Cp4.1LG03g13660 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g13660
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUbiquitin system component Cue protein, putative
LocationCp4.1LG03 : 9418492 .. 9421021 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACGCTCCTTTCCGTTAATGCATTAGAAGAGGGGGGAAACGGAGAGTTACAAAAACCTAACCCCCAAACAAATCAAATTCTTTCATTCCCTTTCTTCTTCCTTCCTTCCCTAACCTCTCTGCTTTCCCTTTCTGTTCGTCGTCTCCGATTTCAATTCCTGTGTTGCTCCGGCGACGAAGGTGGTCTTAGTCATTAGTTTCTGCAACCGACTACCCGGAGACGATGTCTGCTGTGGTGTGCGGAACCAAGAGATCCTTCTTTGAAGAACTCCCCCCTTCGCCTCCCATTTCCAAGCGCCTCCGCTGCTCCTCTTCTACTTCTCCCATTACTTTCCCTGCGCCCTCCTCTCTTATTGACCACCTCCACCATTTGTTTCCCCACATGGACCATCAGGTTTCTTCTTACTTCCCTTTTTTCTTTCACTTCGATTTTAATTCCTGTTTTTTACTCCCTGCTTCTGTGTAATCTCATATTTCTTGATGCCATTATAGCCTGAATCTTGATGGCCTTGGGGGACTCTTGTTATTCTCTTCTTGTATGTATTGCTTAAATATGCCTCTGGATTGTGCAATATCAACTAATTCGACTTACTTGCGGCATGGAATTTTAGTCGTTCTATTCAGTTTTATTTTGCAATGCAATGCATCTCTTTCGTTGACTTGTTTCATAATTGCTGCATGTATGCTATAATTAATATTATCCCCCAGGGTTTTCTTGATCGTAATTTGATTTTTCCTTCCAGCTTCTTGTAAGAGCCCTTGAAGAATGTGGCAACGACTTGGATGCTGCCATCAAAAGTTTGAGTGACCTGTGTTTGGGGTCTGCTGTTGAGAATCCTGTTGCTACTGCAGAACCAGAGCCAAATTTGGATCAAGGTATCACAAAATTCTAAGCAATAAAGGACATGCTTCATATGTAGTTTTTTTGTTTCTATGCGCTCAAGATTTTAATTATATTATGATGATGAATTCATCTCATTCAAGATTAATTCCCTGTTCAAGAACTTGATGCATGCTTATTTCATGGAAGTGATCCAATGGGTCCCCCTAACTTGCTGTCCCTAGTTTGGAATCCTAATTATACCCTTGCCATGTGCAGATTAGAGGACGGTTTAGGTTTTGATTTAAGATTTGAAAAACAAGAAACGGAGTTCTCATTCAGAGTACTATGAATCCATTTTCTTAGAATAAGATGTATTCTTTTCTCATGTAAGAGACTCAATGGTTTGCTACCTTAGTTCTGAAATGCTGGAGGTTAAGCTGTATGAGGAACGATAATCTTCCTTAATTCATTTGTGGTTGATGCTTGTGTTGCCCCTGATCGTTTTATAATGTGTTTTTTTTTTTTTTCTAGTCTTTGACATTTATTTCCATGCCTCTCAGCACTGTCTATTGTTAAAACGATATTAATGTTGGACTTATCGTACATGTTTCTGCAGAAAGCACTTTAATTAACCTTTTGTAATCCTTGAAATTTTATCTTATTTCTTCTCTATAAAGATCAATATTTCAGTGCATGCCTAAAAAATTCTCAGGTTCATTTGCTAATGATGGAGAGGCTGCTGCTTCTGAGAATTGTTCAGTACCGAGCAGTGTTTCTCTCGATGGTAGAAAATGGATTGACTTGTTTGTTGTGGAAATGGTGAGTGCTATTGACGTAGCTGATGCTAGGAGTCGTGCAGCAAGGGCATTGGAGGCTTTAGAGAACTCAATTAGTGCAAGTGCTGGTGTTGATGCTGCACAAAATTTCCACAAGGTACTAAACTTTTAATGGCCACTACAAATAATTTTCCACATCCTTGGGTTACAATTCTGGGATACTGGTAGGGTTTTTGGAGCATTAGAATGCAGTTAGAATTGGTTTGGGGTTATTTGCTTGTTAAACATGCTATTTGCTTGTAAACTTATGTTCTTTTCACTGTCTCCCAGGAAAATATGCAACTGAAGGAACAAATTGAAGTACTTCTACGAGAAAATACGATTCTTAAGCGGGCGGTCGCCATTCAGCATGAACGTCAGAAGGAATTTGAGGGTAAGAATATAGAGTTGCAGCATCTCAAACAGTTGGTATGTCAATATCAGGAGCAGCTCAGAACCCTAGAGGTGAGAATAAATGTACAACTTTTCTAAGTTTCTTCCCAATTATCAACTGTCCTGGTTTAAGTTCTTAAACATGTTTGTGTTGATACAACTTTTTCTGACCAGTTGAAAAAAAAAATCCTGTTGGTTTTGTTATACAGATAAACAATTATGCCTTGACAATGCATTTGAAGCAGACTGAACAAAGCAGCTCGATTCCGGGACGCTTCCATCCCGATGTGTTCTAGCAAAGAGAAATTTAATTGATCTAAATTATTGGTTGCAGAAAGAAACTAGTTGAGCGTGAGTGAGGGGAGGAAAGGAAGAGCAGGGAGGAACGGAGCATATTCATTAGCATCATATCAGTTTCCCATGAATAGAGGTACTGCTAGTCAGTTTGGTTGTTTTTTTAGTTTGAGTCTGGTCATACCATCAACCTGGATTGGTGACTG

mRNA sequence

AACGCTCCTTTCCGTTAATGCATTAGAAGAGGGGGGAAACGGAGAGTTACAAAAACCTAACCCCCAAACAAATCAAATTCTTTCATTCCCTTTCTTCTTCCTTCCTTCCCTAACCTCTCTGCTTTCCCTTTCTGTTCGTCGTCTCCGATTTCAATTCCTGTGTTGCTCCGGCGACGAAGGTGGTCTTAGTCATTAGTTTCTGCAACCGACTACCCGGAGACGATGTCTGCTGTGGTGTGCGGAACCAAGAGATCCTTCTTTGAAGAACTCCCCCCTTCGCCTCCCATTTCCAAGCGCCTCCGCTGCTCCTCTTCTACTTCTCCCATTACTTTCCCTGCGCCCTCCTCTCTTATTGACCACCTCCACCATTTGTTTCCCCACATGGACCATCAGCTTCTTGTAAGAGCCCTTGAAGAATGTGGCAACGACTTGGATGCTGCCATCAAAAGTTTGAGTGACCTGTGTTTGGGGTCTGCTGTTGAGAATCCTGTTGCTACTGCAGAACCAGAGCCAAATTTGGATCAAGGTTCATTTGCTAATGATGGAGAGGCTGCTGCTTCTGAGAATTGTTCAGTACCGAGCAGTGTTTCTCTCGATGGTAGAAAATGGATTGACTTGTTTGTTGTGGAAATGGTGAGTGCTATTGACGTAGCTGATGCTAGGAGTCGTGCAGCAAGGGCATTGGAGGCTTTAGAGAACTCAATTAGTGCAAGTGCTGGTGTTGATGCTGCACAAAATTTCCACAAGGAAAATATGCAACTGAAGGAACAAATTGAAGTACTTCTACGAGAAAATACGATTCTTAAGCGGGCGGTCGCCATTCAGCATGAACGTCAGAAGGAATTTGAGGGTAAGAATATAGAGTTGCAGCATCTCAAACAGTTGGTATGTCAATATCAGGAGCAGCTCAGAACCCTAGAGATAAACAATTATGCCTTGACAATGCATTTGAAGCAGACTGAACAAAGCAGCTCGATTCCGGGACGCTTCCATCCCGATGTGTTCTAGCAAAGAGAAATTTAATTGATCTAAATTATTGGTTGCAGAAAGAAACTAGTTGAGCGTGAGTGAGGGGAGGAAAGGAAGAGCAGCATCATATCAGTTTCCCATGAATAGAGGTACTGCTAGTCAGTTTGGTTGTTTTTTTAGTTTGAGTCTGGTCATACCATCAACCTGGATTGGTGACTG

Coding sequence (CDS)

ATGTCTGCTGTGGTGTGCGGAACCAAGAGATCCTTCTTTGAAGAACTCCCCCCTTCGCCTCCCATTTCCAAGCGCCTCCGCTGCTCCTCTTCTACTTCTCCCATTACTTTCCCTGCGCCCTCCTCTCTTATTGACCACCTCCACCATTTGTTTCCCCACATGGACCATCAGCTTCTTGTAAGAGCCCTTGAAGAATGTGGCAACGACTTGGATGCTGCCATCAAAAGTTTGAGTGACCTGTGTTTGGGGTCTGCTGTTGAGAATCCTGTTGCTACTGCAGAACCAGAGCCAAATTTGGATCAAGGTTCATTTGCTAATGATGGAGAGGCTGCTGCTTCTGAGAATTGTTCAGTACCGAGCAGTGTTTCTCTCGATGGTAGAAAATGGATTGACTTGTTTGTTGTGGAAATGGTGAGTGCTATTGACGTAGCTGATGCTAGGAGTCGTGCAGCAAGGGCATTGGAGGCTTTAGAGAACTCAATTAGTGCAAGTGCTGGTGTTGATGCTGCACAAAATTTCCACAAGGAAAATATGCAACTGAAGGAACAAATTGAAGTACTTCTACGAGAAAATACGATTCTTAAGCGGGCGGTCGCCATTCAGCATGAACGTCAGAAGGAATTTGAGGGTAAGAATATAGAGTTGCAGCATCTCAAACAGTTGGTATGTCAATATCAGGAGCAGCTCAGAACCCTAGAGATAAACAATTATGCCTTGACAATGCATTTGAAGCAGACTGAACAAAGCAGCTCGATTCCGGGACGCTTCCATCCCGATGTGTTCTAG

Protein sequence

MSAVVCGTKRSFFEELPPSPPISKRLRCSSSTSPITFPAPSSLIDHLHHLFPHMDHQLLVRALEECGNDLDAAIKSLSDLCLGSAVENPVATAEPEPNLDQGSFANDGEAAASENCSVPSSVSLDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISASAGVDAAQNFHKENMQLKEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQLRTLEINNYALTMHLKQTEQSSSIPGRFHPDVF
Homology
[Close]
BLAST of Cp4.1LG03g13660 vs. TrEMBL
Match: A0A0A0KVN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006460 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 1.5e-116
Identity = 226/261 (86.59%), Postives = 240/261 (91.95%), Query Frame = 1 

Query: 1   MSAVVCGTKRSFFEELPPSPPISKRLRCSSSTSPITFPAPSSLIDHLHHLFPHMDHQLLV 60
           MSAVVCG+KRSFFEELPPSPPI+KRLRCS+STSPI F APS  IDHL HLFP MD QLLV
Sbjct: 1   MSAVVCGSKRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSH-IDHLQHLFPQMDRQLLV 60

Query: 61  RALEECGNDLDAAIKSLSDLCLGSAVENPVATAEPEPNLDQGSFANDGEAAASENCSVPS 120
           RALEECGNDLDAAI+SLSDLCLGSAVENPVA+AEPE NLDQGS AN+GE AASEN S  S
Sbjct: 61  RALEECGNDLDAAIRSLSDLCLGSAVENPVASAEPETNLDQGSIANNGEVAASENSS--S 120

Query: 121 SVSLDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISASAGVDAAQNFHKENMQL 180
           SVSLDGRKWIDLFVVEM +A  VADA++RAARALEALENSI+A A VDAAQNFHKENMQL
Sbjct: 121 SVSLDGRKWIDLFVVEMTNATTVADAKTRAARALEALENSITARASVDAAQNFHKENMQL 180

Query: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQLRTLEINNYALT 240
           KEQIE+L+RENTILKRAVAIQHERQKEFE KN+ELQHLKQLV QYQEQLRTLEINNYALT
Sbjct: 181 KEQIELLVRENTILKRAVAIQHERQKEFEDKNLELQHLKQLVAQYQEQLRTLEINNYALT 240

Query: 241 MHLKQTEQSSSIPGRFHPDVF 262
           MHLKQ +QSSSIPGRFHPDVF
Sbjct: 241 MHLKQAQQSSSIPGRFHPDVF 258

[Close]
BLAST of Cp4.1LG03g13660 vs. TrEMBL
Match: M5WTN1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010184mg PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 3.3e-92
Identity = 183/261 (70.11%), Postives = 214/261 (81.99%), Query Frame = 1 

Query: 1   MSAVVCGTKRSFFEELPPSPPISKRLRCSSSTSPITFPAPSSLIDHLHHLFPHMDHQLLV 60
           MSA VCG+KRSFFEELPPSPP+SKRLRCSSSTSPI F AP  L+D L  LFP MD Q+L 
Sbjct: 1   MSAAVCGSKRSFFEELPPSPPLSKRLRCSSSTSPIRFSAPY-LLDQLRSLFPQMDPQVLE 60

Query: 61  RALEECGNDLDAAIKSLSDLCLGSAVENPVATAEPEPNLDQGSFANDGEAAASENCSVPS 120
           RALEECGND+DAA+K L +L +GSA EN  + AE + ++ QG   ND  AAASEN SVPS
Sbjct: 61  RALEECGNDIDAAVKLLHELRIGSAEENSASAAEQDDSVAQGILTNDEAAAASENPSVPS 120

Query: 121 SVSLDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISASAGVDAAQNFHKENMQL 180
           ++ +DG +W++LFV EM+SA  V DAR+RAA+ LE LE SISA AG +A QNF KENM L
Sbjct: 121 NLPVDGAEWVELFVREMMSANSVDDARARAAKVLEVLEKSISARAGAEATQNFQKENMLL 180

Query: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQLRTLEINNYALT 240
           K+QIE L+RENTILKRAV+IQHERQKE+E +N E Q+LKQLV QYQEQLRTLE+NNYALT
Sbjct: 181 KQQIEGLIRENTILKRAVSIQHERQKEYEERNQEFQNLKQLVSQYQEQLRTLEVNNYALT 240

Query: 241 MHLKQTEQSSSIPGRFHPDVF 262
           MHLKQ +QS+SIPGRFHPDVF
Sbjct: 241 MHLKQAQQSNSIPGRFHPDVF 260

[Close]
BLAST of Cp4.1LG03g13660 vs. TrEMBL
Match: W9RSC4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025755 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.4e-82
Identity = 170/261 (65.13%), Postives = 204/261 (78.16%), Query Frame = 1 

Query: 1   MSAVVCGTKRSFFEELPPSPPISKRLRCSSSTSPITFPAPSSLIDHLHHLFPHMDHQLLV 60
           MSA VCG+KRSFFE+LPPSPP+SKRLRCSSSTSPI F APS L+D L  +FP+++ Q+L 
Sbjct: 1   MSAAVCGSKRSFFEDLPPSPPLSKRLRCSSSTSPIRFSAPS-LLDQLRAVFPYIEIQVLE 60

Query: 61  RALEECGNDLDAAIKSLSDLCLGSAVENPVATAEPEPNLDQGSFANDGEAAASENCSVPS 120
           RALE+  ND++AAIKSL DL L S  EN     E +  +++G   NDG  A SEN S   
Sbjct: 61  RALEDFDNDVEAAIKSLRDLRLRSTEENSDPAEEADVAVEKG--VNDGNVAVSENPSASD 120

Query: 121 SVSLDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISASAGVDAAQNFHKENMQL 180
           ++ +DG +W++LFV EM+SA    D R+RA+RALE LE SISA AG +AAQ F KENM L
Sbjct: 121 NLPVDGAEWVNLFVREMMSATSPEDLRARASRALELLEKSISAHAGAEAAQAFQKENMLL 180

Query: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQLRTLEINNYALT 240
           K Q+E L+RENTILK AV IQHERQK++E +N E+QHLKQLV QYQEQLRTLE+NNYALT
Sbjct: 181 KAQLEGLIRENTILKHAVTIQHERQKQYEDRNQEIQHLKQLVAQYQEQLRTLEVNNYALT 240

Query: 241 MHLKQTEQSSSIPGRFHPDVF 262
           MHLKQ +QSSSIPGRFHPDVF
Sbjct: 241 MHLKQAQQSSSIPGRFHPDVF 258

[Close]
BLAST of Cp4.1LG03g13660 vs. TrEMBL
Match: A0A061GFQ5_THECC (Ubiquitin system component Cue protein, putative OS=Theobroma cacao GN=TCM_027247 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 5.8e-81
Identity = 174/277 (62.82%), Postives = 208/277 (75.09%), Query Frame = 1 

Query: 1   MSAVVCGTKRSFFEELPPSPP--ISKRLR-CS-SSTSPITFPAPSSLIDHLHHLFPHMDH 60
           MSA VCG+KRSFFE++P SP   +SK+LR CS SS S + FP P S + HL  LFPHMD 
Sbjct: 1   MSAAVCGSKRSFFEDIPSSPSASVSKKLRRCSPSSPSSVRFPPPPSSLAHLEALFPHMDP 60

Query: 61  QLLVRALEECGNDLDAAIKSLSDLCLGSA---------VENPVATAEPEPNLDQGSFAND 120
           +LL RAL ECGND+D A+K L +LCLG+A         VE   ATAE        +  ND
Sbjct: 61  ELLERALLECGNDIDTAVKRLQELCLGAAEATGERSGPVEELGATAE------LCTLTND 120

Query: 121 GEAAAS---ENCSVPSSVSLDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISAS 180
           GEA A+   +N S P  + +DG +W+DLFV EM+SA  V DA++RA + LE LENSIS S
Sbjct: 121 GEATATVPVQNPSAPEKLPVDGAEWVDLFVREMMSATSVDDAKARAFKLLEVLENSISRS 180

Query: 181 AGVDAAQNFHKENMQLKEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQ 240
           A  +AAQNFHKEN+ LKEQIEVL++ENT+LKRAVAIQHERQKE++ KN ELQHLKQLV Q
Sbjct: 181 AAEEAAQNFHKENIMLKEQIEVLIQENTVLKRAVAIQHERQKEYQDKNHELQHLKQLVSQ 240

Query: 241 YQEQLRTLEINNYALTMHLKQTEQSSSIPGRFHPDVF 262
           YQEQLRTLE+NNYALTMHL+Q +QS+SIPGRFHPDVF
Sbjct: 241 YQEQLRTLEVNNYALTMHLRQAQQSNSIPGRFHPDVF 271

[Close]
BLAST of Cp4.1LG03g13660 vs. TrEMBL
Match: A0A067KXR0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06121 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.2e-79
Identity = 164/263 (62.36%), Postives = 203/263 (77.19%), Query Frame = 1 

Query: 1   MSAVVCGTKRSFFEELPPSPPISKRLRCSSS-TSPITFPAPS-SLIDHLHHLFPHMDHQL 60
           MSA VCG+KRSFF E  PSPP+SKR+RCSSS TSP+ F  PS S + HL  +FPH+  QL
Sbjct: 1   MSAAVCGSKRSFFLEDVPSPPVSKRIRCSSSSTSPVRFSPPSLSPVHHLKAIFPHIHSQL 60

Query: 61  LVRALEECGNDLDAAIKSLSDLCLGSAVENPVATAEPEPNLDQGSFANDGEAAASENCSV 120
           L RALEECGNDLD+A+K L++  L SA  N  +  E   N++QG+  NDG+AAASEN S 
Sbjct: 61  LERALEECGNDLDSAVKILNERPLESAEHNSASVEEAGLNVEQGTLPNDGDAAASENTSA 120

Query: 121 PSSVSLDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISASAGVDAAQNFHKENM 180
           PS++  DG +W+DLFV EM++A  V DAR+RA+R LE LE SIS+ A  + AQ+F KEN 
Sbjct: 121 PSNLPADGAEWVDLFVREMMNATSVDDARARASRVLEILEKSISSHAAKETAQSFQKENT 180

Query: 181 QLKEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQLRTLEINNYA 240
            LKE +EV++RENTILKRAV+IQHERQKEFE KN ELQ   Q++ QYQE+L+TLE+NNYA
Sbjct: 181 MLKEHVEVVVRENTILKRAVSIQHERQKEFEDKNRELQ---QVISQYQEKLKTLEMNNYA 240

Query: 241 LTMHLKQTEQSSSIPGRFHPDVF 262
           L MHL+Q +QSS IPGRF+PDVF
Sbjct: 241 LMMHLRQAQQSSPIPGRFNPDVF 260

[Close]
BLAST of Cp4.1LG03g13660 vs. TAIR10
Match: AT5G32440.3 (AT5G32440.3 Ubiquitin system component Cue protein)

HSP 1 Score: 266.5 bits (680), Expect = 1.7e-71
Identity = 152/275 (55.27%), Postives = 198/275 (72.00%), Query Frame = 1 

Query: 1   MSAVVCGTKRSFFEELPP-SPPISKRLRCSSSTSPITF-----PAPSSLIDHLHHLFPHM 60
           MSA+VCG KRS FE+L   SPP+SK+LRC SS+S   F     P+ S L+DHL  +FP M
Sbjct: 1   MSAIVCG-KRSLFEDLAAASPPVSKKLRCFSSSSSSRFSPPIPPSSSLLLDHLAAIFPDM 60

Query: 61  DHQLLVRALEECGNDLDAAIKSLSDLCLGSAVEN--------PVATAEPEPNLDQGSFAN 120
           D Q+L RA+EECG+DLD+AI+ L+ L L SA +N        PV   EP     Q     
Sbjct: 61  DKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQEPNVEPQQ----- 120

Query: 121 DGEAAASENCSVPSSVSLDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISASAG 180
            G +A  E    P+ ++LDG +W++LFV EM++A D+ DA++RAARALEALE SI+A  G
Sbjct: 121 QGRSAKEE----PNVLNLDGTEWVELFVREMMNASDMKDAKARAARALEALEKSINARTG 180

Query: 181 VDAAQNFHKENMQLKEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQ 240
            DA QN  +ENM LK+Q+E +++EN++LKRAV  Q +RQ+E E ++ ELQHL+QLV QYQ
Sbjct: 181 TDAMQNLQQENMMLKQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQHLRQLVTQYQ 240

Query: 241 EQLRTLEINNYALTMHLKQTEQSSSIPGRFHPDVF 262
           EQLRTLE+NNYALT+HLKQ +Q+SSIPGR+HPDVF
Sbjct: 241 EQLRTLEVNNYALTLHLKQAQQNSSIPGRYHPDVF 265

[Close]
BLAST of Cp4.1LG03g13660 vs. TAIR10
Match: AT1G80040.3 (AT1G80040.3 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 198.4 bits (503), Expect = 5.6e-51
Identity = 123/273 (45.05%), Postives = 165/273 (60.44%), Query Frame = 1 

Query: 1   MSAVVCGTKRSFFEELPPSPPISKRLRC-SSSTSPITFPAPSSLIDHLHHLFPHMD---- 60
           MSAV CGTKRS+F++   SPP SKR RC S S SPI    PSS +D LH  FPH++    
Sbjct: 1   MSAVYCGTKRSYFDD-NSSPPSSKRFRCFSPSNSPIWSSPPSSSLDQLHSAFPHIELTVA 60

Query: 61  -------HQLLVRALEECGNDLDAAIKSLSDLCLGSAVENPVATAEPEPNLDQGSFANDG 120
                   Q+LV+ALE+ G+D +AA+KSL               +  E   ++   A  G
Sbjct: 61  SKIHVSVAQVLVKALEDNGSDFNAAMKSLYSFA-----------SSEEKKAEE--LAAGG 120

Query: 121 EAAASENCSVPSSVSLDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISASAGVD 180
            A    +     +    G  W++L V E++ +    DA+ RAAR LEALE  +SA A  +
Sbjct: 121 AATQETDAVCGGNPPTSGDDWVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARAREE 180

Query: 181 AAQNFHKENMQLKEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQ 240
           A   F +E + +++Q+E L+++NT+LKRAVAIQHERQK  E  N +L  LKQLV QYQE+
Sbjct: 181 AGNKFQEEKVAVQQQVETLVKDNTVLKRAVAIQHERQKALEDANHQLGLLKQLVPQYQEK 240

Query: 241 LRTLEINNYALTMHLKQTEQSSSIPGRFHPDVF 262
           LR LE+NNYAL M L+Q E  +S+P RF+PDVF
Sbjct: 241 LRNLEVNNYALRMQLQQVEHGNSMPARFNPDVF 259

[Close]
BLAST of Cp4.1LG03g13660 vs. TAIR10
Match: AT5G02510.1 (AT5G02510.1 BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1))

HSP 1 Score: 99.4 bits (246), Expect = 3.5e-21
Identity = 55/139 (39.57%), Postives = 85/139 (61.15%), Query Frame = 1 

Query: 124 LDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISASAGVDAAQNFHKENMQLKEQ 183
           +DG KW+D  V EM  AI++ D R R A  LEALE+ I  +        +      +KE 
Sbjct: 45  IDGAKWVDRLVSEMTKAINIDDMRRRVAVILEALESIIKKNTNASKKLEY----ASMKES 104

Query: 184 IEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQLRTLEINNYALTMHL 243
           ++ L+ +N ILKR +A QH+R  E E K  ++ HL+ +V QYQEQ+  LE++NYA+ +HL
Sbjct: 105 LQSLINDNQILKRVIANQHQRSSENEEKAKQVLHLRGVVGQYQEQVHKLELSNYAMKLHL 164

Query: 244 KQT-EQSSSIPGRFHPDVF 262
           +++ +Q +S  G   PD++
Sbjct: 165 QRSQQQQTSFSGNLPPDIY 179

[Close]
BLAST of Cp4.1LG03g13660 vs. NCBI nr
Match: gi|449468932|ref|XP_004152175.1| (PREDICTED: uncharacterized protein LOC101208593 [Cucumis sativus])

HSP 1 Score: 427.2 bits (1097), Expect = 2.1e-116
Identity = 226/261 (86.59%), Postives = 240/261 (91.95%), Query Frame = 1 

Query: 1   MSAVVCGTKRSFFEELPPSPPISKRLRCSSSTSPITFPAPSSLIDHLHHLFPHMDHQLLV 60
           MSAVVCG+KRSFFEELPPSPPI+KRLRCS+STSPI F APS  IDHL HLFP MD QLLV
Sbjct: 1   MSAVVCGSKRSFFEELPPSPPIAKRLRCSTSTSPIRFAAPSH-IDHLQHLFPQMDRQLLV 60

Query: 61  RALEECGNDLDAAIKSLSDLCLGSAVENPVATAEPEPNLDQGSFANDGEAAASENCSVPS 120
           RALEECGNDLDAAI+SLSDLCLGSAVENPVA+AEPE NLDQGS AN+GE AASEN S  S
Sbjct: 61  RALEECGNDLDAAIRSLSDLCLGSAVENPVASAEPETNLDQGSIANNGEVAASENSS--S 120

Query: 121 SVSLDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISASAGVDAAQNFHKENMQL 180
           SVSLDGRKWIDLFVVEM +A  VADA++RAARALEALENSI+A A VDAAQNFHKENMQL
Sbjct: 121 SVSLDGRKWIDLFVVEMTNATTVADAKTRAARALEALENSITARASVDAAQNFHKENMQL 180

Query: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQLRTLEINNYALT 240
           KEQIE+L+RENTILKRAVAIQHERQKEFE KN+ELQHLKQLV QYQEQLRTLEINNYALT
Sbjct: 181 KEQIELLVRENTILKRAVAIQHERQKEFEDKNLELQHLKQLVAQYQEQLRTLEINNYALT 240

Query: 241 MHLKQTEQSSSIPGRFHPDVF 262
           MHLKQ +QSSSIPGRFHPDVF
Sbjct: 241 MHLKQAQQSSSIPGRFHPDVF 258

[Close]
BLAST of Cp4.1LG03g13660 vs. NCBI nr
Match: gi|659108393|ref|XP_008454175.1| (PREDICTED: uncharacterized protein LOC103494658 [Cucumis melo])

HSP 1 Score: 416.4 bits (1069), Expect = 3.7e-113
Identity = 223/261 (85.44%), Postives = 235/261 (90.04%), Query Frame = 1 

Query: 1   MSAVVCGTKRSFFEELPPSPPISKRLRCSSSTSPITFPAPSSLIDHLHHLFPHMDHQLLV 60
           MSAVVCG+KRSFFEELPPSPPI+KR RCS  TSPI F APS  IDHL HLFP MDHQLLV
Sbjct: 1   MSAVVCGSKRSFFEELPPSPPIAKRHRCS--TSPIRFAAPSH-IDHLQHLFPQMDHQLLV 60

Query: 61  RALEECGNDLDAAIKSLSDLCLGSAVENPVATAEPEPNLDQGSFANDGEAAASENCSVPS 120
           RALEECGNDLDAAI+SLSDLCLGSAVENPVA+AEPE NLDQGS A DGEAA SEN S  S
Sbjct: 61  RALEECGNDLDAAIRSLSDLCLGSAVENPVASAEPETNLDQGSIAKDGEAAVSENSS--S 120

Query: 121 SVSLDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISASAGVDAAQNFHKENMQL 180
           +VSLDGRKWIDLFV EM +A  VADA++RAARALEALENSI+A   VDAAQNFHKENMQL
Sbjct: 121 TVSLDGRKWIDLFVGEMTNATTVADAKTRAARALEALENSITARVSVDAAQNFHKENMQL 180

Query: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQLRTLEINNYALT 240
           KEQIEVLLRENTILKRAVAIQHERQKEFE KN+ELQHLKQL+ QYQEQLRTLEINNYALT
Sbjct: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQLLAQYQEQLRTLEINNYALT 240

Query: 241 MHLKQTEQSSSIPGRFHPDVF 262
           MHLKQ +QSSSIPGRFHPDVF
Sbjct: 241 MHLKQAQQSSSIPGRFHPDVF 256

[Close]
BLAST of Cp4.1LG03g13660 vs. NCBI nr
Match: gi|595940696|ref|XP_007215835.1| (hypothetical protein PRUPE_ppa010184mg [Prunus persica])

HSP 1 Score: 346.3 bits (887), Expect = 4.7e-92
Identity = 183/261 (70.11%), Postives = 214/261 (81.99%), Query Frame = 1 

Query: 1   MSAVVCGTKRSFFEELPPSPPISKRLRCSSSTSPITFPAPSSLIDHLHHLFPHMDHQLLV 60
           MSA VCG+KRSFFEELPPSPP+SKRLRCSSSTSPI F AP  L+D L  LFP MD Q+L 
Sbjct: 1   MSAAVCGSKRSFFEELPPSPPLSKRLRCSSSTSPIRFSAPY-LLDQLRSLFPQMDPQVLE 60

Query: 61  RALEECGNDLDAAIKSLSDLCLGSAVENPVATAEPEPNLDQGSFANDGEAAASENCSVPS 120
           RALEECGND+DAA+K L +L +GSA EN  + AE + ++ QG   ND  AAASEN SVPS
Sbjct: 61  RALEECGNDIDAAVKLLHELRIGSAEENSASAAEQDDSVAQGILTNDEAAAASENPSVPS 120

Query: 121 SVSLDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISASAGVDAAQNFHKENMQL 180
           ++ +DG +W++LFV EM+SA  V DAR+RAA+ LE LE SISA AG +A QNF KENM L
Sbjct: 121 NLPVDGAEWVELFVREMMSANSVDDARARAAKVLEVLEKSISARAGAEATQNFQKENMLL 180

Query: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQLRTLEINNYALT 240
           K+QIE L+RENTILKRAV+IQHERQKE+E +N E Q+LKQLV QYQEQLRTLE+NNYALT
Sbjct: 181 KQQIEGLIRENTILKRAVSIQHERQKEYEERNQEFQNLKQLVSQYQEQLRTLEVNNYALT 240

Query: 241 MHLKQTEQSSSIPGRFHPDVF 262
           MHLKQ +QS+SIPGRFHPDVF
Sbjct: 241 MHLKQAQQSNSIPGRFHPDVF 260

[Close]
BLAST of Cp4.1LG03g13660 vs. NCBI nr
Match: gi|645245069|ref|XP_008228707.1| (PREDICTED: uncharacterized protein LOC103328095 isoform X2 [Prunus mume])

HSP 1 Score: 344.4 bits (882), Expect = 1.8e-91
Identity = 182/261 (69.73%), Postives = 214/261 (81.99%), Query Frame = 1 

Query: 1   MSAVVCGTKRSFFEELPPSPPISKRLRCSSSTSPITFPAPSSLIDHLHHLFPHMDHQLLV 60
           MSA VCG+KRSFFEELPPSPP+SKRLRCSSSTSPI F AP  L+D L  LFP MD Q+L 
Sbjct: 1   MSAAVCGSKRSFFEELPPSPPLSKRLRCSSSTSPIRFSAPY-LLDQLRSLFPQMDPQVLE 60

Query: 61  RALEECGNDLDAAIKSLSDLCLGSAVENPVATAEPEPNLDQGSFANDGEAAASENCSVPS 120
           RALEECGND+DAA+K L +L +GSA EN  + AE + ++ QG   ND  AAASEN SVPS
Sbjct: 61  RALEECGNDIDAAVKLLHELRIGSAEENSASAAEQDDSVAQGILTNDEAAAASENPSVPS 120

Query: 121 SVSLDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISASAGVDAAQNFHKENMQL 180
           ++ +DG +W++LFV EM+SA  V DAR+RAA+ LE LE SISA AG +A Q+F KENM L
Sbjct: 121 NLPVDGAEWVELFVREMMSANSVDDARARAAKVLEVLEKSISARAGAEATQSFQKENMLL 180

Query: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQLRTLEINNYALT 240
           K+QIE L+RENTILKRAV+IQHERQKE+E +N E Q+LKQLV QYQEQLRTLE+NNYALT
Sbjct: 181 KQQIEGLIRENTILKRAVSIQHERQKEYEERNQEFQNLKQLVSQYQEQLRTLEVNNYALT 240

Query: 241 MHLKQTEQSSSIPGRFHPDVF 262
           MHLKQ +QS+SIPGRFHPDVF
Sbjct: 241 MHLKQAQQSNSIPGRFHPDVF 260

[Close]
BLAST of Cp4.1LG03g13660 vs. NCBI nr
Match: gi|470134936|ref|XP_004303292.1| (PREDICTED: uncharacterized protein LOC101292723 [Fragaria vesca subsp. vesca])

HSP 1 Score: 340.1 bits (871), Expect = 3.4e-90
Identity = 175/261 (67.05%), Postives = 210/261 (80.46%), Query Frame = 1 

Query: 1   MSAVVCGTKRSFFEELPPSPPISKRLRCSSSTSPITFPAPSSLIDHLHHLFPHMDHQLLV 60
           MSA VCG+KRSFFEELPPSPP++KRLRCSSSTSP+ F +P  LID L  +FPHMD Q+L 
Sbjct: 1   MSAAVCGSKRSFFEELPPSPPLTKRLRCSSSTSPVRFSSPY-LIDQLRSVFPHMDPQILE 60

Query: 61  RALEECGNDLDAAIKSLSDLCLGSAVENPVATAEPEPNLDQGSFANDGEAAASENCSVPS 120
           RALEECGND+DAAIK L++L +G   EN    AEP   + +G   ++  AAASEN S PS
Sbjct: 61  RALEECGNDIDAAIKRLNELHIGYGDENAAPAAEPNDIVQKGILTDEEAAAASENTSAPS 120

Query: 121 SVSLDGRKWIDLFVVEMVSAIDVADARSRAARALEALENSISASAGVDAAQNFHKENMQL 180
           ++  DG +W++LFV EM+SA  V DAR RAA+ LE LE SIS+ AG +AAQNF KENM L
Sbjct: 121 NLPADGAEWVELFVREMMSATSVDDARGRAAKVLEVLEKSISSRAGAEAAQNFQKENMLL 180

Query: 181 KEQIEVLLRENTILKRAVAIQHERQKEFEGKNIELQHLKQLVCQYQEQLRTLEINNYALT 240
           KEQIE L+R+N++LKRAV+IQHERQKE+EG+N E QHLKQLV QYQEQ+RTLE+NNYALT
Sbjct: 181 KEQIEGLIRDNSVLKRAVSIQHERQKEYEGRNQEFQHLKQLVTQYQEQMRTLELNNYALT 240

Query: 241 MHLKQTEQSSSIPGRFHPDVF 262
           MHLKQ +Q +SIPGRFHPDVF
Sbjct: 241 MHLKQAQQGNSIPGRFHPDVF 260

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g13660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG03g13660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVN0_CUCSA1.5e-11686.59Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006460 PE=4 SV=1[more]
M5WTN1_PRUPE3.3e-9270.11Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010184mg PE=4 SV=1[more]
W9RSC4_9ROSA1.4e-8265.13Uncharacterized protein OS=Morus notabilis GN=L484_025755 PE=4 SV=1[more]
A0A061GFQ5_THECC5.8e-8162.82Ubiquitin system component Cue protein, putative OS=Theobroma cacao GN=TCM_02724... [more]
A0A067KXR0_JATCU3.2e-7962.36Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06121 PE=4 SV=1[more]
BLAST of Cp4.1LG03g13660 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G32440.31.7e-7155.27 Ubiquitin system component Cue protein[more]
AT1G80040.35.6e-5145.05 FUNCTIONS IN: molecular_function unknown[more]
AT5G02510.13.5e-2139.57 BEST Arabidopsis thaliana protein match is: Ubiquitin system compone... [more]
BLAST of Cp4.1LG03g13660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449468932|ref|XP_004152175.1|2.1e-11686.59PREDICTED: uncharacterized protein LOC101208593 [Cucumis sativus][more]
gi|659108393|ref|XP_008454175.1|3.7e-11385.44PREDICTED: uncharacterized protein LOC103494658 [Cucumis melo][more]
gi|595940696|ref|XP_007215835.1|4.7e-9270.11hypothetical protein PRUPE_ppa010184mg [Prunus persica][more]
gi|645245069|ref|XP_008228707.1|1.8e-9169.73PREDICTED: uncharacterized protein LOC103328095 isoform X2 [Prunus mume][more]
gi|470134936|ref|XP_004303292.1|3.4e-9067.05PREDICTED: uncharacterized protein LOC101292723 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like_sf
IPR003892CUE
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0006457 protein folding
biological_process GO:0009408 response to heat
biological_process GO:0010027 thylakoid membrane organization
cellular_component GO:0005575 cellular_component
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g13660.1Cp4.1LG03g13660.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003892Ubiquitin system component CuePFAMPF02845CUEcoord: 42..78
score: 5.
IPR003892Ubiquitin system component CuePROFILEPS51140CUEcoord: 39..85
score: 11
IPR009060UBA-likeunknownSSF46934UBA-likecoord: 38..81
score: 4.7
NoneNo IPR availableunknownCoilCoilcoord: 170..197
scor
NoneNo IPR availablePANTHERPTHR31245FAMILY NOT NAMEDcoord: 1..261
score: 2.7E
NoneNo IPR availablePANTHERPTHR31245:SF1UBIQUITIN SYSTEM COMPONENT CUE PROTEINcoord: 1..261
score: 2.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g13660Cucsa.095990Cucumber (Gy14) v1cgycpeB0196
Cp4.1LG03g13660CmaCh14G013610Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g13660CmaCh14G013780Cucurbita maxima (Rimu)cmacpeB286
Cp4.1LG03g13660CmaCh01G001550Cucurbita maxima (Rimu)cmacpeB493
Cp4.1LG03g13660CmoCh14G014140Cucurbita moschata (Rifu)cmocpeB248
Cp4.1LG03g13660CmoCh14G013940Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g13660CmoCh01G001620Cucurbita moschata (Rifu)cmocpeB452
Cp4.1LG03g13660Cla012727Watermelon (97103) v1cpewmB600
Cp4.1LG03g13660Cla012749Watermelon (97103) v1cpewmB607
Cp4.1LG03g13660Csa4G006460Cucumber (Chinese Long) v2cpecuB620
Cp4.1LG03g13660MELO3C017838Melon (DHL92) v3.5.1cpemeB587
Cp4.1LG03g13660ClCG07G012180Watermelon (Charleston Gray)cpewcgB568
Cp4.1LG03g13660ClCG07G012420Watermelon (Charleston Gray)cpewcgB571
Cp4.1LG03g13660CSPI04G02020Wild cucumber (PI 183967)cpecpiB622
Cp4.1LG03g13660Lsi07G004390Bottle gourd (USVL1VR-Ls)cpelsiB516
Cp4.1LG03g13660Lsi07G004120Bottle gourd (USVL1VR-Ls)cpelsiB515
Cp4.1LG03g13660MELO3C017838.2Melon (DHL92) v3.6.1cpemedB697
Cp4.1LG03g13660CsaV3_4G001980Cucumber (Chinese Long) v3cpecucB0772
Cp4.1LG03g13660Bhi01G002810Wax gourdcpewgoB0796
Cp4.1LG03g13660Bhi01G002729Wax gourdcpewgoB0793
Cp4.1LG03g13660CsGy4G001950Cucumber (Gy14) v2cgybcpeB556
Cp4.1LG03g13660Carg04220Silver-seed gourdcarcpeB0287
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g13660Cp4.1LG02g14960Cucurbita pepo (Zucchini)cpecpeB451
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g13660Cucumber (Gy14) v1cgycpeB0197
Cp4.1LG03g13660Cucumber (Gy14) v1cgycpeB0234
Cp4.1LG03g13660Wild cucumber (PI 183967)cpecpiB617
Cp4.1LG03g13660Cucumber (Chinese Long) v2cpecuB615
Cp4.1LG03g13660Cucumber (Chinese Long) v2cpecuB635
Cp4.1LG03g13660Bottle gourd (USVL1VR-Ls)cpelsiB499
Cp4.1LG03g13660Watermelon (Charleston Gray)cpewcgB540
Cp4.1LG03g13660Melon (DHL92) v3.5.1cpemeB562
Cp4.1LG03g13660Melon (DHL92) v3.5.1cpemeB588
Cp4.1LG03g13660Cucumber (Gy14) v2cgybcpeB552
Cp4.1LG03g13660Cucumber (Gy14) v2cgybcpeB961
Cp4.1LG03g13660Melon (DHL92) v3.6.1cpemedB667
Cp4.1LG03g13660Melon (DHL92) v3.6.1cpemedB698
Cp4.1LG03g13660Silver-seed gourdcarcpeB0176
Cp4.1LG03g13660Cucumber (Chinese Long) v3cpecucB0767
Cp4.1LG03g13660Wax gourdcpewgoB0775