Cp4.1LG03g10580 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g10580
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLeucine-rich repeat protein kinase family protein
LocationCp4.1LG03 : 11666939 .. 11672011 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCTCCCAAAATGATGTGGGCACTCCCATCTATCAACTGGCGTAACTAACTATGATGGGTATTTATTTTTTTTCCGACTCTCACTGGATGTTTAGGGTTTATTTTGTTAACTCATGCACCAGGAGCTCGTTGATCTTCTGATGTTTCATTCCACGATGCACGCTTCAAATTCTTTTGCCTTACGAAGAGATCCATTTTTCAAGCCGCTGTCGCCCCCAATGCAGCTTCTTAACTCTGAAGAAACGGTCGATGACTCCTCAGAAAGCGGCCTTGAGGAGACACGGAATTTGAAGGCTTCTGAGTTGGCTTCGTTTGAGGATGACAATGGAAATGATGCGGATGATTTGGTTCTCGATGTCTCGGGGAGAAACTTGGCTTCCAATTTCTTGGAGGGTTCCAACAGCTCAGTGAAGGGTCTGGACGTATTTCGGAATGCGTTAAATTTGATCCCGAAATCAGTTGGCGACTTTAGCGAACTGAGAAGGCTTCAGTTCTTCGGAAACGAGATTAACTTGTTTCCGCCAGAGTTGAAGAACTTTGTCGGGTTGGAATGCTTACAGGTGAAGTTATCATCACCGGGTTTTGGTGGTTTATCATTACACAAACTGAAGGGCCTGAAGGAGCTCGAGCTATCGAAAATTCCTCCTAAACCTTCCTCGTTTTCAATTCTTAGTGACATTTAATAAATCTGAAGGAAATCTCCTCGTTTTGGTGGTTTGGTGTACCGTTTTCAATTCTTGGAGTATCTAGACCTCTCATTTAATAAGATGAAGAGCCTTCCAGCATAATAGGCTATTTGAATGCGTTGATATCCTTGAGAGTTGCTAATAACAATTTGGTGGAACCGCCTCCAGGTTTGTCTTCCCTGCAAAAGTTGGAGAACTTGGATCTTTCAAGTAATAGGTTGACATCATTGGGGTCTCTTGAACTTGTATCTCTGCATAGCCTTAGAAACTTGAATTTACAGGTTTTTTCTATTGGTTCTGTCGTTTGTTCTTATTGAAGGAAAAAAAAAAAAAATCTGATTTATGTATATTTACATAGTTTCTTTGGGAAGTTGGTAGTTGAATGGTTTGGCATAGTTAGTTCCTATTCACTTAAATTTAGTGTTCACTTTTCTATTATGTATTGGAACAACATAATGTATTTTTAATTTAGTTTTTGCTATGCCTTTCCTCTGTGGTATAGTACAATAAGTTTCTTAAAAGCTGTTAGATACCCTCTTGGATATGCTGCAAGTTTGAAGGAAATCATGAAGATGATACAGCTAATGAAGAATGGATTAGTTTTACAGTTGAAATGGATGTTTATGAAGCCAACATTCAAGACAATGGAGATAGCATTCCCCATAAAGGGGTGTTATGCCAAAATTGTGTGCACAATTATTGGATATGAACTTTTCATTTTGGTTCTTTGATTTTCATTGTTCAGGACTTTTTTCTTTTTTTTTTTGCAGGTCCTCGTAATCTCTCATCGAACCTATTAATGGGACCTTCAATGAATAGTAGATCTTTTGCATCTCGAAGATCAGGTACGGAGATGACATTATTTACAGCAGAAAGCTCGACAGGAACGCGTGAACAGAATCAGGAAGTGGAAAGGAGTAGATCATCATATTGTAGTTAAGATTCATGAAAATCACGAACTTGGGAGGCTTGATTCTGCCCCTGCTTCTGATTGTACAGTTGAAGATTCATCAGTTAATGATGAGTCATATGATAGTAAAGAAACCTGTCACAGAGCTGAAAGGGAAAATCTTATCAAGAGTCATGAGAATGACAATTTTGATACTAAAAAGAAATTTTCTGTGGAGGATTGCACATGTATCTGTGATGCTACTGCAGAAACAATGGCAAGGGACACAAATGAATATTGTGAGTCCTGTGGGGTTTTGCCGCCAACAGGCAAAGGATCATCTTTACAAATATCAAACGATAATGCTAAGTTGAAAAGATATTCTGAGAGGGAACTTGATAACCCTAAACCTTGCAAGTCAAGAAGGCCAGCTGAAGATAGCTCAAGGTTAACTTGCAAGTACAATAGTACCTCATTTTGCGGTGTTGATGAACATCTGCCTGATGGATTTTATGATGCAGGACGTGATTATCCCTTCATGCCATTAAGGAATTATGAGCAAAATTTCCTTCTTGATTCACGCGAAGTCATTCTTGTCAACGGGTGATTATTTTCTGAGTAGCTTGAGTATCCAATGACTTTCATACTGGGGAGTAGAAATTGATACTTATTATTTGTATGTGTTTCCAGGGAACACGATGAAGTATTAGATTCTATAGCAATATCTGCCAAATTCCCATCGAGACATCAAAAGTGAAAATATTGTAATTGATTTTGACGAACAATCTGATGGAGTTCCCATCGTTAAGCTTTGTGATTTTGATAGAGCAGTGCCCCTTCGATCTTTATTGCACTCTTGTTGCATTGCTCATACTGGATCCTGATGTTTGTGTTGGAACACCTCGATGGATGGCTACTGAAGGTTTACGAGCAATGCATACACCGAGTGTTTATGGACTGGTATGTAGATTAGCTTTTCATTTTTTCTATTGAATATTCAAGCTTTCAGATCAAGGTTTCTTTTTGACACTTGTGAATCATTCTTAATGTGTTGTACATTTTCTGACAACTTATTCAACAGTGGAATGGAAATATGCCATAGAATTAGGACACTAACTTGGTGTGGATCATATGCAATAAATTTCTGGACCTAGGGTCCTGCCAGATTCACGGCACAACAAAACATTAGTGCAGCTGAAGTATGTCGTGAAAGTTGAGGCCTATTTCAGAAGAATAACTCAGTTAAACCCATTTTTTACCCTTCACTCTTGTGCCATGAAATTTCTCCTTGAAATCAGGAAGTATCTCTGCAGGAGTGGTGCCCTACAGCTGTGAGGTCTGAGGCAGCAGCAAGATCGCAAAGATCTCTGGCATATGTTGTCCAAGACATTTGGGTTCAGGGTGTTCTGCTAGCAAGCAGGATGCTGGGAATTGTAACTTTGTTGGAACTACGGTAGGAAGGAATTCATAATTCCAGGGAGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGAGAAGTTGAGGTATATGAGATTTAGGCTGGCTGACTCTGAAGAATGTGGAAATGCGAGGATAAGGCAATATTCTTCTTAATTCCTTATGAGCTGAAAGGAAGACTGATTTTTGCAGCCCCTTTTTTGAAAATAGAGATGGTTCAAACATTAGTCAAGGCCAAGTAAAACCATTAGCCAGGGGTAATATTGCCTTTTGCCTGTAAAACCATTAGCCAAGTACTTGACGGGAGTTGTTAGGTGGCAGTACTAGGAAGGAGCGACGTGTGGGGATGAGACAAGCAAATCTTTAGCTGAGGATCAAACAGACTCTAGTGTTTTTGGGTAGCCCAAGCTTCTCAAATATTTGGAGATCATTCTGCTTCAGTCCTGTTATTCTCCAGTTCACTTTTGCGAACTAGTGTAGAAGTTTATGTTGTCTTATTTTCGCACCTCATTTGCATTTAATTATGCAACTATGTTCGCAAGTTGTCATGATGTCGATAACTGGATGATATTCATTCTTTCCTTTGGTTGCAGGAAGTGGATATTTGGTCGTTTGGATGTCTGTTATTGGAACTGTTGACCTTGCGAATTCCATACTTGGGACTTACAGAATTGCAAATCTTCGATCAACTTCAGGTTTCTTCTATTCTTGATTTAGATTCCCATGTCCCAGGACCATTTAAAAAGAATTTGGCACAGCATGCTTGAATCTCTCACCTTTTTTTGAAAGTGAAGTTGTCATTTAGATTCAATATTTAAAGGTGTAGGATGTTCCCTGATCAATAATTGTTTTCTCAATCTGAGCAGATGGGCAAACGACCAGAATTGATAGGTGAGCTTGAGGCATTGGCCCCAGAATAGTTAGGCTCACAGATTGATTTAGGATACAGTGGCCAAGTAATCAGATAGAATATCTAATTGTAATGTATTTAAAATCCACCATGGCTCAAGAGAAATTTAACTCCGTCCAATCTATTGATGGGAGCTTTCTCCAAACCTCCGAAAAAAGCATGAAAAAAAAAAAGCTCGATTAGTATGATCCCTCCATAACCTCAGGATGAAAGGGACGATCTCGTAGCTCTTGGTCTATGAAGATAATCATTAGGTGTTTTGTCTTATTAGACTCCAGAATGAAAGAGACGATCTCGTAGTTCTTGGTATGTGAATATATATTGTTAGGTGCTTTGCCTTATTAACCTTATTAGACAAGAAGGAAGAATCACAATATTGTGATGTTGATAGAACTTGAGGTTGCTTGAAATCTTCATTAGTTGTACCTCATCATTATCAATTATTTTGACCATGCTTTCTTCGACTGTCCTTGAAAAGGCGAGTTGCATTGACATGCTTTCTTCAACTGTCCATGAGAAGCGAGTTGCATTGACATTTTAGCTTTATGTAGGTTCCTTGAAGTCCATGCGGATATGTTCATATCATAACATTCATGTTCCCTCATTCAGTCCTCTTATCTCCCTTCATTTGGTAGGTCTCCAAGTGTTGTACAATTAAGTAGGAGTAGCCTGAGATTGTTTATTCAAATCATTACCTTCTCATCTCTCATAAGATGATGCTAGGACATAGTTGGGTTATGGATCGAGATGGATATGGATTAAATAACCCAACGAGTTCAAACAAACTTGAAACTTGATAAGCATTGGCATTGGCATTGGCATTGTTAAATTAGAGTTTAAAGCACTTGGGATCACATGGAGTTGGCAGGCAGGCTCCATCACTGTGGTGTAATGCCAATCCACATCAAAACATTTGGCTGAAAAAAGAGAAAGGTGGCCGACTTTTCTTTACAACAAGCATTAAACTGACACACAGAGAGTATTCTGAATAGGAATCTTGAGGCTGAGGGTACCCTAAATGTTAGGTAGGACTGAAGGCCTCAAATTGTTTAATAAAAGGCTATGATAATAGTGCATCATTATTCTATGTG

mRNA sequence

AGCTCCCAAAATGATGTGGGCACTCCCATCTATCAACTGGCGTAACTAACTATGATGGGTATTTATTTTTTTTCCGACTCTCACTGGATGTTTAGGGTTTATTTTGTTAACTCATGCACCAGGAGCTCGTTGATCTTCTGATGTTTCATTCCACGATGCACGCTTCAAATTCTTTTGCCTTACGAAGAGATCCATTTTTCAAGCCGCTGTCGCCCCCAATGCAGCTTCTTAACTCTGAAGAAACGGTCGATGACTCCTCAGAAAGCGGCCTTGAGGAGACACGGAATTTGAAGGCTTCTGAGTTGGCTTCGTTTGAGGATGACAATGGAAATGATGCGGATGATTTGGTTCTCGATGTCTCGGGGAGAAACTTGGCTTCCAATTTCTTGGAGGGTTCCAACAGCTCAGTGAAGGGTCTGGACGTATTTCGGAATGCGTTAAATTTGATCCCGAAATCAGTTGGCGACTTTAGCGAACTGAGAAGGCTTCAGTTCTTCGGAAACGAGATTAACTTGTTTCCGCCAGAGTTGAAGAACTTTGTCGGGTTGGAATGCTTACAGGTGAAGTTATCATCACCGGGTTTTGGTGGTTTATCATTACACAAACTGAAGGGCCTGAAGGAGCTCGAGCTATCGAAAATTCCTCCTAAACCTTCCTCGTTTTCAATTCTTAGTGACATTTAATAAATCTGAAGGAAATCTCCTCGTTTTGGTGGTTTGGTGTACCGTTTTCAATTCTTGGAGTATCTAGACCTCTCATTTAATAAGATGAAGAGCCTTCCAGCATAATAGGCTATTTGAATGCGTTGATATCCTTGAGAGTTGCTAATAACAATTTGGTGGAACCGCCTCCAGTACAATAAGTTTCTTAAAAGCTGTTAGATACCCTCTTGGATATGCTGCAAGTTTGAAGGAAATCATGAAGATGATACAGCTAATGAAGAATGGATTAGTTTTACAGTTGAAATGGATGTTTATGAAGCCAACATTCAAGACAATGGAGATAGCATTCCCCATAAAGGGGTGTTATGCCAAAATTGTGTGCACAATTATTGGATATGAACTTTTCATTTTGGTTCTTTGATTTTCATTGTTCAGGACTTTTTTCTTTTTTTTTTTGCAGGTCCTCGTAATCTCTCATCGAACCTATTAATGGGACCTTCAATGAATAGTAGATCTTTTGCATCTCGAAGATCAGGTACGGAGATGACATTATTTACAGCAGAAAGCTCGACAGGAACGCGTGAACAGAATCAGGAAGTGGAAAGGAGTAGATCATCATATTGTAGTTAAGATTCATGAAAATCACGAACTTGGGAGGCTTGATTCTGCCCCTGCTTCTGATTGTACAGTTGAAGATTCATCAGTTAATGATGAGTCATATGATAGTAAAGAAACCTGTCACAGAGCTGAAAGGGAAAATCTTATCAAGAGTCATGAGAATGACAATTTTGATACTAAAAAGAAATTTTCTGTGGAGGATTGCACATGTATCTGTGATGCTACTGCAGAAACAATGGCAAGGGACACAAATGAATATTGTGAGTCCTGTGGGGTTTTGCCGCCAACAGGCAAAGGATCATCTTTACAAATATCAAACGATAATGCTAAGTTGAAAAGATATTCTGAGAGGGAACTTGATAACCCTAAACCTTGCAAGTCAAGAAGGCCAGCTGAAGATAGCTCAAGGACGTGATTATCCCTTCATGCCATTAAGGAATTATGAGCAAAATTTCCTTCTTGATTCACGCGAAGTCATTCTTGTCAACGGGGAACACGATGAAGTATTAGATTCTATAGCAATATCTGCCAAATTCCCATCGAGACATCAAAAGTGAAAATATTGTAATTGATTTTGACGAACAATCTGATGGAGTTCCCATCGTTAAGCTTTGTGATTTTGATAGAGCAGTGCCCCTTCGATCTTTATTGCACTCTTGTTGCATTGCTCATACTGGATCCTGATGTTTGTGTTGGAACACCTCGATGGATGGCTACTGAAGGTTTACGAGCAATGCATACACCGAGTGTTTATGGACTGGGTCCTGCCAGATTCACGGCACAACAAAACATTAGTGCAGCTGAAGAAGTATCTCTGCAGGAGTGGTGCCCTACAGCTGTGAGGTCTGAGGCAGCAGCAAGATCGCAAAGATCTCTGGCATATGTTGTCCAAGACATTTGGGTTCAGGGTGTTCTGCTAGCAAGCAGGATGCTGGGAATTGAAGTGGATATTTGGTCGTTTGGATGTCTGTTATTGGAACTGTTGACCTTGCGAATTCCATACTTGGGACTTACAGAATTGCAAATCTTCGATCAACTTCAGATGGGCAAACGACCAGAATTGATAGGTGAGCTTGAGGCATTGGCCCCAGAATAGTTAGGCTCACAGATTGATTTAGGATACAGTGGCCAAGTAATCAGATAGAATATCTAATTGTAATGTATTTAAAATCCACCATGGCTCAAGAGAAATTTAACTCCGTCCAATCTATTGATGGGAGCTTTCTCCAAACCTCCGAAAAAAGCATGAAAAAAAAAAAGCTCGATTAGTATGATCCCTCCATAACCTCAGGATGAAAGGGACGATCTCGTAGCTCTTGGTCTATGAAGATAATCATTAGGTGTTTTGTCTTATTAGACTCCAGAATGAAAGAGACGATCTCGTAGTTCTTGGTATGTGAATATATATTGTTAGGTGCTTTGCCTTATTAACCTTATTAGACAAGAAGGAAGAATCACAATATTGTGATGTTGATAGAACTTGAGGTTGCTTGAAATCTTCATTAGTTGTACCTCATCATTATCAATTATTTTGACCATGCTTTCTTCGACTGTCCTTGAAAAGGCGAGTTGCATTGACATGCTTTCTTCAACTGTCCATGAGAAGCGAGTTGCATTGACATTTTAGCTTTATGTAGGTTCCTTGAAGTCCATGCGGATATGTTCATATCATAACATTCATGTTCCCTCATTCAGTCCTCTTATCTCCCTTCATTTGGTAGGTCTCCAAGTGTTGTACAATTAAGTAGGAGTAGCCTGAGATTGTTTATTCAAATCATTACCTTCTCATCTCTCATAAGATGATGCTAGGACATAGTTGGGTTATGGATCGAGATGGATATGGATTAAATAACCCAACGAGTTCAAACAAACTTGAAACTTGATAAGCATTGGCATTGGCATTGGCATTGTTAAATTAGAGTTTAAAGCACTTGGGATCACATGGAGTTGGCAGGCAGGCTCCATCACTGTGGTGTAATGCCAATCCACATCAAAACATTTGGCTGAAAAAAGAGAAAGGTGGCCGACTTTTCTTTACAACAAGCATTAAACTGACACACAGAGAGTATTCTGAATAGGAATCTTGAGGCTGAGGGTACCCTAAATGTTAGGTAGGACTGAAGGCCTCAAATTGTTTAATAAAAGGCTATGATAATAGTGCATCATTATTCTATGTG

Coding sequence (CDS)

ATGGAGTTCCCATCGTTAAGCTTTGTGATTTTGATAGAGCAGTGCCCCTTCGATCTTTATTGCACTCTTGTTGCATTGCTCATACTGGATCCTGATGTTTGTGTTGGAACACCTCGATGGATGGCTACTGAAGGTTTACGAGCAATGCATACACCGAGTGTTTATGGACTGGGTCCTGCCAGATTCACGGCACAACAAAACATTAGTGCAGCTGAAGAAGTATCTCTGCAGGAGTGGTGCCCTACAGCTGTGAGGTCTGAGGCAGCAGCAAGATCGCAAAGATCTCTGGCATATGTTGTCCAAGACATTTGGGTTCAGGGTGTTCTGCTAGCAAGCAGGATGCTGGGAATTGAAGTGGATATTTGGTCGTTTGGATGTCTGTTATTGGAACTGTTGACCTTGCGAATTCCATACTTGGGACTTACAGAATTGCAAATCTTCGATCAACTTCAGATGGGCAAACGACCAGAATTGATAGGTGAGCTTGAGGCATTGGCCCCAGAATAG

Protein sequence

MEFPSLSFVILIEQCPFDLYCTLVALLILDPDVCVGTPRWMATEGLRAMHTPSVYGLGPARFTAQQNISAAEEVSLQEWCPTAVRSEAAARSQRSLAYVVQDIWVQGVLLASRMLGIEVDIWSFGCLLLELLTLRIPYLGLTELQIFDQLQMGKRPELIGELEALAPE
Homology
[Close]
BLAST of Cp4.1LG03g10580 vs. TrEMBL
Match: A0A0A0L8J4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G145740 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 8.0e-15
Identity = 42/48 (87.50%), Postives = 46/48 (95.83%), Query Frame = 1 

Query: 116  GIEVDIWSFGCLLLELLTLRIPYLGLTELQIFDQLQMGKRPELIGELE 164
            G+EVDIWSFGCLLLELLTL+IP+LGLTELQIFD LQMGKRPEL G+LE
Sbjct: 1012 GLEVDIWSFGCLLLELLTLQIPFLGLTELQIFDHLQMGKRPELAGDLE 1059

[Close]
BLAST of Cp4.1LG03g10580 vs. TrEMBL
Match: A0A067G4A1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001142mg PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.8e-12
Identity = 37/52 (71.15%), Postives = 46/52 (88.46%), Query Frame = 1 

Query: 114 MLGIEVDIWSFGCLLLELLTLRIPYLGLTELQIFDQLQMGKRPELIGELEAL 166
           + G+EVDIWS+GCLLLELLTL++PY+GL+EL+I D +QMGKRP L  ELEAL
Sbjct: 724 LYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEAL 775

[Close]
BLAST of Cp4.1LG03g10580 vs. TrEMBL
Match: A0A067G737_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001142mg PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.8e-12
Identity = 37/52 (71.15%), Postives = 46/52 (88.46%), Query Frame = 1 

Query: 114  MLGIEVDIWSFGCLLLELLTLRIPYLGLTELQIFDQLQMGKRPELIGELEAL 166
            + G+EVDIWS+GCLLLELLTL++PY+GL+EL+I D +QMGKRP L  ELEAL
Sbjct: 1025 LYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEAL 1076

[Close]
BLAST of Cp4.1LG03g10580 vs. TrEMBL
Match: V4S8Q4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004189mg PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.8e-12
Identity = 37/52 (71.15%), Postives = 46/52 (88.46%), Query Frame = 1 

Query: 114  MLGIEVDIWSFGCLLLELLTLRIPYLGLTELQIFDQLQMGKRPELIGELEAL 166
            + G+EVDIWS+GCLLLELLTL++PY+GL+EL+I D +QMGKRP L  ELEAL
Sbjct: 1021 LYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEAL 1072

[Close]
BLAST of Cp4.1LG03g10580 vs. TrEMBL
Match: A0A067G464_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001142mg PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.8e-12
Identity = 37/52 (71.15%), Postives = 46/52 (88.46%), Query Frame = 1 

Query: 114 MLGIEVDIWSFGCLLLELLTLRIPYLGLTELQIFDQLQMGKRPELIGELEAL 166
           + G+EVDIWS+GCLLLELLTL++PY+GL+EL+I D +QMGKRP L  ELEAL
Sbjct: 709 LYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEAL 760

[Close]
BLAST of Cp4.1LG03g10580 vs. TAIR10
Match: AT1G04210.1 (AT1G04210.1 Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 69.3 bits (168), Expect = 2.5e-12
Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 1 

Query: 116  GIEVDIWSFGCLLLELLTLRIPYLGLTELQIFDQLQMGKRPELIGELEALAPE 169
            G+EVDIWSFGCL+ ELLTL+ PY  L+ELQI + LQ GKRP+L  +LE L  E
Sbjct: 1001 GLEVDIWSFGCLIFELLTLQNPYFDLSELQIHESLQNGKRPKLPKKLETLISE 1053

[Close]
BLAST of Cp4.1LG03g10580 vs. NCBI nr
Match: gi|449433293|ref|XP_004134432.1| (PREDICTED: uncharacterized protein LOC101218031 [Cucumis sativus])

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-14
Identity = 42/48 (87.50%), Postives = 46/48 (95.83%), Query Frame = 1 

Query: 116  GIEVDIWSFGCLLLELLTLRIPYLGLTELQIFDQLQMGKRPELIGELE 164
            G+EVDIWSFGCLLLELLTL+IP+LGLTELQIFD LQMGKRPEL G+LE
Sbjct: 1012 GLEVDIWSFGCLLLELLTLQIPFLGLTELQIFDHLQMGKRPELAGDLE 1059

[Close]
BLAST of Cp4.1LG03g10580 vs. NCBI nr
Match: gi|659076309|ref|XP_008438610.1| (PREDICTED: uncharacterized protein LOC103483667 isoform X1 [Cucumis melo])

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-14
Identity = 42/48 (87.50%), Postives = 46/48 (95.83%), Query Frame = 1 

Query: 116  GIEVDIWSFGCLLLELLTLRIPYLGLTELQIFDQLQMGKRPELIGELE 164
            G+EVDIWSFGCLLLELLTL+IP+LGLTELQIFD LQMGKRPEL G+LE
Sbjct: 1012 GLEVDIWSFGCLLLELLTLQIPFLGLTELQIFDHLQMGKRPELAGDLE 1059

[Close]
BLAST of Cp4.1LG03g10580 vs. NCBI nr
Match: gi|659076311|ref|XP_008438611.1| (PREDICTED: uncharacterized protein LOC103483667 isoform X2 [Cucumis melo])

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-14
Identity = 42/48 (87.50%), Postives = 46/48 (95.83%), Query Frame = 1 

Query: 116  GIEVDIWSFGCLLLELLTLRIPYLGLTELQIFDQLQMGKRPELIGELE 164
            G+EVDIWSFGCLLLELLTL+IP+LGLTELQIFD LQMGKRPEL G+LE
Sbjct: 1012 GLEVDIWSFGCLLLELLTLQIPFLGLTELQIFDHLQMGKRPELAGDLE 1059

[Close]
BLAST of Cp4.1LG03g10580 vs. NCBI nr
Match: gi|470121035|ref|XP_004296590.1| (PREDICTED: uncharacterized protein LOC101301574 [Fragaria vesca subsp. vesca])

HSP 1 Score: 80.5 bits (197), Expect = 3.1e-12
Identity = 38/50 (76.00%), Postives = 45/50 (90.00%), Query Frame = 1 

Query: 116  GIEVDIWSFGCLLLELLTLRIPYLGLTELQIFDQLQMGKRPELIGELEAL 166
            G+EVDIWSFGCLLLE+LTLRIPYLGL+EL+I D + MGKRP+L  +LEAL
Sbjct: 1030 GLEVDIWSFGCLLLEMLTLRIPYLGLSELEIHDCISMGKRPKLTDDLEAL 1079

[Close]
BLAST of Cp4.1LG03g10580 vs. NCBI nr
Match: gi|641855653|gb|KDO74433.1| (hypothetical protein CISIN_1g001142mg [Citrus sinensis])

HSP 1 Score: 80.1 bits (196), Expect = 4.1e-12
Identity = 37/52 (71.15%), Postives = 46/52 (88.46%), Query Frame = 1 

Query: 114 MLGIEVDIWSFGCLLLELLTLRIPYLGLTELQIFDQLQMGKRPELIGELEAL 166
           + G+EVDIWS+GCLLLELLTL++PY+GL+EL+I D +QMGKRP L  ELEAL
Sbjct: 724 LYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEAL 775

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g10580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG03g10580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8J4_CUCSA8.0e-1587.50Uncharacterized protein OS=Cucumis sativus GN=Csa_3G145740 PE=4 SV=1[more]
A0A067G4A1_CITSI2.8e-1271.15Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001142mg PE=4 SV=1[more]
A0A067G737_CITSI2.8e-1271.15Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001142mg PE=4 SV=1[more]
V4S8Q4_9ROSI2.8e-1271.15Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004189mg PE=4 SV=1[more]
A0A067G464_CITSI2.8e-1271.15Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001142mg PE=4 SV=1[more]
BLAST of Cp4.1LG03g10580 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G04210.12.5e-1264.15 Leucine-rich repeat protein kinase family protein[more]
BLAST of Cp4.1LG03g10580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449433293|ref|XP_004134432.1|1.1e-1487.50PREDICTED: uncharacterized protein LOC101218031 [Cucumis sativus][more]
gi|659076309|ref|XP_008438610.1|1.1e-1487.50PREDICTED: uncharacterized protein LOC103483667 isoform X1 [Cucumis melo][more]
gi|659076311|ref|XP_008438611.1|1.1e-1487.50PREDICTED: uncharacterized protein LOC103483667 isoform X2 [Cucumis melo][more]
gi|470121035|ref|XP_004296590.1|3.1e-1276.00PREDICTED: uncharacterized protein LOC101301574 [Fragaria vesca subsp. vesca][more]
gi|641855653|gb|KDO74433.1|4.1e-1271.15hypothetical protein CISIN_1g001142mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom_sf
IPR001245Ser-Thr/Tyr_kinase_cat_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g10580.1Cp4.1LG03g10580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001245Serine-threonine/tyrosine-protein kinase catalytic domainPFAMPF07714Pkinase_Tyrcoord: 109..156
score: 1.
IPR011009Protein kinase-like domainunknownSSF56112Protein kinase-like (PK-like)coord: 114..161
score: 2.28E-10coord: 33..50
score: 2.28
NoneNo IPR availableGENE3DG3DSA:1.10.510.10coord: 33..47
score: 2.0E-11coord: 112..159
score: 2.0
NoneNo IPR availablePANTHERPTHR24359SERINE/THREONINE-PROTEIN KINASE SBK1coord: 113..166
score: 2.8E-20coord: 31..53
score: 2.8
NoneNo IPR availablePANTHERPTHR24359:SF20SUBFAMILY NOT NAMEDcoord: 31..53
score: 2.8E-20coord: 113..166
score: 2.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g10580CsaV3_3G012850Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g10580Bhi01G000546Wax gourdcpewgoB0783
Cp4.1LG03g10580Carg16608Silver-seed gourdcarcpeB0334
Cp4.1LG03g10580Carg06177Silver-seed gourdcarcpeB1331
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g10580Cp4.1LG08g03910Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g10580Wax gourdcpewgoB0764
Cp4.1LG03g10580Wax gourdcpewgoB0800
Cp4.1LG03g10580Cucurbita pepo (Zucchini)cpecpeB184
Cp4.1LG03g10580Cucurbita pepo (Zucchini)cpecpeB266
Cp4.1LG03g10580Cucurbita pepo (Zucchini)cpecpeB333
Cp4.1LG03g10580Cucurbita pepo (Zucchini)cpecpeB478
Cp4.1LG03g10580Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g10580Cucumber (Gy14) v1cgycpeB1025
Cp4.1LG03g10580Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g10580Cucurbita maxima (Rimu)cmacpeB402
Cp4.1LG03g10580Cucurbita maxima (Rimu)cmacpeB536
Cp4.1LG03g10580Cucurbita maxima (Rimu)cmacpeB640
Cp4.1LG03g10580Cucurbita maxima (Rimu)cmacpeB837
Cp4.1LG03g10580Cucurbita maxima (Rimu)cmacpeB928
Cp4.1LG03g10580Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g10580Cucurbita moschata (Rifu)cmocpeB364
Cp4.1LG03g10580Cucurbita moschata (Rifu)cmocpeB590
Cp4.1LG03g10580Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g10580Cucurbita moschata (Rifu)cmocpeB862
Cp4.1LG03g10580Wild cucumber (PI 183967)cpecpiB598
Cp4.1LG03g10580Wild cucumber (PI 183967)cpecpiB611
Cp4.1LG03g10580Cucumber (Chinese Long) v2cpecuB596
Cp4.1LG03g10580Cucumber (Chinese Long) v2cpecuB609
Cp4.1LG03g10580Bottle gourd (USVL1VR-Ls)cpelsiB484
Cp4.1LG03g10580Bottle gourd (USVL1VR-Ls)cpelsiB506
Cp4.1LG03g10580Bottle gourd (USVL1VR-Ls)cpelsiB510
Cp4.1LG03g10580Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g10580Watermelon (Charleston Gray)cpewcgB561
Cp4.1LG03g10580Watermelon (Charleston Gray)cpewcgB570
Cp4.1LG03g10580Watermelon (97103) v1cpewmB605
Cp4.1LG03g10580Watermelon (97103) v1cpewmB613
Cp4.1LG03g10580Watermelon (97103) v1cpewmB622
Cp4.1LG03g10580Silver-seed gourdcarcpeB0327
Cp4.1LG03g10580Melon (DHL92) v3.5.1cpemeB579
Cp4.1LG03g10580Melon (DHL92) v3.5.1cpemeB585
Cp4.1LG03g10580Cucumber (Gy14) v2cgybcpeB231
Cp4.1LG03g10580Cucumber (Gy14) v2cgybcpeB406
Cp4.1LG03g10580Melon (DHL92) v3.6.1cpemedB686
Cp4.1LG03g10580Melon (DHL92) v3.6.1cpemedB693
Cp4.1LG03g10580Silver-seed gourdcarcpeB0454
Cp4.1LG03g10580Silver-seed gourdcarcpeB1061
Cp4.1LG03g10580Silver-seed gourdcarcpeB1098
Cp4.1LG03g10580Cucumber (Chinese Long) v3cpecucB0745
Cp4.1LG03g10580Cucumber (Chinese Long) v3cpecucB0746