Cp4.1LG03g13510 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGCAACAGATGGCGCTAGACTGAAGGAGAAGGAAACAGAAAGTAGCAGCAATGGCGGAAGACCGGGCCTGCAGGAGAACCAAGAATCTCGCTCCTCCGCTCCTCCGCTCATTCCGATCAAGATCTCTCAAAAACATCCCTATAAAAGCACCTTACTCCTCCTCACTTCAACACAACAAGAAAAACCAAAAAAAGAATAAAACCATTAACCATTTTCCCCCCCCCGCCCAACCTCGATTTGAAGGAACCTGATGGCGCTTCATTAATCTATACTTATGGAAAATCGAAAACACTGATTTCACCAAAAACTCTCTCCGTTTTCTTTTTCGTTGCTATAATCATATATATTTTCTTCTGTTTCCTTCTTTATATATCTCAAAATGACCGACATCAGCTTAGAGGAGATCAAGAATGAGAACGTCGATCTTGTAAGTTCTTCTCATCTTGTTTATGTTTCTGTTTGAGAAACGATGAACGTATTGGAAGATTTGGTTTCAGTTTTCGAAGGAAGCTTTTGTTGATGGAACTTAAAATTTTGGCAATCTGTGATTTACAGGAGCGTATACCCGTTGAGGAAGTGTTTGAACAACTGAAATGTACCCGAGAGGGTTTGTCCTCAGAGGAGGGGCGCCAAAGGCTTCAACTCTTTGGCCCAAATAAGCTTGAAGAGAAGAAGGTCACTTAATAGCTTAATGATCAGATGTAGTTTTCTCCACTTTTGCTATCAATTGAAAGAAAATTCTAATGGTTTTTAAACTCTTCATGAACAGGAAAGTAAATTTCTCAAGTTTCTGGGGTTTATGTGGAATCCACTTTCGTGGGTTATGGAAGCTGCTGCTATCATGGCGATTGTTCTTGCCAATGGAGGGGTAACGTCTCTCTTTCTCTCTGTATTCTATAAGGAAAAGGATAAGCTCTTGCTGAGATAGTCATATGATTTTAATGGCTAAATTGCAGGGGCAACCACCCGACTGGCAAGATTTTGTGGGTATTACTGCATTGCTTATTATCAATTCCACAATCAGCTTTATAGAGGAAAACAATGCAGGCAATGCTGCAGCTGCACTCATGGCAGGACTTGCACCAAAAACCAAGGTAAAGAGTTGATTGATACATGTGTGATATTCCGAATCCCCATTACTAATGGAATCGAAATCATCTCTGACTTTGTTGTTCATGTTAGGTTCTTCGTGATGGAAGATGGTGTGAGGAAGAGGCTGCAATCTTAGTTCCAGGAGATGTGATCAGCGTTAAGTTAGGAGATATCATTCCAGCCGATGCTCGTTTGTTGGAAGGCGATCCGCTGAAGATTGATCAGTCGGCACTTACCGGTGAGTCTTTACCAGTGACAAGGAGCTCTGGTGATGAAGTGTTTTCTGGTTCCACTGTAAAGCAAGGGGAGATCGAGGCTGTTGTAATTGCCACTGGTGTCCACACCTTCTTTGGGAAGGCTGCTCACTTGGTTGATAGCACAAATCAAGTGGGTCATTTCCAAAAGGTGTTGACTGCCATTGGAAACTTCTGCATTTGCTCCATCGCCGTAGGGATGGTGATAGAAATAGTAGTGATGTACCCAATTCAACATCGTAGATATCGAGATGGTATTAACAATCTCTTGGTGCTACTCATTGGGGGTATCCCAATTGCCATGCCCACTGTTTTATCAGTCACTATGGCTATTGGTTCTCATAGGCTATCCCAGCAGGGTGCTATCACAAAGAGAATGA TGCAACAGATGGCGCTAGACTGAAGGAGAAGGAAACAGAAAGTAGCAGCAATGGCGGAAGACCGGGCCTGCAGGAGAACCAAGAATCTCGCTCCTCCGCTCCTCCGCTCATTCCGATCAAGATCTCTCAAAAACATCCCTATAAAAGCACCTTACTCCTCCTCACTTCAACACAACAAGAAAAACCAAAAAAAGAATAAAACCATTAACCATTTTCCCCCCCCCGCCCAACCTCGATTTGAAGGAACCTGATGGCGCTTCATTAATCTATACTTATGGAAAATCGAAAACACTGATTTCACCAAAAACTCTCTCCGTTTTCTTTTTCGTTGCTATAATCATATATATTTTCTTCTGTTTCCTTCTTTATATATCTCAAAATGACCGACATCAGCTTAGAGGAGATCAAGAATGAGAACGTCGATCTTGAGCGTATACCCGTTGAGGAAGTGTTTGAACAACTGAAATGTACCCGAGAGGGTTTGTCCTCAGAGGAGGGGCGCCAAAGGCTTCAACTCTTTGGCCCAAATAAGCTTGAAGAGAAGAAGGAAAGTAAATTTCTCAAGTTTCTGGGGTTTATGTGGAATCCACTTTCGTGGGTTATGGAAGCTGCTGCTATCATGGCGATTGTTCTTGCCAATGGAGGGGGGCAACCACCCGACTGGCAAGATTTTGTGGGAGATGTGATCAGCGTTAAGTTAGGAGATATCATTCCAGCCGATGCTCGTTTGTTGGAAGGCGATCCGCTGAAGATTGATCAGTCGGCACTTACCGGTGAGTCTTTACCAGTGACAAGGAGCTCTGGTGATGAAGTGTTTTCTGGTTCCACTGTAAAGCAAGGGGAGATCGAGGCTGTTGTAATTGCCACTGGTGTCCACACCTTCTTTGGGAAGGCTGCTCACTTGGTTGATAGCACAAATCAAGTGGGTCATTTCCAAAAGGTGTTGACTGCCATTGGAAACTTCTGCATTTGCTCCATCGCCGTAGGGATGGTGATAGAAATAGTAGTGATGTACCCAATTCAACATCGTAGATATCGAGATGGCTATCCCAGCAGGGTGCTATCACAAAGAGAATGA ATGACCGACATCAGCTTAGAGGAGATCAAGAATGAGAACGTCGATCTTGAGCGTATACCCGTTGAGGAAGTGTTTGAACAACTGAAATGTACCCGAGAGGGTTTGTCCTCAGAGGAGGGGCGCCAAAGGCTTCAACTCTTTGGCCCAAATAAGCTTGAAGAGAAGAAGGAAAGTAAATTTCTCAAGTTTCTGGGGTTTATGTGGAATCCACTTTCGTGGGTTATGGAAGCTGCTGCTATCATGGCGATTGTTCTTGCCAATGGAGGGGGGCAACCACCCGACTGGCAAGATTTTGTGGGAGATGTGATCAGCGTTAAGTTAGGAGATATCATTCCAGCCGATGCTCGTTTGTTGGAAGGCGATCCGCTGAAGATTGATCAGTCGGCACTTACCGGTGAGTCTTTACCAGTGACAAGGAGCTCTGGTGATGAAGTGTTTTCTGGTTCCACTGTAAAGCAAGGGGAGATCGAGGCTGTTGTAATTGCCACTGGTGTCCACACCTTCTTTGGGAAGGCTGCTCACTTGGTTGATAGCACAAATCAAGTGGGTCATTTCCAAAAGGTGTTGACTGCCATTGGAAACTTCTGCATTTGCTCCATCGCCGTAGGGATGGTGATAGAAATAGTAGTGATGTACCCAATTCAACATCGTAGATATCGAGATGGCTATCCCAGCAGGGTGCTATCACAAAGAGAATGA MTDISLEEIKNENVDLERIPVEEVFEQLKCTREGLSSEEGRQRLQLFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIVLANGGGQPPDWQDFVGDVISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTRSSGDEVFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMVIEIVVMYPIQHRRYRDGYPSRVLSQRE
BLAST of Cp4.1LG03g13510 vs. Swiss-Prot
Match: PMAX_ARATH (Putative ATPase, plasma membrane-like OS=Arabidopsis thaliana GN=At4g11730 PE=3 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 1.4e-63 Identity = 138/272 (50.74%), Postives = 178/272 (65.44%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. Swiss-Prot
Match: PMA8_ARATH (ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=3 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 5.3e-63 Identity = 152/274 (55.47%), Postives = 175/274 (63.87%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. Swiss-Prot
Match: PMA1_SOLLC (Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.6e-59 Identity = 120/155 (77.42%), Postives = 130/155 (83.87%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. Swiss-Prot
Match: PMA3_NICPL (Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.6e-59 Identity = 120/155 (77.42%), Postives = 131/155 (84.52%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. Swiss-Prot
Match: PMA4_NICPL (Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 2.1e-59 Identity = 111/123 (90.24%), Postives = 120/123 (97.56%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. TrEMBL
Match: A0A0E0DPV7_9ORYZ (Plasma membrane ATPase OS=Oryza meridionalis PE=3 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 4.4e-96 Identity = 179/238 (75.21%), Postives = 200/238 (84.03%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. TrEMBL
Match: A0A0E0DPV9_9ORYZ (Plasma membrane ATPase OS=Oryza meridionalis PE=3 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 4.4e-96 Identity = 179/238 (75.21%), Postives = 200/238 (84.03%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. TrEMBL
Match: V4NA43_EUTSA (Plasma membrane ATPase OS=Eutrema salsugineum GN=EUTSA_v10015530mg PE=3 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 2.8e-95 Identity = 180/237 (75.95%), Postives = 200/237 (84.39%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. TrEMBL
Match: A0A0L9UGM5_PHAAN (Plasma membrane ATPase OS=Phaseolus angularis GN=LR48_Vigan04g210100 PE=3 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 3.1e-94 Identity = 182/238 (76.47%), Postives = 199/238 (83.61%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. TrEMBL
Match: A0A0E0DPW0_9ORYZ (Plasma membrane ATPase OS=Oryza meridionalis PE=3 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 3.5e-93 Identity = 179/252 (71.03%), Postives = 200/252 (79.37%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. TAIR10
Match: AT4G11730.1 (AT4G11730.1 Cation transporter/ E1-E2 ATPase family protein) HSP 1 Score: 244.2 bits (622), Expect = 7.9e-65 Identity = 138/272 (50.74%), Postives = 178/272 (65.44%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. TAIR10
Match: AT3G42640.1 (AT3G42640.1 H(+)-ATPase 8) HSP 1 Score: 242.3 bits (617), Expect = 3.0e-64 Identity = 152/274 (55.47%), Postives = 175/274 (63.87%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. TAIR10
Match: AT3G47950.1 (AT3G47950.1 H(+)-ATPase 4) HSP 1 Score: 228.0 bits (580), Expect = 5.9e-60 Identity = 119/155 (76.77%), Postives = 131/155 (84.52%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. TAIR10
Match: AT4G30190.2 (AT4G30190.2 H(+)-ATPase 2) HSP 1 Score: 227.3 bits (578), Expect = 1.0e-59 Identity = 110/123 (89.43%), Postives = 118/123 (95.93%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. TAIR10
Match: AT2G18960.1 (AT2G18960.1 H(+)-ATPase 1) HSP 1 Score: 226.5 bits (576), Expect = 1.7e-59 Identity = 109/123 (88.62%), Postives = 118/123 (95.93%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. NCBI nr
Match: gi|567178134|ref|XP_006401213.1| (hypothetical protein EUTSA_v10015530mg [Eutrema salsugineum]) HSP 1 Score: 356.3 bits (913), Expect = 4.1e-95 Identity = 180/237 (75.95%), Postives = 200/237 (84.39%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. NCBI nr
Match: gi|920698678|gb|KOM41903.1| (hypothetical protein LR48_Vigan04g210100 [Vigna angularis]) HSP 1 Score: 352.8 bits (904), Expect = 4.5e-94 Identity = 182/238 (76.47%), Postives = 199/238 (83.61%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. NCBI nr
Match: gi|700197757|gb|KGN52915.1| (hypothetical protein Csa_4G006220 [Cucumis sativus]) HSP 1 Score: 343.2 bits (879), Expect = 3.6e-91 Identity = 182/222 (81.98%), Postives = 193/222 (86.94%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. NCBI nr
Match: gi|413943528|gb|AFW76177.1| (hypothetical protein ZEAMMB73_418989 [Zea mays]) HSP 1 Score: 342.0 bits (876), Expect = 7.9e-91 Identity = 172/225 (76.44%), Postives = 194/225 (86.22%), Query Frame = 1
BLAST of Cp4.1LG03g13510 vs. NCBI nr
Match: gi|1012002220|ref|XP_015934093.1| (PREDICTED: LOW QUALITY PROTEIN: plasma membrane ATPase 4 [Arachis duranensis]) HSP 1 Score: 314.3 bits (804), Expect = 1.8e-82 Identity = 163/241 (67.63%), Postives = 184/241 (76.35%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |