Cp4.1LG03g11960 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g11960
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPectinesterase
LocationCp4.1LG03 : 10777213 .. 10782033 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCTCCAAAATTGGAGAATCCTTTCCAACCAACAATTTCCCACTTTATTTCTCAAACCTTCCGTATTAAATCTCATTCCTCAATCTTCCAAATTCCAATTCATTTCGTTTCATTCCTCAAGAATCGTTCTCTTCATCTCCAAAATCATGGCTGATTCATCCTCGAATTCCCTATGCAATCTGATTCACATTGCATTCGCAATCGCTTTTGCTCTGTTAATCTCATCTCCGATCGGTTCTTACGGCTTTACTGCGCAAAATGTGATCAATTCGCCATTGTTGACGAAGAAGATCGCCACAAATCGCACGATCAAGGTTGATATCAACGGAAATGGCGAGTTCACGTCCATTCAAGCTGCAGTCGATGCTGTTCCGGAGGGGAATTCGCAGTGGATGATCATCCATGTTAGGAAAGGAATTTACAGGTGATTTCTAGCGTTTTCTCTTCCGGATTCTTACATTGATGTGATAAATTGTTCGTTTGTGTTTTTAATTGACGAAAGAGTGCGTGTTCTTGGCTCTGTAGAGAGAAGGTTCATATTCCGTCGAGTAAGCCGTACATCTTCTTGAGAGGAAACGGAAAAGGAAGGACGCACATGGTTTGGTCACAGAGCTCTAATGATAACATTGAATCTGCTACTTTTAAAGTCGAAGCCAAACATTTCATTGCTTTTGGAATTAGCTTCAAGGTCCAACATATTTCTCGATTCCTTTGGTGATTTTTGCCTAAATTAGCTTCAAAATGTATTCAGTTATTCCATTGATTTCTCTCTTTTTTCGTTTATTTCTTCTGGAAATTTTCCTATACAGAATGAGGCTCCGACTGGAGTGGCTTACACATCGCAAAATCAGTCGGTAGCGGCATTCATTGCCGCAGATAAAGTCGCATTTTACCATTGTGGATTCTACAGCACTCACAATACGCTGTTCGATTACAAAGGCAGACATTATTATGACGGTTGCTACATTCAAGGCTCAATTGATTTTATCTTTGGCCGCGGCAAATCCGTCTTCCACGTAATTCTTTTCCCTTCCTTTCTCTACTGTTGCTTGCTCTCTGAAGAATTTAGAATACCTTTGGTGTTTTATACATGGAATATTTACAGTTCTCTTAATAACCGTTTCATATTTCATTTTTGGATTCTGGTTTTTAGTTTCTTAAAACTAAATTTATAAACGTTATTCTACCTCTTTCCATGTTTGTTCTTCACTTTCTAGTAATGTTTTCAAAACTACTTACAAATAGTTTTCAAACATAAACGAGGATGGTTGGGAGGAGTCCTACATTGGTTAGTTTAGGTAATGATCATAGGTTTTAAGCAAGGAATACATCTCCATTGATATGAGGTCTTTTGGGAAGCCTAAAGCAAAGTCATGAGAACTTATGCTCAAAGTGGATAATATCATACCATTGTGGGGATCAGTGTTTCCTAACATGGTATATGAATCATGCCTTTAACTTAGCCATGTTAATAGAATCCTCAAATGTCGAACAAAGAAGTTGTGAGCCTTGAAGTCAAAAGTGACTCAAGTGTCGAATAAATAGTGTACTTTGTTTGAGGACTCCATACTTTGTTTGAGGACTCCATACTTTGTTTGAGGACTCCATACTTTGTTTGAGGACTCCATACTTTGTTTGAGGACTCTAGAAAAGGAGTCGAGCCTCGATTAAGGGGAGACAGTTCGATGGCTCCATCAGGGGAGGCTCTATAGTATAGTTTATTCGAGGGGAGGATTGTAGGGGATCATAGGTTTATAAGTGAGGAATACATCTCCATTGGTATACATACGAGTTTATGCTCAAAGTGAACAATATCATGCAACTGTAAAGATAGGTAATGATAGGTAATTCGTAACAGCATGCATATTTGATTTGAAAAAAATGATGTAGTGTGTTAAAAACAGGTCAACTTAAGAATTTAGAAGCTCATGTAACCAAGTAATTTCATTATAGTCTAATCTTTCTTTCATTTTTCTTGGTGGGATGTGATGATTTTCCATGAAAAACGATGTTATATTGTTGCTGTGGATGCAGAATTGTGAGATGTTTGTGATTGATGACAAGAGATTGACGGTCCGTGGTTCAGTCACAGCTCAAAACAGAAAAAGTGCAGATGAGAACAGCGGGTTTGTTTTCATCAGAGGAAAGGTTTACGGAATTGGCGGTGTGTATTTGGGGAGAGCAAAAGGTGCATTTTCCAGAGTCGTCTTTGCCAAGACTTACTTCTCCATGACTGTTCTTCCTGCTGGTTGGACCAATTGGAGCTATTCTGGTGGCACAGAGTAAGCACTCCCTCTCTCCCCCATTTACGCGTTTATAATTGCTAGGAATCATGCTAGGAATCACGTACCATGCTGCGATATTGTCTACTTTGAGCATAAGTTCTCATACCAATAGAGATATATTCCTTACTTATAAACCTACTATCATCCTCTAAATTGGCCAATGGGAGACTCCCTCTCAACAATTCTCAACATGAACTAGTCTTTAACTAGTTGAATTATGTTTGATTTAGTCGTTTACTGAATTATTAGGAATCACGAACCTCCATAATTGTAGGATACTTTCTACTTTGAACATAAGCTCTCATGACTTTATTTCTTTGTTTTCCCACACCCCTCGTGCCAATTGAGATATATTCCTTATTTATAAATCCACTATCATCCTCTAAATTTGCCAATGTGAGACTCCCTCTCAACAATTCTCAACATGAACTAGTCTTTAACTAGTTGAATTATACTTGATTTAGCTGTTTACTGAACTATTAGGAATTACGAACCTCTATAATAGTATGATACTTTCCAATTTGAACATAAGCTCTCTGACTTTGTTTTTTGTTTTTCCAAACAACCTCATGCCAATTGAGATATATTCCTTATTTTTAAATTCATGATCATCCTCTAAATTAGTTAGCGTAAAATTTCCTCCCAACAATCTTCAACTTGAACTAGTTTTTAATGGTTGATAATTACTTGAACTAAACTAGTATTTTTGTAAGTTCAACCAGTGTTTTTGTGATTACAGGAATCTGTATCATTCAGAATATGATTGCCATGGACCAGGAGCAGAAAAAGGGAACCGAGCACCATGGGCCAAACAGCTAACTGACAAGGAAGCTGACCAGTATATGGACATCAGCTTTATTGAAGGGGCTGATTGGCTTCCTGCGTGGCTATAAGCAAAAAACAGAAAAAAAAAAAAAAAAAAAAAGGCTAAGCTAATTCACTCCTCTCGCAAGTCCTTCTCCCCTTTATTTTTATAAATTTACGGTCTATTCGGGTTCTTTTTGCAAGCTATTTCGCAAAGATTTCGCAAAGATTCTTAAAACTATTTGTTCCAATGAGACGAAATATTGAATTCAAATTCTTCTCTTTTTTTTTTTTATTTTTTTTTTTAAATCTTTTTCTGGTTATCTTATTACGTAGAATTGGAAGTAGAAATAGGTAGTGGTCTTTGCATGAGCATTTTCTGGTGGCTGCATGCATATTAGCTTTTGTAAATATATTGGGAAAATTTCCAGGACTTTGGGAGTATCTATATCTACTCCCTTTTTTAACATCATATTTGATTTGGTCTGATTTTAGACTCTGCCACCGAATCCTCCCCCTGAACCGCCACCAAAGCCTCCTCCTCCACCTGCTCCGCCTCCAAATCCACCTCCTTTACCACCTCCAAAACCTCCTCCTGCTCCGCCCCCATGGCCTCCTCCGAAACCACCTCCTGCTCCCCCGCCAGCTCCGCCTCCAAAGCCCCCTCCTGCTCCTCCACCAGCTCCGCCTCCAAATCCACCTCCCGCTCCGCCTCCAAATCCACCTCCCGCTCCGCCTCCATGGCCACCTCCGAAACCGCCTCCTGCTCCACCACCAGCTCCACCTCCTGCTCCGCCTCCAAACCCACCTCCTGCTCCGCCTCCTGCTCCGCCTCCCGCTCCGCCTCCGAAACCACCTCCTTTACCACCTCCGAAACCACCTCCCGCTCCCCCACCAGCTCCGCCTCCAAAACCACCGCCTGCTCCGCCACCAGCTCCACCTCCAGCTCCACCTCCAAATCCACCTCCTTTACCACCTCCAAATCCACCTCCAGCTCCGCCTCCTAATCCACCTCCCCCTCCAATTCCGCCGCCATGGCCACCTCCGAATCCACCTCCAGCTCCGCCTCCTAATCCACCGCCGCCTCCTAATCCACCTCCACCTCCTAATCCACCGCCATGCCCACCTCCAAAACCACCACCAAGGCCACCTCCAGCTCCGGCTCCAGCTCCACCTCCAAACCCACCACCAGCACCACCGCCAAGACCACCACCAAGCGTCTCCTTCTCCAACTTCCGGCTTTCAGCAAATCCCACAATCAAAAATGCCAGAACAAGAGCCAAGCCTCCAACCTTGTAAGTAATTTTGGCCATACTCCTTAAGCTAGAAAGAGTAGAGCTCACTTTTTGAATGCACAATAATGCATTGTAGAGATTATTGTTATTATTTATAGCGAGAGAAGTGCAGGCAGGGGAACAGCATTAATGCATGCAGTTGAGACTCCTCTTGTTTGACTGTTTTAGTTGGTTGGGACACTCTTTAGAACTTAATGAAATGCCTAAGTTTTCAACTAAGGGGCCGTTGAGTTCCTTAATTTGCTTGGCTCCACCTCTCATCTGCTAACCGATTTTACAGCACAGATCCATCCATTTTCCTGTATTTGCACAAAAAGTCCTCCTCCAATGCCCCACTTGGTCCCATCTGAGCCACGGACTCTCAGTTTTCTTTGAATTATTCATAGACCCAATTATGCATGGGTTAGATTTGTGGGAAGTCATCATTCCAATACACA

mRNA sequence

CCCTCCAAAATTGGAGAATCCTTTCCAACCAACAATTTCCCACTTTATTTCTCAAACCTTCCGTATTAAATCTCATTCCTCAATCTTCCAAATTCCAATTCATTTCGTTTCATTCCTCAAGAATCGTTCTCTTCATCTCCAAAATCATGGCTGATTCATCCTCGAATTCCCTATGCAATCTGATTCACATTGCATTCGCAATCGCTTTTGCTCTGTTAATCTCATCTCCGATCGGTTCTTACGGCTTTACTGCGCAAAATGTGATCAATTCGCCATTGTTGACGAAGAAGATCGCCACAAATCGCACGATCAAGGTTGATATCAACGGAAATGGCGAGTTCACGTCCATTCAAGCTGCAGTCGATGCTGTTCCGGAGGGGAATTCGCAGTGGATGATCATCCATGTTAGGAAAGGAATTTACAGAGAGAAGGTTCATATTCCGTCGAGTAAGCCGTACATCTTCTTGAGAGGAAACGGAAAAGGAAGGACGCACATGGTTTGGTCACAGAGCTCTAATGATAACATTGAATCTGCTACTTTTAAAGTCGAAGCCAAACATTTCATTGCTTTTGGAATTAGCTTCAAGAATGAGGCTCCGACTGGAGTGGCTTACACATCGCAAAATCAGTCGGTAGCGGCATTCATTGCCGCAGATAAAGTCGCATTTTACCATTGTGGATTCTACAGCACTCACAATACGCTGTTCGATTACAAAGGCAGACATTATTATGACGGTTGCTACATTCAAGGCTCAATTGATTTTATCTTTGGCCGCGGCAAATCCGTCTTCCACAATTGTGAGATGTTTGTGATTGATGACAAGAGATTGACGGTCCGTGGTTCAGTCACAGCTCAAAACAGAAAAAGTGCAGATGAGAACAGCGGGAATCTGTATCATTCAGAATATGATTGCCATGGACCAGGAGCAGAAAAAGGGAACCGAGCACCATGGGCCAAACAGCTAACTGACAAGGAAGCTGACCAGTATATGGACATCAGCTTTATTGAAGGGGCTGATTGGCTTCCTGCGTGGCTATAAGCAAAAAACAGAAAAAAAAAAAAAAAAAAAAAGGCTAAGCTAATTCACTCCTCTCGCAAGTCCTTCTCCCCTTTATTTTTATAAATTTACGGTCTATTCGGGTTCTTTTTGCAAGCTATTTCGCAAAGATTTCGCAAAGATTCTTAAAACTATTTGTTCCAATGAGACGAAATATTGAATTCAAATTCTTCTCTTTTTTTTTTTTATTTTTTTTTTTAAATCTTTTTCTGGTTATCTTATTACGTAGAATTGGAAGTAGAAATAGGTAGTGGTCTTTGCATGAGCATTTTCTGGTGGCTGCATGCATATTAGCTTTTGTAAATATATTGGGAAAATTTCCAGGACTTTGGGAGTATCTATATCTACTCCCTTTTTTAACATCATATTTGATTTGGTCTGATTTTAGACTCTGCCACCGAATCCTCCCCCTGAACCGCCACCAAAGCCTCCTCCTCCACCTGCTCCGCCTCCAAATCCACCTCCTTTACCACCTCCAAAACCTCCTCCTGCTCCGCCCCCATGGCCTCCTCCGAAACCACCTCCTGCTCCCCCGCCAGCTCCGCCTCCAAAGCCCCCTCCTGCTCCTCCACCAGCTCCGCCTCCAAATCCACCTCCCGCTCCGCCTCCAAATCCACCTCCCGCTCCGCCTCCATGGCCACCTCCGAAACCGCCTCCTGCTCCACCACCAGCTCCACCTCCTGCTCCGCCTCCAAACCCACCTCCTGCTCCGCCTCCTGCTCCGCCTCCCGCTCCGCCTCCGAAACCACCTCCTTTACCACCTCCGAAACCACCTCCCGCTCCCCCACCAGCTCCGCCTCCAAAACCACCGCCTGCTCCGCCACCAGCTCCACCTCCAGCTCCACCTCCAAATCCACCTCCTTTACCACCTCCAAATCCACCTCCAGCTCCGCCTCCTAATCCACCTCCCCCTCCAATTCCGCCGCCATGGCCACCTCCGAATCCACCTCCAGCTCCGCCTCCTAATCCACCGCCGCCTCCTAATCCACCTCCACCTCCTAATCCACCGCCATGCCCACCTCCAAAACCACCACCAAGGCCACCTCCAGCTCCGGCTCCAGCTCCACCTCCAAACCCACCACCAGCACCACCGCCAAGACCACCACCAAGCGTCTCCTTCTCCAACTTCCGGCTTTCAGCAAATCCCACAATCAAAAATGCCAGAACAAGAGCCAAGCCTCCAACCTTGTAAGTAATTTTGGCCATACTCCTTAAGCTAGAAAGAGTAGAGCTCACTTTTTGAATGCACAATAATGCATTGTAGAGATTATTGTTATTATTTATAGCGAGAGAAGTGCAGGCAGGGGAACAGCATTAATGCATGCAGTTGAGACTCCTCTTGTTTGACTGTTTTAGTTGGTTGGGACACTCTTTAGAACTTAATGAAATGCCTAAGTTTTCAACTAAGGGGCCGTTGAGTTCCTTAATTTGCTTGGCTCCACCTCTCATCTGCTAACCGATTTTACAGCACAGATCCATCCATTTTCCTGTATTTGCACAAAAAGTCCTCCTCCAATGCCCCACTTGGTCCCATCTGAGCCACGGACTCTCAGTTTTCTTTGAATTATTCATAGACCCAATTATGCATGGGTTAGATTTGTGGGAAGTCATCATTCCAATACACA

Coding sequence (CDS)

ATGGCTGATTCATCCTCGAATTCCCTATGCAATCTGATTCACATTGCATTCGCAATCGCTTTTGCTCTGTTAATCTCATCTCCGATCGGTTCTTACGGCTTTACTGCGCAAAATGTGATCAATTCGCCATTGTTGACGAAGAAGATCGCCACAAATCGCACGATCAAGGTTGATATCAACGGAAATGGCGAGTTCACGTCCATTCAAGCTGCAGTCGATGCTGTTCCGGAGGGGAATTCGCAGTGGATGATCATCCATGTTAGGAAAGGAATTTACAGAGAGAAGGTTCATATTCCGTCGAGTAAGCCGTACATCTTCTTGAGAGGAAACGGAAAAGGAAGGACGCACATGGTTTGGTCACAGAGCTCTAATGATAACATTGAATCTGCTACTTTTAAAGTCGAAGCCAAACATTTCATTGCTTTTGGAATTAGCTTCAAGAATGAGGCTCCGACTGGAGTGGCTTACACATCGCAAAATCAGTCGGTAGCGGCATTCATTGCCGCAGATAAAGTCGCATTTTACCATTGTGGATTCTACAGCACTCACAATACGCTGTTCGATTACAAAGGCAGACATTATTATGACGGTTGCTACATTCAAGGCTCAATTGATTTTATCTTTGGCCGCGGCAAATCCGTCTTCCACAATTGTGAGATGTTTGTGATTGATGACAAGAGATTGACGGTCCGTGGTTCAGTCACAGCTCAAAACAGAAAAAGTGCAGATGAGAACAGCGGGAATCTGTATCATTCAGAATATGATTGCCATGGACCAGGAGCAGAAAAAGGGAACCGAGCACCATGGGCCAAACAGCTAACTGACAAGGAAGCTGACCAGTATATGGACATCAGCTTTATTGAAGGGGCTGATTGGCTTCCTGCGTGGCTATAA

Protein sequence

MADSSSNSLCNLIHIAFAIAFALLISSPIGSYGFTAQNVINSPLLTKKIATNRTIKVDINGNGEFTSIQAAVDAVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTHMVWSQSSNDNIESATFKVEAKHFIAFGISFKNEAPTGVAYTSQNQSVAAFIAADKVAFYHCGFYSTHNTLFDYKGRHYYDGCYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLTVRGSVTAQNRKSADENSGNLYHSEYDCHGPGAEKGNRAPWAKQLTDKEADQYMDISFIEGADWLPAWL
Homology
[Close]
BLAST of Cp4.1LG03g11960 vs. Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 6.4e-85
Identity = 150/233 (64.38%), Postives = 189/233 (81.12%), Query Frame = 1 

Query: 19  IAFALLISSPIGSYGFTAQNV-INSPLLTKKIATNRTIKVDINGNGEFTSIQAAVDAVPE 78
           +   L++ S  GS     Q    ++PLLT+KIATNR+I VDI G G++TS+Q A+DAVP 
Sbjct: 9   LVLTLVVMSIWGSDASAMQKTKFDAPLLTEKIATNRSIIVDIEGKGDYTSVQKAIDAVPV 68

Query: 79  GNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTHMVWSQSSNDNIESATFKVEAK 138
           GNS W+I+HVRKGIY+E+VHIP +KP+IF+RGNGKG+T +  SQSS DN+ SATFKVEA 
Sbjct: 69  GNSNWIIVHVRKGIYKERVHIPENKPFIFMRGNGKGKTVIESSQSSVDNVASATFKVEAN 128

Query: 139 HFIAFGISFKNEAPTGVAYTSQNQSVAAFIAADKVAFYHCGFYSTHNTLFDYKGRHYYDG 198
           HF+AFGIS +N+AP G+A+TS+NQSVAAF+AADKVAFYHC FYS HNTLFD KGRHYY  
Sbjct: 129 HFVAFGISIRNDAPVGMAFTSENQSVAAFVAADKVAFYHCAFYSLHNTLFDNKGRHYYHE 188

Query: 199 CYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLTVRGSVTAQNRKSADENSGNLY 251
           CYIQGSIDFIFGR  S+F+NCE+FVI DKR+   GS+TA +R+SA+E +G ++
Sbjct: 189 CYIQGSIDFIFGRATSIFNNCEIFVISDKRVKPYGSITAHHRESAEEKTGYVF 241

[Close]
BLAST of Cp4.1LG03g11960 vs. Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.5e-38
Identity = 86/207 (41.55%), Postives = 128/207 (61.84%), Query Frame = 1 

Query: 45  LTKKIATNRTIKVDINGNGEFTSIQAAVDAVPEGNSQWMIIHVRKGIYREKVHIPSSKPY 104
           L  +  T+  + VD++G G F+++Q+A+D VP+ +S   +I V  G YREKV +  +K  
Sbjct: 81  LRHQYKTSLVLTVDLHGCGNFSNVQSAIDVVPDLSSSKTLIIVNSGSYREKVTVNENKTN 140

Query: 105 IFLRGNGKGRTHMVWS---QSSNDNIESATFKVEAKHFIAFGISFKNEAPTGVAYTSQNQ 164
           + ++G G   T + W+   +S+ +  +S +F V A +F A+ ISFKN AP      +  Q
Sbjct: 141 LVIQGRGYQNTSIEWNDTAKSAGNTADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQ 200

Query: 165 SVAAFIAADKVAFYHCGFYSTHNTLFDYKGRHYYDGCYIQGSIDFIFGRGKSVFHNCEMF 224
           +VA  I  D+ AFY CGFY   +TL D KGRH++  C+IQGSIDFIFG G+S++ +C + 
Sbjct: 201 AVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTIN 260

Query: 225 VIDDKRLT-VRGSVTAQNRKSADENSG 248
            I     + V GS+TAQ R+S DE SG
Sbjct: 261 SIAKGNTSGVTGSITAQGRQSEDEQSG 287

[Close]
BLAST of Cp4.1LG03g11960 vs. Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.6e-35
Identity = 80/205 (39.02%), Postives = 120/205 (58.54%), Query Frame = 1 

Query: 52  NRTIKVDINGNGEFTSIQAAVDAVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNG 111
           ++ I V +NG+ +F S+Q AVD++P+ N++ + I +  G YREKV +P++KPYI  +G G
Sbjct: 58  HKVITVSLNGHAQFRSVQDAVDSIPKNNNKSITIKIAPGFYREKVVVPATKPYITFKGAG 117

Query: 112 KGRTHMVWSQSSND---------NIESATFKVEAKHFIAFGISFKNEAPTGVAYTSQNQS 171
           +  T + W   ++D           ++A+  V A +F A  ISF N AP  +      Q+
Sbjct: 118 RDVTAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQA 177

Query: 172 VAAFIAADKVAFYHCGFYSTHNTLFDYKGRHYYDGCYIQGSIDFIFGRGKSVFHNCEMFV 231
           VA  I+ DK  F  CGFY   +TL D  GRHY+  CYI+GSIDFIFG G+S++ +CE+  
Sbjct: 178 VAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHS 237

Query: 232 IDDKRLTVRGSVTAQNRKSADENSG 248
           I  +     GS+ A  R   +E +G
Sbjct: 238 IASR----FGSIAAHGRTCPEEKTG 258

[Close]
BLAST of Cp4.1LG03g11960 vs. Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 3.5e-35
Identity = 87/204 (42.65%), Postives = 117/204 (57.35%), Query Frame = 1 

Query: 51  TNRTIKVDINGNGEFTSIQAAVDAVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGN 110
           T   + VD NG   FT++Q+AVDAV   + +  +I +  G+Y EKV IP +KP I L+G 
Sbjct: 87  TTSYLCVDKNGCCNFTTVQSAVDAVGNFSQRRNVIWINSGMYYEKVVIPKTKPNITLQGQ 146

Query: 111 GKGRTHMVWSQ---SSNDNIESATFKVEAKHFIAFGISFKNEAPTGVAYTSQNQSVAAFI 170
           G   T + W+    S+N     AT +V    F+A  ISF N AP         Q+VA  I
Sbjct: 147 GFDITAIAWNDTAYSANGTFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRI 206

Query: 171 AADKVAFYHCGFYSTHNTLFDYKGRHYYDGCYIQGSIDFIFGRGKSVFHNCEMFVIDDK- 230
           A D+ AF  CGF+   +TL D +GRHY+  CYIQGSIDFIFG  KS++ +C +  + ++ 
Sbjct: 207 AGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQL 266

Query: 231 ---RLTVRGSVTAQNRKSADENSG 248
                 V G+VTA  R S DENSG
Sbjct: 267 SPGSKAVNGAVTANGRSSKDENSG 290

[Close]
BLAST of Cp4.1LG03g11960 vs. Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 9.6e-33
Identity = 77/199 (38.69%), Postives = 119/199 (59.80%), Query Frame = 1 

Query: 57  VDINGNGEFTSIQAAVDAVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTH 116
           VD +G+G FT+IQ A+D+VP  N+ W  I+V+ G+YREK+ IP  KP+I + G GK  T 
Sbjct: 31  VDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRSTR 90

Query: 117 MVWSQSSNDNIESATFKVEAKHFIAFGISFKNE----APTGVAYTSQNQSVAAFIAADKV 176
           + W   ++   +S TF   A + +   I+F N     +   +    +  +VAAFI  DK 
Sbjct: 91  VEWDDHAS-LAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDKS 150

Query: 177 AFYHCGFYSTHNTLFDYKGRHYYDGCYIQGSIDFIFGRGKSVFHNCEMFVIDDK-RLTVR 236
           AFY  GF    +TL+D  GRHY+  C IQG++DFI G G+S++ +C + V+  +    V 
Sbjct: 151 AFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVT 210

Query: 237 GSVTAQNRKSADENSGNLY 251
           G +TAQ R +A++ +G ++
Sbjct: 211 GYITAQGRTNANDANGFVF 228

[Close]
BLAST of Cp4.1LG03g11960 vs. TrEMBL
Match: A0A0A0LAR0_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_3G166360 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 8.3e-124
Identity = 223/251 (88.84%), Postives = 238/251 (94.82%), Query Frame = 1 

Query: 1   MADSSSNSL-CNLIHIAFAIAFALLISSPIGSYGFTAQNVINSPLLTKKIATNRTIKVDI 60
           MADSSSNSL    I+IAFAIAF  LISSPIGSY FTAQNVI+SPLLTKKI TNRTIKVDI
Sbjct: 1   MADSSSNSLFIKPIYIAFAIAFTFLISSPIGSYAFTAQNVIDSPLLTKKIGTNRTIKVDI 60

Query: 61  NGNGEFTSIQAAVDAVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTHMVW 120
           NGNGEF SIQAAVD+VPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRT +VW
Sbjct: 61  NGNGEFKSIQAAVDSVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTSIVW 120

Query: 121 SQSSNDNIESATFKVEAKHFIAFGISFKNEAPTGVAYTSQNQSVAAFIAADKVAFYHCGF 180
           SQSS+DN+ESATFKVEA +FIAFG+SFKNEAPTGVAYTSQNQSVAAF+AADK+AFYHCGF
Sbjct: 121 SQSSSDNVESATFKVEAHNFIAFGVSFKNEAPTGVAYTSQNQSVAAFVAADKIAFYHCGF 180

Query: 181 YSTHNTLFDYKGRHYYDGCYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLTVRGSVTAQNR 240
           YSTHNTLFDYKGRHYYD CYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLT+RGS+TAQNR
Sbjct: 181 YSTHNTLFDYKGRHYYDKCYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLTIRGSITAQNR 240

Query: 241 KSADENSGNLY 251
           KSA+ENSG ++
Sbjct: 241 KSANENSGFVF 251

[Close]
BLAST of Cp4.1LG03g11960 vs. TrEMBL
Match: A0A061EPH4_THECC (Pectinesterase OS=Theobroma cacao GN=TCM_021377 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.3e-105
Identity = 197/338 (58.28%), Postives = 235/338 (69.53%), Query Frame = 1 

Query: 13  IHIAFAIAFALLISSPIGSYGFTAQNVINSPLLTKKIATNRTIKVDINGNGEFTSIQAAV 72
           +H+AFA   A+ I  P  + G +A+ VI+SPLLT+KI+TNRTIKVD+NGNG+FTS+Q A+
Sbjct: 74  MHLAFAAIVAVAICFPGCANGMSAERVIDSPLLTEKISTNRTIKVDLNGNGDFTSVQEAI 133

Query: 73  DAVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTHMVWSQSSNDNIESATF 132
           ++VP+GNSQW+IIH+RKG+YREKVH+P  KPYIFLRGNG+GRT + WSQSS DN  SATF
Sbjct: 134 NSVPKGNSQWVIIHLRKGVYREKVHVPKDKPYIFLRGNGRGRTAIAWSQSSVDNKASATF 193

Query: 133 KVEAKHFIAFGISFKNEAPTGVAYTSQNQSVAAFIAADKVAFYHCGFYSTHNTLFDYKGR 192
            VEAKHFIAFGISFKNEAPTG+AYTSQNQSVAAF+ AD VAFYHC F+STHNTLFDYKGR
Sbjct: 194 TVEAKHFIAFGISFKNEAPTGIAYTSQNQSVAAFVGADMVAFYHCAFFSTHNTLFDYKGR 253

Query: 193 HYYDGCYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLTVRGSVTAQNRKSADENSGNLYHS 252
           HYYD CYIQGSIDFIFGRG+S+FHNCE+FV+ DKR+ +RGS+TAQNR S  +NSG ++  
Sbjct: 254 HYYDNCYIQGSIDFIFGRGRSLFHNCEIFVLQDKRIKIRGSITAQNRGSPQDNSGFVF-V 313

Query: 253 EYDCHGPGAEKGNRAP-------------------------------------------- 298
           E   +G G     RA                                             
Sbjct: 314 EGKVYGIGGVYLGRAKGAYSTVVFAKTYLSRTIVPHGWTDWSYHGGSDHLFHAEYDCRGP 373

[Close]
BLAST of Cp4.1LG03g11960 vs. TrEMBL
Match: A0A061EQW4_THECC (Pectinesterase OS=Theobroma cacao GN=TCM_021377 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.3e-105
Identity = 197/338 (58.28%), Postives = 235/338 (69.53%), Query Frame = 1 

Query: 13  IHIAFAIAFALLISSPIGSYGFTAQNVINSPLLTKKIATNRTIKVDINGNGEFTSIQAAV 72
           +H+AFA   A+ I  P  + G +A+ VI+SPLLT+KI+TNRTIKVD+NGNG+FTS+Q A+
Sbjct: 1   MHLAFAAIVAVAICFPGCANGMSAERVIDSPLLTEKISTNRTIKVDLNGNGDFTSVQEAI 60

Query: 73  DAVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTHMVWSQSSNDNIESATF 132
           ++VP+GNSQW+IIH+RKG+YREKVH+P  KPYIFLRGNG+GRT + WSQSS DN  SATF
Sbjct: 61  NSVPKGNSQWVIIHLRKGVYREKVHVPKDKPYIFLRGNGRGRTAIAWSQSSVDNKASATF 120

Query: 133 KVEAKHFIAFGISFKNEAPTGVAYTSQNQSVAAFIAADKVAFYHCGFYSTHNTLFDYKGR 192
            VEAKHFIAFGISFKNEAPTG+AYTSQNQSVAAF+ AD VAFYHC F+STHNTLFDYKGR
Sbjct: 121 TVEAKHFIAFGISFKNEAPTGIAYTSQNQSVAAFVGADMVAFYHCAFFSTHNTLFDYKGR 180

Query: 193 HYYDGCYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLTVRGSVTAQNRKSADENSGNLYHS 252
           HYYD CYIQGSIDFIFGRG+S+FHNCE+FV+ DKR+ +RGS+TAQNR S  +NSG ++  
Sbjct: 181 HYYDNCYIQGSIDFIFGRGRSLFHNCEIFVLQDKRIKIRGSITAQNRGSPQDNSGFVF-V 240

Query: 253 EYDCHGPGAEKGNRAP-------------------------------------------- 298
           E   +G G     RA                                             
Sbjct: 241 EGKVYGIGGVYLGRAKGAYSTVVFAKTYLSRTIVPHGWTDWSYHGGSDHLFHAEYDCRGP 300

[Close]
BLAST of Cp4.1LG03g11960 vs. TrEMBL
Match: A0A151RCS3_CAJCA (Pectinesterase OS=Cajanus cajan GN=KK1_038189 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 2.8e-103
Identity = 197/351 (56.13%), Postives = 241/351 (68.66%), Query Frame = 1 

Query: 1   MADSSSNSLCNL--IHIAFAIAFALLISSPIGSYGFTAQNVINSPLLTKKIATNRTIKVD 60
           MA SSS SL N   I I   + F +L  +     G+  Q V +SPLLT+K+  NRTIKVD
Sbjct: 1   MASSSSLSLHNASSIFIVAILNFCMLYCA----LGYDGQTVADSPLLTEKLGINRTIKVD 60

Query: 61  INGNGEFTSIQAAVDAVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTHMV 120
           INGNGEF S+QAA+D++PE NS W+I+HVRKG+YREKVHIP +KPYIF+RGNG+G+T +V
Sbjct: 61  INGNGEFNSVQAAIDSIPEDNSNWVIVHVRKGLYREKVHIPENKPYIFMRGNGRGKTAIV 120

Query: 121 WSQSSNDNIESATFKVEAKHFIAFGISFKNEAPTGVAYTSQNQSVAAFIAADKVAFYHCG 180
           WSQSS+DN+ SATFKVEA  FIAFGISFKNEAPTGVAYTSQNQSVAAF+AADK+AFYHC 
Sbjct: 121 WSQSSSDNVASATFKVEAHDFIAFGISFKNEAPTGVAYTSQNQSVAAFVAADKIAFYHCA 180

Query: 181 FYSTHNTLFDYKGRHYYDGCYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLTVRGSVTAQN 240
           FYSTHNTLFDYKGRHYYD CYIQGSIDFIFGRG+++FH+CEMFV+ DKR+T+ GS+TAQN
Sbjct: 181 FYSTHNTLFDYKGRHYYDNCYIQGSIDFIFGRGRTIFHDCEMFVVGDKRVTIHGSITAQN 240

Query: 241 RKSADENSGNLYH--SEYDCHGP--GAEKGNR---------------------------- 298
           R+S  E SG ++H    Y   G   G  KG                              
Sbjct: 241 RESEGEMSGFIFHKCKVYGIGGVYLGRAKGPYSRVIFAKSYLSVTIVPEGWTNWSYDGST 300

[Close]
BLAST of Cp4.1LG03g11960 vs. TrEMBL
Match: M5XR90_PRUPE (Pectinesterase OS=Prunus persica GN=PRUPE_ppa017141mg PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 5.8e-101
Identity = 182/251 (72.51%), Postives = 216/251 (86.06%), Query Frame = 1 

Query: 1   MADSSSNSLCNLIHIAFAIAFALLISSPIGSYGFTAQNVINSPLLTKKIATNRTIKVDIN 60
           MA S+S +      I  AI F++ ++      G TA+ VI+SPLLT+KI +NRTIKVDIN
Sbjct: 1   MAGSTSTTF-----ITLAIIFSIAVTFTNVVDGLTAETVIDSPLLTQKINSNRTIKVDIN 60

Query: 61  GNGEFTSIQAAVDAVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTHMVWS 120
           G G+F S+QAA+D+VPEGNS+W+IIHVRKG+YREKV +P SKPYIF+RGNGKGR+ +VWS
Sbjct: 61  GKGDFKSVQAAIDSVPEGNSKWIIIHVRKGVYREKVIVPRSKPYIFMRGNGKGRSAIVWS 120

Query: 121 QSSNDNIESATFKVEAKHFIAFGISFKNEAPTGVAYTSQNQSVAAFIAADKVAFYHCGFY 180
           QSS+DN+ESATF VEA HFIAFGISFKNEAPTGVAYTSQNQSVAAF+AADKVAFYHC FY
Sbjct: 121 QSSSDNVESATFSVEAPHFIAFGISFKNEAPTGVAYTSQNQSVAAFVAADKVAFYHCAFY 180

Query: 181 STHNTLFDYKGRHYYDGCYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLTVRGSVTAQNRK 240
           STHNTLFDYKGRHYYD CYIQGSIDFIFGRGKSV+H CE+FVI DKR++++GSVTAQNR+
Sbjct: 181 STHNTLFDYKGRHYYDNCYIQGSIDFIFGRGKSVYHGCEIFVIGDKRVSIKGSVTAQNRE 240

Query: 241 SADENSGNLYH 252
           S  ENSG +++
Sbjct: 241 SEKENSGFVFN 246

[Close]
BLAST of Cp4.1LG03g11960 vs. TAIR10
Match: AT3G17060.1 (AT3G17060.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 315.5 bits (807), Expect = 3.6e-86
Identity = 150/233 (64.38%), Postives = 189/233 (81.12%), Query Frame = 1 

Query: 19  IAFALLISSPIGSYGFTAQNV-INSPLLTKKIATNRTIKVDINGNGEFTSIQAAVDAVPE 78
           +   L++ S  GS     Q    ++PLLT+KIATNR+I VDI G G++TS+Q A+DAVP 
Sbjct: 9   LVLTLVVMSIWGSDASAMQKTKFDAPLLTEKIATNRSIIVDIEGKGDYTSVQKAIDAVPV 68

Query: 79  GNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTHMVWSQSSNDNIESATFKVEAK 138
           GNS W+I+HVRKGIY+E+VHIP +KP+IF+RGNGKG+T +  SQSS DN+ SATFKVEA 
Sbjct: 69  GNSNWIIVHVRKGIYKERVHIPENKPFIFMRGNGKGKTVIESSQSSVDNVASATFKVEAN 128

Query: 139 HFIAFGISFKNEAPTGVAYTSQNQSVAAFIAADKVAFYHCGFYSTHNTLFDYKGRHYYDG 198
           HF+AFGIS +N+AP G+A+TS+NQSVAAF+AADKVAFYHC FYS HNTLFD KGRHYY  
Sbjct: 129 HFVAFGISIRNDAPVGMAFTSENQSVAAFVAADKVAFYHCAFYSLHNTLFDNKGRHYYHE 188

Query: 199 CYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLTVRGSVTAQNRKSADENSGNLY 251
           CYIQGSIDFIFGR  S+F+NCE+FVI DKR+   GS+TA +R+SA+E +G ++
Sbjct: 189 CYIQGSIDFIFGRATSIFNNCEIFVISDKRVKPYGSITAHHRESAEEKTGYVF 241

[Close]
BLAST of Cp4.1LG03g11960 vs. TAIR10
Match: AT2G36710.1 (AT2G36710.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 161.4 bits (407), Expect = 8.6e-40
Identity = 86/207 (41.55%), Postives = 128/207 (61.84%), Query Frame = 1 

Query: 45  LTKKIATNRTIKVDINGNGEFTSIQAAVDAVPEGNSQWMIIHVRKGIYREKVHIPSSKPY 104
           L  +  T+  + VD++G G F+++Q+A+D VP+ +S   +I V  G YREKV +  +K  
Sbjct: 81  LRHQYKTSLVLTVDLHGCGNFSNVQSAIDVVPDLSSSKTLIIVNSGSYREKVTVNENKTN 140

Query: 105 IFLRGNGKGRTHMVWS---QSSNDNIESATFKVEAKHFIAFGISFKNEAPTGVAYTSQNQ 164
           + ++G G   T + W+   +S+ +  +S +F V A +F A+ ISFKN AP      +  Q
Sbjct: 141 LVIQGRGYQNTSIEWNDTAKSAGNTADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQ 200

Query: 165 SVAAFIAADKVAFYHCGFYSTHNTLFDYKGRHYYDGCYIQGSIDFIFGRGKSVFHNCEMF 224
           +VA  I  D+ AFY CGFY   +TL D KGRH++  C+IQGSIDFIFG G+S++ +C + 
Sbjct: 201 AVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTIN 260

Query: 225 VIDDKRLT-VRGSVTAQNRKSADENSG 248
            I     + V GS+TAQ R+S DE SG
Sbjct: 261 SIAKGNTSGVTGSITAQGRQSEDEQSG 287

[Close]
BLAST of Cp4.1LG03g11960 vs. TAIR10
Match: AT5G47500.1 (AT5G47500.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 151.4 bits (381), Expect = 8.9e-37
Identity = 80/205 (39.02%), Postives = 120/205 (58.54%), Query Frame = 1 

Query: 52  NRTIKVDINGNGEFTSIQAAVDAVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNG 111
           ++ I V +NG+ +F S+Q AVD++P+ N++ + I +  G YREKV +P++KPYI  +G G
Sbjct: 58  HKVITVSLNGHAQFRSVQDAVDSIPKNNNKSITIKIAPGFYREKVVVPATKPYITFKGAG 117

Query: 112 KGRTHMVWSQSSND---------NIESATFKVEAKHFIAFGISFKNEAPTGVAYTSQNQS 171
           +  T + W   ++D           ++A+  V A +F A  ISF N AP  +      Q+
Sbjct: 118 RDVTAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQA 177

Query: 172 VAAFIAADKVAFYHCGFYSTHNTLFDYKGRHYYDGCYIQGSIDFIFGRGKSVFHNCEMFV 231
           VA  I+ DK  F  CGFY   +TL D  GRHY+  CYI+GSIDFIFG G+S++ +CE+  
Sbjct: 178 VAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHS 237

Query: 232 IDDKRLTVRGSVTAQNRKSADENSG 248
           I  +     GS+ A  R   +E +G
Sbjct: 238 IASR----FGSIAAHGRTCPEEKTG 258

[Close]
BLAST of Cp4.1LG03g11960 vs. TAIR10
Match: AT1G05310.1 (AT1G05310.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 150.2 bits (378), Expect = 2.0e-36
Identity = 87/204 (42.65%), Postives = 117/204 (57.35%), Query Frame = 1 

Query: 51  TNRTIKVDINGNGEFTSIQAAVDAVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGN 110
           T   + VD NG   FT++Q+AVDAV   + +  +I +  G+Y EKV IP +KP I L+G 
Sbjct: 87  TTSYLCVDKNGCCNFTTVQSAVDAVGNFSQRRNVIWINSGMYYEKVVIPKTKPNITLQGQ 146

Query: 111 GKGRTHMVWSQ---SSNDNIESATFKVEAKHFIAFGISFKNEAPTGVAYTSQNQSVAAFI 170
           G   T + W+    S+N     AT +V    F+A  ISF N AP         Q+VA  I
Sbjct: 147 GFDITAIAWNDTAYSANGTFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRI 206

Query: 171 AADKVAFYHCGFYSTHNTLFDYKGRHYYDGCYIQGSIDFIFGRGKSVFHNCEMFVIDDK- 230
           A D+ AF  CGF+   +TL D +GRHY+  CYIQGSIDFIFG  KS++ +C +  + ++ 
Sbjct: 207 AGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQL 266

Query: 231 ---RLTVRGSVTAQNRKSADENSG 248
                 V G+VTA  R S DENSG
Sbjct: 267 SPGSKAVNGAVTANGRSSKDENSG 290

[Close]
BLAST of Cp4.1LG03g11960 vs. TAIR10
Match: AT5G18990.1 (AT5G18990.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 142.1 bits (357), Expect = 5.4e-34
Identity = 77/199 (38.69%), Postives = 119/199 (59.80%), Query Frame = 1 

Query: 57  VDINGNGEFTSIQAAVDAVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTH 116
           VD +G+G FT+IQ A+D+VP  N+ W  I+V+ G+YREK+ IP  KP+I + G GK  T 
Sbjct: 31  VDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRSTR 90

Query: 117 MVWSQSSNDNIESATFKVEAKHFIAFGISFKNE----APTGVAYTSQNQSVAAFIAADKV 176
           + W   ++   +S TF   A + +   I+F N     +   +    +  +VAAFI  DK 
Sbjct: 91  VEWDDHAS-LAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDKS 150

Query: 177 AFYHCGFYSTHNTLFDYKGRHYYDGCYIQGSIDFIFGRGKSVFHNCEMFVIDDK-RLTVR 236
           AFY  GF    +TL+D  GRHY+  C IQG++DFI G G+S++ +C + V+  +    V 
Sbjct: 151 AFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVT 210

Query: 237 GSVTAQNRKSADENSGNLY 251
           G +TAQ R +A++ +G ++
Sbjct: 211 GYITAQGRTNANDANGFVF 228

[Close]
BLAST of Cp4.1LG03g11960 vs. NCBI nr
Match: gi|659076966|ref|XP_008438961.1| (PREDICTED: probable pectinesterase 67 [Cucumis melo])

HSP 1 Score: 454.9 bits (1169), Expect = 1.1e-124
Identity = 225/251 (89.64%), Postives = 238/251 (94.82%), Query Frame = 1 

Query: 1   MADSSSNSL-CNLIHIAFAIAFALLISSPIGSYGFTAQNVINSPLLTKKIATNRTIKVDI 60
           MADSSSNSL    I+IAF IAFA LISSPIGSY FTAQNVI+SPLLTKKI TNRTIKVDI
Sbjct: 1   MADSSSNSLFIKPIYIAFVIAFAFLISSPIGSYAFTAQNVIDSPLLTKKIGTNRTIKVDI 60

Query: 61  NGNGEFTSIQAAVDAVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTHMVW 120
           NGNGEF SIQAAVD+VPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRT +VW
Sbjct: 61  NGNGEFKSIQAAVDSVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTSIVW 120

Query: 121 SQSSNDNIESATFKVEAKHFIAFGISFKNEAPTGVAYTSQNQSVAAFIAADKVAFYHCGF 180
           SQSS+DN+ESATFKVEA+HFIAFGISFKNEAPTGVAYTSQNQSVAAF+AADK AFYHCGF
Sbjct: 121 SQSSSDNVESATFKVEAQHFIAFGISFKNEAPTGVAYTSQNQSVAAFVAADKAAFYHCGF 180

Query: 181 YSTHNTLFDYKGRHYYDGCYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLTVRGSVTAQNR 240
           YSTHNTLFDYKGRHYYD CYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLT+RGS+TAQNR
Sbjct: 181 YSTHNTLFDYKGRHYYDSCYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLTIRGSITAQNR 240

Query: 241 KSADENSGNLY 251
           KSA+ENSG ++
Sbjct: 241 KSANENSGFVF 251

[Close]
BLAST of Cp4.1LG03g11960 vs. NCBI nr
Match: gi|778679088|ref|XP_011651086.1| (PREDICTED: probable pectinesterase 67 [Cucumis sativus])

HSP 1 Score: 451.4 bits (1160), Expect = 1.2e-123
Identity = 223/251 (88.84%), Postives = 238/251 (94.82%), Query Frame = 1 

Query: 1   MADSSSNSL-CNLIHIAFAIAFALLISSPIGSYGFTAQNVINSPLLTKKIATNRTIKVDI 60
           MADSSSNSL    I+IAFAIAF  LISSPIGSY FTAQNVI+SPLLTKKI TNRTIKVDI
Sbjct: 1   MADSSSNSLFIKPIYIAFAIAFTFLISSPIGSYAFTAQNVIDSPLLTKKIGTNRTIKVDI 60

Query: 61  NGNGEFTSIQAAVDAVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTHMVW 120
           NGNGEF SIQAAVD+VPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRT +VW
Sbjct: 61  NGNGEFKSIQAAVDSVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTSIVW 120

Query: 121 SQSSNDNIESATFKVEAKHFIAFGISFKNEAPTGVAYTSQNQSVAAFIAADKVAFYHCGF 180
           SQSS+DN+ESATFKVEA +FIAFG+SFKNEAPTGVAYTSQNQSVAAF+AADK+AFYHCGF
Sbjct: 121 SQSSSDNVESATFKVEAHNFIAFGVSFKNEAPTGVAYTSQNQSVAAFVAADKIAFYHCGF 180

Query: 181 YSTHNTLFDYKGRHYYDGCYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLTVRGSVTAQNR 240
           YSTHNTLFDYKGRHYYD CYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLT+RGS+TAQNR
Sbjct: 181 YSTHNTLFDYKGRHYYDKCYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLTIRGSITAQNR 240

Query: 241 KSADENSGNLY 251
           KSA+ENSG ++
Sbjct: 241 KSANENSGFVF 251

[Close]
BLAST of Cp4.1LG03g11960 vs. NCBI nr
Match: gi|590661954|ref|XP_007035815.1| (Pectin lyase-like superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 390.2 bits (1001), Expect = 3.2e-105
Identity = 197/338 (58.28%), Postives = 235/338 (69.53%), Query Frame = 1 

Query: 13  IHIAFAIAFALLISSPIGSYGFTAQNVINSPLLTKKIATNRTIKVDINGNGEFTSIQAAV 72
           +H+AFA   A+ I  P  + G +A+ VI+SPLLT+KI+TNRTIKVD+NGNG+FTS+Q A+
Sbjct: 74  MHLAFAAIVAVAICFPGCANGMSAERVIDSPLLTEKISTNRTIKVDLNGNGDFTSVQEAI 133

Query: 73  DAVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTHMVWSQSSNDNIESATF 132
           ++VP+GNSQW+IIH+RKG+YREKVH+P  KPYIFLRGNG+GRT + WSQSS DN  SATF
Sbjct: 134 NSVPKGNSQWVIIHLRKGVYREKVHVPKDKPYIFLRGNGRGRTAIAWSQSSVDNKASATF 193

Query: 133 KVEAKHFIAFGISFKNEAPTGVAYTSQNQSVAAFIAADKVAFYHCGFYSTHNTLFDYKGR 192
            VEAKHFIAFGISFKNEAPTG+AYTSQNQSVAAF+ AD VAFYHC F+STHNTLFDYKGR
Sbjct: 194 TVEAKHFIAFGISFKNEAPTGIAYTSQNQSVAAFVGADMVAFYHCAFFSTHNTLFDYKGR 253

Query: 193 HYYDGCYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLTVRGSVTAQNRKSADENSGNLYHS 252
           HYYD CYIQGSIDFIFGRG+S+FHNCE+FV+ DKR+ +RGS+TAQNR S  +NSG ++  
Sbjct: 254 HYYDNCYIQGSIDFIFGRGRSLFHNCEIFVLQDKRIKIRGSITAQNRGSPQDNSGFVF-V 313

Query: 253 EYDCHGPGAEKGNRAP-------------------------------------------- 298
           E   +G G     RA                                             
Sbjct: 314 EGKVYGIGGVYLGRAKGAYSTVVFAKTYLSRTIVPHGWTDWSYHGGSDHLFHAEYDCRGP 373

[Close]
BLAST of Cp4.1LG03g11960 vs. NCBI nr
Match: gi|590661958|ref|XP_007035816.1| (Pectin lyase-like superfamily protein isoform 2 [Theobroma cacao])

HSP 1 Score: 390.2 bits (1001), Expect = 3.2e-105
Identity = 197/338 (58.28%), Postives = 235/338 (69.53%), Query Frame = 1 

Query: 13  IHIAFAIAFALLISSPIGSYGFTAQNVINSPLLTKKIATNRTIKVDINGNGEFTSIQAAV 72
           +H+AFA   A+ I  P  + G +A+ VI+SPLLT+KI+TNRTIKVD+NGNG+FTS+Q A+
Sbjct: 1   MHLAFAAIVAVAICFPGCANGMSAERVIDSPLLTEKISTNRTIKVDLNGNGDFTSVQEAI 60

Query: 73  DAVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTHMVWSQSSNDNIESATF 132
           ++VP+GNSQW+IIH+RKG+YREKVH+P  KPYIFLRGNG+GRT + WSQSS DN  SATF
Sbjct: 61  NSVPKGNSQWVIIHLRKGVYREKVHVPKDKPYIFLRGNGRGRTAIAWSQSSVDNKASATF 120

Query: 133 KVEAKHFIAFGISFKNEAPTGVAYTSQNQSVAAFIAADKVAFYHCGFYSTHNTLFDYKGR 192
            VEAKHFIAFGISFKNEAPTG+AYTSQNQSVAAF+ AD VAFYHC F+STHNTLFDYKGR
Sbjct: 121 TVEAKHFIAFGISFKNEAPTGIAYTSQNQSVAAFVGADMVAFYHCAFFSTHNTLFDYKGR 180

Query: 193 HYYDGCYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLTVRGSVTAQNRKSADENSGNLYHS 252
           HYYD CYIQGSIDFIFGRG+S+FHNCE+FV+ DKR+ +RGS+TAQNR S  +NSG ++  
Sbjct: 181 HYYDNCYIQGSIDFIFGRGRSLFHNCEIFVLQDKRIKIRGSITAQNRGSPQDNSGFVF-V 240

Query: 253 EYDCHGPGAEKGNRAP-------------------------------------------- 298
           E   +G G     RA                                             
Sbjct: 241 EGKVYGIGGVYLGRAKGAYSTVVFAKTYLSRTIVPHGWTDWSYHGGSDHLFHAEYDCRGP 300

[Close]
BLAST of Cp4.1LG03g11960 vs. NCBI nr
Match: gi|1009131986|ref|XP_015883141.1| (PREDICTED: probable pectinesterase 67 [Ziziphus jujuba])

HSP 1 Score: 387.5 bits (994), Expect = 2.1e-104
Identity = 183/238 (76.89%), Postives = 212/238 (89.08%), Query Frame = 1 

Query: 13  IHIAFAIAFALLISSPIGSYGFTAQNVINSPLLTKKIATNRTIKVDINGNGEFTSIQAAV 72
           IH   AI FA+ +      +G  AQ VI+SPLLT+KI TNRTIKVDINGNG+F SIQAA+
Sbjct: 8   IHFGLAIIFAIAVCFSNFGHGLDAQTVIDSPLLTQKIGTNRTIKVDINGNGDFKSIQAAI 67

Query: 73  DAVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTHMVWSQSSNDNIESATF 132
           D+VP GN++W+IIH+RKGIYREKVHIP++KPYIF+RGNGKGRT +VWSQSS+DN+ESATF
Sbjct: 68  DSVPVGNNRWVIIHIRKGIYREKVHIPANKPYIFMRGNGKGRTAIVWSQSSSDNVESATF 127

Query: 133 KVEAKHFIAFGISFKNEAPTGVAYTSQNQSVAAFIAADKVAFYHCGFYSTHNTLFDYKGR 192
           KVE+ HFIAFGIS KNEAPTGVAYTSQNQSVAAF+AAD+VAFYHCGFYSTHNTLFDYKGR
Sbjct: 128 KVESPHFIAFGISIKNEAPTGVAYTSQNQSVAAFVAADRVAFYHCGFYSTHNTLFDYKGR 187

Query: 193 HYYDGCYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLTVRGSVTAQNRKSADENSGNLY 251
           HYY  CYIQGSIDFIFGRG+SVFH CE+FVI DKR+T+ GSVTAQNR+SA+ENSG ++
Sbjct: 188 HYYHNCYIQGSIDFIFGRGRSVFHGCEIFVISDKRVTIHGSVTAQNRESANENSGFVF 245

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g11960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PME67_ARATH6.4e-8564.38Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1[more]
PME15_ARATH1.5e-3841.55Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1[more]
PME68_ARATH1.6e-3539.02Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1[more]
PME8_ARATH3.5e-3542.65Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2[more]
PME55_ARATH9.6e-3338.69Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1[more]
BLAST of Cp4.1LG03g11960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAR0_CUCSA8.3e-12488.84Pectinesterase OS=Cucumis sativus GN=Csa_3G166360 PE=4 SV=1[more]
A0A061EPH4_THECC2.3e-10558.28Pectinesterase OS=Theobroma cacao GN=TCM_021377 PE=4 SV=1[more]
A0A061EQW4_THECC2.3e-10558.28Pectinesterase OS=Theobroma cacao GN=TCM_021377 PE=4 SV=1[more]
A0A151RCS3_CAJCA2.8e-10356.13Pectinesterase OS=Cajanus cajan GN=KK1_038189 PE=4 SV=1[more]
M5XR90_PRUPE5.8e-10172.51Pectinesterase OS=Prunus persica GN=PRUPE_ppa017141mg PE=4 SV=1[more]
BLAST of Cp4.1LG03g11960 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G17060.13.6e-8664.38 Pectin lyase-like superfamily protein[more]
AT2G36710.18.6e-4041.55 Pectin lyase-like superfamily protein[more]
AT5G47500.18.9e-3739.02 Pectin lyase-like superfamily protein[more]
AT1G05310.12.0e-3642.65 Pectin lyase-like superfamily protein[more]
AT5G18990.15.4e-3438.69 Pectin lyase-like superfamily protein[more]
BLAST of Cp4.1LG03g11960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076966|ref|XP_008438961.1|1.1e-12489.64PREDICTED: probable pectinesterase 67 [Cucumis melo][more]
gi|778679088|ref|XP_011651086.1|1.2e-12388.84PREDICTED: probable pectinesterase 67 [Cucumis sativus][more]
gi|590661954|ref|XP_007035815.1|3.2e-10558.28Pectin lyase-like superfamily protein isoform 1 [Theobroma cacao][more]
gi|590661958|ref|XP_007035816.1|3.2e-10558.28Pectin lyase-like superfamily protein isoform 2 [Theobroma cacao][more]
gi|1009131986|ref|XP_015883141.1|2.1e-10476.89PREDICTED: probable pectinesterase 67 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0042545cell wall modification
Vocabulary: Molecular Function
TermDefinition
GO:0030599pectinesterase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005618cell wall
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
IPR000070Pectinesterase_cat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042545 cell wall modification
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0030048 actin filament-based movement
biological_process GO:0045490 pectin catabolic process
cellular_component GO:0005618 cell wall
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0045330 aspartyl esterase activity
molecular_function GO:0030599 pectinesterase activity
molecular_function GO:0016829 lyase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g11960.1Cp4.1LG03g11960.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000070Pectinesterase, catalyticPFAMPF01095Pectinesterasecoord: 56..247
score: 3.3
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 50..295
score: 1.45
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 51..246
score: 7.8E-65coord: 247..295
score: 7.2
NoneNo IPR availablePANTHERPTHR31321FAMILY NOT NAMEDcoord: 36..293
score: 1.4
NoneNo IPR availablePANTHERPTHR31321:SF1PECTINESTERASE 67-RELATEDcoord: 36..293
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g11960Cucsa.252510Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g11960CmaCh14G015880Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g11960CmoCh14G016180Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g11960Cla021800Watermelon (97103) v1cpewmB613
Cp4.1LG03g11960Csa3G166360Cucumber (Chinese Long) v2cpecuB609
Cp4.1LG03g11960MELO3C006718Melon (DHL92) v3.5.1cpemeB585
Cp4.1LG03g11960ClCG05G006580Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g11960CSPI03G15020Wild cucumber (PI 183967)cpecpiB611
Cp4.1LG03g11960Lsi05G014180Bottle gourd (USVL1VR-Ls)cpelsiB507
Cp4.1LG03g11960MELO3C031619.2Melon (DHL92) v3.6.1cpemedB693
Cp4.1LG03g11960CsaV3_3G015210Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g11960Bhi01G000784Wax gourdcpewgoB0783
Cp4.1LG03g11960CsGy3G015140Cucumber (Gy14) v2cgybcpeB406
Cp4.1LG03g11960Carg19619Silver-seed gourdcarcpeB0395
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g11960Silver-seed gourdcarcpeB0106
Cp4.1LG03g11960Silver-seed gourdcarcpeB0986
Cp4.1LG03g11960Silver-seed gourdcarcpeB1320
Cp4.1LG03g11960Wax gourdcpewgoB0766
Cp4.1LG03g11960Cucurbita pepo (Zucchini)cpecpeB184
Cp4.1LG03g11960Cucurbita pepo (Zucchini)cpecpeB337
Cp4.1LG03g11960Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG03g11960Cucurbita maxima (Rimu)cmacpeB403
Cp4.1LG03g11960Cucurbita maxima (Rimu)cmacpeB837
Cp4.1LG03g11960Cucurbita maxima (Rimu)cmacpeB928
Cp4.1LG03g11960Cucurbita moschata (Rifu)cmocpeB365
Cp4.1LG03g11960Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g11960Cucurbita moschata (Rifu)cmocpeB862
Cp4.1LG03g11960Bottle gourd (USVL1VR-Ls)cpelsiB484
Cp4.1LG03g11960Watermelon (Charleston Gray)cpewcgB562
Cp4.1LG03g11960Watermelon (97103) v1cpewmB623
Cp4.1LG03g11960Melon (DHL92) v3.5.1cpemeB555
Cp4.1LG03g11960Melon (DHL92) v3.6.1cpemedB659