Cp4.1LG03g09470 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG03g09470
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Eukaryotic translation initiation factor 4E
Location	Cp4.1LG03 : 6972097 .. 6983856 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGATATTAATTTTATAATACCAAAGGGCAAAGGCGCTGTTGTTCCCTCTCCGGTTCTCCGTTAGTCGGCTTAATTTGCAGTCTCGCAGACGCACAAAGTTGGTGACGAAAGCAATTTAGGGCACACGTAGTCCGAAGAAGAAGCTGTTGTCCATGGAGTTGGTAACCGAGAAGAAGGATTTTGATTCTGCAAACGACAACAACAAGCTTAACTCTGCTCAAGCAGTTCTTGATTCTTCTTATCCTCCCTCAGTCGCTGCGGATGAAACTGGTAGTAATAACAATTCCAAAGAAGCTGAAGATTTGAGTGAACGCGTAGCTCGAGACCTCAAAGATGGCCTTCATCCCCTAAAGGTACTCTCTCCCTCTCTCTCGCTCGCACATACAAATATGCGCGTATAGTGTATGTGGATTTTGATCTGTTCGAAGAACTGGAATCGTACTCAGATGAATTTCTTCACTATTTTTTCGCTATTGATANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATTTTCCCGGTGGGGGACGGGTGTAGGCAAGACGTGTTGGGTGGATTGAAGGGTGCCTTTGATTACTTAAGTTTTGGTTATAATCAGGACGAGGAAATTAAAATTTCGTTGATTGAAGAAATGAAGAATATTCTTATGTCTGTTGCTTGTGTTCTACTTCATCGTGCTTCATTTTTAAGAGGGTTATCAATTTTCATTTTGATGAAAGGAACTTTTCACATGCGTCTGTGAAAATTGTACCAGAGTCGATCTCTTCATTACAACTTGATGCCTTTTGCGGAGTCTTGTTCATTTTAAGAGGATGGAGCACCTTGATGGTAGTAGTTAATTTCCCATGCGTGCATGTCTTATCATGACCACCTGGTAGCATGGACTCTGTCATTTGAGTCGAGTACCAGCGTCAAATTGAACACCCGTAATTGTGATTTTGAATGTCATTTATTTTATCATGGTCCAGACATTGGTTCCCTCAGCATGGCAAGTAACAAATCAGGATATCTCATCTATCAAGCCTTCGTAGTCTTTAGTTCCCAAGCATTGCAGCCTTTAAGTAATCCATTCAGTAGGTTCAGAGATTGTTTTGACCAAAGGTGCTACCCATTCGAAAAAAATGCTCTTCAATTTTTTATATTTATTTGGTTTCATGTATCGACAATTCTGATGGGGAGTCTGACAAACCTGAGTGGTGTGGAATCTGGTTTACAACCATTGTGCAATCATTTAGATGATGTTAGTAAGGAATCTTATGCTGAGGCATTAGGCTTAACTTTTCAAGAGGAGTATTCTTCTAAAATTGATGTGGATACTAATTTTAATCAAGAAGTTCTTCCTCCTCTGCTCCAGTACTTAGCAACTTCTCAACTCTCATATAAGCTTGAGGTCTTCAGACTCAAAAAAATTATCTGATGAAGTTAAATGGTTATCAAGTACAAACTAGTTGGTTTTTACCTATTTACATCTTCAATAAAGTTTATATCCTGAATCACCAAGGGTCATGGTTCTTCCAAAAGATTAGCATTAAAAAGTTTCTGAGGAAGTTTCTTCGAAGGAGATAGGCTTCTCAAAGCAAGGTCAAATGATGGCTACTACAAAAGAAAAGGTAGCAGGGGTTAATTAATTTCAAAAGTTGGCTGGCGTCAATTGTGAGCTAAGTAGGAGTTGTTAGCTCTTAGTTGAATCGTCGTTTATAAGCTTAAGCAGGAGTTGTTAGCTTTTAGTTGATTAGATAATTTGTTGGTTTATGGGTTTGAATTTGGAAGAATTTTTATCTCCTCATCAAAAGATGCTCCTACTAGCTCCTTGCATCATGGCATTTTGGGGTCATTTTCCCATGCGATGTTTTTGGAAGTAGATTGATTTTTTCAGTACATTGAAACGGGTTGTTAGTTTTTGGAGTGAGAGGTTTTAAGAAATGAGTCAATATTCTTTTTGCTCGTACTCTTCAACATTTGCATTCAAAACAGGAAGATGGTTTCATTGCTGAATTTTGTGGAGAGTTTGGTTATCTTAATTCTTAAATTTTCTTTGGCTTGATCGTTTATTATTATTATTATTTTTTTTGGTTCTATGTTTAATTTGGTTTTTATTTTTGTTGTAACTTTGGTTCTTCTTTCATTTCCTTGTGGAGTATGTATCGTTTGAGCATTAGTCTCTTCTCATTTTATCATTGAAAATTTTTGGTCCAAAAAAAAAAAAAGTAAATTCTACTTTGAAGTGACCATTCTTTTGAGAAAGAATTTCCTTCAAAGTTAGTTACTTGTTTTGTTTCACATTTTGAGATATGAGATTAAGAGCTTGTTGTATCTACAATACATAATTTTAAGAGTTGATTGATTCTTGGTCATGGAAACTTGAAGCTTTTGTGTAGGTAACATTTTTTACATTATTTGGTCTGTAGATGAAGTTTCCTTTATTGAAGAAATGAAGCATAATCTGAGAATTTCTCTTTCATTCTACCTTTTACGTTGGTTTGTAAGTTATTTGGTAGATCATTTCAGTGACCTGTGCATTCCAAATTCTTAAAACAAGTTAGAGATGAATTTGGTACTGCGCGTCTAGAAAAGCAAAAGTCCTCTCCCGTATGGTTTATTGAGTGTGTTGTTTGGCCACCTTCAGGTGGAAGGAAGTTGTTTCATGTAAAAGTTTGTCTATTCCAAAAAGGATGGCTGATTATCTGGGAAATGTTAAAAGATTTCCTAGGGAAGTTTTTATTCGTCTAATGCTCTTTTCTGGCTGTGTCCGAGGAAAAACCAAGTAATAGCCGTTATGTATAGGTTGTGAAGAAGAAGATGGATATACATTCTTCACGGCTTACCTCAGANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGTTTGAAAAGCTAAATATAGGATAAATATGAATTCTGTGATTTGCTGGTGGTCTCCAGACTGTTTGCTCACAATTATTGGAAAACGATCAAAGATGCTTCGGAAGAGTATTTCCAAGTCAAGTCCTGGTTCAATCCATTCCTGCCTGATAAGGATTTATTGAAGTTGGATGATAGTATTGACAAGTCGATGGAAAATGAAGATTAGTTAGTGGTTCCATTTAAAACTCAAAAATTGGTCGAGAAAAAAACACTCATTTAGAATTTTTCAAAGGATATGGAGGTTGGATCTCTATAAAATATTTGTCTTTGACATATTGGGAGCTCAACACGTTTCAAGCAATTAGTGAATGTTTTGGTGGCCTTCGTAGTACTTCTTCTAGAACACTTAATATGCCTGATTGTTTTGAAACTTTTATTGAAGTCAAAAGGAACCTTTGCAATTTTCTTCCAACAACCATTGAGATAATGGATAAGAAGAGTGGAAATACTTTTCTTAAATTTGGTGCACGACTTCACTAAATCCTCCATACTCCACCAAAGTTGATTTTTCTGTAAATGACTGTTCAAATTCTATAGATTTAAATAGACTTAGACAGGTACAGGAAGATGTAGTTATTTCGCACCGCAAGCTACAAATTTCTATTTTTCCAGTAGTTAATGCATTAAATGATCATAGCATGCACGGTCAGTCTCATCTGTCGGCCTCCCTTGATACTTTAAATGAATTTAATGCTGCCAGCATTGTGGTTTTAAAGGATTCAACTGGTTCTCTCTCATATCTCAATATACATTTATTTGTTGATGGGTATTATTCCAAAGGTTTAGATCCATAACATTCCTCAAATCATACTCCTTTCATCCCTCCTGAATTGTCAACATTAAATACTATGCTGGTTGAAAATTGAGCAATGGAAGAATCAGATTTAAATGTTACAAATTTTGTTTCAGAACTGATTAATATGAGCCAGACCAATAGTTCCTCTTTCTCTCTTGATGAAGCTTGAGCATTGAATGATACGATTTTAGTTGAGACTTGATTGATGTGGAGACAGTGACTAATTCCTCTTCCATAACAACAAACCTCAGAATTCATCATCAGCTATTCCCTACGCCTATTGAGGTTTAAATTCCTCAAAATATTCGACAAGTGCAAAGACGAATTAATGAAGTCTCTCCATTTCACTACACTCAGACGAAAGAGTCAGCTCCTCTTACTTTCCCTATTCTATAAAATTCGGCATTTAATGAAAGATGTTCTGAGGGAATCATGTTCTCGACTTCTAATAACAATGTCAAGTCAAGTCTATTCTTCAGAAAATGTGAATCAAATATCCTCCAAAACGAGCTCCCAACATCACTCGCAATAAGATTTCTCCCTTCCTGGTTCAAATGTTGTTTTAATTAAAGGTGTTTTTCCTCTTCCAATTGTGCAGTCATGTGCGTTCATCACCTTTGATTGATTCAAATGGGGAATTTGATGTTAGTTTATGTAGTGTGAGGACTATCTCTCAACTCTTGGAATCTCAGAATGTTGGGGCTAATAATGATTGTTTTTTTTTTGGAGGACTCTTATGCAAAGACTTTTGGTCTTCTTTTTCCTGATAATGAGAATGAGCCTCCAGTAACATATTCACCTGCTTGTGAAGCTCTTCTATCCAGTACTTTTCCTTCACCAGCCATCCCGAGTAAATTCTCTTCTTTCATTCATATCTGTAGTCTTTGAATTCGTAGTATCCCTCCAGTGTCTCCAATTGTTTTTTTAACATTTATTTGAGTTAATTATTGTGGTGCCAACAATGAAAGTTATCATGGAATACTAGAGGCTTTAGGGATCATTCTAGCTTTGAAGAAATTTATTCAGCTTCATTGCCCAGATTAAGTATTAATTCAGGAGACCAACATTGCAGTTTTTGGCTGAAAATTGATCAAATTCTTTGATTGATAGGCTTTCTGGTTCAAAAGAATGGGATCAATTGTTTGACCATTCAACGGCATTGAGATGAACTCGTATTTTTTCTTGCCACTTTCCTATGGAAGCAAGATTTGTTTGGGAGCCTTCCTTTTTTGGATTTTGTAACTGTCGGTTGTAAATGTCAGATTGTGAGTTTACTTCAGCAATTATCCTTTGTGGTTCAATGGAAATTCTATCCTAGAACACATGGGGGTTGGGAGATTATCCGAAAATACTCTGTTTGAAGTAGTTTTTGCAGCATTGTTGTCCTGACTGGGCTTTTCCACAAGAGTTAAATGTTGATATTTTTAATTCAAAGCTCATTAAATTCATGTGGAGTTCCAAATTAGCATTTTATGTTCCGGTGTTTAATGCTTTGGTTGGACAAAAGGTGGTCAATATAACATTTAATTCAGTGTTCTCCAAAGGAGCTTTGGATGCTCCGGTTTATAATATCTTTGGTTAGTTATAGGCTGAAGTCAAATTTCAATTTAAGCGGCCTTCTAGTCAGGAAGGTATACAGCTTATTTGCATGAAAAGCTTTTAAAAGATGTCTCTCTGGATGAGCTAGTGGCTGAAAAGCTTGTAATAATATATGAAGCATTTATAGTTTTATTATTACCTGGGCTTACCTCTATTTTATTGTAATTGCCTCCAGGTTGTTTTCTTTTTCTTTCTATCTCTTAACTCGCTTTGGGAGTTTGTATCCCTTGAACATTTCCTTTTCATTATATCAAGTTGTTTCTTGTTAAAAAAAAAGTTCTAAGAAATAAGCAAACAAACAACTGAAACAAAAAACTGTGTTCATCTCTTGAACCATTTTTACTTGCACAAATTACCTTCCTCGATTTGTGGGATGAGAAAACACAATGGAACCTCAATCAGTTCCAGCTCTTCAATAACTTTGTTGAAATTTATTAGAAGTCGAGAACATGATTCCTCAATCAGTCCGAGCTTTTCAATTATTATATGAATGACATATGTTGTTATTGGCAAATTTTCTTGTATTCTCTAATTTGGAGTCTGGAGTATCTAACTTTTAAATGATTGACGGGAAGTTATTTTATTTATTTATTTATTTTTCTTTTGAAAAAAGTTATCGAAAATGAAACATTCCTTGAGGGGAAAAAGAAAGAGAATTGGTAAAGTTCACTAATCAAACCCAATGAAGTAACGTGAGAAGACATGGAAAAATGATGTTTGAGAAGAAAGTTATATTGCTTGAAAGACTTATTGAGTATCTGTCCGAATCTTTTGTTCATTTTATTATTGATAAACATTGTCTTTATTGAGATATAATTTTCCTTCTAATATTTAAATGAGCTTAAAAGTGAATATTACAATGATAATACAAACGTGTTGATCTAAATTATTTATATTGTATAATTCACCAGTTGAAAATATTGAAATGTGTATAGTATTTAATGATAATTTTCAAAATATTATTTATTGGATGTGTCACTCTCATAGCATTTTTGTATAATGATGTTGTCTAAAGCATATGGAACACTTAGCCTCAGAGGCTCATTGGAATCTATGTGGTAAACTCCTCTAACATAATGAAGGCATGACGAGTATTAGTAGGATACAAATTAAATATGTGAGGGTTTTAAGGACTCAAAACAAGGTTTTGTTGGCTAAATGCCTTTTATGTTTCCCCTTTGAGTCTATACCTTTGGGTATAAGAATGAGCAAATACGGTCCTCACCCTTTTGTATGGATATCAGGTGGGGCTAAAGGCACTTCTAGAAATCCTTGGAAATATATTTTTAGTGAACTCCCTTTCTTTTCATGGGTTTTTTAGTGTCTCACCAAGTAATTGGAGTTTCTTTTTTTAAGGATAATTAGTTGGGGATAGACCCCTCTTCTCTATGTTCCCCATTTATGTCATTTGTTCTCTATGAAAAGTTGTTCAATGACAAACGTCCTTTCTCATACGAGATCTCCCATTCTCTATTGTGGGAGTTCCATAGCTCGTTGTTTGAGATAGAAACAATAGATATATAGCTTTCTTATCTTTGATCGAGGAGTTTGTGATTAGGCATGGGAGAAGGGATATTCAGCTTTGGAGCCCAAATCTTTTTTAAGGTTTTACTTGTAGTTCTCTCTTTTGTGGTCTAGTGAATCTATTTCCTTCTATTGTGTTTGTTTGTCTGTATCTCTTTGTGGAAGGCGAAGTTAATTTTTTTTCTTTTTCTGAAAGGTCATCCACCGAAAAGTGAATACCTTTGATAAGCTATTGAGAAAGATGCCTAGTTTGGTAGGGTCGTTTTGATGCATTATTTGTAGAAGTGCGACAACGTACCTTGATTGTTTGTTACGGAGAGATGATCGAGAGTAAAGCAAGTTGGTGTGTGTGTGCAGTTTTGTGGAGCCTTTGGGAGGAAAGGAAGAATAGGACCTTTAGAAGGGTTGATAGGAGCTTGAGTGTCGTTTGGTCCTTCAGAAGGTTCTATGTTTTTTTTTGGGCTTCTGTGACGAAGGTTTTCTGTTAGGTCTTATTTAACTTAATTGGAGTCCCGTTCTTTAGTTTGGCTCCCTTTTTGTGGGGCTTAGTTTTTGTGTGCCATTTTATTCTTTCATTTTTTTCTCAATGAGAGTTTGGTTCATATATACATATAATCCTTTCATCTTGTAATATTATCAAACAGAACAAGTTCGTTATAAAGCCTGAAGCATGCAAATCAAACATATTTTTCCTAGTTCTTGTCTATAAGTAGACAGAACCTTCAAAATCAAATTACACAGATATTGATAGATATTGATAGGAATGCTATTAGGTTAGAAGTGGGAATCTTTTTAGGCTAGTGAGGATATATTAGTAATTAGGTAAGGACTTTTTTTGGAAGATCTGTTTTAAATAGTGTGAGTGAGAAGAGGTTAGATAGGCAATTGTTTAGTGGCTGTGGACTTGAGTAAGAATACTTAAGAAAGAGGGTCCAAGTACCTCGAATTTATTGGGAGTTGATTGTATTCCTTTATCTCATCTTTCAATACTATTTAAGCTATTTGGGTTCTATCATATTGTTATTCTAATAAAGGAGACAGTGTTCCAAAACTAATAACTAATATTAATCAAAGGTTCTCTAAATCCTACCCGGAGGAAGGAGAAAACAAAAATCAAGAGTGAGCACTAGGAACACAAGGAATTGAACAAAAGTAATTGATTATCCAAGGAATTGCAACAATACATGTAGGGGGCAGAAAATTGAAGGGGATAAGAGAAGACTGAACTGAGGGGGAAGGACATAGCAAGACGGGATGAGAGTAAGTGATGAAAAAAGAATAAATGATAGCTAGGAGTATGTAGAAATTGTGGAAAAAGCTACAAGACGAGATTCTTTCAAGTTAGTTAAAATTGCAAATATATTTGGGGGCAGAGAGACTAAAGATTATTGAGTTTCAAAGTTGGCAGACCAAACGTGCATCAAAGATCTTCTATTGCACTCCAACCAACTTATTACCAAGACATCGCAAGCAGTGGGGCTTAATGTATCTTAATCTGTAGTTGGCAGCATCAGATGTACTAGATTTATCGACTTGGCTCATTTTTGTAGTTGTAATATTGACCAACGGCCAATGCTTTACCTTGATCATCCCCTTCATAGAAATTGAAAAAGTAACATCTAGATGCCTATGGTTTTTTCCAATAAAATCCAAGGAAAACTATAAGGCTAGAAGTGAAACATTCTTTCTTAAGGTGGTAAATTTACCTTGGAAATACAATATTGATTCTAAAGGTGACAGATTAACCTTGTTGAGAGCATCTCTCTCTTTCTCTCACTTTCCAACTTATTACCTTTCCACCTTCTGAACGCATAATAAAGTTGCTACCACAATCGAAAATGTCATGAAAGATCTCCATTGGGATGGACACTCTGTTGAGAAGTTTATTTGGTTGGTTAGTACAAGGTTAACTTGGTTGAGGAAATTGGCGAGGAACTTTCTCCTCACCAAAAGGCTATTGAGATTTGCCTTCAAGAAACATGCTTTTTGGAGGAAATTTGCACCTATATATTATATCCAAAGTATATTGGTGGTCAGTCTTGCTGGCTACCAAATCTTCCAAAGGTCCTTAGAAAGATGTTATCAAGCTGAAAGGCCTTCTGTTCTCGAGGGGTGGAGTTGACAATGGCATAACACAAAATTCAGGGAGGACCTCCAAAACAGACCATTTCAAATTTACAATTCCACGAACTCTTGAAAGTTTAAATTCAGAAAAAAATCTGAATAATATGGAAACTCGCAAATGGAAGTTGTATGCTGATATCCCTGCTAATTTCATTTTCAACCCAATAGAAGAGAATGGAGTCTGACTTGTGATTTCTTGGGATCTTTTAGTTACAAGTCTTTCCTTAAAGATATTTCAAAGGATGCTCAACTTCTTTACCCCAAGCTATCCTATTAAAGTTTAAACCTTCATTTGGGAGTTTCCTAGATTTTGGGTTTCCACTGTTTTCGACCTACTCGCAGTTTCTCAAACCTGTATTGTAATTTTATTATTTCTTTAGTTAGCACCTATTGGAGTGCTTTCTGATTAGCTTCTTTTCATCGTAGGCATGGAAAAAATTCTCTCATGGTTTATTAAGGTCTGTAGTGAGTGTTAGGCATTTTTGTTTGTTTTCTGTACACTGATGATAGGAGACTGACCTGTTCATACCCTATTGAGCCATATTGGTGTTCTCGTTTCTTTACATTTCTGAGATGAACTCAACTTTGGTTTGTATGCTTCAGATTTCCCTTGTGTTTTTTCTCCATTCTTTTGTGTGTTTTGGTTGTTTTAGACCTTTTCACGTCACTTTCACATTACCACCTTTTCTTTTATGTGGCTAGTGGCTTATAGAAAGGTCCATGTATTTTTTTTTTTTTCTTGTGTGCAACTGACCCGTTTTGGATTTTTCCTGCATCTAGCACAAGTTTGCATTTTGGTACACTCGTCGAACACCTGGAGTTCGGACTCAAACATCATATGAGGACAACATAAAAAAGATTGTGGACTTTAGCTCGGTACGACTTGTCAACATTGATTTTCTGAAACACTATCTTGTACTGTGGTTATTTTATGTCGGTCTTTACAATTATTTGTTTTTCTATTGATTGAACTTTGTTTTTCTATTGGTTAAACTTTGTTTTCCTCATGCATGTAGGTTGAAGGTTTTTGGGTAAGCTATTGCCATTTGGCTCGTCCTTCTTCATTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATCCGTCCACTCTGGGAGGTAATATGTTGAGGAATGTTGCATTCATGTGTTCCCCTATGCTTACTAGGGAGTGAACTTCCTGTTCCTTTTTGTAACATAAGATATTGGATGGTTTTGTATTTCTTTGCTCAATGGGGAGTCTAATTCCTGTTTGTATGCAAATGCAATAATCTTTCAGGATTCTGCCAACTGCAATGGTGGAAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGTCGATTTTGGGAAGATTTGGTAAGTGATAACAAAGATGACATTGTTATTGATCAATATGCATTACTTGTCAAATCTTAAGATATTTATTGTTCCCTTTGGTTTCTTAATTTCTGATTAACTGTTCTCAACTTGATTGTTGAAATCTAAAGTTGCCTGAAAATACTTTTGGATAATTATTCGATATATTCATTTTCTTAGATAATAATAATAATAAAGGTAGTAGTTGATTCCTGCTCCTGCTCCCGCACCACCCCCGGAAAAAAGACAACACCCCTAAAGCCATAAAAGAAGTATCAGTTCTAGTGGGGTGGTCGTACTATTCAGTCTGCAGTGGGGTTCATGCATATTGGTGGTAGAATTTACGTTCCCTTTTTAGCTGTAAAAGTTCTGTGTATTGTGTCTTTCGTTTGCTGATCCGTTGTAATTCCGCTGAATATTCAGTCATTTAGGTTTCTACATCTCAGGGCTGTAATTTTTTTACCTTGTTATCTGTATCGAAGGCTATCTCTTTGGCTTGAGAAGTGAGAAGATTCTTTATCATGCCTTTGATTGTTCCATTGTGTTTGCTTTTATTTGAGTTAGACATGCATTTGGTTGTGAATTTAATACGAGTTTTCAGGTACGCTAATTCCATGGATGAATGAAAGCTTCTGTTGTATGCTTCTGCAGGTTCTCGCATTAGTGGGGGACCAGCTTGATTTCGGTGATAACATATGTGGTGCCGTGCTTAGCATTCGTTTCAATGAGGATATTTTGAGTGTCTGGAACCGCAATGCATCTGATCATCAGGTCTGTAACATGATCTTTTACTTCTACCCCATCACCCATAAGTGCAATACAAGATCATGAGTTTTAACTTATTTGTATGTCCTTGTACCTACCAGGCAGTGATGGGTCTGCGAGATTCGATCAAACGACACTTAAAGCTCCCACATGGGTATGTTATGGAATACAAACCCCACGATGCATCTCTGCGTGATAACTCGTCATACAGAAACACATGGTTGCGAGGGTGAGGACGGTTGTACCTCGTCAGCTGCTATGGCTATGACCATTAAGACACAAGGCTGAATGATGTTTGCATGGTCTGCCCCTGGCCCTTATTGCTTTTGTCCCTTGTTTGGATGATAAGCAATTGATTGATTCACCTGACACTTTTATTGAGGACATTGAAGCTTTTCTTTATTGTTTGTTCAAAAAAGGAGAATAGGCTCTACTACTATGTAATGTAAATATGTGGACAATTTGTAACTGTAGACTTCTCTGAACAGGAAACCTTGGAAAAACACCTACACAAGACAACTTCTGTTTACTTGTTATAACTTAACATTGTTTTGTTCATTTTGTTAGGACAAAACTTGGCTCCACACTTTGATTTTAACTCCTTAAGAATCATTTTCTGGCAGCAGGTGTAGGTGTTTTGAGCCTCATAGGTTTACAGGTTGAG

mRNA sequence

ATTTGATATTAATTTTATAATACCAAAGGGCAAAGGCGCTGTTGTTCCCTCTCCGGTTCTCCGTTAGTCGGCTTAATTTGCAGTCTCGCAGACGCACAAAGTTGGTGACGAAAGCAATTTAGGGCACACGTAGTCCGAAGAAGAAGCTGTTGTCCATGGAGTTGGTAACCGAGAAGAAGGATTTTGATTCTGCAAACGACAACAACAAGCTTAACTCTGCTCAAGCAGTTCTTGATTCTTCTTATCCTCCCTCAGTCGCTGCGGATGAAACTGGTAGTAATAACAATTCCAAAGAAGCTGAAGATTTGAGTGAACGCGTAGCTCGAGACCTCAAAGATGGCCTTCATCCCCTAAAGGTTGAAGGTTTTTGGGTAAGCTATTGCCATTTGGCTCGTCCTTCTTCATTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATCCGTCCACTCTGGGAGGATTCTGCCAACTGCAATGGTGGAAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGTCGATTTTGGGAAGATTTGGTTCTCGCATTAGTGGGGGACCAGCTTGATTTCGGTGATAACATATGTGGTGCCGTGCTTAGCATTCGTTTCAATGAGGATATTTTGAGTGTCTGGAACCGCAATGCATCTGATCATCAGGCAGTGATGGGTCTGCGAGATTCGATCAAACGACACTTAAAGCTCCCACATGGGTATGTTATGGAATACAAACCCCACGATGCATCTCTGCGTGATAACTCGTCATACAGAAACACATGGTTGCGAGGGTGAGGACGGTTGTACCTCGTCAGCTGCTATGGCTATGACCATTAAGACACAAGGCTGAATGATGTTTGCATGGTCTGCCCCTGGCCCTTATTGCTTTTGTCCCTTGTTTGGATGATAAGCAATTGATTGATTCACCTGACACTTTTATTGAGGACATTGAAGCTTTTCTTTATTGTTTGTTCAAAAAAGGAGAATAGGCTCTACTACTATGTAATGTAAATATGTGGACAATTTGTAACTGTAGACTTCTCTGAACAGGAAACCTTGGAAAAACACCTACACAAGACAACTTCTGTTTACTTGTTATAACTTAACATTGTTTTGTTCATTTTGTTAGGACAAAACTTGGCTCCACACTTTGATTTTAACTCCTTAAGAATCATTTTCTGGCAGCAGGTGTAGGTGTTTTGAGCCTCATAGGTTTACAGGTTGAG

Coding sequence (CDS)

ATGGAGTTGGTAACCGAGAAGAAGGATTTTGATTCTGCAAACGACAACAACAAGCTTAACTCTGCTCAAGCAGTTCTTGATTCTTCTTATCCTCCCTCAGTCGCTGCGGATGAAACTGGTAGTAATAACAATTCCAAAGAAGCTGAAGATTTGAGTGAACGCGTAGCTCGAGACCTCAAAGATGGCCTTCATCCCCTAAAGGTTGAAGGTTTTTGGGTAAGCTATTGCCATTTGGCTCGTCCTTCTTCATTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATCCGTCCACTCTGGGAGGATTCTGCCAACTGCAATGGTGGAAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGTCGATTTTGGGAAGATTTGGTTCTCGCATTAGTGGGGGACCAGCTTGATTTCGGTGATAACATATGTGGTGCCGTGCTTAGCATTCGTTTCAATGAGGATATTTTGAGTGTCTGGAACCGCAATGCATCTGATCATCAGGCAGTGATGGGTCTGCGAGATTCGATCAAACGACACTTAAAGCTCCCACATGGGTATGTTATGGAATACAAACCCCACGATGCATCTCTGCGTGATAACTCGTCATACAGAAACACATGGTTGCGAGGGTGA

Protein sequence

MELVTEKKDFDSANDNNKLNSAQAVLDSSYPPSVAADETGSNNNSKEAEDLSERVARDLKDGLHPLKVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG

Homology

[Close]

BLAST of Cp4.1LG03g09470 vs. Swiss-Prot
Match: IF4E5_ARATH (Eukaryotic translation initiation factor NCBP OS=Arabidopsis thaliana GN=NCBP PE=2 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.0e-76
Identity = 129/144 (89.58%), Postives = 133/144 (92.36%), Query Frame = 1


Query: 68  VEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED 127
           VEGFW  YCHLAR S LPSPTDLH FK+GIRPLWED ANCNGGKWIIRF KVVS RFWED
Sbjct: 78  VEGFWACYCHLARSSLLPSPTDLHFFKDGIRPLWEDGANCNGGKWIIRFSKVVSARFWED 137

Query: 128 LVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGY 187
           L+LALVGDQLD  DNICGAVLS+RFNEDI+SVWNRNASDHQAVMGLRDSIKRHLKLPH Y
Sbjct: 138 LLLALVGDQLDDADNICGAVLSVRFNEDIISVWNRNASDHQAVMGLRDSIKRHLKLPHAY 197

Query: 188 VMEYKPHDASLRDNSSYRNTWLRG 212
           VMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 198 VMEYKPHDASLRDNSSYRNTWLRG 221

[Close]

BLAST of Cp4.1LG03g09470 vs. Swiss-Prot
Match: IF4E3_WHEAT (Eukaryotic translation initiation factor NCBP OS=Triticum aestivum GN=NCBP PE=2 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.1e-75
Identity = 128/144 (88.89%), Postives = 133/144 (92.36%), Query Frame = 1


Query: 68  VEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED 127
           VE FWV YCHLARPSSLPSPTDLHLFKEG+RPLWED AN NGGKWIIRFKK VSGRFWED
Sbjct: 89  VESFWVCYCHLARPSSLPSPTDLHLFKEGVRPLWEDPANRNGGKWIIRFKKAVSGRFWED 148

Query: 128 LVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGY 187
           LVL LVGDQLD+ D++CG VLS RFNEDILSVWNRNASDHQAVM LRDSIKRHLKLPH Y
Sbjct: 149 LVLVLVGDQLDYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTY 208

Query: 188 VMEYKPHDASLRDNSSYRNTWLRG 212
           +MEYKPHDASLRDNSSYRNTWLRG
Sbjct: 209 LMEYKPHDASLRDNSSYRNTWLRG 232

[Close]

BLAST of Cp4.1LG03g09470 vs. Swiss-Prot
Match: IF4E3_ORYSJ (Eukaryotic translation initiation factor NCBP OS=Oryza sativa subsp. japonica GN=NCBP PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 7.2e-75
Identity = 126/144 (87.50%), Postives = 132/144 (91.67%), Query Frame = 1


Query: 68  VEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED 127
           VE FWV YCHL RP SLPSPTDLHLFKEGIRPLWED AN +GGKWIIRFKK VSGRFWED
Sbjct: 84  VESFWVCYCHLTRPVSLPSPTDLHLFKEGIRPLWEDPANRSGGKWIIRFKKTVSGRFWED 143

Query: 128 LVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGY 187
           LVL LVGDQLD+ D++CG VLS+RFNEDILSVWNRNASDHQAVM LRDSIKRHLKLPH Y
Sbjct: 144 LVLVLVGDQLDYSDDVCGVVLSVRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHSY 203

Query: 188 VMEYKPHDASLRDNSSYRNTWLRG 212
           +MEYKPHDASLRDNSSYRNTWLRG
Sbjct: 204 LMEYKPHDASLRDNSSYRNTWLRG 227

[Close]

BLAST of Cp4.1LG03g09470 vs. Swiss-Prot
Match: IF4E4_CAEEL (Eukaryotic translation initiation factor 4E-4 OS=Caenorhabditis elegans GN=ife-4 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.8e-41
Identity = 73/140 (52.14%), Postives = 97/140 (69.29%), Query Frame = 1


Query: 68  VEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED 127
           VE FW    H  RP+ +    D+H FK G++P+WED ANC GGKWIIR KK +S R WE+
Sbjct: 67  VEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLSTRIWEN 126

Query: 128 LVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGY 187
           L++A++G+Q   GD +CGAV SIR  EDI+S+WNRNA D      +R++++  L+LP   
Sbjct: 127 LLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQLPQNT 186

Query: 188 VMEYKPHDASLRDNSSYRNT 208
           V+EYK HD  LRD SSYR+T
Sbjct: 187 VLEYKRHDDCLRDQSSYRHT 206

[Close]

BLAST of Cp4.1LG03g09470 vs. Swiss-Prot
Match: IF4E2_MOUSE (Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus GN=Eif4e2 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.8e-41
Identity = 70/132 (53.03%), Postives = 95/132 (71.97%), Query Frame = 1


Query: 68  VEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED 127
           VE FW  Y H+ RP  L   +D HLFKEGI+P+WED AN NGGKWIIR +K ++ R WE+
Sbjct: 91  VEQFWKFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWEN 150

Query: 128 LVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGY 187
           L+LA++G+Q   G+ ICGAV+S+RF EDI+S+WN+ ASD      +RD+++R L LP   
Sbjct: 151 LILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNT 210

Query: 188 VMEYKPHDASLR 200
           +MEYK H  S++
Sbjct: 211 IMEYKTHTDSIK 222

[Close]

BLAST of Cp4.1LG03g09470 vs. TrEMBL
Match: I1JD62_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G072700 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.8e-88
Identity = 168/218 (77.06%), Postives = 179/218 (82.11%), Query Frame = 1


Query: 1   MELVTEKKDFDSANDNNKLNSAQAVLDSSYPPSVAADETGSNNNSKEAEDLSERVARDLK 60
           M+   EKK+    ++NN  N+    LDSS   + A D     +N+KE E   ER AR+LK
Sbjct: 1   MDFTVEKKE----SENNAENAHPTTLDSSSQLASALD-----SNNKEIE---ERQARELK 60

Query: 61  DGLHPLK-------VEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWI 120
            GLHPLK       VEGFWV YCHLARP+SLPSPTDLHLFKEGIRPLWEDSANCNGGKWI
Sbjct: 61  AGLHPLKKIVEFSTVEGFWVCYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWI 120

Query: 121 IRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGL 180
           IRFKKVVSGRFWEDLVLALVGDQLD+GDNICGAVLSIRFNEDILSVWNRNASDHQAVM L
Sbjct: 121 IRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMAL 180

Query: 181 RDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 212
           RDSIKRHLKLPH YVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 181 RDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG 206

[Close]

BLAST of Cp4.1LG03g09470 vs. TrEMBL
Match: M5WA91_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010907mg PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 6.1e-81
Identity = 156/243 (64.20%), Postives = 176/243 (72.43%), Query Frame = 1


Query: 1   MELVTEKKDFDSANDNNKLNSAQAVLDSSYPPSVAADETGSNNNSKEAEDLSERVARDLK 60
           MELV EK+     N+NN   +     ++SY  ++         +S E+++  ER ARDLK
Sbjct: 1   MELVAEKESDQQNNNNNSEKNN----NTSYAQALV--------DSHESDEFRERQARDLK 60

Query: 61  DGLHPLK--------------------------------VEGFWVSYCHLARPSSLPSPT 120
            GLHPLK                                VE FWV YCHLARP++LPSPT
Sbjct: 61  AGLHPLKHKFVFWYTRRTLGMRSQTPYEDNIKKIVDFTTVEAFWVCYCHLARPATLPSPT 120

Query: 121 DLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVL 180
           DLHLFK+GIRPLWEDSANC+GGKWIIRFKK VSGRFWEDLVLALVGDQLD+G+NICGAVL
Sbjct: 121 DLHLFKDGIRPLWEDSANCHGGKWIIRFKKAVSGRFWEDLVLALVGDQLDYGENICGAVL 180

Query: 181 SIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTW 212
           SIRFNEDILSVWNRNASDHQAVM LRD+IKR+LKLPH Y+MEYKPHDASLRDNSSYRNTW
Sbjct: 181 SIRFNEDILSVWNRNASDHQAVMALRDAIKRNLKLPHSYLMEYKPHDASLRDNSSYRNTW 231

[Close]

BLAST of Cp4.1LG03g09470 vs. TrEMBL
Match: A0A151T4X4_CAJCA (Eukaryotic translation initiation factor 4E type 3 OS=Cajanus cajan GN=KK1_016626 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.0e-80
Identity = 140/144 (97.22%), Postives = 141/144 (97.92%), Query Frame = 1


Query: 68  VEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED 127
           VEGFWV YCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED
Sbjct: 92  VEGFWVCYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED 151

Query: 128 LVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGY 187
           LVLALVGDQLD+GDNICGAVLSIRFNEDILSVWNRNASDHQAVM LRDSIKRHLKLPH Y
Sbjct: 152 LVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSY 211

Query: 188 VMEYKPHDASLRDNSSYRNTWLRG 212
           VMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 212 VMEYKPHDASLRDNSSYRNTWLRG 235

[Close]

BLAST of Cp4.1LG03g09470 vs. TrEMBL
Match: A0A061F0M0_THECC (Cap-binding protein isoform 1 OS=Theobroma cacao GN=TCM_025921 PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.8e-80
Identity = 139/144 (96.53%), Postives = 141/144 (97.92%), Query Frame = 1


Query: 68  VEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED 127
           VEGFWV YCHLARPS+LPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED
Sbjct: 89  VEGFWVCYCHLARPSTLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED 148

Query: 128 LVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGY 187
           LVLALVGDQLD+GDNICGAVLSIRFNEDILSVWNRNASDHQAVM LRDSIKRHLKLPHGY
Sbjct: 149 LVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHGY 208

Query: 188 VMEYKPHDASLRDNSSYRNTWLRG 212
           VMEYKPHDASLRDNSSYRN WLRG
Sbjct: 209 VMEYKPHDASLRDNSSYRNAWLRG 232

[Close]

BLAST of Cp4.1LG03g09470 vs. TrEMBL
Match: A0A0R0FR50_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G153800 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 2.3e-80
Identity = 139/144 (96.53%), Postives = 141/144 (97.92%), Query Frame = 1


Query: 68  VEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED 127
           VEGFWV YCHLARP+SLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED
Sbjct: 38  VEGFWVCYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED 97

Query: 128 LVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGY 187
           LVLALVGDQLD+GDNICGAVLSIRFNEDILSVWNRNASDHQAVM LRDSIKRHLKLPH Y
Sbjct: 98  LVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSY 157

Query: 188 VMEYKPHDASLRDNSSYRNTWLRG 212
           VMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 158 VMEYKPHDASLRDNSSYRNTWLRG 181

[Close]

BLAST of Cp4.1LG03g09470 vs. TAIR10
Match: AT5G18110.1 (AT5G18110.1 novel cap-binding protein)

HSP 1 Score: 287.7 bits (735), Expect = 5.7e-78
Identity = 129/144 (89.58%), Postives = 133/144 (92.36%), Query Frame = 1


Query: 68  VEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED 127
           VEGFW  YCHLAR S LPSPTDLH FK+GIRPLWED ANCNGGKWIIRF KVVS RFWED
Sbjct: 78  VEGFWACYCHLARSSLLPSPTDLHFFKDGIRPLWEDGANCNGGKWIIRFSKVVSARFWED 137

Query: 128 LVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGY 187
           L+LALVGDQLD  DNICGAVLS+RFNEDI+SVWNRNASDHQAVMGLRDSIKRHLKLPH Y
Sbjct: 138 LLLALVGDQLDDADNICGAVLSVRFNEDIISVWNRNASDHQAVMGLRDSIKRHLKLPHAY 197

Query: 188 VMEYKPHDASLRDNSSYRNTWLRG 212
           VMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 198 VMEYKPHDASLRDNSSYRNTWLRG 221

[Close]

BLAST of Cp4.1LG03g09470 vs. TAIR10
Match: AT4G18040.1 (AT4G18040.1 eukaryotic translation initiation factor 4E)

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-23
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 1


Query: 68  VEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED 127
           VE FW  Y ++  PS L    D + FK  I P WED    NGGKW + F K  S + W  
Sbjct: 95  VEEFWSLYNNMKHPSKLAHGADFYCFKHIIEPKWEDPICANGGKWTMTFPKEKSDKSWLY 154

Query: 128 LVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHL 182
            +LAL+G+Q D GD ICGAV++IR  ++ +S+W +NAS+  A + +    K  L
Sbjct: 155 TLLALIGEQFDHGDEICGAVVNIRGKQERISIWTKNASNEAAQVSIGKQWKEFL 208

[Close]

BLAST of Cp4.1LG03g09470 vs. TAIR10
Match: AT1G29550.1 (AT1G29550.1 Eukaryotic initiation factor 4E protein)

HSP 1 Score: 102.1 bits (253), Expect = 4.4e-22
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 1


Query: 68  VEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED 127
           +E FW  Y ++  P+   S  DL+ FK+ I P WED    NGGKW + F K      W +
Sbjct: 100 IEEFWSLYNNIHPPTKWVSGADLYCFKDKIEPKWEDPICANGGKWSMMFPKATLECNWLN 159

Query: 128 LVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGL 174
            +LALVG+Q D GD ICGAVL+ R   D +S+W +NA++ +A + +
Sbjct: 160 TLLALVGEQFDQGDEICGAVLNFRARGDRISLWTKNAANEEAQLSI 205

[Close]

BLAST of Cp4.1LG03g09470 vs. TAIR10
Match: AT1G29590.2 (AT1G29590.2 Eukaryotic initiation factor 4E protein)

HSP 1 Score: 99.4 bits (246), Expect = 2.9e-21
Identity = 43/106 (40.57%), Postives = 64/106 (60.38%), Query Frame = 1


Query: 68  VEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWED 127
           +E FW  Y ++  P+   S +DL+ FK+ I P WED    NGGKW + F +      W +
Sbjct: 100 IEEFWSLYNNIHPPTKWVSGSDLYCFKDKIEPKWEDPICANGGKWTMFFPRATLESNWLN 159

Query: 128 LVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGL 174
            +LALVG+Q D GD ICGAVL+ R   D +S+W + A++ +A + +
Sbjct: 160 TLLALVGEQFDQGDEICGAVLNFRTRGDRISLWTKKAANEEAQLSI 205

[Close]

BLAST of Cp4.1LG03g09470 vs. TAIR10
Match: AT5G35620.1 (AT5G35620.1 Eukaryotic initiation factor 4E protein)

HSP 1 Score: 92.8 bits (229), Expect = 2.7e-19
Identity = 48/137 (35.04%), Postives = 72/137 (52.55%), Query Frame = 1


Query: 68  VEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKW---IIRFKKVVSGRF 127
           VE FW  +  + + S L +  ++HLFK G+ P WED    NGGKW   +   +K    + 
Sbjct: 59  VEDFWGLHETIFQTSKLTANAEIHLFKAGVEPKWEDPECANGGKWTWVVTANRKEALDKG 118

Query: 128 WEDLVLALVGDQLDFGDNICGAVLSIR--FNEDILSVWNRNASDHQAVMGLRDSIKRHLK 187
           W + ++AL+G+Q D  D ICG V S+R    +D LS+W R  S+   +MG+    K  L 
Sbjct: 119 WLETLMALIGEQFDEADEICGVVASVRPQSKQDKLSLWTRTKSNEAVLMGIGKKWKEILD 178

Query: 188 LPHGYVMEYKPHDASLR 200
           +     + +  HD S R
Sbjct: 179 VTD--KITFNNHDDSRR 193

[Close]

BLAST of Cp4.1LG03g09470 vs. NCBI nr
Match: gi|659130024|ref|XP_008464961.1| (PREDICTED: eukaryotic translation initiation factor NCBP [Cucumis melo])

HSP 1 Score: 335.5 bits (859), Expect = 6.7e-89
Identity = 172/238 (72.27%), Postives = 180/238 (75.63%), Query Frame = 1


Query: 1   MELVTEKKDFDSANDNNKLNSAQAVLDSSYP----------------PSVAADETGSNNN 60
           ME V EK+DFDSANDNNK NSAQ +LDSS+                   +A D     + 
Sbjct: 1   MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHP 60

Query: 61  SKEA-------EDLSERVARDLKDGLHPL----KVEGFWVSYCHLARPSSLPSPTDLHLF 120
            K              R     +D +  +     VEGFWVSYCHLARPSSLPSPTDLHLF
Sbjct: 61  LKHKFAFWYTRRTPGVRTQTSYEDNIKKIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLF 120

Query: 121 KEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFN 180
           KEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFN
Sbjct: 121 KEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFN 180

Query: 181 EDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 212
           EDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 181 EDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 238

[Close]

BLAST of Cp4.1LG03g09470 vs. NCBI nr
Match: gi|947121961|gb|KRH70167.1| (hypothetical protein GLYMA_02G072700 [Glycine max])

HSP 1 Score: 333.6 bits (854), Expect = 2.6e-88
Identity = 168/218 (77.06%), Postives = 179/218 (82.11%), Query Frame = 1


Query: 1   MELVTEKKDFDSANDNNKLNSAQAVLDSSYPPSVAADETGSNNNSKEAEDLSERVARDLK 60
           M+   EKK+    ++NN  N+    LDSS   + A D     +N+KE E   ER AR+LK
Sbjct: 1   MDFTVEKKE----SENNAENAHPTTLDSSSQLASALD-----SNNKEIE---ERQARELK 60

Query: 61  DGLHPLK-------VEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWI 120
            GLHPLK       VEGFWV YCHLARP+SLPSPTDLHLFKEGIRPLWEDSANCNGGKWI
Sbjct: 61  AGLHPLKKIVEFSTVEGFWVCYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWI 120

Query: 121 IRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGL 180
           IRFKKVVSGRFWEDLVLALVGDQLD+GDNICGAVLSIRFNEDILSVWNRNASDHQAVM L
Sbjct: 121 IRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMAL 180

Query: 181 RDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 212
           RDSIKRHLKLPH YVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 181 RDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG 206

[Close]

BLAST of Cp4.1LG03g09470 vs. NCBI nr
Match: gi|449446752|ref|XP_004141135.1| (PREDICTED: eukaryotic translation initiation factor NCBP [Cucumis sativus])

HSP 1 Score: 332.0 bits (850), Expect = 7.4e-88
Identity = 169/238 (71.01%), Postives = 179/238 (75.21%), Query Frame = 1


Query: 1   MELVTEKKDFDSANDNNKLNSAQAVLDSSYP----------------PSVAADETGSNNN 60
           ME V E +DFDSANDNNK NSAQ +LDSS+                   +A D     + 
Sbjct: 1   MEFVGENRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEELSERIARDLKDGLHP 60

Query: 61  SKEA-------EDLSERVARDLKDGLHPL----KVEGFWVSYCHLARPSSLPSPTDLHLF 120
            K              R     +D +  +     VEGFW+SYCHLARP+SLPSPTDLHLF
Sbjct: 61  LKHKFAFWYTRRTPGVRTQTSYEDNIKKIVDFSSVEGFWISYCHLARPASLPSPTDLHLF 120

Query: 121 KEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFN 180
           KEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFN
Sbjct: 121 KEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFN 180

Query: 181 EDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 212
           EDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 181 EDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 238

[Close]

BLAST of Cp4.1LG03g09470 vs. NCBI nr
Match: gi|645270600|ref|XP_008240529.1| (PREDICTED: eukaryotic translation initiation factor NCBP [Prunus mume])

HSP 1 Score: 317.8 bits (813), Expect = 1.5e-83
Identity = 161/243 (66.26%), Postives = 183/243 (75.31%), Query Frame = 1


Query: 1   MELVTEKKDFDSANDNNKLNSAQAVLDSSYPPSVAADETGSNNNSKEAEDLSERVARDLK 60
           MELV EK+  D  N+NN  N+++   ++SY  ++       + N+KE+++  ER ARDLK
Sbjct: 1   MELVAEKES-DQQNNNN--NNSEKNNNTSYAQALVDSH---DYNNKESDEFRERQARDLK 60

Query: 61  DGLHPLK--------------------------------VEGFWVSYCHLARPSSLPSPT 120
            GLHPLK                                VEGFWV YCHLARP+SLPSPT
Sbjct: 61  AGLHPLKHKFVFWYTRRTLGMRSQTPYEDNIKKIVDFTTVEGFWVCYCHLARPASLPSPT 120

Query: 121 DLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVL 180
           DLHLFK+GIRPLWEDSANC+GGKWIIRFKK VSGRFWEDLVLALVGDQLD+G+NICGAVL
Sbjct: 121 DLHLFKDGIRPLWEDSANCHGGKWIIRFKKAVSGRFWEDLVLALVGDQLDYGENICGAVL 180

Query: 181 SIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTW 212
           SIRFNEDILSVWNRNASDHQAVM LRD+IKR+LKLPH Y+MEYKPHDASLRDNSSYRNTW
Sbjct: 181 SIRFNEDILSVWNRNASDHQAVMALRDAIKRNLKLPHSYLMEYKPHDASLRDNSSYRNTW 237

[Close]

BLAST of Cp4.1LG03g09470 vs. NCBI nr
Match: gi|595806900|ref|XP_007202516.1| (hypothetical protein PRUPE_ppa010907mg [Prunus persica])

HSP 1 Score: 308.5 bits (789), Expect = 8.8e-81
Identity = 156/243 (64.20%), Postives = 176/243 (72.43%), Query Frame = 1


Query: 1   MELVTEKKDFDSANDNNKLNSAQAVLDSSYPPSVAADETGSNNNSKEAEDLSERVARDLK 60
           MELV EK+     N+NN   +     ++SY  ++         +S E+++  ER ARDLK
Sbjct: 1   MELVAEKESDQQNNNNNSEKNN----NTSYAQALV--------DSHESDEFRERQARDLK 60

Query: 61  DGLHPLK--------------------------------VEGFWVSYCHLARPSSLPSPT 120
            GLHPLK                                VE FWV YCHLARP++LPSPT
Sbjct: 61  AGLHPLKHKFVFWYTRRTLGMRSQTPYEDNIKKIVDFTTVEAFWVCYCHLARPATLPSPT 120

Query: 121 DLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVL 180
           DLHLFK+GIRPLWEDSANC+GGKWIIRFKK VSGRFWEDLVLALVGDQLD+G+NICGAVL
Sbjct: 121 DLHLFKDGIRPLWEDSANCHGGKWIIRFKKAVSGRFWEDLVLALVGDQLDYGENICGAVL 180

Query: 181 SIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTW 212
           SIRFNEDILSVWNRNASDHQAVM LRD+IKR+LKLPH Y+MEYKPHDASLRDNSSYRNTW
Sbjct: 181 SIRFNEDILSVWNRNASDHQAVMALRDAIKRNLKLPHSYLMEYKPHDASLRDNSSYRNTW 231

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g09470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IF4E5_ARATH	1.0e-76	89.58	Eukaryotic translation initiation factor NCBP OS=Arabidopsis thaliana GN=NCBP PE...	[more]
IF4E3_WHEAT	1.1e-75	88.89	Eukaryotic translation initiation factor NCBP OS=Triticum aestivum GN=NCBP PE=2 ...	[more]
IF4E3_ORYSJ	7.2e-75	87.50	Eukaryotic translation initiation factor NCBP OS=Oryza sativa subsp. japonica GN...	[more]
IF4E4_CAEEL	1.8e-41	52.14	Eukaryotic translation initiation factor 4E-4 OS=Caenorhabditis elegans GN=ife-4...	[more]
IF4E2_MOUSE	6.8e-41	53.03	Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus GN=Eif4e2 PE=...	[more]

BLAST of Cp4.1LG03g09470 vs. TrEMBL


Match Name	E-value	Identity	Description
I1JD62_SOYBN	1.8e-88	77.06	Uncharacterized protein OS=Glycine max GN=GLYMA_02G072700 PE=3 SV=1	[more]
M5WA91_PRUPE	6.1e-81	64.20	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010907mg PE=3 SV=1	[more]
A0A151T4X4_CAJCA	1.0e-80	97.22	Eukaryotic translation initiation factor 4E type 3 OS=Cajanus cajan GN=KK1_01662...	[more]
A0A061F0M0_THECC	1.8e-80	96.53	Cap-binding protein isoform 1 OS=Theobroma cacao GN=TCM_025921 PE=3 SV=1	[more]
A0A0R0FR50_SOYBN	2.3e-80	96.53	Uncharacterized protein OS=Glycine max GN=GLYMA_16G153800 PE=3 SV=1	[more]

BLAST of Cp4.1LG03g09470 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18110.1	5.7e-78	89.58	novel cap-binding protein	[more]
AT4G18040.1	2.3e-23	42.11	eukaryotic translation initiation factor 4E	[more]
AT1G29550.1	4.4e-22	42.45	Eukaryotic initiation factor 4E protein	[more]
AT1G29590.2	2.9e-21	40.57	Eukaryotic initiation factor 4E protein	[more]
AT5G35620.1	2.7e-19	35.04	Eukaryotic initiation factor 4E protein	[more]

BLAST of Cp4.1LG03g09470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130024\|ref\|XP_008464961.1\|	6.7e-89	72.27	PREDICTED: eukaryotic translation initiation factor NCBP [Cucumis melo]	[more]
gi\|947121961\|gb\|KRH70167.1\|	2.6e-88	77.06	hypothetical protein GLYMA_02G072700 [Glycine max]	[more]
gi\|449446752\|ref\|XP_004141135.1\|	7.4e-88	71.01	PREDICTED: eukaryotic translation initiation factor NCBP [Cucumis sativus]	[more]
gi\|645270600\|ref\|XP_008240529.1\|	1.5e-83	66.26	PREDICTED: eukaryotic translation initiation factor NCBP [Prunus mume]	[more]
gi\|595806900\|ref\|XP_007202516.1\|	8.8e-81	64.20	hypothetical protein PRUPE_ppa010907mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006413	translational initiation

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Molecular Function**
Term	Definition
GO:0003743	translation initiation factor activity
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR023398	TIF_eIF4e-like
IPR019770	TIF_eIF_4E_CS
IPR001040	TIF_eIF_4E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g09470.1	Cp4.1LG03g09470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001040	Translation Initiation factor eIF- 4e	PANTHER	PTHR11960	EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED	coord: 68..209 score: 5.6
IPR001040	Translation Initiation factor eIF- 4e	PFAM	PF01652	IF4E	coord: 67..192 score: 1.2
IPR019770	Eukaryotic translation initiation factor 4E (eIF-4E), conserved site	PROSITE	PS00813	IF4E	coord: 89..112 scor
IPR023398	Translation Initiation factor eIF- 4e-like	GENE3D	G3DSA:3.30.760.10		coord: 67..206 score: 1.1
IPR023398	Translation Initiation factor eIF- 4e-like	unknown	SSF55418	eIF4e-like	coord: 68..207 score: 5.49
None	No IPR available	PANTHER	PTHR11960:SF18	4EHP, ISOFORM B	coord: 68..209 score: 5.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG03g09470	CmaCh14G011120	Cucurbita maxima (Rimu)	cmacpeB283
Cp4.1LG03g09470	CmoCh14G011180	Cucurbita moschata (Rifu)	cmocpeB245
Cp4.1LG03g09470	Cla017165	Watermelon (97103) v1	cpewmB599
Cp4.1LG03g09470	Csa3G842730	Cucumber (Chinese Long) v2	cpecuB607
Cp4.1LG03g09470	MELO3C026612	Melon (DHL92) v3.5.1	cpemeB566
Cp4.1LG03g09470	ClCG10G013430	Watermelon (Charleston Gray)	cpewcgB548
Cp4.1LG03g09470	CSPI03G40680	Wild cucumber (PI 183967)	cpecpiB609
Cp4.1LG03g09470	Lsi03G013050	Bottle gourd (USVL1VR-Ls)	cpelsiB500
Cp4.1LG03g09470	MELO3C026612.2	Melon (DHL92) v3.6.1	cpemedB673
Cp4.1LG03g09470	CsaV3_3G043200	Cucumber (Chinese Long) v3	cpecucB0757
Cp4.1LG03g09470	Bhi11G001303	Wax gourd	cpewgoB0742
Cp4.1LG03g09470	CsGy3G038160	Cucumber (Gy14) v2	cgybcpeB405
Cp4.1LG03g09470	Carg26631	Silver-seed gourd	carcpeB0589

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG03g09470	Cucurbita pepo (Zucchini)	cpecpeB450
Cp4.1LG03g09470	Cucumber (Gy14) v1	cgycpeB0481
Cp4.1LG03g09470	Wild cucumber (PI 183967)	cpecpiB619
Cp4.1LG03g09470	Cucumber (Chinese Long) v2	cpecuB617
Cp4.1LG03g09470	Watermelon (Charleston Gray)	cpewcgB544
Cp4.1LG03g09470	Watermelon (97103) v1	cpewmB595
Cp4.1LG03g09470	Cucumber (Gy14) v2	cgybcpeB554
Cp4.1LG03g09470	Silver-seed gourd	carcpeB0983
Cp4.1LG03g09470	Cucumber (Chinese Long) v3	cpecucB0769