Cp4.1LG03g12510 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g12510
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionFar-red impaired responsive (FAR1) family protein
LocationCp4.1LG03 : 10242618 .. 10244594 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTTTTTCTGAAAACGGTTTGGTTGTTGATTGCAGTGGAATTTGGGGTTGATGGTGATAGTGAAGTGGTGGGAAATTCGACTCTGGTGGATAGTAAACCTCTCGATGAAAACGAAACAGGTGTAAGTTCTATAGAAAGGATATTCGATGAGGACCGAGACGAGAAAATAATACAAGATTCATCTGGAAGGAATGCCATTTTGGATTCAGTTCCTGGATTGCCAATAGTTCAAGCAGATGAGCCCTATGTTGGTCAGGAATTTGAAAATGAGGCAGCAGCTCATGCATTTTACAATGCTTATGCTACACGTGTGGGGTTCGTAATTCGTGTTAGCAAGCTTTCACGATCGAGACGTGATGGGACGGCTATTGGTCGAGCACTAGTCTGCAACAAAGAGGGGTACAGGATGCCTGACAAGCGGGAAAAGATCGTGAGGCAGAGGGCCGAGACGAGGGTAGGTTGCAGGGCAATGATTTTGGTGAGAAAAGTGAACTCTGGCAAATGGGTTGTCACTAAATTTGTGAAGGAACATACTCATCCTTTGTCACCTGGGAAAGGTCGAAGGGATTGCATATATGATCAATATCCTGTAAGTTCTTCTTCCATACACCAATGTTCAAATCCTGATGCACTAACACATGTTCTGACAAAATGAGATTCTCTTTGAAACCAGAATTTTGTTTATCTTTGTTGCTTTATTTGGGGTCTGGTTCAATTGTTAATCATCTGTTTGTATATATTACTCTGGGGAAATGGTGGGAGATGAAGGGAAATCCTCGAACGATTGTCGGTTTCTTGTTCATAGAAGATTTAGTAAGCTAGTGCTCACGATCCATGTCTCAAGGAGACACCGAGAATCTTTGTTAATCCTTCGAGATTGGAAGGGCGGTGCTTCAGTAGTTTTCTTTGGGAGGCGGCCCTCACTCCCTCCCCCCATCCCAAGCCCACTGTTAGTAGATATTATCTGTTTTGGCCCGTTACGTATCGTTGTCAGTCTCACAGTTTTAAAACGAGTCTGTTAGGGAGAGGTTTCCATACCCTTATAAGGAATGCTTCGTTCCTCTCTTCAGCTTTTAACTTGTAAGTATGTTACATCTTATGTGAGGTGGAGGCATTCGGAACTGCTGAGCTAAGCTCGTGATGGCACTTTTGGCTTCTTTTATAAGTACTGTGAGATTCCATATTGGTTGGAGAGGAGAACGAAGCATTCTTTGTAAGAGTGTAGAAACATGTCTCTAAAAGACGCGTTTTGAACCGTGAGGCTGATGGCGATACGTAATGGGCCAAATCAAACAATATTTACTAACAGTGGGCTTGGACTGTTACAAATGGTATTAGAGCCAGACACTGAGTGGTGTGCTAGTGAGGACGTTGGGCCACCAAGGGGAGGTGGATTATGAGATCTCACATCGGTTGGAGAGGGGAACAAAGCATTTCTTATAAGAGTGTGGAAACCTCTCCCTACTAGACGTGTTTTAAAATTGTGAGACTGACAGCGATACATAACAGGCCAAATCATCTACTAGCGGTAGGCTTAGACGGTTACGAATACCATCCTTTCAAACATCAGAGGTTTTAAATCATAAAACAACTCGTTCTTTCCTTGACTGACAAGAAGCACTATGTTGATGGTGCTATTAGAGAGCTCAATTATATGACTGGTTCTCATACTCTCTTGAAGTTTTACACTTCTTAGTGTTATATACTAATGGTAAATGGCTTATAACAGTGCATTCATTGTATTACTCACTCAACTTTTGCCATCCTTGCATTGCAGAACGAACACGATAAGATACGCGAACTGTCTCAGCAGCTTGCTATTGAGAAAAAGCGATCGGCGACATATAAAAGGCATCTAGAAGTAATATTCGAATACATCGACGAGCATAACGATAACCTGTCGAGAAAGATCCAACATATAGTAGACAATGTGAAGGAGATGGAAAGCATAGAACAGCAGAGTCATAGATAG

mRNA sequence

ATGGCGTTTTTTCTGAAAACGGTTTGGTTGTTGATTGCAGTGGAATTTGGGGTTGATGGTGATAGTGAAGTGGTGGGAAATTCGACTCTGGTGGATAGTAAACCTCTCGATGAAAACGAAACAGGTGTAAGTTCTATAGAAAGGATATTCGATGAGGACCGAGACGAGAAAATAATACAAGATTCATCTGGAAGGAATGCCATTTTGGATTCAGTTCCTGGATTGCCAATAGTTCAAGCAGATGAGCCCTATGTTGGTCAGGAATTTGAAAATGAGGCAGCAGCTCATGCATTTTACAATGCTTATGCTACACGTGTGGGGTTCGTAATTCGTGTTAGCAAGCTTTCACGATCGAGACGTGATGGGACGGCTATTGGTCGAGCACTAGTCTGCAACAAAGAGGGGTACAGGATGCCTGACAAGCGGGAAAAGATCGTGAGGCAGAGGGCCGAGACGAGGGTAGGTTGCAGGGCAATGATTTTGGTGAGAAAAGTGAACTCTGGCAAATGGGTTGTCACTAAATTTGTGAAGGAACATACTCATCCTTTGTCACCTGGGAAAGGTCGAAGGGATTGCATATATGATCAATATCCTAACGAACACGATAAGATACGCGAACTGTCTCAGCAGCTTGCTATTGAGAAAAAGCGATCGGCGACATATAAAAGGCATCTAGAAGTAATATTCGAATACATCGACGAGCATAACGATAACCTGTCGAGAAAGATCCAACATATAGTAGACAATGTGAAGGAGATGGAAAGCATAGAACAGCAGAGTCATAGATAG

Coding sequence (CDS)

ATGGCGTTTTTTCTGAAAACGGTTTGGTTGTTGATTGCAGTGGAATTTGGGGTTGATGGTGATAGTGAAGTGGTGGGAAATTCGACTCTGGTGGATAGTAAACCTCTCGATGAAAACGAAACAGGTGTAAGTTCTATAGAAAGGATATTCGATGAGGACCGAGACGAGAAAATAATACAAGATTCATCTGGAAGGAATGCCATTTTGGATTCAGTTCCTGGATTGCCAATAGTTCAAGCAGATGAGCCCTATGTTGGTCAGGAATTTGAAAATGAGGCAGCAGCTCATGCATTTTACAATGCTTATGCTACACGTGTGGGGTTCGTAATTCGTGTTAGCAAGCTTTCACGATCGAGACGTGATGGGACGGCTATTGGTCGAGCACTAGTCTGCAACAAAGAGGGGTACAGGATGCCTGACAAGCGGGAAAAGATCGTGAGGCAGAGGGCCGAGACGAGGGTAGGTTGCAGGGCAATGATTTTGGTGAGAAAAGTGAACTCTGGCAAATGGGTTGTCACTAAATTTGTGAAGGAACATACTCATCCTTTGTCACCTGGGAAAGGTCGAAGGGATTGCATATATGATCAATATCCTAACGAACACGATAAGATACGCGAACTGTCTCAGCAGCTTGCTATTGAGAAAAAGCGATCGGCGACATATAAAAGGCATCTAGAAGTAATATTCGAATACATCGACGAGCATAACGATAACCTGTCGAGAAAGATCCAACATATAGTAGACAATGTGAAGGAGATGGAAAGCATAGAACAGCAGAGTCATAGATAG

Protein sequence

MAFFLKTVWLLIAVEFGVDGDSEVVGNSTLVDSKPLDENETGVSSIERIFDEDRDEKIIQDSSGRNAILDSVPGLPIVQADEPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGKGRRDCIYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIDEHNDNLSRKIQHIVDNVKEMESIEQQSHR
Homology
[Close]
BLAST of Cp4.1LG03g12510 vs. Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.5e-25
Identity = 62/108 (57.41%), Postives = 74/108 (68.52%), Query Frame = 1 

Query: 82  EPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYR-MPD 141
           EPY G EFE+E AA AFYN+YA R+GF  RVS   RSRRDG  I R  VC KEG+R M +
Sbjct: 72  EPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNE 131

Query: 142 KREK---IVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSP 186
           KR K   I R R  TRVGC+A + V+  +SGKW+V+ FVK+H H L P
Sbjct: 132 KRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVP 179

[Close]
BLAST of Cp4.1LG03g12510 vs. Swiss-Prot
Match: FRS12_ARATH (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.7e-18
Identity = 48/107 (44.86%), Postives = 63/107 (58.88%), Query Frame = 1 

Query: 82  EPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDK 141
           EPYVG EF+    A  FYNAYA R GF +R  +L RSR DGT   R  VC+KEG+++   
Sbjct: 42  EPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQL--- 101

Query: 142 REKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGKG 189
                     +R GC A I V++ ++GKWV+ +  KEH H L  G+G
Sbjct: 102 ---------NSRTGCTAFIRVQRRDTGKWVLDQIQKEHNHELG-GEG 135

[Close]
BLAST of Cp4.1LG03g12510 vs. Swiss-Prot
Match: FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 7.7e-18
Identity = 45/102 (44.12%), Postives = 61/102 (59.80%), Query Frame = 1 

Query: 82  EPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDK 141
           EPYVG EF+    A  +YN+YATR GF +R  +L RSR DGT   R  VC+KEG+++   
Sbjct: 27  EPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQL--- 86

Query: 142 REKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPL 184
                     +R GC A I V++ ++GKWV+ +  KEH H L
Sbjct: 87  ---------NSRTGCPAFIRVQRRDTGKWVLDQIQKEHNHDL 116

[Close]
BLAST of Cp4.1LG03g12510 vs. Swiss-Prot
Match: FRS6_ARATH (Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.5e-13
Identity = 58/181 (32.04%), Postives = 88/181 (48.62%), Query Frame = 1 

Query: 21  DSEVVGNSTLVDSKPLDENETGVSSIERIFDEDRDEKIIQDSSGRNAILDSVPGLPIVQA 80
           D+  +G   LV S    E+E  V      F ++ + K  +++ G     D   GL + + 
Sbjct: 31  DTLRIGEEALVCSS---EHEIDVG-----FCQNEERKSEEETMGG---FDEQSGLLVDER 90

Query: 81  ---DEPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYR 140
              D P VG EFE+   A+ +YN YA+ VGF +RV      RR     G  L C+ +G++
Sbjct: 91  KEFDAPAVGMEFESYDDAYNYYNCYASEVGFRVRVKNSWFKRRSKEKYGAVLCCSSQGFK 150

Query: 141 MPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPL-----SPGKGRRDC 194
              +   + R R ETR GC AMI +R+V+S +W V +   +H H L        K +R C
Sbjct: 151 ---RINDVNRVRKETRTGCPAMIRMRQVDSKRWRVVEVTLDHNHLLGCKLYKSVKRKRKC 197

[Close]
BLAST of Cp4.1LG03g12510 vs. Swiss-Prot
Match: FRS1_ARATH (Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=FRS1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-12
Identity = 45/151 (29.80%), Postives = 68/151 (45.03%), Query Frame = 1 

Query: 86  GQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCNK------------ 145
           G+EFE++  A  FY  YA  VGF   +    RSR  G  I    VC +            
Sbjct: 24  GREFESKEEAFEFYKEYANSVGFTTIIKASRRSRMTGKFIDAKFVCTRYGSKKEDIDTGL 83

Query: 146 --EGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGKGRRD 205
             +G+ +P  R++    R+ ++  C+A + V++   G+WVV   VKEH H +  G+    
Sbjct: 84  GTDGFNIPQARKRGRINRSSSKTDCKAFLHVKRRQDGRWVVRSLVKEHNHEIFTGQA--- 143

Query: 206 CIYDQYPNEHDKIRELSQQLAIEKKRSATYK 223
                     D +RELS +  +EK   A  K
Sbjct: 144 ----------DSLRELSGRRKLEKLNGAIVK 161

[Close]
BLAST of Cp4.1LG03g12510 vs. TrEMBL
Match: A0A0A0KZ37_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G017090 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 1.4e-130
Identity = 239/251 (95.22%), Postives = 249/251 (99.20%), Query Frame = 1 

Query: 13  AVEFGVDGDSEVVGNSTLV-DSKPLDENETGVSSIERIFDEDRDEKIIQDSSGRNAILDS 72
           A+EFGVDGDSEVVGNSTLV DSKPLDENETGVSSIERIFD+D+DEKIIQDS+GRNAILDS
Sbjct: 20  ALEFGVDGDSEVVGNSTLVEDSKPLDENETGVSSIERIFDQDQDEKIIQDSTGRNAILDS 79

Query: 73  VPGLPIVQADEPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVC 132
           VPGLPIVQADEPYVGQEFENEAAAHAFYN+YATRVGFVIRVSKLSRSRRDGTAIGRALVC
Sbjct: 80  VPGLPIVQADEPYVGQEFENEAAAHAFYNSYATRVGFVIRVSKLSRSRRDGTAIGRALVC 139

Query: 133 NKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGKGRRD 192
           NKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGK RRD
Sbjct: 140 NKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGKARRD 199

Query: 193 CIYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIDEHNDNLSRKIQHIVDNVK 252
           CIYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYI+EHND+LSRKIQHIVDNVK
Sbjct: 200 CIYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIEEHNDSLSRKIQHIVDNVK 259

Query: 253 EMESIEQQSHR 263
           E+ES+EQQ+HR
Sbjct: 260 ELESVEQQNHR 270

[Close]
BLAST of Cp4.1LG03g12510 vs. TrEMBL
Match: W9RTC0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024756 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.8e-106
Identity = 202/262 (77.10%), Postives = 233/262 (88.93%), Query Frame = 1 

Query: 4   FLKTVWLLIAVEFGVDGD--SEVVGNSTLVD-SKPLDENETGVSSIERIFDEDRDEKIIQ 63
           F+K  +L++AVEFGVDGD   +++ NS  V+ S+  D+NETG SS+E  F +D+ EK+ Q
Sbjct: 9   FMKGNFLIVAVEFGVDGDVNGDILRNSVEVETSRGGDDNETGGSSVEGAFQQDQHEKMDQ 68

Query: 64  DSSGRNAILDSVPGLPIVQADEPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRR 123
           DSSG + I   VP   +VQADEPYVGQEFE+EA+AHAFYNAYATR+GFVIRVSKLSRSRR
Sbjct: 69  DSSGIDIIPVGVPATSVVQADEPYVGQEFESEASAHAFYNAYATRIGFVIRVSKLSRSRR 128

Query: 124 DGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHT 183
           DG+AIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKV+SGKWVVTKFVKEHT
Sbjct: 129 DGSAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHT 188

Query: 184 HPLSPGKGRRDCIYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIDEHNDNLS 243
           HPL+PGKGRRDCIYDQYPNEHDKIRELSQQLAIEKKR+ATYKRHLE+IFE+I+EHN++LS
Sbjct: 189 HPLTPGKGRRDCIYDQYPNEHDKIRELSQQLAIEKKRAATYKRHLELIFEHIEEHNESLS 248

Query: 244 RKIQHIVDNVKEMESIEQQSHR 263
            KIQHIVD+VK ME+ E+QS R
Sbjct: 249 NKIQHIVDSVKGMETKEEQSRR 270

[Close]
BLAST of Cp4.1LG03g12510 vs. TrEMBL
Match: A0A0S3SFZ5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G039800 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 3.2e-103
Identity = 195/257 (75.88%), Postives = 223/257 (86.77%), Query Frame = 1 

Query: 12  IAVEFGVDG--DSEVVGNSTLVD----SKPLDENETGVSSIERIFDEDRDEKIIQDSSGR 71
           I +EFG+DG  + E VGN TL      S P DEN+ G SS    +  D D+ I QDSSG 
Sbjct: 33  ILMEFGIDGSINGETVGNVTLGQINSCSTP-DENKVGCSSFNPAYKHDHDDNITQDSSGG 92

Query: 72  NAILDSVPGLPIVQADEPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAI 131
           + I   +P + +V ADEPYVGQEF++EAAAHAFYNAYATRVGF+IRVSKLSRSRRDG+AI
Sbjct: 93  DTIPSGIPAVSVVSADEPYVGQEFDSEAAAHAFYNAYATRVGFIIRVSKLSRSRRDGSAI 152

Query: 132 GRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSP 191
           GRALVCN+EGYRMPDKREKIVRQRAETRVGCRAMILVRKV+SGKWVVTKF++EHTHPL+P
Sbjct: 153 GRALVCNREGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFIQEHTHPLTP 212

Query: 192 GKGRRDCIYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIDEHNDNLSRKIQH 251
           GKGRRDCIY+QYPNEHDKIRELSQQLAIEKKRSATYKRHLE+IFE+I+EHN++LS+KIQH
Sbjct: 213 GKGRRDCIYEQYPNEHDKIRELSQQLAIEKKRSATYKRHLELIFEHIEEHNESLSKKIQH 272

Query: 252 IVDNVKEMESIEQQSHR 263
           IVD+VKEME+ EQQSHR
Sbjct: 273 IVDSVKEMETKEQQSHR 288

[Close]
BLAST of Cp4.1LG03g12510 vs. TrEMBL
Match: V7BZA2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G153200g PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 3.9e-101
Identity = 190/258 (73.64%), Postives = 218/258 (84.50%), Query Frame = 1 

Query: 10  LLIAVEFGVDG--DSEVVGNSTLVD---SKPLDENETGVSSIERIFDEDRDEKIIQDSSG 69
           L   VEFG+DG  + E VGN T+         DEN+ G SS    +  D D+ I QDSSG
Sbjct: 2   LCFTVEFGIDGSINGETVGNVTVGQINCCSTADENKVGCSSFNPAYKHDHDDNITQDSSG 61

Query: 70  RNAILDSVPGLPIVQADEPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTA 129
            + I   +P + +V ADEPYVGQEF++EAAAHAFYNAYATRVGF+IRVSKLSRSRRDG+A
Sbjct: 62  GDTIPSGIPAVSVVSADEPYVGQEFDSEAAAHAFYNAYATRVGFIIRVSKLSRSRRDGSA 121

Query: 130 IGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLS 189
           IGRALVCN+EGYRMPDKREKIVRQRAETRVGCRAMILVRKV+SGKWVVTKF++EH HPL+
Sbjct: 122 IGRALVCNREGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFIQEHAHPLT 181

Query: 190 PGKGRRDCIYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIDEHNDNLSRKIQ 249
           PGKGRRDCIY+QYPNEHDKIRELSQQLAIEKKRSATYKRHLE+IFE+I+EHN++LS+KIQ
Sbjct: 182 PGKGRRDCIYEQYPNEHDKIRELSQQLAIEKKRSATYKRHLELIFEHIEEHNESLSKKIQ 241

Query: 250 HIVDNVKEMESIEQQSHR 263
           HIV+ VKEME+ EQQS R
Sbjct: 242 HIVERVKEMETKEQQSQR 259

[Close]
BLAST of Cp4.1LG03g12510 vs. TrEMBL
Match: V7BWP3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G153200g PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 6.6e-101
Identity = 189/256 (73.83%), Postives = 218/256 (85.16%), Query Frame = 1 

Query: 12  IAVEFGVDG--DSEVVGNSTLVD---SKPLDENETGVSSIERIFDEDRDEKIIQDSSGRN 71
           I +EFG+DG  + E VGN T+         DEN+ G SS    +  D D+ I QDSSG +
Sbjct: 33  ILMEFGIDGSINGETVGNVTVGQINCCSTADENKVGCSSFNPAYKHDHDDNITQDSSGGD 92

Query: 72  AILDSVPGLPIVQADEPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAIG 131
            I   +P + +V ADEPYVGQEF++EAAAHAFYNAYATRVGF+IRVSKLSRSRRDG+AIG
Sbjct: 93  TIPSGIPAVSVVSADEPYVGQEFDSEAAAHAFYNAYATRVGFIIRVSKLSRSRRDGSAIG 152

Query: 132 RALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPG 191
           RALVCN+EGYRMPDKREKIVRQRAETRVGCRAMILVRKV+SGKWVVTKF++EH HPL+PG
Sbjct: 153 RALVCNREGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFIQEHAHPLTPG 212

Query: 192 KGRRDCIYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIDEHNDNLSRKIQHI 251
           KGRRDCIY+QYPNEHDKIRELSQQLAIEKKRSATYKRHLE+IFE+I+EHN++LS+KIQHI
Sbjct: 213 KGRRDCIYEQYPNEHDKIRELSQQLAIEKKRSATYKRHLELIFEHIEEHNESLSKKIQHI 272

Query: 252 VDNVKEMESIEQQSHR 263
           V+ VKEME+ EQQS R
Sbjct: 273 VERVKEMETKEQQSQR 288

[Close]
BLAST of Cp4.1LG03g12510 vs. TAIR10
Match: AT3G59470.1 (AT3G59470.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 300.8 bits (769), Expect = 8.1e-82
Identity = 153/235 (65.11%), Postives = 189/235 (80.43%), Query Frame = 1 

Query: 37  DENETGVSSIERIFDEDRDE-KIIQDSSGRN---AILDSVP----GLPIVQADEPYVGQE 96
           + NE G SS + + ++D D    + ++SG       LDS+P     +   Q DEPYVGQE
Sbjct: 16  NHNEMGESSGQAMIEQDDDNHNELGENSGEQDEKVDLDSIPLAVADMTEAQGDEPYVGQE 75

Query: 97  FENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKREKIVRQ 156
           FE+EAAAH FYNAYAT+VGFVIRVSKLSRSR DG+ IGR LVCNKEGYR+P KR+K++RQ
Sbjct: 76  FESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLPSKRDKVIRQ 135

Query: 157 RAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGKGRRDCIYDQYPNEHDKIRELS 216
           RAETRVGC+AMIL+RK NSGKWV+TKFVKEH H L PG+ RR CIYDQYPNEHDKI+EL 
Sbjct: 136 RAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLMPGRVRRGCIYDQYPNEHDKIQELM 195

Query: 217 QQLAIEKKRSATYKRHLEVIFEYIDEHNDNLSRKIQHIVDNVKEMESIE-QQSHR 263
           QQLA EKKR+ATYKRHLE++FE I++HN++LS++IQHIVDNV+ +E  + QQ+H+
Sbjct: 196 QQLAAEKKRAATYKRHLEMLFEQIEQHNESLSKRIQHIVDNVRNLEQRDHQQNHQ 250

[Close]
BLAST of Cp4.1LG03g12510 vs. TAIR10
Match: AT3G07500.1 (AT3G07500.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 154.8 bits (390), Expect = 7.1e-38
Identity = 86/207 (41.55%), Postives = 136/207 (65.70%), Query Frame = 1 

Query: 53  DRDEKIIQDSSGRNAILDSVPGLPIVQADEPYVGQEFENEAAAHAFYNAYATRVGFVIRV 112
           + D +++++S     + D     P+V   EP++G EFE+E AA +FY+ YAT +GFV+RV
Sbjct: 8   EEDVEMMENSDVMKTVTDEAS--PMV---EPFIGMEFESEEAAKSFYDNYATCMGFVMRV 67

Query: 113 SKLSRSRRDGTAIGRALVCNKEGYRMP-DKREKIVRQRAETRVGCRAMILVRKVNSGKWV 172
               RS RDGT + R LVCNKEG+R    +R +  + RA TR GC+A+I+V++  SG W+
Sbjct: 68  DAFRRSMRDGTVVWRRLVCNKEGFRRSRPRRSESRKPRAITREGCKALIVVKREKSGTWL 127

Query: 173 VTKFVKEHTHPLSP--GKGRRDCIYDQYPNEHD-KIRELSQQLAIEKKRSATYKRHLEVI 232
           VTKF KEH HPL P     RR+    Q P+E D KIRELS +L+ E++R    ++ L+++
Sbjct: 128 VTKFEKEHNHPLLPLSPNVRRNFQLPQTPDEKDAKIRELSAELSRERRRCTALQQQLDMV 187

Query: 233 FEYIDEHNDNLSRKIQHIVDNVKEMES 256
            + ++EH+++L+  I  ++ +V+++ES
Sbjct: 188 LKEMEEHSNHLTININSVIQSVRDIES 209

[Close]
BLAST of Cp4.1LG03g12510 vs. TAIR10
Match: AT2G43280.1 (AT2G43280.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 133.7 bits (335), Expect = 1.7e-31
Identity = 77/183 (42.08%), Postives = 114/183 (62.30%), Query Frame = 1 

Query: 80  ADEPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGY--R 139
           A EP  G  FE+E AA  FY+ Y+ R+GFV+RV    RS +DG  + R   CNKEG+   
Sbjct: 19  AIEPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVS 78

Query: 140 MPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPL--SPGKGRRDCIYD 199
           +  K   + + R  TR GC+AMI V+   SGKWV+TKFVKEH HPL  SP + R      
Sbjct: 79  IRGKFGSVRKPRPSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARHTL--- 138

Query: 200 QYPNEHDK-IRELSQQLAIEKKRSATYKRHLEVIFEYIDEHNDNLSRKIQHIVDNVKEME 258
              +E DK I+EL+ +L  +K+  A YK  L+   + ++EH++ +++K++++V+N+KE E
Sbjct: 139 ---DEKDKRIQELTIELRNKKRLCAAYKEQLDAFAKIVEEHSNQIAKKVENVVNNLKEFE 195

[Close]
BLAST of Cp4.1LG03g12510 vs. TAIR10
Match: AT4G12850.1 (AT4G12850.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 125.2 bits (313), Expect = 6.1e-29
Identity = 66/177 (37.29%), Postives = 108/177 (61.02%), Query Frame = 1 

Query: 78  VQADEPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYR 137
           ++ DEPYVG +FE+E  A  FY  Y+ R+GFV+R+ +  RS  DG  + R L CNK+G+ 
Sbjct: 5   LKLDEPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQGFG 64

Query: 138 MPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGKGRRDCIYDQY 197
             ++R       + +R GC+A ILV+   SGKWVVT+F+KEH H L   +      YD +
Sbjct: 65  PNNQRSS--SSSSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSL---QFIGSSSYDSF 124

Query: 198 PNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIDEHNDNLSRKIQHIVDNVKEME 255
            ++  KI+EL++++  + +    Y+  L    + ++ + + LS K++ IV+NVK++E
Sbjct: 125 ADKERKIKELTEEIECQDRLCDVYRDRLVSFIDNVEHYTEELSLKVRDIVENVKKLE 176

[Close]
BLAST of Cp4.1LG03g12510 vs. TAIR10
Match: AT4G38180.1 (AT4G38180.1 FAR1-related sequence 5)

HSP 1 Score: 115.9 bits (289), Expect = 3.7e-26
Identity = 62/108 (57.41%), Postives = 74/108 (68.52%), Query Frame = 1 

Query: 82  EPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYR-MPD 141
           EPY G EFE+E AA AFYN+YA R+GF  RVS   RSRRDG  I R  VC KEG+R M +
Sbjct: 72  EPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNE 131

Query: 142 KREK---IVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSP 186
           KR K   I R R  TRVGC+A + V+  +SGKW+V+ FVK+H H L P
Sbjct: 132 KRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVP 179

[Close]
BLAST of Cp4.1LG03g12510 vs. NCBI nr
Match: gi|700197963|gb|KGN53121.1| (hypothetical protein Csa_4G017090 [Cucumis sativus])

HSP 1 Score: 473.8 bits (1218), Expect = 2.0e-130
Identity = 239/251 (95.22%), Postives = 249/251 (99.20%), Query Frame = 1 

Query: 13  AVEFGVDGDSEVVGNSTLV-DSKPLDENETGVSSIERIFDEDRDEKIIQDSSGRNAILDS 72
           A+EFGVDGDSEVVGNSTLV DSKPLDENETGVSSIERIFD+D+DEKIIQDS+GRNAILDS
Sbjct: 20  ALEFGVDGDSEVVGNSTLVEDSKPLDENETGVSSIERIFDQDQDEKIIQDSTGRNAILDS 79

Query: 73  VPGLPIVQADEPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVC 132
           VPGLPIVQADEPYVGQEFENEAAAHAFYN+YATRVGFVIRVSKLSRSRRDGTAIGRALVC
Sbjct: 80  VPGLPIVQADEPYVGQEFENEAAAHAFYNSYATRVGFVIRVSKLSRSRRDGTAIGRALVC 139

Query: 133 NKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGKGRRD 192
           NKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGK RRD
Sbjct: 140 NKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGKARRD 199

Query: 193 CIYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIDEHNDNLSRKIQHIVDNVK 252
           CIYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYI+EHND+LSRKIQHIVDNVK
Sbjct: 200 CIYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIEEHNDSLSRKIQHIVDNVK 259

Query: 253 EMESIEQQSHR 263
           E+ES+EQQ+HR
Sbjct: 260 ELESVEQQNHR 270

[Close]
BLAST of Cp4.1LG03g12510 vs. NCBI nr
Match: gi|449468756|ref|XP_004152087.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 6 [Cucumis sativus])

HSP 1 Score: 472.2 bits (1214), Expect = 5.7e-130
Identity = 238/250 (95.20%), Postives = 248/250 (99.20%), Query Frame = 1 

Query: 14  VEFGVDGDSEVVGNSTLV-DSKPLDENETGVSSIERIFDEDRDEKIIQDSSGRNAILDSV 73
           +EFGVDGDSEVVGNSTLV DSKPLDENETGVSSIERIFD+D+DEKIIQDS+GRNAILDSV
Sbjct: 1   MEFGVDGDSEVVGNSTLVEDSKPLDENETGVSSIERIFDQDQDEKIIQDSTGRNAILDSV 60

Query: 74  PGLPIVQADEPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCN 133
           PGLPIVQADEPYVGQEFENEAAAHAFYN+YATRVGFVIRVSKLSRSRRDGTAIGRALVCN
Sbjct: 61  PGLPIVQADEPYVGQEFENEAAAHAFYNSYATRVGFVIRVSKLSRSRRDGTAIGRALVCN 120

Query: 134 KEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGKGRRDC 193
           KEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGK RRDC
Sbjct: 121 KEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGKARRDC 180

Query: 194 IYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIDEHNDNLSRKIQHIVDNVKE 253
           IYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYI+EHND+LSRKIQHIVDNVKE
Sbjct: 181 IYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIEEHNDSLSRKIQHIVDNVKE 240

Query: 254 MESIEQQSHR 263
           +ES+EQQ+HR
Sbjct: 241 LESVEQQNHR 250

[Close]
BLAST of Cp4.1LG03g12510 vs. NCBI nr
Match: gi|659107943|ref|XP_008453933.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 6 [Cucumis melo])

HSP 1 Score: 471.9 bits (1213), Expect = 7.5e-130
Identity = 237/250 (94.80%), Postives = 248/250 (99.20%), Query Frame = 1 

Query: 14  VEFGVDGDSEVVGNSTLV-DSKPLDENETGVSSIERIFDEDRDEKIIQDSSGRNAILDSV 73
           +EFGVDGDSEVVGNSTLV DSKPLDENETGVSSIERIFD+D+DEKIIQDS+GRNAILDSV
Sbjct: 1   MEFGVDGDSEVVGNSTLVEDSKPLDENETGVSSIERIFDQDQDEKIIQDSTGRNAILDSV 60

Query: 74  PGLPIVQADEPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCN 133
           PGLP+VQADEPYVGQEFENEAAAHAFYN+YATRVGFVIRVSKLSRSRRDGTAIGRALVCN
Sbjct: 61  PGLPVVQADEPYVGQEFENEAAAHAFYNSYATRVGFVIRVSKLSRSRRDGTAIGRALVCN 120

Query: 134 KEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGKGRRDC 193
           KEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGK RRDC
Sbjct: 121 KEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGKARRDC 180

Query: 194 IYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIDEHNDNLSRKIQHIVDNVKE 253
           IYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYI+EHND+LSRKIQHIVDNVKE
Sbjct: 181 IYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIEEHNDSLSRKIQHIVDNVKE 240

Query: 254 MESIEQQSHR 263
           +ES+EQQ+HR
Sbjct: 241 LESVEQQNHR 250

[Close]
BLAST of Cp4.1LG03g12510 vs. NCBI nr
Match: gi|703102737|ref|XP_010097543.1| (hypothetical protein L484_024756 [Morus notabilis])

HSP 1 Score: 393.7 bits (1010), Expect = 2.6e-106
Identity = 202/262 (77.10%), Postives = 233/262 (88.93%), Query Frame = 1 

Query: 4   FLKTVWLLIAVEFGVDGD--SEVVGNSTLVD-SKPLDENETGVSSIERIFDEDRDEKIIQ 63
           F+K  +L++AVEFGVDGD   +++ NS  V+ S+  D+NETG SS+E  F +D+ EK+ Q
Sbjct: 9   FMKGNFLIVAVEFGVDGDVNGDILRNSVEVETSRGGDDNETGGSSVEGAFQQDQHEKMDQ 68

Query: 64  DSSGRNAILDSVPGLPIVQADEPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRR 123
           DSSG + I   VP   +VQADEPYVGQEFE+EA+AHAFYNAYATR+GFVIRVSKLSRSRR
Sbjct: 69  DSSGIDIIPVGVPATSVVQADEPYVGQEFESEASAHAFYNAYATRIGFVIRVSKLSRSRR 128

Query: 124 DGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHT 183
           DG+AIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKV+SGKWVVTKFVKEHT
Sbjct: 129 DGSAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHT 188

Query: 184 HPLSPGKGRRDCIYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIDEHNDNLS 243
           HPL+PGKGRRDCIYDQYPNEHDKIRELSQQLAIEKKR+ATYKRHLE+IFE+I+EHN++LS
Sbjct: 189 HPLTPGKGRRDCIYDQYPNEHDKIRELSQQLAIEKKRAATYKRHLELIFEHIEEHNESLS 248

Query: 244 RKIQHIVDNVKEMESIEQQSHR 263
            KIQHIVD+VK ME+ E+QS R
Sbjct: 249 NKIQHIVDSVKGMETKEEQSRR 270

[Close]
BLAST of Cp4.1LG03g12510 vs. NCBI nr
Match: gi|1009139189|ref|XP_015886991.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 392.5 bits (1007), Expect = 5.8e-106
Identity = 200/252 (79.37%), Postives = 224/252 (88.89%), Query Frame = 1 

Query: 14  VEFGVDG--DSEVVGNSTLVD-SKPLDENETGVSSIERIFDEDRDEKIIQDSSGRNAILD 73
           +EFGVDG  + EV+ NS  +D S+  DENET  SSIE +F  D DEK+I DSSGR+ +  
Sbjct: 1   MEFGVDGTINGEVLRNSADLDVSRVGDENETAGSSIEGVFQHDHDEKMILDSSGRDILPT 60

Query: 74  SVPGLPIVQADEPYVGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAIGRALV 133
            VP + +V ADEPYVGQEFE+EAAAHAFYNAYATRVGF+IRVSKLSRSRRDG+AIGRALV
Sbjct: 61  GVPAMSMVSADEPYVGQEFESEAAAHAFYNAYATRVGFIIRVSKLSRSRRDGSAIGRALV 120

Query: 134 CNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGKGRR 193
           CNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKV SGKWVVTKFVKEH HPL+PGKGRR
Sbjct: 121 CNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVTSGKWVVTKFVKEHAHPLTPGKGRR 180

Query: 194 DCIYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIDEHNDNLSRKIQHIVDNV 253
           DCIYDQYPNEHDKIRELSQQLA+EKKR+ATYKRHLE+IFE+I+EHN+ LS+KIQHIVD+V
Sbjct: 181 DCIYDQYPNEHDKIRELSQQLAVEKKRAATYKRHLELIFEHIEEHNETLSKKIQHIVDSV 240

Query: 254 KEMESIEQQSHR 263
           KEME+ EQQ HR
Sbjct: 241 KEMETKEQQGHR 252

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g12510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FRS5_ARATH6.5e-2557.41Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1[more]
FRS12_ARATH2.7e-1844.86Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1[more]
FRS7_ARATH7.7e-1844.12Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1[more]
FRS6_ARATH7.5e-1332.04Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6 PE=2 SV=1[more]
FRS1_ARATH2.8e-1229.80Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=FRS1 PE=1 SV=1[more]
BLAST of Cp4.1LG03g12510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ37_CUCSA1.4e-13095.22Uncharacterized protein OS=Cucumis sativus GN=Csa_4G017090 PE=4 SV=1[more]
W9RTC0_9ROSA1.8e-10677.10Uncharacterized protein OS=Morus notabilis GN=L484_024756 PE=4 SV=1[more]
A0A0S3SFZ5_PHAAN3.2e-10375.88Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G039800 PE=... [more]
V7BZA2_PHAVU3.9e-10173.64Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G153200g PE=4 SV=1[more]
V7BWP3_PHAVU6.6e-10173.83Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G153200g PE=4 SV=1[more]
BLAST of Cp4.1LG03g12510 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G59470.18.1e-8265.11 Far-red impaired responsive (FAR1) family protein[more]
AT3G07500.17.1e-3841.55 Far-red impaired responsive (FAR1) family protein[more]
AT2G43280.11.7e-3142.08 Far-red impaired responsive (FAR1) family protein[more]
AT4G12850.16.1e-2937.29 Far-red impaired responsive (FAR1) family protein[more]
AT4G38180.13.7e-2657.41 FAR1-related sequence 5[more]
BLAST of Cp4.1LG03g12510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700197963|gb|KGN53121.1|2.0e-13095.22hypothetical protein Csa_4G017090 [Cucumis sativus][more]
gi|449468756|ref|XP_004152087.1|5.7e-13095.20PREDICTED: protein FAR1-RELATED SEQUENCE 6 [Cucumis sativus][more]
gi|659107943|ref|XP_008453933.1|7.5e-13094.80PREDICTED: protein FAR1-RELATED SEQUENCE 6 [Cucumis melo][more]
gi|703102737|ref|XP_010097543.1|2.6e-10677.10hypothetical protein L484_024756 [Morus notabilis][more]
gi|1009139189|ref|XP_015886991.1|5.8e-10679.37PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR004330FAR1_DNA_bnd_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g12510.1Cp4.1LG03g12510.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004330FAR1 DNA binding domainPFAMPF03101FAR1coord: 98..185
score: 3.5
NoneNo IPR availableunknownCoilCoilcoord: 236..256
scor
NoneNo IPR availablePANTHERPTHR31669:SF29SUBFAMILY NOT NAMEDcoord: 20..258
score: 1.0E