Cp4.1LG03g09080 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGGTACGTCCGCCATTCAGTAATTTTGATCTTTCAGAGACACTCTGTAGGCCGTATCGTGATAATTGATAAGGGCGAGCCAAATATCCTCCTCTCTCCGCCACCGCTTCCTTTCCTCTTCCGGCCACCATCTCCGCCTCCTCCTCACTCTTCACTTCTTTCGTTTCTCCGGCTCTTCTCCAGGAAGCAGCGTCGTGGAGAATCCACTTGCACAGTTCTGATATTGGATTTCCAATTCCTTGCCGATGGATGCAGTGCGGCTTTGATCGAGGGGCTTCGGATTGCCCGAATCTTCGCCTGATAACAGGTCTTTTCTATTCTCGGTTCTGAATTTATTGTGAGTGGTTTTCAAGATTGTTTTGATTTGTTGTATCGAGATCTTTCTTGGGTCGTTGTTCTAGGTTTTTCAAAAAAGTCAGTTTCTGATTTCACGGGGGAATTTGGATTTCATGAAAATTTGGAGAGTTTCCATGCTATTCTGTGGATAATTGAAGCAAAATTTTCTAACAGTGGATAAAATTGGTGCTTAGGGATTACTATTTTTATTATTATTTAGGGTATGTGGAATTCTTGAGGCTTTTGTACTGACAGAAGTGAAGCTTTTTATTGTTCAATGGCAGGAGCAGAGATGGTTCGATTGGCTTCTTGAATTTGAGAATTGTTTTTAGTTGTGAGGTTAGAATGAAAGGAAAGATTCGGTGTAGATACTAATGGGAAATAACTCAAGAGAAGATATAATGGACCTCGATTTGAATCAGGAGCCTTTGGATCAATCTTATGATTCAGTGGTAGGGTTAGACACCATACTGAATGACCTTGAAAATGCTCATGGACGCATTGAAGAACGCATTCGGCAACTTGAAGCTGTTACGACAAGGGCTACACGGCGACAGAGATGGCGACATGCCCCGACTGTAACTGAACCTGCTGACACTGCAGCAGCTTACGCTCACCTTGAAAGACATGATACTGGTGATGATAGTGCTGCCCAGGAAAGAGTAGCTAATTCTACCAAAACTAGTAAAAAGGATGGCTCTCATTTGGTTGCCAAAGCATTGGGGATGGATTCAGAGCTGAAGCCCACTGGAAACAAGATGGGAAGCTTTTTTGATTGTAATATATGCTTGGATGTTGCGAAGGATCCAATATTGACATGTTGTGGTCACTTATTTTGCTGGTCTTGCTTTTATCAGTTATCTTATGTTCATTCAAATGCCAAGGAATGCCCTGAATGTCAAGGTGAAGTTACAGATACTAGCATCATTCCAATCTATGGCCATGGGAATGGTAATCGTGCTCAGAAGTCGAAACCGAATGATTCTGGTTTGAAGGTTCCTCCCAGGCCACGTGCTCAAAGGATTGAGAGTATGAGGCAACAAATTTTGTTCCAGGGGGCATCTTCTTCTCTCATTGAAGAAAGGATCCAGCAGATTAGCAACATGATTGGTGCAATGGGGGAGCAATCTCGATCGCAGAATTCTGACATTATGCATGGAAGGATTGAGAGGACTAATTTGTTGGGCCGGAGGCGTCGTGCATCCCAAGTATTACCTGTTACTGAGAATGAGAGCAATCAACAAAGCCGATCCCTTCAAGTGTCTAGGTTGCTACTGCAAGGTGCTGCCTCATTTTCATCTCTTTCATCTGCTTTGAATTCTGCAATGGACTCTGCTGAAAGATTAGTTGAGGACCTTGAAACATACATTCACAATCATGGCGCAAGTAGAAGCCGCCCACACTCTCTACCAAATAATCCTAACAATGGAGACCCCTTGTCCGGTATTGCTGCAACTGTGCGATCGGATGGTATCCCTCCAGATCCTGTTGGCGGAATCACCTTTCTGGTTCCCCAATTCGAGTCATCTTCTAGAAGTATGGATATTGCTACTAATATTGCACGTCTAGAAAACCAGACCAGTAGTGGTACAGAATTCGACCGAATAATACTCCCATCTCCATCAACCAGGAGGAGAAGTGAGTTACCACGACGGTCAGATTTGGACAATGAAAATTTACAGGAGCGAAGGAGGAGGAGATTGGGATAATTGAATTGATAATGAAGTTCTTTCTCATCGTATGAGCTATTTATTTACTTTCACTTTTTTCTTTTAAGTTATTGAATTTTCTTCAACCTTGGGAAGATCCTTGCTGGTGTGAAATCCCCACATAAATAACAGCTAGCCTAAGAAGTTTGATGGTCTATTCTCTGATAAGGTACTGGAAGATTATGAAGTGGTGCGATCTGGCCAGCTTTCCAGCTGCAGCACACTCCTATCATGTGGCGAACTGGCTGTTGCGAAAGCGTTTGTTGAATTTTTTCCTCCTTCATAGAAGATGCATATTTGATATCGGTATTGCTATGTTGGTCAAATAGCAGATGGTGTAATGGTAAGCCCCTGTAATATATACACGCTATCTGCATGTCCCTTCCTCCTCCCAATGAATTTGGCATCCAAAATTTCCCATGTTCTAGATAGATAGATTGTGCTGCTGTTGGAAATTACTGGAATCAATCTGTACCTTTTCTTCTGAAATTCTTTCGTTGAAGAGAAGACTTGTGTTTGAGGGAAAACCTTTGCGTTTGCTTCTTCTTTATTGCCTTTTATTTTACTATTATATTGATCTTGGTTTTATCATAACATACTAATGGCCAGGCAACACTTCATTTGCAATTTTTCTTGAATAAAAGAACTGATCAAAGCATGCCTACATAGACTATGCTCATTCTGCCCTACTGAACAAGACATTGGTAATTGCTGCCTTTTGATATTGTTTCTTTAGGAGGAATCCTCTCATTTCACATAGGTGGGTGAGAGAAACTCATATCTATATATTGGATCCTCTGATTATGAGAATTATGCTTCTTTTTAGTTCTTCCCGTCAATGTTTGATAATTAAATGTTGATGGGCAATCTTTACATGTTCTGTCAACAGTTGATCTTCTGTTAATGTTGTTATCTACATGGCCTAACTAAGATTGGAGTGGAGTAACTAGGATTAGAAGGTGTAGTATTTGACCATATTCTATAATATTTGACTTCCACATATGAGAAGTCTAGTTTGGAAGGACAGGAAATTTGAGGAAGTGTTGGATTATGTGAACTGCAAGGAAGAATGATTTGTGATGCTGAATTTTTGGGTGATGAACAGATTTGCTTGTAAAGTAAGAAGATGAAGAGGATATGAATATGAATAGAACCAGTTGGGCATCCCATCAGAAATGATAAGACAGACAGAGTGCATGGGGATGGGTGAGGCCCTCCAATTATTGCCTTCATCCCTTCCCCACACACCATTAGCTCTCACCTTTTACTGTCTTTTAGGGGCCCATCCCTTATCTCTATATCCCTACTCTGTTTCTTACCATTCTATTAGGGTGTTTCTTACTCTTGGTTAGGGTTTTTTCTACTTTGGATATGCTTGTTTAGTTGTCTCGAGATTATTTACTTCACGTGTTATGATCTTCGTGTTATTAGACAAACATATTGGTTGCTTTGACAATTTTATAAGTTTGATGGAGTAATTGTTTTGAATGGTTA CCGGTACGTCCGCCATTCAGTAATTTTGATCTTTCAGAGACACTCTGTAGGCCGTATCGTGATAATTGATAAGGGCGAGCCAAATATCCTCCTCTCTCCGCCACCGCTTCCTTTCCTCTTCCGGCCACCATCTCCGCCTCCTCCTCACTCTTCACTTCTTTCGTTTCTCCGGCTCTTCTCCAGGAAGCAGCGTCGTGGAGAATCCACTTGCACAGTTCTGATATTGGATTTCCAATTCCTTGCCGATGGATGCAGTGCGGCTTTGATCGAGGGGCTTCGGATTGCCCGAATCTTCGCCTGATAACAGGAGCAGAGATGGTTCGATTGGCTTCTTGAATTTGAGAATTGTTTTTAGTTGTGAGGTTAGAATGAAAGGAAAGATTCGGTGTAGATACTAATGGGAAATAACTCAAGAGAAGATATAATGGACCTCGATTTGAATCAGGAGCCTTTGGATCAATCTTATGATTCAGTGGTAGGGTTAGACACCATACTGAATGACCTTGAAAATGCTCATGGACGCATTGAAGAACGCATTCGGCAACTTGAAGCTGTTACGACAAGGGCTACACGGCGACAGAGATGGCGACATGCCCCGACTGTAACTGAACCTGCTGACACTGCAGCAGCTTACGCTCACCTTGAAAGACATGATACTGGTGATGATAGTGCTGCCCAGGAAAGAGTAGCTAATTCTACCAAAACTAGTAAAAAGGATGGCTCTCATTTGGTTGCCAAAGCATTGGGGATGGATTCAGAGCTGAAGCCCACTGGAAACAAGATGGGAAGCTTTTTTGATTGTAATATATGCTTGGATGTTGCGAAGGATCCAATATTGACATGTTGTGGTCACTTATTTTGCTGGTCTTGCTTTTATCAGTTATCTTATGTTCATTCAAATGCCAAGGAATGCCCTGAATGTCAAGGTGAAGTTACAGATACTAGCATCATTCCAATCTATGGCCATGGGAATGGTAATCGTGCTCAGAAGTCGAAACCGAATGATTCTGGTTTGAAGGTTCCTCCCAGGCCACGTGCTCAAAGGATTGAGAGTATGAGGCAACAAATTTTGTTCCAGGGGGCATCTTCTTCTCTCATTGAAGAAAGGATCCAGCAGATTAGCAACATGATTGGTGCAATGGGGGAGCAATCTCGATCGCAGAATTCTGACATTATGCATGGAAGGATTGAGAGGACTAATTTGTTGGGCCGGAGGCGTCGTGCATCCCAAGTATTACCTGTTACTGAGAATGAGAGCAATCAACAAAGCCGATCCCTTCAAGTGTCTAGGTTGCTACTGCAAGGTGCTGCCTCATTTTCATCTCTTTCATCTGCTTTGAATTCTGCAATGGACTCTGCTGAAAGATTAGTTGAGGACCTTGAAACATACATTCACAATCATGGCGCAAGTAGAAGCCGCCCACACTCTCTACCAAATAATCCTAACAATGGAGACCCCTTGTCCGGTATTGCTGCAACTGTGCGATCGGATGGTATCCCTCCAGATCCTGTTGGCGGAATCACCTTTCTGGTTCCCCAATTCGAGTCATCTTCTAGAAGTATGGATATTGCTACTAATATTGCACGTCTAGAAAACCAGACCAGTAGTGGTACAGAATTCGACCGAATAATACTCCCATCTCCATCAACCAGGAGGAGAAGTGAGTTACCACGACGGTCAGATTTGGACAATGAAAATTTACAGGAGCGAAGGAGGAGGAGATTGGGATAATTGAATTGATAATGAAGTTCTTTCTCATCGTATGAGCTATTTATTTACTTTCACTTTTTTCTTTTAAGTTATTGAATTTTCTTCAACCTTGGGAAGATCCTTGCTGGTGTGAAATCCCCACATAAATAACAGCTAGCCTAAGAAGTTTGATGGTCTATTCTCTGATAAGGTACTGGAAGATTATGAAGTGGTGCGATCTGGCCAGCTTTCCAGCTGCAGCACACTCCTATCATGTGGCGAACTGGCTGTTGCGAAAGCGTTTGTTGAATTTTTTCCTCCTTCATAGAAGATGCATATTTGATATCGGTATTGCTATGTTGGTCAAATAGCAGATGGTGTAATGATTTGCTTGTAAAGTAAGAAGATGAAGAGGATATGAATATGAATAGAACCAGTTGGGCATCCCATCAGAAATGATAAGACAGACAGAGTGCATGGGGATGGGTGAGGCCCTCCAATTATTGCCTTCATCCCTTCCCCACACACCATTAGCTCTCACCTTTTACTGTCTTTTAGGGGCCCATCCCTTATCTCTATATCCCTACTCTGTTTCTTACCATTCTATTAGGGTGTTTCTTACTCTTGGTTAGGGTTTTTTCTACTTTGGATATGCTTGTTTAGTTGTCTCGAGATTATTTACTTCACGTGTTATGATCTTCGTGTTATTAGACAAACATATTGGTTGCTTTGACAATTTTATAAGTTTGATGGAGTAATTGTTTTGAATGGTTA ATGGGAAATAACTCAAGAGAAGATATAATGGACCTCGATTTGAATCAGGAGCCTTTGGATCAATCTTATGATTCAGTGGTAGGGTTAGACACCATACTGAATGACCTTGAAAATGCTCATGGACGCATTGAAGAACGCATTCGGCAACTTGAAGCTGTTACGACAAGGGCTACACGGCGACAGAGATGGCGACATGCCCCGACTGTAACTGAACCTGCTGACACTGCAGCAGCTTACGCTCACCTTGAAAGACATGATACTGGTGATGATAGTGCTGCCCAGGAAAGAGTAGCTAATTCTACCAAAACTAGTAAAAAGGATGGCTCTCATTTGGTTGCCAAAGCATTGGGGATGGATTCAGAGCTGAAGCCCACTGGAAACAAGATGGGAAGCTTTTTTGATTGTAATATATGCTTGGATGTTGCGAAGGATCCAATATTGACATGTTGTGGTCACTTATTTTGCTGGTCTTGCTTTTATCAGTTATCTTATGTTCATTCAAATGCCAAGGAATGCCCTGAATGTCAAGGTGAAGTTACAGATACTAGCATCATTCCAATCTATGGCCATGGGAATGGTAATCGTGCTCAGAAGTCGAAACCGAATGATTCTGGTTTGAAGGTTCCTCCCAGGCCACGTGCTCAAAGGATTGAGAGTATGAGGCAACAAATTTTGTTCCAGGGGGCATCTTCTTCTCTCATTGAAGAAAGGATCCAGCAGATTAGCAACATGATTGGTGCAATGGGGGAGCAATCTCGATCGCAGAATTCTGACATTATGCATGGAAGGATTGAGAGGACTAATTTGTTGGGCCGGAGGCGTCGTGCATCCCAAGTATTACCTGTTACTGAGAATGAGAGCAATCAACAAAGCCGATCCCTTCAAGTGTCTAGGTTGCTACTGCAAGGTGCTGCCTCATTTTCATCTCTTTCATCTGCTTTGAATTCTGCAATGGACTCTGCTGAAAGATTAGTTGAGGACCTTGAAACATACATTCACAATCATGGCGCAAGTAGAAGCCGCCCACACTCTCTACCAAATAATCCTAACAATGGAGACCCCTTGTCCGGTATTGCTGCAACTGTGCGATCGGATGGTATCCCTCCAGATCCTGTTGGCGGAATCACCTTTCTGGTTCCCCAATTCGAGTCATCTTCTAGAAGTATGGATATTGCTACTAATATTGCACGTCTAGAAAACCAGACCAGTAGTGGTACAGAATTCGACCGAATAATACTCCCATCTCCATCAACCAGGAGGAGAAGTGAGTTACCACGACGGTCAGATTTGGACAATGAAAATTTACAGGAGCGAAGGAGGAGGAGATTGGGATAA MGNNSREDIMDLDLNQEPLDQSYDSVVGLDTILNDLENAHGRIEERIRQLEAVTTRATRRQRWRHAPTVTEPADTAAAYAHLERHDTGDDSAAQERVANSTKTSKKDGSHLVAKALGMDSELKPTGNKMGSFFDCNICLDVAKDPILTCCGHLFCWSCFYQLSYVHSNAKECPECQGEVTDTSIIPIYGHGNGNRAQKSKPNDSGLKVPPRPRAQRIESMRQQILFQGASSSLIEERIQQISNMIGAMGEQSRSQNSDIMHGRIERTNLLGRRRRASQVLPVTENESNQQSRSLQVSRLLLQGAASFSSLSSALNSAMDSAERLVEDLETYIHNHGASRSRPHSLPNNPNNGDPLSGIAATVRSDGIPPDPVGGITFLVPQFESSSRSMDIATNIARLENQTSSGTEFDRIILPSPSTRRRSELPRRSDLDNENLQERRRRRLG
BLAST of Cp4.1LG03g09080 vs. Swiss-Prot
Match: RN185_DANRE (E3 ubiquitin-protein ligase RNF185 OS=Danio rerio GN=rnf185 PE=2 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 2.2e-17 Identity = 43/121 (35.54%), Postives = 63/121 (52.07%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. Swiss-Prot
Match: RNF5_HUMAN (E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens GN=RNF5 PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 3.8e-17 Identity = 35/87 (40.23%), Postives = 54/87 (62.07%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. Swiss-Prot
Match: RN185_RAT (E3 ubiquitin-protein ligase RNF185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 8.5e-17 Identity = 43/108 (39.81%), Postives = 58/108 (53.70%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. Swiss-Prot
Match: RN185_MOUSE (E3 ubiquitin-protein ligase RNF185 OS=Mus musculus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 8.5e-17 Identity = 43/108 (39.81%), Postives = 58/108 (53.70%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. Swiss-Prot
Match: RNF5_RAT (E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus GN=Rnf5 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.4e-16 Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. TrEMBL
Match: A0A0A0LD45_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G702650 PE=4 SV=1) HSP 1 Score: 768.5 bits (1983), Expect = 4.6e-219 Identity = 403/449 (89.76%), Postives = 420/449 (93.54%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. TrEMBL
Match: M5XCN2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006264mg PE=4 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 1.7e-93 Identity = 233/438 (53.20%), Postives = 285/438 (65.07%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. TrEMBL
Match: F6HPT3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0156g00250 PE=4 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 3.3e-92 Identity = 225/454 (49.56%), Postives = 289/454 (63.66%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. TrEMBL
Match: U5GWP4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s23670g PE=4 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 2.1e-91 Identity = 217/446 (48.65%), Postives = 280/446 (62.78%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. TrEMBL
Match: B9HPS3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s02830g PE=4 SV=2) HSP 1 Score: 340.1 bits (871), Expect = 4.0e-90 Identity = 221/468 (47.22%), Postives = 282/468 (60.26%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. TAIR10
Match: AT2G44410.1 (AT2G44410.1 RING/U-box superfamily protein) HSP 1 Score: 186.4 bits (472), Expect = 3.8e-47 Identity = 110/263 (41.83%), Postives = 150/263 (57.03%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. TAIR10
Match: AT3G58030.1 (AT3G58030.1 RING/U-box superfamily protein) HSP 1 Score: 119.8 bits (299), Expect = 4.3e-27 Identity = 93/249 (37.35%), Postives = 129/249 (51.81%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. TAIR10
Match: AT1G19310.1 (AT1G19310.1 RING/U-box superfamily protein) HSP 1 Score: 107.1 bits (266), Expect = 2.9e-23 Identity = 45/95 (47.37%), Postives = 65/95 (68.42%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. TAIR10
Match: AT2G23780.1 (AT2G23780.1 RING/U-box superfamily protein) HSP 1 Score: 103.6 bits (257), Expect = 3.2e-22 Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. TAIR10
Match: AT1G74990.1 (AT1G74990.1 RING/U-box superfamily protein) HSP 1 Score: 99.0 bits (245), Expect = 7.9e-21 Identity = 42/92 (45.65%), Postives = 62/92 (67.39%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. NCBI nr
Match: gi|659123628|ref|XP_008461759.1| (PREDICTED: uncharacterized protein LOC103500286 [Cucumis melo]) HSP 1 Score: 770.0 bits (1987), Expect = 2.3e-219 Identity = 404/445 (90.79%), Postives = 420/445 (94.38%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. NCBI nr
Match: gi|449466743|ref|XP_004151085.1| (PREDICTED: uncharacterized protein LOC101212429 [Cucumis sativus]) HSP 1 Score: 768.5 bits (1983), Expect = 6.6e-219 Identity = 403/449 (89.76%), Postives = 420/449 (93.54%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. NCBI nr
Match: gi|694377489|ref|XP_009365045.1| (PREDICTED: uncharacterized protein LOC103954917 [Pyrus x bretschneideri]) HSP 1 Score: 399.8 bits (1026), Expect = 6.1e-108 Identity = 240/447 (53.69%), Postives = 299/447 (66.89%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. NCBI nr
Match: gi|694327637|ref|XP_009354676.1| (PREDICTED: E3 ubiquitin-protein ligase RNF168 [Pyrus x bretschneideri]) HSP 1 Score: 395.6 bits (1015), Expect = 1.2e-106 Identity = 241/447 (53.91%), Postives = 297/447 (66.44%), Query Frame = 1
BLAST of Cp4.1LG03g09080 vs. NCBI nr
Match: gi|657966849|ref|XP_008375127.1| (PREDICTED: uncharacterized protein LOC103438358 [Malus domestica]) HSP 1 Score: 389.8 bits (1000), Expect = 6.3e-105 Identity = 239/447 (53.47%), Postives = 295/447 (66.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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