[Close]
BLAST of Cp4.1LG03g13700 vs. TAIR10
Match: AT1G80170.1 (AT1G80170.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 300.1 bits (767), Expect = 2.1e-81
Identity = 148/373 (39.68%), Postives = 221/373 (59.25%), Query Frame = 1 

Query: 46  IDVVHYGAAGDGKTDDSQAFLKAWMAVCKATTPSAMLVPSSKTFLLNPVKFEGPCMSSNV 105
           + V ++GA G+G TDD++AF  AW   C +   + +LVP + T LL P+   GPC  + +
Sbjct: 53  LHVGNFGAKGNGVTDDTKAFADAWKTACSSKVKTRILVPENYTCLLRPIDLSGPC-KARL 112

Query: 106 GVKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNQKSN----- 165
            ++I G ++AP D D W+    + WL+F  +S L + G G ++G G  WW +        
Sbjct: 113 TLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWERSCKHNHSN 172

Query: 166 ---GRPTALAVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGID 225
              G PTAL  + C N+R+  L  I+S + H+ +  C   +IS L ++AP  SPNTDGI 
Sbjct: 173 PCRGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIH 232

Query: 226 VAYSTDVKIQNCS-------------SSNIHITNIECGPGHGISIGSLGEDGATSAVEEV 285
           ++ S  + I N +             S+ I I+NI CGPGHGISIGSLG+  +   V ++
Sbjct: 233 ISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSKSWEEVRDI 292

Query: 286 RVQDCHLKGTMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQYYCNGKKDCKNET 345
            V    +  T  G RIKTWQGGSG   KI FR I ++ V NPIII+QYYC+ +K C N+T
Sbjct: 293 TVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQT 352

Query: 346 SAVEVSDVLYQGLRGTSTTKVAVKLSCSESIGCKNLAFEDIDIKSTDSDKTTQSSCSNAH 398
           SA+ + ++ +  +RGTS +K A+K+SCS+S  C+N+  +DID++ ++ D  T+S C  A+
Sbjct: 353 SAISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDIDLEPSNGDGFTESFCWEAY 412

[Close]
BLAST of Cp4.1LG03g13700 vs. TAIR10
Match: AT5G44840.1 (AT5G44840.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 293.1 bits (749), Expect = 2.6e-79
Identity = 155/365 (42.47%), Postives = 223/365 (61.10%), Query Frame = 1 

Query: 47  DVVHYGAAGDGKTDDSQAFLKAWMAVCKATTPS-AMLVPSSKTFLLNPVKFEGPCMSSNV 106
           DV+ +GA G+G TDDS+AF+KAW A+C +   S   ++PS+KTFLL P+ F+GPC S +V
Sbjct: 25  DVLEFGADGNGITDDSKAFVKAWSAMCGSGGNSKTFIIPSNKTFLLQPLTFQGPCKSPSV 84

Query: 107 GVKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNQKSNGRPTA 166
            VK  GK+VAP +   W ++K+  W+ F  + GL ++G+G I G+G+ +W Q        
Sbjct: 85  QVKFDGKIVAPINKAAWSDYKLFRWVSFKEIIGLTVNGSGTIHGRGSSFWKQ-------- 144

Query: 167 LAVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGIDVAYSTDVK 226
           L    C++L ++G+T  NSPK+H+ I  C    I+++ ++AP DSPNTDGI+++ S+DV 
Sbjct: 145 LHFQRCNDLMITGITSFNSPKNHISISECKRVKITKIKLVAPHDSPNTDGINISESSDVD 204

Query: 227 IQ-------------NCSSSNIHITNIECGPGHGISIGSLGEDGATSAVEEVRVQDCHLK 286
           I              N  S NI+I  + CGPGHGIS+GS+G DG  S VE V+V +C   
Sbjct: 205 IYDTVIGTGDDCVAINSGSMNINIARMNCGPGHGISVGSVGRDGEESIVENVQVTNCTFI 264

Query: 287 GTMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQYYCN-GKKDCKNETSAVEVSD 346
            T  GARIKTW  G GYA+ I F+ +T  + +NPIII+Q Y + G+ D   E SAV +S+
Sbjct: 265 RTDNGARIKTWPNGKGYAKNILFKSLTFRETKNPIIIDQNYVDKGRLDV--EESAVAISN 324

Query: 347 VLYQGLRGTSTTKVAVKLSCSESIGCKNLAFEDIDIKSTDSDKTTQSSCSNAHGTSTNTV 397
           V +  LRGTS     +K+ CS+   CK++  + IDI + D +K     CSN +G S N  
Sbjct: 325 VTFTDLRGTSKLDEIIKIDCSKVTYCKDIVLDKIDIATVDGNKPI-VECSNVYGKSINAN 378

[Close]
BLAST of Cp4.1LG03g13700 vs. NCBI nr
Match: gi|700197727|gb|KGN52885.1| (hypothetical protein Csa_4G004940 [Cucumis sativus])

HSP 1 Score: 611.3 bits (1575), Expect = 1.2e-171
Identity = 293/412 (71.12%), Postives = 346/412 (83.98%), Query Frame = 1 

Query: 1   LQIGFLVVLVLVICLIFGLKTLHHHPQGNNDPKGNDGSPNVEYKNIDVVHYGAAGDGKTD 60
           L  GF+V +V+ IC+IF L+  HHHP+ N DP  ND      +K IDV+ YGAAGDGKTD
Sbjct: 5   LMAGFVVAIVIGICVIFALRK-HHHPESNADPNNND-PVITNFKAIDVIQYGAAGDGKTD 64

Query: 61  DSQAFLKAWMAVCKATTPSAMLVPSSKTFLLNPVKFEGPCMSSNVGVKILGKVVAPTDVD 120
           DS+AFLKAW AVC+A TPSAMLVPS+KTFLLNPV+F+GPCMSS+VGV+ILGK+VAP+D+D
Sbjct: 65  DSRAFLKAWKAVCEANTPSAMLVPSTKTFLLNPVQFQGPCMSSSVGVQILGKIVAPSDLD 124

Query: 121 DWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNQKSNGRPTALAVYDCDNLRLSGLT 180
            WK F  KNWL F+NVS L I GNG+IDGQGA WW++ S+G+PTALA+YDCD L LSGLT
Sbjct: 125 AWKVFDAKNWLLFSNVSRLVIQGNGEIDGQGAAWWDRDSDGKPTALAIYDCDGLHLSGLT 184

Query: 181 HINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGIDVAYSTDVKIQNCS---------- 240
           H NSP+SHMHIVRCNHASIS+LNI+APE+SPNTDGIDVA+S+ VKI NC+          
Sbjct: 185 HSNSPQSHMHIVRCNHASISKLNIVAPENSPNTDGIDVAHSSHVKIHNCNIGTGDDCIAI 244

Query: 241 ---SSNIHITNIECGPGHGISIGSLGEDGATSAVEEVRVQDCHLKGTMYGARIKTWQGGS 300
              +SNIHI NI+CGPGHGISIGSLG+DG +S+VE+VRVQ+CHLKGTMYGARIKTWQGG+
Sbjct: 245 SEGTSNIHIANIQCGPGHGISIGSLGKDGTSSSVEDVRVQNCHLKGTMYGARIKTWQGGA 304

Query: 301 GYARKISFRGITLDQVRNPIIINQYYCNGKKDCKNETSAVEVSDVLYQGLRGTSTTKVAV 360
           GYARKISF+GITLDQV  PI+I+QYYCNGK DCKN+TSAVEVSDVLYQGL GTS T+VAV
Sbjct: 305 GYARKISFQGITLDQVHKPILIDQYYCNGKTDCKNQTSAVEVSDVLYQGLHGTSATEVAV 364

Query: 361 KLSCSESIGCKNLAFEDIDIKSTDSDKTTQSSCSNAHGTSTNTVPTIDCLLP 400
           +LSCSE++GC+N+  EDIDI+  DSDK  QSSC +AHGTSTNT P +DCL P
Sbjct: 365 ELSCSETVGCRNIVLEDIDIRYADSDKIAQSSCDDAHGTSTNTFPAVDCLKP 414

[Close]
BLAST of Cp4.1LG03g13700 vs. NCBI nr
Match: gi|659108515|ref|XP_008454242.1| (PREDICTED: probable polygalacturonase At3g15720 [Cucumis melo])

HSP 1 Score: 495.0 bits (1273), Expect = 1.3e-136
Identity = 245/371 (66.04%), Postives = 285/371 (76.82%), Query Frame = 1 

Query: 1   LQIGFLVVLVLVICLIFGLKTLHHHPQGNNDPKGNDGSPN---------VEYKNIDVVHY 60
           L  GF+V +++ IC+IF L+  HHHP+ N +P  ND S N           +K I+VV Y
Sbjct: 5   LMAGFVVAIIIGICVIFALRK-HHHPESNANPINNDPSYNDPLDTDPVSTNFKTINVVQY 64

Query: 61  GAAGDGKTDDSQ--------------------------AFLKAWMAVCKATTPSAMLVPS 120
           GAAGDGKTDDSQ                          AFLKAW AVC+A TPSAMLVPS
Sbjct: 65  GAAGDGKTDDSQVNIHTFRLLSYVSNALLFLIVFIIQKAFLKAWKAVCEAKTPSAMLVPS 124

Query: 121 SKTFLLNPVKFEGPCMSSNVGVKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNG 180
           +KTFLLNPV+F+GPCMSS VGV+ILGK+VAP+D+D WK F  KNWL F+NVS L I GNG
Sbjct: 125 TKTFLLNPVQFQGPCMSSTVGVQILGKIVAPSDLDAWKHFDAKNWLLFSNVSRLVIQGNG 184

Query: 181 QIDGQGAGWWNQKSNGRPTALAVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQLNIL 240
           +IDGQGA WWN+ S+G+PTALA++DCD L+LSGLTHINSPKSHMHIVRCN ASIS+LNI+
Sbjct: 185 EIDGQGAAWWNRDSDGKPTALAIHDCDGLQLSGLTHINSPKSHMHIVRCNQASISKLNIV 244

Query: 241 APEDSPNTDGIDVAYSTDVKIQNCS-------------SSNIHITNIECGPGHGISIGSL 300
           APEDSPNTDGIDVAYST+VKI NC+             +SNIHI NI+CGPGHGISIGSL
Sbjct: 245 APEDSPNTDGIDVAYSTNVKIHNCNIGTGDDCIAISEGTSNIHIANIQCGPGHGISIGSL 304

Query: 301 GEDGATSAVEEVRVQDCHLKGTMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQY 324
           G+DG +S+VEEVRVQ+CHLKGTMYGARIKTWQGGSGYARKISF+GITLDQV  PI+INQY
Sbjct: 305 GKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHKPILINQY 364

[Close]
BLAST of Cp4.1LG03g13700 vs. NCBI nr
Match: gi|778697411|ref|XP_011654317.1| (PREDICTED: probable polygalacturonase At3g15720 [Cucumis sativus])

HSP 1 Score: 472.6 bits (1215), Expect = 6.7e-130
Identity = 222/306 (72.55%), Postives = 261/306 (85.29%), Query Frame = 1 

Query: 107 VKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNQKSNGRPTAL 166
           V+ILGK+VAP+D+D WK F  KNWL F+NVS L I GNG+IDGQGA WW++ S+G+PTAL
Sbjct: 14  VQILGKIVAPSDLDAWKVFDAKNWLLFSNVSRLVIQGNGEIDGQGAAWWDRDSDGKPTAL 73

Query: 167 AVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGIDVAYSTDVKI 226
           A+YDCD L LSGLTH NSP+SHMHIVRCNHASIS+LNI+APE+SPNTDGIDVA+S+ VKI
Sbjct: 74  AIYDCDGLHLSGLTHSNSPQSHMHIVRCNHASISKLNIVAPENSPNTDGIDVAHSSHVKI 133

Query: 227 QNCS-------------SSNIHITNIECGPGHGISIGSLGEDGATSAVEEVRVQDCHLKG 286
            NC+             +SNIHI NI+CGPGHGISIGSLG+DG +S+VE+VRVQ+CHLKG
Sbjct: 134 HNCNIGTGDDCIAISEGTSNIHIANIQCGPGHGISIGSLGKDGTSSSVEDVRVQNCHLKG 193

Query: 287 TMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQYYCNGKKDCKNETSAVEVSDVL 346
           TMYGARIKTWQGG+GYARKISF+GITLDQV  PI+I+QYYCNGK DCKN+TSAVEVSDVL
Sbjct: 194 TMYGARIKTWQGGAGYARKISFQGITLDQVHKPILIDQYYCNGKTDCKNQTSAVEVSDVL 253

Query: 347 YQGLRGTSTTKVAVKLSCSESIGCKNLAFEDIDIKSTDSDKTTQSSCSNAHGTSTNTVPT 400
           YQGL GTS T+VAV+LSCSE++GC+N+  EDIDI+  DSDK  QSSC +AHGTSTNT P 
Sbjct: 254 YQGLHGTSATEVAVELSCSETVGCRNIVLEDIDIRYADSDKIAQSSCDDAHGTSTNTFPA 313

[Close]
BLAST of Cp4.1LG03g13700 vs. NCBI nr
Match: gi|985430160|ref|XP_015385677.1| (PREDICTED: probable polygalacturonase At3g15720 [Citrus sinensis])

HSP 1 Score: 420.2 bits (1079), Expect = 3.9e-114
Identity = 205/370 (55.41%), Postives = 270/370 (72.97%), Query Frame = 1 

Query: 45  NIDVVHYGAAGDGKTDDSQAFLKAWMAVCKATTPSA-MLVPSSKTFLLNPVKFEGPCMSS 104
           ++ V+ +GA GDG+TDDSQAFLKAW ++C + + +A +LVP+ KTFLLNPV F+GPC SS
Sbjct: 81  SVSVIQFGAVGDGETDDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPVSFQGPCKSS 140

Query: 105 NVGVKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNQKSNGRP 164
           ++ V+I G +VAP     W     K WL F+NV+GL ++GNG+IDG+GA WW+ K N RP
Sbjct: 141 SINVQIQGNIVAPHS-SAWDGHDKKKWLLFSNVNGLTVNGNGKIDGKGASWWSNKQNQRP 200

Query: 165 TALAVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGIDVAYSTD 224
           TAL+   C+NL   GLTH++SP +H+ +  CN  SIS L I+APE SPNTDGID+ +S++
Sbjct: 201 TALSFGSCNNLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPESSPNTDGIDITHSSN 260

Query: 225 VKIQNCS-------------SSNIHITNIECGPGHGISIGSLGEDGATSAVEEVRVQDCH 284
           V+I++C+             +SNI +T + CGPGHGISIGSLG +G TS VE+V V+DC 
Sbjct: 261 VQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPGHGISIGSLGANGGTSIVEDVHVRDCT 320

Query: 285 LKGTMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQYYCNGKKDCKNETSAVEVS 344
            KGT  GARIKTWQGGSG+AR+ISF  I L+   NPIII+QYYC    DCKN+TSAV+VS
Sbjct: 321 FKGTKNGARIKTWQGGSGHARRISFERIRLESSDNPIIIDQYYCGPNGDCKNQTSAVKVS 380

Query: 345 DVLYQGLRGTSTTKVAVKLSCSESIGCKNLAFEDIDIKSTDSDKTTQSSCSNAHG-TSTN 400
           DV Y G +GTS+T+ AV+LSCSES+GC ++   +IDI  +DS K T++SC NAHG     
Sbjct: 381 DVSYIGFQGTSSTEEAVQLSCSESVGCTDIKINNIDITHSDSGKDTRASCINAHGELYGQ 440

[Close]
BLAST of Cp4.1LG03g13700 vs. NCBI nr
Match: gi|641825963|gb|KDO45211.1| (hypothetical protein CISIN_1g041224mg [Citrus sinensis])

HSP 1 Score: 420.2 bits (1079), Expect = 3.9e-114
Identity = 205/370 (55.41%), Postives = 270/370 (72.97%), Query Frame = 1 

Query: 45  NIDVVHYGAAGDGKTDDSQAFLKAWMAVCKATTPSA-MLVPSSKTFLLNPVKFEGPCMSS 104
           ++ V+ +GA GDG+TDDSQAFLKAW ++C + + +A +LVP+ KTFLLNPV F+GPC SS
Sbjct: 32  SVSVIQFGAVGDGETDDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPVSFQGPCKSS 91

Query: 105 NVGVKILGKVVAPTDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNQKSNGRP 164
           ++ V+I G +VAP     W     K WL F+NV+GL ++GNG+IDG+GA WW+ K N RP
Sbjct: 92  SINVQIQGNIVAPHS-SAWDGHDKKKWLLFSNVNGLTVNGNGKIDGKGASWWSNKQNQRP 151

Query: 165 TALAVYDCDNLRLSGLTHINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGIDVAYSTD 224
           TAL+   C+NL   GLTH++SP +H+ +  CN  SIS L I+APE SPNTDGID+ +S++
Sbjct: 152 TALSFGSCNNLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPESSPNTDGIDITHSSN 211

Query: 225 VKIQNCS-------------SSNIHITNIECGPGHGISIGSLGEDGATSAVEEVRVQDCH 284
           V+I++C+             +SNI +T + CGPGHGISIGSLG +G TS VE+V V+DC 
Sbjct: 212 VQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPGHGISIGSLGANGGTSIVEDVHVRDCT 271

Query: 285 LKGTMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQYYCNGKKDCKNETSAVEVS 344
            KGT  GARIKTWQGGSG+AR+ISF  I L+   NPIII+QYYC    DCKN+TSAV+VS
Sbjct: 272 FKGTKNGARIKTWQGGSGHARRISFERIRLESSDNPIIIDQYYCGPNGDCKNQTSAVKVS 331

Query: 345 DVLYQGLRGTSTTKVAVKLSCSESIGCKNLAFEDIDIKSTDSDKTTQSSCSNAHG-TSTN 400
           DV Y G +GTS+T+ AV+LSCSES+GC ++   +IDI  +DS K T++SC NAHG     
Sbjct: 332 DVSYIGFQGTSSTEEAVQLSCSESVGCTDIKINNIDITHSDSGKDTRASCINAHGELYGQ 391

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g13700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PGLR3_ARATH1.5e-10252.30Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 S... [more]
PGLR5_ARATH3.7e-8039.68Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana GN=At1g80170 PE=1 S... [more]
QRT2_ARATH1.1e-7138.48Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2[more]
PGLR_PERAE3.9e-6940.37Polygalacturonase OS=Persea americana PE=2 SV=1[more]
PGLR2_JUNAS5.0e-6938.62Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1[more]
BLAST of Cp4.1LG03g13700 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTD6_CUCSA8.4e-17271.12Uncharacterized protein OS=Cucumis sativus GN=Csa_4G004940 PE=3 SV=1[more]
A0A067E2X4_CITSI2.7e-11455.41Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041224mg PE=3 SV=1[more]
V4SNJ3_9ROSI6.8e-11354.99Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027074mg PE=3 SV=1[more]
M4CBM5_BRARP6.6e-10051.21Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1[more]
A0A078CL99_BRANA1.9e-9951.22BnaC03g39260D protein OS=Brassica napus GN=BnaC03g39260D PE=3 SV=1[more]
BLAST of Cp4.1LG03g13700 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15720.18.7e-10452.30 Pectin lyase-like superfamily protein[more]
AT4G35670.15.1e-8846.88 Pectin lyase-like superfamily protein[more]
AT5G27530.13.1e-8543.96 Pectin lyase-like superfamily protein[more]
AT1G80170.12.1e-8139.68 Pectin lyase-like superfamily protein[more]
AT5G44840.12.6e-7942.47 Pectin lyase-like superfamily protein[more]
BLAST of Cp4.1LG03g13700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700197727|gb|KGN52885.1|1.2e-17171.12hypothetical protein Csa_4G004940 [Cucumis sativus][more]
gi|659108515|ref|XP_008454242.1|1.3e-13666.04PREDICTED: probable polygalacturonase At3g15720 [Cucumis melo][more]
gi|778697411|ref|XP_011654317.1|6.7e-13072.55PREDICTED: probable polygalacturonase At3g15720 [Cucumis sativus][more]
gi|985430160|ref|XP_015385677.1|3.9e-11455.41PREDICTED: probable polygalacturonase At3g15720 [Citrus sinensis][more]
gi|641825963|gb|KDO45211.1|3.9e-11455.41hypothetical protein CISIN_1g041224mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
IPR000743Glyco_hydro_28
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071555 cell wall organization
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005576 extracellular region
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0005575 cellular_component
cellular_component GO:0046658 anchored component of plasma membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004650 polygalacturonase activity
molecular_function GO:0047911 galacturan 1,4-alpha-galacturonidase activity
molecular_function GO:0016829 lyase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g13700.1Cp4.1LG03g13700.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 73..384
score: 3.2
IPR000743Glycoside hydrolase, family 28PROSITEPS00502POLYGALACTURONASEcoord: 238..251
scor
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 42..397
score: 4.09E
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 44..398
score: 4.1E
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 47..398
score: 2.3E
NoneNo IPR availablePANTHERPTHR31375:SF42SUBFAMILY NOT NAMEDcoord: 47..398
score: 2.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g13700Cucsa.096470Cucumber (Gy14) v1cgycpeB0197
Cp4.1LG03g13700Cucsa.105310Cucumber (Gy14) v1cgycpeB0234
Cp4.1LG03g13700CmaCh14G013450Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g13700Cla012709Watermelon (97103) v1cpewmB600
Cp4.1LG03g13700Csa7G433170Cucumber (Chinese Long) v2cpecuB635
Cp4.1LG03g13700Csa4G004940Cucumber (Chinese Long) v2cpecuB615
Cp4.1LG03g13700MELO3C023406Melon (DHL92) v3.5.1cpemeB562
Cp4.1LG03g13700ClCG09G002770Watermelon (Charleston Gray)cpewcgB540
Cp4.1LG03g13700ClCG07G012700Watermelon (Charleston Gray)cpewcgB571
Cp4.1LG03g13700CSPI04G01520Wild cucumber (PI 183967)cpecpiB617
Cp4.1LG03g13700Lsi02G027240Bottle gourd (USVL1VR-Ls)cpelsiB499
Cp4.1LG03g13700Lsi07G004670Bottle gourd (USVL1VR-Ls)cpelsiB516
Cp4.1LG03g13700MELO3C032861.2Melon (DHL92) v3.6.1cpemedB698
Cp4.1LG03g13700CsaV3_4G001500Cucumber (Chinese Long) v3cpecucB0767
Cp4.1LG03g13700Bhi01G002762Wax gourdcpewgoB0793
Cp4.1LG03g13700CsGy4G001390Cucumber (Gy14) v2cgybcpeB552
Cp4.1LG03g13700Carg06504Silver-seed gourdcarcpeB0176
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g13700Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g13700Cucurbita moschata (Rifu)cmocpeB452
Cp4.1LG03g13700Melon (DHL92) v3.5.1cpemeB588
Cp4.1LG03g13700Cucumber (Gy14) v2cgybcpeB961
Cp4.1LG03g13700Melon (DHL92) v3.6.1cpemedB667
Cp4.1LG03g13700Silver-seed gourdcarcpeB0287
Cp4.1LG03g13700Cucurbita pepo (Zucchini)cpecpeB451
Cp4.1LG03g13700Cucurbita maxima (Rimu)cmacpeB493