Cp4.1LG03g10910 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTAGCTTGGGAAAGTTGGAGACTGGTTTTCAGCTCAAGAAAATCCGGCATTCTGAACCCTGCTAAACCCCTACCACCGGCGGAGGTCTTAAAAGATGGGGAAGAAGAAGCATAAGCGACCGGAATCGGAGTCGGAGGCACTTGACGGAGGCGATTTTGAAGCTCGGCATGAAACTGAGCTCATTAATGGATGCTCTTCTGAGACGAAGAAGAAGAAGAAGAAGAGGAAGAAGCAGAATGTTGAGAATGAGGAAATCGAGGGGGAGAAGAGGAAACCGATTTCAAAACCTACAGTGAGCATGGCAGTATCCGGTTCCATCATTGATAACGCTCAATCCCTTGAGCTTGCCACCAGAGTACGCATTTTCTATTTTATGAGCGAGTGTTTTTCGAGTTCTTCCCCCTTTCCCATGTCCCGTGGAGGATGATATTTGTTATGCCTTCTCTTTGAATGTTTTGATTAGTTCTCTTTTCTCTATGCATCTCTACTACTGAAATGGAGTGATGTGATTAATTATGAAACAACTTATGGACTTCTTTCCAGTTGGCTGGTCAAATCGCTCGAGCGGCAACCATATTCCGAATTGACGAGGTCTCCATCTTTTTCATTTGTTTCATCCTCTTCTTTGCTTCAAATTTTCTAGAACAGTTATTGGCATCATCACTGGAATTGTTCAACTCAGGAAGATAGTTTTTGTATGTATCAGGTGGTGGTATTTGACAGTGGAAGGAGTTCAATGACTGGCTCGGATGTTGCGGCAGCTAACAATTCAGATGAGGATGAAAGTGGCGCTGCTTTTCTTATAAGGATCTTGAAGTATCTTGAGACTCCACAATACTTGAGAAAAGCTCTTTTCCCAAAGCACAACAATTTAAGATTTGTGGTCCGGCCTAAACATTCCTTGGTTGCTTTAATCAAAGAAGTAATATGTTCTGTTTTTCTTCTGACCTTTTTATTGTGAATTTGTTATAGGGGATGTTGCCCCCGCTTGATGCCCCTCACCATTTGCGCAAGCATGAATGGGGTCCCTATCGAGAAGGTAAATTTTGAAATCTCCTTATGGGTTTTCTATAAAATTTGCATCTGAATCTTTGCCCTGCATGTGAGGATATTGTTCCCTTTCTTGTTCCAAGCACACCTTTGAAACTATAGCTTTTAGTTGCATTAATCTCGAGGATCGTCGTCGTACTTTTGAACTTTGGGCTATACAACAATTCCTGGAGATTCATTTTTCTCAATGTATAAGCTTCTCTTTACCGCTTCTCAGAATCTATAAAGATATTGCTAGTGATTTTGTTCATCTTCTGTCTGATAATTTCTTTAATGCTGGAGTAACATAGTTTGGAGAAGTTTTCCATTCCACATTTGCAACTGTCGCTTGAAAAATTCAAGTTTCTTCTATTCATTTTGGAAGACTCTTGAAGATGAGTCTAGGACTGGGACTATATAATTACATGCATATCTATCTGGCTATATCTTTGGATGACTTCTGATTTATTATGTTGCCATCCTCGGCTACTGCCTTCTTTTTTTTTTTTTTCACTTTTCATTTTGGACTTCATTTTGCATGTTAAAATTAGGTGTTACCTTGAAAGAAAGAGCTCCAGATGCTAGAGGAACATTAGTTGATGTTGGTTTGAGTAAGGTAAAGCCAAATTTTCTCGAGTATATAGAATGGAAACACAATTTTTTTCCTACGTTGAGCTTGAGCTATGCTACCTGTTGGTTTTTAGATGAATTGGAAAGTGTACGCTAATTCAATTTCTCTTTGATTTTTTTGAAGTTAAATGCTTCCAACAACCATATTTTACTTAACTGGGTGTAGTTCGTTGGTTTAATAATTTGATTTTAAATTGTGCAGAACGTGGTAGTTGATGAAATACTTGAACCCGGAAGAAGAGTAACAGTTGCTATGGGAACAGATCGCAATTTACTTGCTGGTATTGTCTGATGCTAGTACATATTTGAATAAAATATACAAATGTACAAATTGACAGTTGTTTTAATCCCTGCTAGTCTATAGTAGATGCCTTGATTAGTATTGGCTCTATGCTTGTACTTTTAATGTAATGCTTCAAGCCCACCACTAGCAGATATTGTCCTCCCACCACTAGCAGATATTGTCCTCCCACCACTAGTAGATATTGTCCTCTTTGAGTTTTTCCTTTCGGGCTTTTCCTCAAGGTTTTTAAAATGTCTCTACTAGGGAGAGGTTTCCACACCTTTATAAAGGATGATTCGTTCTTCTCTCCAACCGATGTAGGATCTCACATTTAAAGTGTGCAACACTTATTGATGTCTACAAGTGTTATTTAAAAACTGGTAAAAAGAGAATATGGACACCAAAAATTAGAGTTTTGTAACTTAGCTGCAGTGAAAATACATTATTAGACTATATCTATTAATTGTTTTCCGAAAAACCAATAAACTAGTGACTGCTGGCTAAGCTCGTTCAGCTGTCATCTGCCACAATCCTAGTTCAGTCTCCACTTTCATGCGCACTTAATTGTCGTCATACATGTGTTAGTCATGCTAATGCAAGTTTGTCATAAATGGAAAATGAGTATTTGCTCATGGATTTCAAAATCCTAAACTTCATTTGTCCAGATCTACCCCGCCAGGTTGTCTCATCTTCAAAGCCTGTGGAAGAAGAACTTTACTGGGGTTATAGAGTGCGATATGCTTCTTCTTTGAGTGCAGTTTTTAAGGAGAGTTCATACGAGGTATATGCTTATAACTTTTCGTGAATCTTCTAAAAATTAATATCATTTTCTTCACATTTTATTGCTGTTTTGTTGCAAGGGTGGTTATGATCACTTGATTGGAACCTCAGAGCATGGAACAATAATTAAGTCCTCGGAACTAATACTACCTTCTTTCAGGTATTTTGCTTAAGTCCACCGCCATGTGACCTGGGTAGTTCGGTTTCAAACTGATACCTTTAGCACATGTTGCTCGTTGATTTCTTGTTACCCTTGTGCTAATTAATTGTGTTTAAATATAAAAATGAAATGGTTGTTGTTTTTCTTTTTGTTCCATTTTTCTCGTCATTTACAATGTCATATAACAGAAGTTAGCATCTTTAATGTCTTTGAACTATATTCAGTGGGTTGAACTCAAATCTTGAGAATTTTTACCATAGCTGTACGAATACCCCTTTCATCATAGCCACCAAACTTACAGAAGCATATGCTGGCTTTATTAACATTATAGTTTGTAATGGAAAAATGTGTCTAAGAGGGGCTTTTAAAGAACAGTATTAAAGGCATCTTGCCAATTAAATGTATGGCGAGCCTCTGTTTTATGCATTTTCAACAGACGATGTAAAAAGGTTCCATTTTTTTAAAGAACTTATATGCATTTTCTCACATGAACAATTCTCTGTCCGAGCCAGATTGTTTCAATTGACAAGCATCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTCTGCCTTTTGAGTTGATTAATTGTTAATCATTGGCAGACATCTTTTAATTGCCTTTGGTGGACTTGCCGGTTTGGAGGAGAGCATTGAGGAAGATAACAACTTCAAGGTGTTCATCTTAATAACTTCACGGACATAGTACCATAGGCTAATCTTTCAATGAAATGATAGTTCTTAAAAGCACTCATCTAGTAATCTTTAAAGCATTTGATAGTTATAAAATGAACTAAATAAAAATTATGTTTCTGTCTTTGGATTACTTAAGTAAATAGTTAATACTAACATGTCGTGACTGTTTCGATCGGTTAGAGTAAAAATGCTTGTGAGATCTTTTCTTCGTACTTGAATACATGTCCACTGCAAGGAAGCCGAACAATTCGAACAGAGGTACTCCACCATTATCATCTCCTCTATTTTCTTTTTCATTCCTGCATATTCTCTCATTTAAGCTTGCTTGGTCTTTAGGAAGCAATACTCATCTCTCTCCAGTACTTCCAAGAACCGATAAGCAGGGCATTGCAGATTTCAGCAGATTAGATTTGATTGTTAGAAGCTTCAAAATCCAAGATCCTGCCAATGTGCTCGCATGGAGCCGCTTTCCCACATGGCTTGAACTTGGGCAGCTGATTCAGTTGTGCTCACAAAAGGGTTTAAAGATACGTCCGTCCCTTCTATGTTGTAACTTTAATTGTCCTTCAAATTTGGACGCTTTAATTCATATATATGTTTTGTTTTGAACTTCTAGGCCTTCAGAATATGAACAATATGTGGGTTATTGAAATGGAACCCATTTTCATCTATTGTGTCTGTTACAGATCTCCAATCAGAAATGTCTCCATAACTCAAGAACAAATGAAAAAGAAGAAAGCATAGGGTGGCTATTGCCAAATTGCCGTCTGTCTGATAAATTTTAGAGTGAACTATGGGGAGTCTTTAGAATGAACCCATCTTCGCAGTCCAAAGTCTTCACATTTTTTATAAATGCTCTAGTCGTAGCTCTTAAGATTAAAGCTATGATACCAACTGTCACGGTTGTACTTTTTCAGCCGTGCAGCGTCGTGATCT CGTAGCTTGGGAAAGTTGGAGACTGGTTTTCAGCTCAAGAAAATCCGGCATTCTGAACCCTGCTAAACCCCTACCACCGGCGGAGGTCTTAAAAGATGGGGAAGAAGAAGCATAAGCGACCGGAATCGGAGTCGGAGGCACTTGACGGAGGCGATTTTGAAGCTCGGCATGAAACTGAGCTCATTAATGGATGCTCTTCTGAGACGAAGAAGAAGAAGAAGAAGAGGAAGAAGCAGAATGTTGAGAATGAGGAAATCGAGGGGGAGAAGAGGAAACCGATTTCAAAACCTACAGTGAGCATGGCAGTATCCGGTTCCATCATTGATAACGCTCAATCCCTTGAGCTTGCCACCAGATTGGCTGGTCAAATCGCTCGAGCGGCAACCATATTCCGAATTGACGAGGAAGATAGTTTTTGTATGTATCAGGTGGTGGTATTTGACAGTGGAAGGAGTTCAATGACTGGCTCGGATGTTGCGGCAGCTAACAATTCAGATGAGGATGAAAGTGGCGCTGCTTTTCTTATAAGGATCTTGAAGTATCTTGAGACTCCACAATACTTGAGAAAAGCTCTTTTCCCAAAGCACAACAATTTAAGATTTGTGGGGATGTTGCCCCCGCTTGATGCCCCTCACCATTTGCGCAAGCATGAATGGGGTCCCTATCGAGAAGGTGTTACCTTGAAAGAAAGAGCTCCAGATGCTAGAGGAACATTAGTTGATGTTGGTTTGAGTAAGAACGTGGTAGTTGATGAAATACTTGAACCCGGAAGAAGAGTAACAGTTGCTATGGGAACAGATCGCAATTTACTTGCTGATCTACCCCGCCAGGTTGTCTCATCTTCAAAGCCTGTGGAAGAAGAACTTTACTGGGGTTATAGAGTGCGATATGCTTCTTCTTTGAGTGCAGTTTTTAAGGAGAGTTCATACGAGGGTGGTTATGATCACTTGATTGGAACCTCAGAGCATGGAACAATAATTAAGTCCTCGGAACTAATACTACCTTCTTTCAGACATCTTTTAATTGCCTTTGGTGGACTTGCCGGTTTGGAGGAGAGCATTGAGGAAGATAACAACTTCAAGAGTAAAAATGCTTGTGAGATCTTTTCTTCGTACTTGAATACATGTCCACTGCAAGGAAGCCGAACAATTCGAACAGAGGAAGCAATACTCATCTCTCTCCAGTACTTCCAAGAACCGATAAGCAGGGCATTGCAGATTTCAGCAGATTAGATTTGATTGTTAGAAGCTTCAAAATCCAAGATCCTGCCAATGTGCTCGCATGGAGCCGCTTTCCCACATGGCTTGAACTTGGGCAGCTGATTCAGTTGTGCTCACAAAAGGGTTTAAAGATACGTCCGTCCCTTCTATGTTGTAACTTTAATTGTCCTTCAAATTTGGACGCTTTAATTCATATATATGTTTTGTTTTGAACTTCTAGGCCTTCAGAATATGAACAATATGTGGGTTATTGAAATGGAACCCATTTTCATCTATTGTGTCTGTTACAGATCTCCAATCAGAAATGTCTCCATAACTCAAGAACAAATGAAAAAGAAGAAAGCATAGGGTGGCTATTGCCAAATTGCCGTCTGTCTGATAAATTTTAGAGTGAACTATGGGGAGTCTTTAGAATGAACCCATCTTCGCAGTCCAAAGTCTTCACATTTTTTATAAATGCTCTAGTCGTAGCTCTTAAGATTAAAGCTATGATACCAACTGTCACGGTTGTACTTTTTCAGCCGTGCAGCGTCGTGATCT ATGGGGAAGAAGAAGCATAAGCGACCGGAATCGGAGTCGGAGGCACTTGACGGAGGCGATTTTGAAGCTCGGCATGAAACTGAGCTCATTAATGGATGCTCTTCTGAGACGAAGAAGAAGAAGAAGAAGAGGAAGAAGCAGAATGTTGAGAATGAGGAAATCGAGGGGGAGAAGAGGAAACCGATTTCAAAACCTACAGTGAGCATGGCAGTATCCGGTTCCATCATTGATAACGCTCAATCCCTTGAGCTTGCCACCAGATTGGCTGGTCAAATCGCTCGAGCGGCAACCATATTCCGAATTGACGAGGAAGATAGTTTTTGTATGTATCAGGTGGTGGTATTTGACAGTGGAAGGAGTTCAATGACTGGCTCGGATGTTGCGGCAGCTAACAATTCAGATGAGGATGAAAGTGGCGCTGCTTTTCTTATAAGGATCTTGAAGTATCTTGAGACTCCACAATACTTGAGAAAAGCTCTTTTCCCAAAGCACAACAATTTAAGATTTGTGGGGATGTTGCCCCCGCTTGATGCCCCTCACCATTTGCGCAAGCATGAATGGGGTCCCTATCGAGAAGGTGTTACCTTGAAAGAAAGAGCTCCAGATGCTAGAGGAACATTAGTTGATGTTGGTTTGAGTAAGAACGTGGTAGTTGATGAAATACTTGAACCCGGAAGAAGAGTAACAGTTGCTATGGGAACAGATCGCAATTTACTTGCTGATCTACCCCGCCAGGTTGTCTCATCTTCAAAGCCTGTGGAAGAAGAACTTTACTGGGGTTATAGAGTGCGATATGCTTCTTCTTTGAGTGCAGTTTTTAAGGAGAGTTCATACGAGGGTGGTTATGATCACTTGATTGGAACCTCAGAGCATGGAACAATAATTAAGTCCTCGGAACTAATACTACCTTCTTTCAGACATCTTTTAATTGCCTTTGGTGGACTTGCCGGTTTGGAGGAGAGCATTGAGGAAGATAACAACTTCAAGAGTAAAAATGCTTGTGAGATCTTTTCTTCGTACTTGAATACATGTCCACTGCAAGGAAGCCGAACAATTCGAACAGAGGAAGCAATACTCATCTCTCTCCAGTACTTCCAAGAACCGATAAGCAGGGCATTGCAGATTTCAGCAGATTAG MGKKKHKRPESESEALDGGDFEARHETELINGCSSETKKKKKKRKKQNVENEEIEGEKRKPISKPTVSMAVSGSIIDNAQSLELATRLAGQIARAATIFRIDEEDSFCMYQVVVFDSGRSSMTGSDVAAANNSDEDESGAAFLIRILKYLETPQYLRKALFPKHNNLRFVGMLPPLDAPHHLRKHEWGPYREGVTLKERAPDARGTLVDVGLSKNVVVDEILEPGRRVTVAMGTDRNLLADLPRQVVSSSKPVEEELYWGYRVRYASSLSAVFKESSYEGGYDHLIGTSEHGTIIKSSELILPSFRHLLIAFGGLAGLEESIEEDNNFKSKNACEIFSSYLNTCPLQGSRTIRTEEAILISLQYFQEPISRALQISAD
BLAST of Cp4.1LG03g10910 vs. Swiss-Prot
Match: CI114_MOUSE (Putative methyltransferase C9orf114 homolog OS=Mus musculus GN=D2Wsu81e PE=1 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 3.4e-67 Identity = 156/343 (45.48%), Postives = 207/343 (60.35%), Query Frame = 1
BLAST of Cp4.1LG03g10910 vs. Swiss-Prot
Match: CI114_HUMAN (Putative methyltransferase C9orf114 OS=Homo sapiens GN=C9orf114 PE=1 SV=3) HSP 1 Score: 251.9 bits (642), Expect = 1.1e-65 Identity = 160/379 (42.22%), Postives = 219/379 (57.78%), Query Frame = 1
BLAST of Cp4.1LG03g10910 vs. Swiss-Prot
Match: YMP6_CAEEL (Putative methyltransferase B0361.6 OS=Caenorhabditis elegans GN=B0361.6 PE=3 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.1e-41 Identity = 127/347 (36.60%), Postives = 185/347 (53.31%), Query Frame = 1
BLAST of Cp4.1LG03g10910 vs. Swiss-Prot
Match: Y1688_HALSA (Uncharacterized protein VNG_1688C OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=VNG_1688C PE=4 SV=2) HSP 1 Score: 84.7 bits (208), Expect = 2.3e-15 Identity = 90/323 (27.86%), Postives = 138/323 (42.72%), Query Frame = 1
BLAST of Cp4.1LG03g10910 vs. Swiss-Prot
Match: Y1612_HALMA (Uncharacterized protein rrnAC1612 OS=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rrnAC1612 PE=4 SV=2) HSP 1 Score: 78.2 bits (191), Expect = 2.2e-13 Identity = 90/320 (28.12%), Postives = 140/320 (43.75%), Query Frame = 1
BLAST of Cp4.1LG03g10910 vs. TrEMBL
Match: A0A0A0LAE4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G149370 PE=4 SV=1) HSP 1 Score: 641.0 bits (1652), Expect = 9.4e-181 Identity = 336/377 (89.12%), Postives = 347/377 (92.04%), Query Frame = 1
BLAST of Cp4.1LG03g10910 vs. TrEMBL
Match: A5ASC7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012192 PE=4 SV=1) HSP 1 Score: 485.3 bits (1248), Expect = 6.6e-134 Identity = 264/375 (70.40%), Postives = 301/375 (80.27%), Query Frame = 1
BLAST of Cp4.1LG03g10910 vs. TrEMBL
Match: D7T6U1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02950 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 1.1e-133 Identity = 264/375 (70.40%), Postives = 300/375 (80.00%), Query Frame = 1
BLAST of Cp4.1LG03g10910 vs. TrEMBL
Match: B9RTY3_RICCO (Protein C9orf114, putative OS=Ricinus communis GN=RCOM_0913800 PE=4 SV=1) HSP 1 Score: 474.9 bits (1221), Expect = 8.9e-131 Identity = 260/380 (68.42%), Postives = 305/380 (80.26%), Query Frame = 1
BLAST of Cp4.1LG03g10910 vs. TrEMBL
Match: A0A067G5A9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017050mg PE=4 SV=1) HSP 1 Score: 474.2 bits (1219), Expect = 1.5e-130 Identity = 258/380 (67.89%), Postives = 300/380 (78.95%), Query Frame = 1
BLAST of Cp4.1LG03g10910 vs. TAIR10
Match: AT5G19300.1 (AT5G19300.1 Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Protein of unknown function DUF171 (InterPro:IPR003750)) HSP 1 Score: 440.7 bits (1132), Expect = 9.4e-124 Identity = 246/383 (64.23%), Postives = 291/383 (75.98%), Query Frame = 1
BLAST of Cp4.1LG03g10910 vs. NCBI nr
Match: gi|778678539|ref|XP_004134144.2| (PREDICTED: putative methyltransferase C9orf114 [Cucumis sativus]) HSP 1 Score: 641.0 bits (1652), Expect = 1.3e-180 Identity = 336/377 (89.12%), Postives = 347/377 (92.04%), Query Frame = 1
BLAST of Cp4.1LG03g10910 vs. NCBI nr
Match: gi|659076473|ref|XP_008438700.1| (PREDICTED: uncharacterized protein C9orf114 [Cucumis melo]) HSP 1 Score: 639.0 bits (1647), Expect = 5.1e-180 Identity = 335/377 (88.86%), Postives = 346/377 (91.78%), Query Frame = 1
BLAST of Cp4.1LG03g10910 vs. NCBI nr
Match: gi|147790065|emb|CAN75987.1| (hypothetical protein VITISV_012192 [Vitis vinifera]) HSP 1 Score: 485.3 bits (1248), Expect = 9.4e-134 Identity = 264/375 (70.40%), Postives = 301/375 (80.27%), Query Frame = 1
BLAST of Cp4.1LG03g10910 vs. NCBI nr
Match: gi|225432580|ref|XP_002277845.1| (PREDICTED: putative methyltransferase C9orf114 [Vitis vinifera]) HSP 1 Score: 484.6 bits (1246), Expect = 1.6e-133 Identity = 264/375 (70.40%), Postives = 300/375 (80.00%), Query Frame = 1
BLAST of Cp4.1LG03g10910 vs. NCBI nr
Match: gi|743785814|ref|XP_011026090.1| (PREDICTED: putative methyltransferase C9orf114 isoform X1 [Populus euphratica]) HSP 1 Score: 476.9 bits (1226), Expect = 3.4e-131 Identity = 264/373 (70.78%), Postives = 302/373 (80.97%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |