Cp4.1LG03g08440 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG03g08440
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Amine oxidase, putative
Location	Cp4.1LG03 : 2710070 .. 2711482 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTCAGCGCCGTCGGAACATGTCTTCCCTGCCACTCTATTTCTTACCCACGTGGCAGCCTCGTGTTCAAGCCTCCCCACGCCTCCTCCTCCTCCCTTTCCCTCTCCCCTGCTCCACCCGCCAAAACTGGAGTCATCGTCGTCGGAGCTGGCCTGGCTGGCCTGGCCGCCGCCACCCACCTCCGCTCCAAAAACATCCCATTCCTCCTCCTTGAAGCCTCCGACGGCGTTGGTGGCCGTGTCCGCACCGACTTCGTCGACGGCTTCCTCCTCGATCGCGGGTTCCAAATCTTCATCACCGCCTACCCTGAAGCTCAAGCTCTCCTCGACTACCAATCTCTCCGCCTCCAAAAATTCTACTCCGGCGCCCTCGTCTACTTCGACGGCCAATTCCACACCGTCGCCGACCCTTTGCGCCACTTCACCGACTCCCTCGCCTCTCTAACCAACCCAATTGGCTCGGTCATCGACAAATTGCTTATTGGGCTCACCAGAGCCAGAGTTCTAGGCAAGTCCGATCGGGAAATTTTCACCGCCGGAGAGGCTTCCACCATGGAATTATTGAAGGAAATTGGGTTTTCCGATTCCATAATCACCCGTTTTTTCCGGCCATTTTTCGGCGGGATTTTCTTCGATCCCGAATTGGAAACTTCCTCCCGATTATTTAATTTCATTTTCAAATGTCTCGCACTCGGCGAAAATACTCTTCCGGCCAACGGAATCGGCGCAATCCCTCAACAATTAGCAGCAAATCTCCCGCCGGAAACCATTTTGCTGAATTCCAGAGTCGTCTCCGTCGATTTCGAATCGAAATCGCCAATTGTGAAGTTACAGAGTGGGGAAATTATAGCCAGCGAAATGGGGGTGATCGTTGCGGTGGAGGAACCGGAGGCAGAGAGATTACTAGCCGGAAGACGAAAAATCGGCAGCCGGAAACCGCCTAGGAGTACGGTATGTTTGTATTTCGCGGCGGATCGGGACAGGATTCCGGTGAGGGAACCAGTGCTGTTTCTGAATGGATCGGGGAAGGGAATTGTTAACAATATGTTTTTCGCGACAAACGTGGCGCCGTCGTATGGACCGGCGGAGAAGGTGCTGGTGTCGGTATCGTTGATCGGGAAATTTGAGGATGTTGGAGATGAGGATCTGACGGCTGAGGTTATTCGGGAGATGTCGGATTGGTTTGGGGAATCAACGATTGAGGGATGGAAGCATTTACGGACGTATAGGATTGGTTTTGCACAGCCGAATCAATCTCCACCGTCGGATTTGATGAAAGATCCAACGGTGGAGAGTGGGCTGTACGTGTGTGGTGATTATTTGACTTCCGCCACGTTCGACGGCGCGTTGGTCTCCGGCAGGAAGGCCGTCGAAGCCTTAGTGAGAGAAAGGGCCGTCGCTTACGTATGA

mRNA sequence

ATGAGTTTCAGCGCCGTCGGAACATGTCTTCCCTGCCACTCTATTTCTTACCCACGTGGCAGCCTCGTGTTCAAGCCTCCCCACGCCTCCTCCTCCTCCCTTTCCCTCTCCCCTGCTCCACCCGCCAAAACTGGAGTCATCGTCGTCGGAGCTGGCCTGGCTGGCCTGGCCGCCGCCACCCACCTCCGCTCCAAAAACATCCCATTCCTCCTCCTTGAAGCCTCCGACGGCGTTGGTGGCCGTGTCCGCACCGACTTCGTCGACGGCTTCCTCCTCGATCGCGGGTTCCAAATCTTCATCACCGCCTACCCTGAAGCTCAAGCTCTCCTCGACTACCAATCTCTCCGCCTCCAAAAATTCTACTCCGGCGCCCTCGTCTACTTCGACGGCCAATTCCACACCGTCGCCGACCCTTTGCGCCACTTCACCGACTCCCTCGCCTCTCTAACCAACCCAATTGGCTCGGTCATCGACAAATTGCTTATTGGGCTCACCAGAGCCAGAGTTCTAGGCAAGTCCGATCGGGAAATTTTCACCGCCGGAGAGGCTTCCACCATGGAATTATTGAAGGAAATTGGGTTTTCCGATTCCATAATCACCCGTTTTTTCCGGCCATTTTTCGGCGGGATTTTCTTCGATCCCGAATTGGAAACTTCCTCCCGATTATTTAATTTCATTTTCAAATGTCTCGCACTCGGCGAAAATACTCTTCCGGCCAACGGAATCGGCGCAATCCCTCAACAATTAGCAGCAAATCTCCCGCCGGAAACCATTTTGCTGAATTCCAGAGTCGTCTCCGTCGATTTCGAATCGAAATCGCCAATTGTGAAGTTACAGAGTGGGGAAATTATAGCCAGCGAAATGGGGGTGATCGTTGCGGTGGAGGAACCGGAGGCAGAGAGATTACTAGCCGGAAGACGAAAAATCGGCAGCCGGAAACCGCCTAGGAGTACGGTATGTTTGTATTTCGCGGCGGATCGGGACAGGATTCCGGTGAGGGAACCAGTGCTGTTTCTGAATGGATCGGGGAAGGGAATTGTTAACAATATGTTTTTCGCGACAAACGTGGCGCCGTCGTATGGACCGGCGGAGAAGGTGCTGGTGTCGGTATCGTTGATCGGGAAATTTGAGGATGTTGGAGATGAGGATCTGACGGCTGAGGTTATTCGGGAGATGTCGGATTGGTTTGGGGAATCAACGATTGAGGGATGGAAGCATTTACGGACGTATAGGATTGGTTTTGCACAGCCGAATCAATCTCCACCGTCGGATTTGATGAAAGATCCAACGGTGGAGAGTGGGCTGTACGTGTGTGGTGATTATTTGACTTCCGCCACGTTCGACGGCGCGTTGGTCTCCGGCAGGAAGGCCGTCGAAGCCTTAGTGAGAGAAAGGGCCGTCGCTTACGTATGA

Coding sequence (CDS)

ATGAGTTTCAGCGCCGTCGGAACATGTCTTCCCTGCCACTCTATTTCTTACCCACGTGGCAGCCTCGTGTTCAAGCCTCCCCACGCCTCCTCCTCCTCCCTTTCCCTCTCCCCTGCTCCACCCGCCAAAACTGGAGTCATCGTCGTCGGAGCTGGCCTGGCTGGCCTGGCCGCCGCCACCCACCTCCGCTCCAAAAACATCCCATTCCTCCTCCTTGAAGCCTCCGACGGCGTTGGTGGCCGTGTCCGCACCGACTTCGTCGACGGCTTCCTCCTCGATCGCGGGTTCCAAATCTTCATCACCGCCTACCCTGAAGCTCAAGCTCTCCTCGACTACCAATCTCTCCGCCTCCAAAAATTCTACTCCGGCGCCCTCGTCTACTTCGACGGCCAATTCCACACCGTCGCCGACCCTTTGCGCCACTTCACCGACTCCCTCGCCTCTCTAACCAACCCAATTGGCTCGGTCATCGACAAATTGCTTATTGGGCTCACCAGAGCCAGAGTTCTAGGCAAGTCCGATCGGGAAATTTTCACCGCCGGAGAGGCTTCCACCATGGAATTATTGAAGGAAATTGGGTTTTCCGATTCCATAATCACCCGTTTTTTCCGGCCATTTTTCGGCGGGATTTTCTTCGATCCCGAATTGGAAACTTCCTCCCGATTATTTAATTTCATTTTCAAATGTCTCGCACTCGGCGAAAATACTCTTCCGGCCAACGGAATCGGCGCAATCCCTCAACAATTAGCAGCAAATCTCCCGCCGGAAACCATTTTGCTGAATTCCAGAGTCGTCTCCGTCGATTTCGAATCGAAATCGCCAATTGTGAAGTTACAGAGTGGGGAAATTATAGCCAGCGAAATGGGGGTGATCGTTGCGGTGGAGGAACCGGAGGCAGAGAGATTACTAGCCGGAAGACGAAAAATCGGCAGCCGGAAACCGCCTAGGAGTACGGTATGTTTGTATTTCGCGGCGGATCGGGACAGGATTCCGGTGAGGGAACCAGTGCTGTTTCTGAATGGATCGGGGAAGGGAATTGTTAACAATATGTTTTTCGCGACAAACGTGGCGCCGTCGTATGGACCGGCGGAGAAGGTGCTGGTGTCGGTATCGTTGATCGGGAAATTTGAGGATGTTGGAGATGAGGATCTGACGGCTGAGGTTATTCGGGAGATGTCGGATTGGTTTGGGGAATCAACGATTGAGGGATGGAAGCATTTACGGACGTATAGGATTGGTTTTGCACAGCCGAATCAATCTCCACCGTCGGATTTGATGAAAGATCCAACGGTGGAGAGTGGGCTGTACGTGTGTGGTGATTATTTGACTTCCGCCACGTTCGACGGCGCGTTGGTCTCCGGCAGGAAGGCCGTCGAAGCCTTAGTGAGAGAAAGGGCCGTCGCTTACGTATGA

Protein sequence

MSFSAVGTCLPCHSISYPRGSLVFKPPHASSSSLSLSPAPPAKTGVIVVGAGLAGLAAATHLRSKNIPFLLLEASDGVGGRVRTDFVDGFLLDRGFQIFITAYPEAQALLDYQSLRLQKFYSGALVYFDGQFHTVADPLRHFTDSLASLTNPIGSVIDKLLIGLTRARVLGKSDREIFTAGEASTMELLKEIGFSDSIITRFFRPFFGGIFFDPELETSSRLFNFIFKCLALGENTLPANGIGAIPQQLAANLPPETILLNSRVVSVDFESKSPIVKLQSGEIIASEMGVIVAVEEPEAERLLAGRRKIGSRKPPRSTVCLYFAADRDRIPVREPVLFLNGSGKGIVNNMFFATNVAPSYGPAEKVLVSVSLIGKFEDVGDEDLTAEVIREMSDWFGESTIEGWKHLRTYRIGFAQPNQSPPSDLMKDPTVESGLYVCGDYLTSATFDGALVSGRKAVEALVRERAVAYV

Homology

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BLAST of Cp4.1LG03g08440 vs. Swiss-Prot
Match: PDS_ONCHC (15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Oncidium hybrid cultivar GN=PDS PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.4e-08
Identity = 121/509 (23.77%), Postives = 198/509 (38.90%), Query Frame = 1


Query: 15  ISYPRGSLV----FKPPHASSSSLSLSPAPPAKTGVIVVGAGLAGLAAATHLRSKNIPFL 74
           + YPR  L     F      S+S   S  P     V++ GAGLAGL+ A +L       +
Sbjct: 78  MDYPRPELENTINFLEAAKLSASFRDSIRPKKPLEVVIAGAGLAGLSTAKYLADAGHKPI 137

Query: 75  LLEASDGVGGRVRT-DFVDGFLLDRGFQIFITAYPEAQALLDYQSL--RLQ-KFYS--GA 134
           LLEA D +GG++      DG   + G  IF  AYP  Q L     +  RLQ K +S   A
Sbjct: 138 LLEARDVLGGKIAAWKDKDGDFYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFA 197

Query: 135 LVYFDGQFHTVADPLRHFTDSLASLTNPIGSVID-----------KLLIGLTRARVLGKS 194
           +    G+F         F D L +  N I +++            K  IGL  A V G+S
Sbjct: 198 MPNKPGEFSRF-----DFPDVLPAPFNGIWAILRNNEMLTWSEKVKFAIGLLPAMVGGQS 257

Query: 195 DREIFTAGEASTMELLKEIGFSDSIITRFFRPFFGGI-FFDPELETSSRLFNFIFKCLAL 254
             E       +  E +K  G    +    F      + F +P+            +C+ +
Sbjct: 258 YVE--AQDSLTVKEWMKRQGVPVRVNDEVFIAMSKALNFINPD--------ELSMQCILI 317

Query: 255 GENTLPANGIGAIPQQLAANLPPETIL---------------LNSRVVSVDFESKSPIVK 314
             N       G+    L  N PPE +                LNSRV  ++  S   + K
Sbjct: 318 ALNRFLQEKHGSKIAFLDGN-PPERLCMPIVEHIRSLGGQVELNSRVQKIELNSDRTVKK 377

Query: 315 --LQSGEII-------ASEMGVIVAVEEPEAERLLAGRRKIGSRKPPRSTVCLYFAADRD 374
             L +G +I       A+ + ++  +   E + +   +R       P   V L+F  DR 
Sbjct: 378 FVLNNGSVITGDAYVFATPVDILKLLLPEEWKEISCFQRLNKLAGVPVINVHLWF--DRK 437

Query: 375 RIPVREPVLFLNGSGKGIVNNMFFATNVAPSYGPAEKVLVSV-SLIGKFEDVGDEDLTAE 434
                + +LF       +  +M  +      Y P   +L  V +   ++    D D+   
Sbjct: 438 LKNTYDHLLFSRSPLLSVYADM--SVTCKEYYDPNRSMLELVFAPADEWISRSDSDIVDA 497

Query: 435 VIREMSDWF--------GESTIEGWKHLRTYRIGF-AQPNQSPPSDLMKDPTVESGLYVC 465
            ++E++  F         ++ +  +  ++T R  +   PN  P   L + P    G Y+ 
Sbjct: 498 TLKELAKLFPNEIAADQSKAKLLKYHVVKTPRSVYKTVPNCEPCRPLQRTPI--KGFYLA 557

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BLAST of Cp4.1LG03g08440 vs. Swiss-Prot
Match: PPOCM_ARATH (Protoporphyrinogen oxidase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=PPOX2 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 7.6e-08
Identity = 49/174 (28.16%), Postives = 77/174 (44.25%), Query Frame = 1


Query: 46  VIVVGAGLAGLAAATHLRSKNIPFLLLEASDGVGGRVRTDFVDGFLLDRGFQIFITAYPE 105
           V VVGAG++GLAAA  L+S+ +   + EA   VGG++R+   +G + D G      A PE
Sbjct: 19  VAVVGAGVSGLAAAYKLKSRGLNVTVFEADGRVGGKLRSVMQNGLIWDEGANTMTEAEPE 78

Query: 106 AQALLDYQSLRLQKFYSGALVYFDGQFHTVADPLRHFTDSLASL---TNPIGSVIDKLLI 165
             +LLD   LR            + Q   ++   R+   +   +   TNPI  V   +L 
Sbjct: 79  VGSLLDDLGLR------------EKQQFPISQKKRYIVRNGVPVMLPTNPIELVTSSVLS 138

Query: 166 GLTRARVL-------GKSDREIFTAGEASTMELLKEIGFSDSIITRFFRPFFGG 210
             ++ ++L        KS +    + E S  E  +   F   ++     PF GG
Sbjct: 139 TQSKFQILLEPFLWKKKSSKVSDASAEESVSEFFQR-HFGQEVVDYLIDPFVGG 179

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BLAST of Cp4.1LG03g08440 vs. Swiss-Prot
Match: PPOX_MYXXA (Protoporphyrinogen oxidase OS=Myxococcus xanthus GN=hemY PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.2e-06
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 1


Query: 41  PAKTG--VIVVGAGLAGLAAATHLRSKNIPFLLLEASDGVGGRVRTDFVDGFLLDRGFQI 100
           P  TG  V VVG G++GLA A HLRS+    +LLE+S  +GG V T  + G+L+++G   
Sbjct: 5   PRTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNS 64

Query: 101 FITAYPEAQAL 110
           F+   P  +AL
Sbjct: 65  FLDREPATRAL 75

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BLAST of Cp4.1LG03g08440 vs. TrEMBL
Match: A0A0A0LCJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G822340 PE=4 SV=1)

HSP 1 Score: 770.4 bits (1988), Expect = 1.3e-219
Identity = 393/470 (83.62%), Postives = 424/470 (90.21%), Query Frame = 1


Query: 5   AVGTCLPCHSISYPRGSLVFKPPHASSSSLSLSPAPPAKTGVIVVGAGLAGLAAATHLRS 64
           A  T +  +SI   R   +FKP  +SS SLSLSP  P +T V+V+GAGLAGLAAATHLRS
Sbjct: 4   AAPTSMLSYSIHSHRRLHLFKPKSSSSISLSLSPPKPTQTSVVVIGAGLAGLAAATHLRS 63

Query: 65  KNIPFLLLEASDGVGGRVRTDFVDGFLLDRGFQIFITAYPEAQALLDYQSLRLQKFYSGA 124
           KNIPF+LLEASDGVGGRVRTD VDGFLLDRGFQIFITAYPEAQ+LL+YQSLRLQKFYSGA
Sbjct: 64  KNIPFILLEASDGVGGRVRTDLVDGFLLDRGFQIFITAYPEAQSLLNYQSLRLQKFYSGA 123

Query: 125 LVYFDGQFHTVADPLRHFTDSLASLTNPIGSVIDKLLIGLTRARVLGKSDREIFTAGEAS 184
           LVY D QFHTVADPLRHF DSL SL+NPIGSV+DKLLIGLTRARVL KSD EIFTA E S
Sbjct: 124 LVYHDRQFHTVADPLRHFIDSLGSLSNPIGSVLDKLLIGLTRARVLAKSDEEIFTADEVS 183

Query: 185 TMELLKEIGFSDSIITRFFRPFFGGIFFDPELETSSRLFNFIFKCLALGENTLPANGIGA 244
           T++LLK+IGFSDSII+RFFRPFFGGIFFD +LETSSRLFNFIFKCLALG NTLP +GIGA
Sbjct: 184 TIDLLKQIGFSDSIISRFFRPFFGGIFFDTQLETSSRLFNFIFKCLALGNNTLPVDGIGA 243

Query: 245 IPQQLAANLPPETILLNSRVVSVDFE----SKSPIVKLQSGEIIASEMGVIVAVEEPEAE 304
           IPQQLA+NLPPETILLNS+VVSVDF+    SKSPIVKLQSGEII SEMGVIVAVEEPEA 
Sbjct: 244 IPQQLASNLPPETILLNSKVVSVDFDDSSKSKSPIVKLQSGEIIRSEMGVIVAVEEPEAG 303

Query: 305 RLLAGRRKIGSRKPPRSTVCLYFAADRDRIPVREPVLFLNGSGKGIVNNMFFATNVAPSY 364
           RLLAGR+KIG+RKPPRSTVC+YF  DR+RIPV+EPVLFLNGSGKGIVNNMFFATNVAPSY
Sbjct: 304 RLLAGRKKIGNRKPPRSTVCVYFTTDRERIPVKEPVLFLNGSGKGIVNNMFFATNVAPSY 363

Query: 365 GPAEKVLVSVSLIGKFEDVGDEDLTAEVIREMSDWFGESTIEGWKHLRTYRIGFAQPNQS 424
           GP EK LVSVSLIGKFE V DEDLTAEVIREM DWFGEST+EGWKHLRTYRI FAQPNQS
Sbjct: 364 GPPEKALVSVSLIGKFEGVEDEDLTAEVIREMGDWFGESTVEGWKHLRTYRIEFAQPNQS 423

Query: 425 PPSDLMKDPTVESGLYVCGDYLTSATFDGALVSGRKAVEALVRERAVAYV 471
           PP D+MKDPTVE+GLYVCGDYLTSATFDGALV+GRKAVEALVR+RAV YV
Sbjct: 424 PPWDVMKDPTVENGLYVCGDYLTSATFDGALVAGRKAVEALVRDRAVIYV 473

[Close]

BLAST of Cp4.1LG03g08440 vs. TrEMBL
Match: B9RNM3_RICCO (Amine oxidase, putative OS=Ricinus communis GN=RCOM_0918760 PE=4 SV=1)

HSP 1 Score: 662.5 bits (1708), Expect = 3.7e-187
Identity = 332/472 (70.34%), Postives = 393/472 (83.26%), Query Frame = 1


Query: 1   MSFSAVGTCLPCHSISYPRG-SLVFKPPHASSSSLSLSPA---PPAKTGVIVVGAGLAGL 60
           + FSA   C    S+S P+  S+ FK   +S+  LS +P    P  KTGVIV+GAGLAGL
Sbjct: 9   LPFSA---CCSHVSLSSPKNFSIKFKLRASSTQQLSSNPTSSTPKQKTGVIVIGAGLAGL 68

Query: 61  AAATHLRSKNIPFLLLEASDGVGGRVRTDFVDGFLLDRGFQIFITAYPEAQALLDYQSLR 120
           AAAT L S+N+PF+LLEASDGVGGRVRTD VDGF+LDRGFQIFITAYPEAQ LLDYQ+L 
Sbjct: 69  AAATRLNSENVPFILLEASDGVGGRVRTDIVDGFILDRGFQIFITAYPEAQKLLDYQALD 128

Query: 121 LQKFYSGALVYFDGQFHTVADPLRHFTDSLASLTNPIGSVIDKLLIGLTRARVLGKSDRE 180
           LQ+FYSGA +YFDGQF+TVADPLRHF D++ SLTNPIGS++DKLLIG TR + L KSD E
Sbjct: 129 LQRFYSGAKIYFDGQFYTVADPLRHFWDAVESLTNPIGSILDKLLIGSTRLQALAKSDNE 188

Query: 181 IFTAGEASTMELLKEIGFSDSIITRFFRPFFGGIFFDPELETSSRLFNFIFKCLALGENT 240
           IF+A E +T++LLK IGFSDSI++RFFRPFFGGIFFD EL+T+SRLFNFIFKCLALG+NT
Sbjct: 189 IFSASEVTTIDLLKNIGFSDSIVSRFFRPFFGGIFFDSELQTTSRLFNFIFKCLALGDNT 248

Query: 241 LPANGIGAIPQQLAANLPPETILLNSRVVSVDFESKSPIVKLQSGEIIASEMGVIVAVEE 300
           LPA GIGAIP QLAA LPP ++ L++RV S+D E  +P V LQSGEI+ SEMGVI+AVEE
Sbjct: 249 LPAKGIGAIPNQLAAKLPPNSVFLDTRVASIDIERANPSVTLQSGEIVQSEMGVILAVEE 308

Query: 301 PEAERLLAGRRKIG--SRKPPRSTVCLYFAADRDRIPVREPVLFLNGSGKGIVNNMFFAT 360
           PE ++L AGR  I    +KP RSTVC+YF+ADRD++PV++P LFLNGSGKGI+NNMFFAT
Sbjct: 309 PEVDKLFAGRNDIKPVQKKPYRSTVCVYFSADRDKVPVQDPALFLNGSGKGIINNMFFAT 368

Query: 361 NVAPSYGPAEKVLVSVSLIGKFEDVGDEDLTAEVIREMSDWFGESTIEGWKHLRTYRIGF 420
           NVAPSYGP +K LVSVSLIG FEDV D+DLT E++ E+S WFG S ++ WK+LRTYRIGF
Sbjct: 369 NVAPSYGPPDKALVSVSLIGLFEDVSDDDLTVEIVGELSGWFGSSIVKSWKYLRTYRIGF 428

Query: 421 AQPNQSPPSDLMKDPTVESGLYVCGDYLTSATFDGALVSGRKAVEALVRERA 467
           AQPNQ PP+DLMK   V SGLY+CGDY+TSATFDGALVSGRKAVEAL+ +RA
Sbjct: 429 AQPNQCPPTDLMKTSRVGSGLYLCGDYMTSATFDGALVSGRKAVEALLGDRA 477

[Close]

BLAST of Cp4.1LG03g08440 vs. TrEMBL
Match: A0A061E2J9_THECC (FAD/NAD(P)-binding oxidoreductase family protein OS=Theobroma cacao GN=TCM_007540 PE=4 SV=1)

HSP 1 Score: 659.8 bits (1701), Expect = 2.4e-186
Identity = 334/449 (74.39%), Postives = 383/449 (85.30%), Query Frame = 1


Query: 24  FKPPHASSSSLSLSPAPPAKTG-VIVVGAGLAGLAAATHLRSKNIPFLLLEASDGVGGRV 83
           F  PHAS+  L+  P P  KT  VIV+GAGLAGLAAA  L S+NIPFLLLEASDGVGGRV
Sbjct: 27  FSIPHASTQ-LAPKPPPVLKTAPVIVIGAGLAGLAAAIRLNSENIPFLLLEASDGVGGRV 86

Query: 84  RTDFVDGFLLDRGFQIFITAYPEAQALLDYQSLRLQKFYSGALVYFDGQFHTVADPLRHF 143
           RTD VDGFLLDRGFQIFITAYPEAQ LL+Y  L LQKFYSGA +Y+DGQFHTVADPLRHF
Sbjct: 87  RTDVVDGFLLDRGFQIFITAYPEAQKLLNYNELNLQKFYSGARIYYDGQFHTVADPLRHF 146

Query: 144 TDSLASLTNPIGSVIDKLLIGLTRARVLGKSDREIFTAGEASTMELLKEIGFSDSIITRF 203
           +DSL SL NPIGSVIDKLLI LTRARVL KS  EI TA E ST+ELLK IGFSDS+I RF
Sbjct: 147 SDSLLSLANPIGSVIDKLLIALTRARVLSKSYEEILTATEVSTIELLKNIGFSDSMIERF 206

Query: 204 FRPFFGGIFFDPELETSSRLFNFIFKCLALGENTLPANGIGAIPQQLAANLPPETILLNS 263
           FRPFFGGIFFD ELET+SRLF+F+FKCLALG+NTLPA GIG IP QLAA LPP+++LL +
Sbjct: 207 FRPFFGGIFFDRELETTSRLFDFVFKCLALGDNTLPAKGIGEIPNQLAAKLPPDSVLLTA 266

Query: 264 RVVSVDFE-SKSPIVKLQSGEIIASEMGVIVAVEEPEAERLLAGRRKIGSRKPPRSTVCL 323
           +VVSVD E S SP V+L+SGEI+ SE+GVI+AVEEP  +++LAGR++   RKP RSTVCL
Sbjct: 267 KVVSVDLEGSNSPSVRLESGEILKSELGVIMAVEEPALDKILAGRKQPAKRKPARSTVCL 326

Query: 324 YFAADRDRIPVREPVLFLNGSGKGIVNNMFFATNVAPSYGPAEKVLVSVSLIGKFEDVGD 383
           YF+AD+D+IPV +PVLFLNGSG+GI+NNMFFATNVAPSY P  K LVSVSLIG FEDV D
Sbjct: 327 YFSADQDQIPVGDPVLFLNGSGEGIINNMFFATNVAPSYSPPNKALVSVSLIGLFEDVCD 386

Query: 384 EDLTAEVIREMSDWFGESTIEGWKHLRTYRIGFAQPNQSPPSDLMKDPTVESGLYVCGDY 443
           +DLTAEV  E+S WFG S +  W+HLRTYRIGFAQPNQSPP+DLMK P++  GLY+CGDY
Sbjct: 387 DDLTAEVTGELSGWFGASMVGSWRHLRTYRIGFAQPNQSPPTDLMKGPSIAPGLYLCGDY 446

Query: 444 LTSATFDGALVSGRKAVEALVRERAVAYV 471
           +TSATFDGALVSGR+AVEAL+++RA+A V
Sbjct: 447 ITSATFDGALVSGRRAVEALLKDRALARV 474

[Close]

BLAST of Cp4.1LG03g08440 vs. TrEMBL
Match: A0A0R0K195_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G120300 PE=4 SV=1)

HSP 1 Score: 650.6 bits (1677), Expect = 1.5e-183
Identity = 328/439 (74.72%), Postives = 372/439 (84.74%), Query Frame = 1


Query: 30  SSSSLSLSPAPPAKTGVIVVGAGLAGLAAATHLRSKNIPFLLLEASDGVGGRVRTDFVDG 89
           SSSS   SP  P  TGVIV+GAGLAGLAAATHL S+NIPFLLLEASD VGGRVRTD VDG
Sbjct: 35  SSSSPLQSPPLPKTTGVIVIGAGLAGLAAATHLNSQNIPFLLLEASDAVGGRVRTDIVDG 94

Query: 90  FLLDRGFQIFITAYPEAQALLDYQSLRLQKFYSGALVYFDGQFHTVADPLRHFTDSLASL 149
           FLLDRGFQIFITAYPEAQ LL+YQSL LQKFYSGA +++DGQFHTVADPLRHF DS  SL
Sbjct: 95  FLLDRGFQIFITAYPEAQKLLNYQSLNLQKFYSGARIFYDGQFHTVADPLRHFWDSARSL 154

Query: 150 TNPIGSVIDKLLIGLTRARVLGKSDREIFTAGEASTMELLKEIGFSDSIITRFFRPFFGG 209
           TNPIGS +DKLLIG TR R L KSD EI TA E  T+ELLK++GFSDSII RFFRPFFGG
Sbjct: 155 TNPIGSPLDKLLIGSTRIRALVKSDEEILTAEEVPTIELLKKLGFSDSIIRRFFRPFFGG 214

Query: 210 IFFDPELETSSRLFNFIFKCLALGENTLPANGIGAIPQQLAANLPPETILLNSRVVSVDF 269
           IFFDP+LET+SRLFNFIFKCLALG+NTLPA GI AIP+QLAA LP  +ILLNS+ VSVD 
Sbjct: 215 IFFDPDLETTSRLFNFIFKCLALGDNTLPARGISAIPEQLAARLPSGSILLNSKAVSVDL 274

Query: 270 E-SKSPIVKLQSGEIIASEMGVIVAVEEPEAERLLAGRRKIGSRKPPRSTVCLYFAADRD 329
           + S SP+V+LQ+G+++ SE+GVIVAVEEP A  LL+GR     +KP RSTVCLYF A+RD
Sbjct: 275 DNSDSPLVRLQNGDVLKSELGVIVAVEEPAAVHLLSGRTGPVPKKPVRSTVCLYFTANRD 334

Query: 330 RIPVREPVLFLNGSGKGIVNNMFFATNVAPSYGPAEKVLVSVSLIGKFEDVGDEDLTAEV 389
           +IPV +PVLFLNGSGKGIVNNMFF TNVAPS+GP +K LVSVSLIG FE V DE+L  +V
Sbjct: 335 QIPVPDPVLFLNGSGKGIVNNMFFVTNVAPSFGPPDKGLVSVSLIGLFEGVSDEELVGKV 394

Query: 390 IREMSDWFGESTIEGWKHLRTYRIGFAQPNQSPPSDLMKDPTVESGLYVCGDYLTSATFD 449
           + E+S WFGE  +  W HLRTYRIGFAQPNQ PP+DL KDP VESGLYVCGD+LTSATFD
Sbjct: 395 VNELSGWFGEKMVSKWNHLRTYRIGFAQPNQCPPTDLKKDPRVESGLYVCGDHLTSATFD 454

Query: 450 GALVSGRKAVEALVRERAV 468
           GALVSGR+A E+L+++RA+
Sbjct: 455 GALVSGRRAAESLLKDRAL 473

[Close]

BLAST of Cp4.1LG03g08440 vs. TrEMBL
Match: V7CQ56_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G206500g PE=4 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 4.3e-183
Identity = 333/466 (71.46%), Postives = 386/466 (82.83%), Query Frame = 1


Query: 10  LPCHSISY---PRGSLVFKPPHAS-----SSSLSLSPAPPAKTGVIVVGAGLAGLAAATH 69
           +PC ++S+   P     F P  ++     SSS   +P+ P KTGVIV+GAGLAGLAAATH
Sbjct: 9   VPCTNLSFFSSPPKRFRFNPQSSAQLSPTSSSPLQNPSLP-KTGVIVIGAGLAGLAAATH 68

Query: 70  LRSKNIPFLLLEASDGVGGRVRTDFVDGFLLDRGFQIFITAYPEAQALLDYQSLRLQKFY 129
           L S NIPFLLLEASD VGGRVRTD VDGFLLDRGFQIFITAYPEAQ LL+YQSL LQKFY
Sbjct: 69  LNSNNIPFLLLEASDAVGGRVRTDIVDGFLLDRGFQIFITAYPEAQKLLNYQSLNLQKFY 128

Query: 130 SGALVYFDGQFHTVADPLRHFTDSLASLTNPIGSVIDKLLIGLTRARVLGKSDREIFTAG 189
           SGA +++DGQFHTVADPLRHF DS+ SLTNPIGS +DKLLIG TR RVL KSD EI  A 
Sbjct: 129 SGARIFYDGQFHTVADPLRHFWDSVKSLTNPIGSPLDKLLIGSTRIRVLSKSDEEILAAE 188

Query: 190 EASTMELLKEIGFSDSIITRFFRPFFGGIFFDPELETSSRLFNFIFKCLALGENTLPANG 249
           E  T+ LLK++GFSDSII  FFRPFFGGIFFDP+LET+SRLF+F+FKCLALGENTLPA G
Sbjct: 189 EVPTIALLKKLGFSDSIIGSFFRPFFGGIFFDPDLETTSRLFDFVFKCLALGENTLPARG 248

Query: 250 IGAIPQQLAANLPPETILLNSRVVSVDFE-SKSPIVKLQSGEIIASEMGVIVAVEEPEAE 309
           I AIP+QLAA LP  +ILLNSRVVSVD + S++P+V+LQ+G+++ SE+GVIVAVEEP A 
Sbjct: 249 ISAIPEQLAARLPSGSILLNSRVVSVDLDGSETPLVRLQNGDVLKSELGVIVAVEEPAAV 308

Query: 310 RLLAGRRKIGSRKPPRSTVCLYFAADRDRIPVREPVLFLNGSGKGIVNNMFFATNVAPSY 369
            LLA R     +KP RSTVCLYF A+RD+IPV++PVLFLNGSGKGIVNNMFFATNVAPSY
Sbjct: 309 ELLARRTSTVPKKPVRSTVCLYFTANRDQIPVQDPVLFLNGSGKGIVNNMFFATNVAPSY 368

Query: 370 GPAEKVLVSVSLIGKFEDVGDEDLTAEVIREMSDWFGESTIEGWKHLRTYRIGFAQPNQS 429
           GP++K LVSVSLIG FE V D++L  +VI E+S WFG   +  WKHLRTYRIGFAQPNQ 
Sbjct: 369 GPSDKALVSVSLIGVFEGVSDDELVGKVIEELSGWFGGKIVGEWKHLRTYRIGFAQPNQC 428

Query: 430 PPSDLMKDPTVESGLYVCGDYLTSATFDGALVSGRKAVEALVRERA 467
           PP+DL K+P VESGLYVCGDYLTSATFDGALVSGR+A E+L+++RA
Sbjct: 429 PPTDLKKNPRVESGLYVCGDYLTSATFDGALVSGRRASESLLKDRA 473

[Close]

BLAST of Cp4.1LG03g08440 vs. TAIR10
Match: AT3G09580.1 (AT3G09580.1 FAD/NAD(P)-binding oxidoreductase family protein)

HSP 1 Score: 587.0 bits (1512), Expect = 1.0e-167
Identity = 292/427 (68.38%), Postives = 353/427 (82.67%), Query Frame = 1


Query: 43  KTGVIVVGAGLAGLAAATHLRSKNIPFLLLEASDGVGGRVRTDFVDGFLLDRGFQIFITA 102
           +TGVI++GAGLAGLAAA  L SK IPFLLLEASDGVGGRVRTD VDGF LDRGFQIFITA
Sbjct: 46  QTGVIIIGAGLAGLAAANQLTSKRIPFLLLEASDGVGGRVRTDIVDGFFLDRGFQIFITA 105

Query: 103 YPEAQALLDYQSLRLQKFYSGALVYFDGQFHTVADPLRHFTDSLASLTNPIGSVIDKLLI 162
           YPEA+ LLDY++L LQ+FY+GA V++ G+FHTVADPLRHF DS+ASL NPIGSV+DK LI
Sbjct: 106 YPEAKKLLDYEALDLQRFYAGAKVFYGGKFHTVADPLRHFWDSVASLANPIGSVVDKGLI 165

Query: 163 GLTRARVLGKSDREIFTAG-EASTMELLKEIGFSDSIITRFFRPFFGGIFFDPELETSSR 222
            LTRARVL KSD EI TA  E  T++LL++IGFS++I+ RFFRPFFGGIFFD +LET+S+
Sbjct: 166 ALTRARVLIKSDEEILTAADEVPTIDLLRKIGFSETILDRFFRPFFGGIFFDRDLETTSK 225

Query: 223 LFNFIFKCLALGENTLPANGIGAIPQQLAANLPPETILLNSRVVSVDFESKS----PIVK 282
           LF+F+F+CLALGENTLPA GIG I  QLAA LP +++LLN+RV S+++ + S    P V+
Sbjct: 226 LFDFVFRCLALGENTLPAMGIGEISNQLAAKLPAKSVLLNTRVASIEYPNGSGSDPPSVR 285

Query: 283 LQSGEIIASEMGVIVAVEEPEAERLLAGRRKIGSRKPPRSTVCLYFAADRDRIPVREPVL 342
           LQ G ++ +E+GVI+AVE+PE  +LL G R     KP RST+CLYF A+ ++IPV++PVL
Sbjct: 286 LQDGSVMKAELGVIIAVEQPEVNKLLDGIRDPVITKPARSTICLYFTAEPNQIPVQDPVL 345

Query: 343 FLNGSGKGIVNNMFFATNVAPSYGPAEKVLVSVSLIGKFEDVGDEDLTAEVIREMSDWFG 402
           FLNGS  GI+NNMFFATNVA +Y P  K LVSVSLIG FED  D+DL AEV+RE+S WFG
Sbjct: 346 FLNGSNSGIINNMFFATNVARTYAPPGKALVSVSLIGLFEDRTDDDLAAEVLRELSGWFG 405

Query: 403 ESTIEGWKHLRTYRIGFAQPNQSPPSDLMKDPTVESGLYVCGDYLTSATFDGALVSGRKA 462
           ES +  WKHL+TYRI FAQPNQ PP+DL+K P V SGLY+ GDY+TSATFDGALVSGR+A
Sbjct: 406 ESPVMSWKHLKTYRIQFAQPNQCPPTDLVKSPRVGSGLYLSGDYMTSATFDGALVSGRRA 465

Query: 463 VEALVRE 465
           VE L+RE
Sbjct: 466 VEVLLRE 472

[Close]

BLAST of Cp4.1LG03g08440 vs. TAIR10
Match: AT5G14220.1 (AT5G14220.1 Flavin containing amine oxidoreductase family)

HSP 1 Score: 60.1 bits (144), Expect = 4.3e-09
Identity = 49/174 (28.16%), Postives = 77/174 (44.25%), Query Frame = 1


Query: 46  VIVVGAGLAGLAAATHLRSKNIPFLLLEASDGVGGRVRTDFVDGFLLDRGFQIFITAYPE 105
           V VVGAG++GLAAA  L+S+ +   + EA   VGG++R+   +G + D G      A PE
Sbjct: 19  VAVVGAGVSGLAAAYKLKSRGLNVTVFEADGRVGGKLRSVMQNGLIWDEGANTMTEAEPE 78

Query: 106 AQALLDYQSLRLQKFYSGALVYFDGQFHTVADPLRHFTDSLASL---TNPIGSVIDKLLI 165
             +LLD   LR            + Q   ++   R+   +   +   TNPI  V   +L 
Sbjct: 79  VGSLLDDLGLR------------EKQQFPISQKKRYIVRNGVPVMLPTNPIELVTSSVLS 138

Query: 166 GLTRARVL-------GKSDREIFTAGEASTMELLKEIGFSDSIITRFFRPFFGG 210
             ++ ++L        KS +    + E S  E  +   F   ++     PF GG
Sbjct: 139 TQSKFQILLEPFLWKKKSSKVSDASAEESVSEFFQR-HFGQEVVDYLIDPFVGG 179

[Close]

BLAST of Cp4.1LG03g08440 vs. TAIR10
Match: AT4G14210.1 (AT4G14210.1 phytoene desaturase 3)

HSP 1 Score: 51.6 bits (122), Expect = 1.5e-06
Identity = 32/80 (40.00%), Postives = 42/80 (52.50%), Query Frame = 1


Query: 31  SSSLSLSPAPPAKTGVIVVGAGLAGLAAATHLRSKNIPFLLLEASDGVGGRVRT-DFVDG 90
           S+S   +P P     V++ GAGLAGL+ A +L       LLLEA D +GG++      DG
Sbjct: 80  SASFRSAPRPAKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDEDG 139

Query: 91  FLLDRGFQIFITAYPEAQAL 110
              + G  IF  AYP  Q L
Sbjct: 140 DWYETGLHIFFGAYPNVQNL 159

[Close]

BLAST of Cp4.1LG03g08440 vs. TAIR10
Match: AT3G59050.1 (AT3G59050.1 polyamine oxidase 3)

HSP 1 Score: 50.1 bits (118), Expect = 4.4e-06
Identity = 23/50 (46.00%), Postives = 35/50 (70.00%), Query Frame = 1


Query: 46 VIVVGAGLAGLAAATHLRSKNIPFLLLEASDGVGGRVRTDFVDGFLLDRG 96
          VIV+G G+AG++AA  L+  +   ++LE+ D +GGRV TD+  GF +D G
Sbjct: 31 VIVIGGGMAGISAARTLQDASFQVVVLESRDRIGGRVHTDYSFGFPVDLG 80

[Close]

BLAST of Cp4.1LG03g08440 vs. NCBI nr
Match: gi|659085207|ref|XP_008443300.1| (PREDICTED: 15-cis-phytoene desaturase, chloroplastic/chromoplastic [Cucumis melo])

HSP 1 Score: 771.5 bits (1991), Expect = 8.2e-220
Identity = 394/470 (83.83%), Postives = 424/470 (90.21%), Query Frame = 1


Query: 5   AVGTCLPCHSISYPRGSLVFKPPHASSSSLSLSPAPPAKTGVIVVGAGLAGLAAATHLRS 64
           AV T +   SI   R   +FKP  + S SLSLSP  P +T V+++GAGLAGLAAATHLRS
Sbjct: 31  AVATSMLSSSIHSHRRLHLFKPRSSFSISLSLSPPKPTQTSVVIIGAGLAGLAAATHLRS 90

Query: 65  KNIPFLLLEASDGVGGRVRTDFVDGFLLDRGFQIFITAYPEAQALLDYQSLRLQKFYSGA 124
           KNIPFLLLEASDGVGGRVRTD VDGFLLDRGFQIFITAYPEAQ+LL+YQSLRLQKFYSGA
Sbjct: 91  KNIPFLLLEASDGVGGRVRTDLVDGFLLDRGFQIFITAYPEAQSLLNYQSLRLQKFYSGA 150

Query: 125 LVYFDGQFHTVADPLRHFTDSLASLTNPIGSVIDKLLIGLTRARVLGKSDREIFTAGEAS 184
            VY+D QFHTVADPLRHF DSL SL+NPIGSV DKLLIGLTRARVL K+D EIFTA EAS
Sbjct: 151 FVYYDRQFHTVADPLRHFIDSLGSLSNPIGSVFDKLLIGLTRARVLAKADEEIFTADEAS 210

Query: 185 TMELLKEIGFSDSIITRFFRPFFGGIFFDPELETSSRLFNFIFKCLALGENTLPANGIGA 244
           T++ L++IGFSDSII+RFFRPFFGGIFFD +LETSSRLFNFIFKCLALG+NTLPA+GI A
Sbjct: 211 TIDFLQQIGFSDSIISRFFRPFFGGIFFDTQLETSSRLFNFIFKCLALGDNTLPADGISA 270

Query: 245 IPQQLAANLPPETILLNSRVVSVDFE----SKSPIVKLQSGEIIASEMGVIVAVEEPEAE 304
           IPQQLA NLPPETILLNS+VVSVDF+    SKSPIVKLQSGEII SEMGVIVAVEEPEAE
Sbjct: 271 IPQQLAFNLPPETILLNSKVVSVDFDDSSKSKSPIVKLQSGEIIRSEMGVIVAVEEPEAE 330

Query: 305 RLLAGRRKIGSRKPPRSTVCLYFAADRDRIPVREPVLFLNGSGKGIVNNMFFATNVAPSY 364
           RLLAGRRKIG+RKPPRSTVC+YF ADRDRIPV+EPVLFLNGSGKGIVNNMFFATNVAPSY
Sbjct: 331 RLLAGRRKIGNRKPPRSTVCVYFTADRDRIPVKEPVLFLNGSGKGIVNNMFFATNVAPSY 390

Query: 365 GPAEKVLVSVSLIGKFEDVGDEDLTAEVIREMSDWFGESTIEGWKHLRTYRIGFAQPNQS 424
           GP +K LVSVSLIGKFE V DEDLTAEVIREM DWFGEST+EGWKHLRTYRI FAQPNQS
Sbjct: 391 GPPDKALVSVSLIGKFEGVEDEDLTAEVIREMGDWFGESTVEGWKHLRTYRIEFAQPNQS 450

Query: 425 PPSDLMKDPTVESGLYVCGDYLTSATFDGALVSGRKAVEALVRERAVAYV 471
           PP DLMKDPTVE+GLYVCGDYLTSATFDGALV+GRKAVEALVR+RAV YV
Sbjct: 451 PPWDLMKDPTVENGLYVCGDYLTSATFDGALVAGRKAVEALVRDRAVIYV 500

[Close]

BLAST of Cp4.1LG03g08440 vs. NCBI nr
Match: gi|449437759|ref|XP_004136658.1| (PREDICTED: 15-cis-phytoene desaturase, chloroplastic/chromoplastic [Cucumis sativus])

HSP 1 Score: 770.4 bits (1988), Expect = 1.8e-219
Identity = 393/470 (83.62%), Postives = 424/470 (90.21%), Query Frame = 1


Query: 5   AVGTCLPCHSISYPRGSLVFKPPHASSSSLSLSPAPPAKTGVIVVGAGLAGLAAATHLRS 64
           A  T +  +SI   R   +FKP  +SS SLSLSP  P +T V+V+GAGLAGLAAATHLRS
Sbjct: 4   AAPTSMLSYSIHSHRRLHLFKPKSSSSISLSLSPPKPTQTSVVVIGAGLAGLAAATHLRS 63

Query: 65  KNIPFLLLEASDGVGGRVRTDFVDGFLLDRGFQIFITAYPEAQALLDYQSLRLQKFYSGA 124
           KNIPF+LLEASDGVGGRVRTD VDGFLLDRGFQIFITAYPEAQ+LL+YQSLRLQKFYSGA
Sbjct: 64  KNIPFILLEASDGVGGRVRTDLVDGFLLDRGFQIFITAYPEAQSLLNYQSLRLQKFYSGA 123

Query: 125 LVYFDGQFHTVADPLRHFTDSLASLTNPIGSVIDKLLIGLTRARVLGKSDREIFTAGEAS 184
           LVY D QFHTVADPLRHF DSL SL+NPIGSV+DKLLIGLTRARVL KSD EIFTA E S
Sbjct: 124 LVYHDRQFHTVADPLRHFIDSLGSLSNPIGSVLDKLLIGLTRARVLAKSDEEIFTADEVS 183

Query: 185 TMELLKEIGFSDSIITRFFRPFFGGIFFDPELETSSRLFNFIFKCLALGENTLPANGIGA 244
           T++LLK+IGFSDSII+RFFRPFFGGIFFD +LETSSRLFNFIFKCLALG NTLP +GIGA
Sbjct: 184 TIDLLKQIGFSDSIISRFFRPFFGGIFFDTQLETSSRLFNFIFKCLALGNNTLPVDGIGA 243

Query: 245 IPQQLAANLPPETILLNSRVVSVDFE----SKSPIVKLQSGEIIASEMGVIVAVEEPEAE 304
           IPQQLA+NLPPETILLNS+VVSVDF+    SKSPIVKLQSGEII SEMGVIVAVEEPEA 
Sbjct: 244 IPQQLASNLPPETILLNSKVVSVDFDDSSKSKSPIVKLQSGEIIRSEMGVIVAVEEPEAG 303

Query: 305 RLLAGRRKIGSRKPPRSTVCLYFAADRDRIPVREPVLFLNGSGKGIVNNMFFATNVAPSY 364
           RLLAGR+KIG+RKPPRSTVC+YF  DR+RIPV+EPVLFLNGSGKGIVNNMFFATNVAPSY
Sbjct: 304 RLLAGRKKIGNRKPPRSTVCVYFTTDRERIPVKEPVLFLNGSGKGIVNNMFFATNVAPSY 363

Query: 365 GPAEKVLVSVSLIGKFEDVGDEDLTAEVIREMSDWFGESTIEGWKHLRTYRIGFAQPNQS 424
           GP EK LVSVSLIGKFE V DEDLTAEVIREM DWFGEST+EGWKHLRTYRI FAQPNQS
Sbjct: 364 GPPEKALVSVSLIGKFEGVEDEDLTAEVIREMGDWFGESTVEGWKHLRTYRIEFAQPNQS 423

Query: 425 PPSDLMKDPTVESGLYVCGDYLTSATFDGALVSGRKAVEALVRERAVAYV 471
           PP D+MKDPTVE+GLYVCGDYLTSATFDGALV+GRKAVEALVR+RAV YV
Sbjct: 424 PPWDVMKDPTVENGLYVCGDYLTSATFDGALVAGRKAVEALVRDRAVIYV 473

[Close]

BLAST of Cp4.1LG03g08440 vs. NCBI nr
Match: gi|255548572|ref|XP_002515342.1| (PREDICTED: 15-cis-phytoene desaturase, chloroplastic/chromoplastic [Ricinus communis])

HSP 1 Score: 662.5 bits (1708), Expect = 5.4e-187
Identity = 332/472 (70.34%), Postives = 393/472 (83.26%), Query Frame = 1


Query: 1   MSFSAVGTCLPCHSISYPRG-SLVFKPPHASSSSLSLSPA---PPAKTGVIVVGAGLAGL 60
           + FSA   C    S+S P+  S+ FK   +S+  LS +P    P  KTGVIV+GAGLAGL
Sbjct: 9   LPFSA---CCSHVSLSSPKNFSIKFKLRASSTQQLSSNPTSSTPKQKTGVIVIGAGLAGL 68

Query: 61  AAATHLRSKNIPFLLLEASDGVGGRVRTDFVDGFLLDRGFQIFITAYPEAQALLDYQSLR 120
           AAAT L S+N+PF+LLEASDGVGGRVRTD VDGF+LDRGFQIFITAYPEAQ LLDYQ+L 
Sbjct: 69  AAATRLNSENVPFILLEASDGVGGRVRTDIVDGFILDRGFQIFITAYPEAQKLLDYQALD 128

Query: 121 LQKFYSGALVYFDGQFHTVADPLRHFTDSLASLTNPIGSVIDKLLIGLTRARVLGKSDRE 180
           LQ+FYSGA +YFDGQF+TVADPLRHF D++ SLTNPIGS++DKLLIG TR + L KSD E
Sbjct: 129 LQRFYSGAKIYFDGQFYTVADPLRHFWDAVESLTNPIGSILDKLLIGSTRLQALAKSDNE 188

Query: 181 IFTAGEASTMELLKEIGFSDSIITRFFRPFFGGIFFDPELETSSRLFNFIFKCLALGENT 240
           IF+A E +T++LLK IGFSDSI++RFFRPFFGGIFFD EL+T+SRLFNFIFKCLALG+NT
Sbjct: 189 IFSASEVTTIDLLKNIGFSDSIVSRFFRPFFGGIFFDSELQTTSRLFNFIFKCLALGDNT 248

Query: 241 LPANGIGAIPQQLAANLPPETILLNSRVVSVDFESKSPIVKLQSGEIIASEMGVIVAVEE 300
           LPA GIGAIP QLAA LPP ++ L++RV S+D E  +P V LQSGEI+ SEMGVI+AVEE
Sbjct: 249 LPAKGIGAIPNQLAAKLPPNSVFLDTRVASIDIERANPSVTLQSGEIVQSEMGVILAVEE 308

Query: 301 PEAERLLAGRRKIG--SRKPPRSTVCLYFAADRDRIPVREPVLFLNGSGKGIVNNMFFAT 360
           PE ++L AGR  I    +KP RSTVC+YF+ADRD++PV++P LFLNGSGKGI+NNMFFAT
Sbjct: 309 PEVDKLFAGRNDIKPVQKKPYRSTVCVYFSADRDKVPVQDPALFLNGSGKGIINNMFFAT 368

Query: 361 NVAPSYGPAEKVLVSVSLIGKFEDVGDEDLTAEVIREMSDWFGESTIEGWKHLRTYRIGF 420
           NVAPSYGP +K LVSVSLIG FEDV D+DLT E++ E+S WFG S ++ WK+LRTYRIGF
Sbjct: 369 NVAPSYGPPDKALVSVSLIGLFEDVSDDDLTVEIVGELSGWFGSSIVKSWKYLRTYRIGF 428

Query: 421 AQPNQSPPSDLMKDPTVESGLYVCGDYLTSATFDGALVSGRKAVEALVRERA 467
           AQPNQ PP+DLMK   V SGLY+CGDY+TSATFDGALVSGRKAVEAL+ +RA
Sbjct: 429 AQPNQCPPTDLMKTSRVGSGLYLCGDYMTSATFDGALVSGRKAVEALLGDRA 477

[Close]

BLAST of Cp4.1LG03g08440 vs. NCBI nr
Match: gi|590688729|ref|XP_007043031.1| (FAD/NAD(P)-binding oxidoreductase family protein [Theobroma cacao])

HSP 1 Score: 659.8 bits (1701), Expect = 3.5e-186
Identity = 334/449 (74.39%), Postives = 383/449 (85.30%), Query Frame = 1


Query: 24  FKPPHASSSSLSLSPAPPAKTG-VIVVGAGLAGLAAATHLRSKNIPFLLLEASDGVGGRV 83
           F  PHAS+  L+  P P  KT  VIV+GAGLAGLAAA  L S+NIPFLLLEASDGVGGRV
Sbjct: 27  FSIPHASTQ-LAPKPPPVLKTAPVIVIGAGLAGLAAAIRLNSENIPFLLLEASDGVGGRV 86

Query: 84  RTDFVDGFLLDRGFQIFITAYPEAQALLDYQSLRLQKFYSGALVYFDGQFHTVADPLRHF 143
           RTD VDGFLLDRGFQIFITAYPEAQ LL+Y  L LQKFYSGA +Y+DGQFHTVADPLRHF
Sbjct: 87  RTDVVDGFLLDRGFQIFITAYPEAQKLLNYNELNLQKFYSGARIYYDGQFHTVADPLRHF 146

Query: 144 TDSLASLTNPIGSVIDKLLIGLTRARVLGKSDREIFTAGEASTMELLKEIGFSDSIITRF 203
           +DSL SL NPIGSVIDKLLI LTRARVL KS  EI TA E ST+ELLK IGFSDS+I RF
Sbjct: 147 SDSLLSLANPIGSVIDKLLIALTRARVLSKSYEEILTATEVSTIELLKNIGFSDSMIERF 206

Query: 204 FRPFFGGIFFDPELETSSRLFNFIFKCLALGENTLPANGIGAIPQQLAANLPPETILLNS 263
           FRPFFGGIFFD ELET+SRLF+F+FKCLALG+NTLPA GIG IP QLAA LPP+++LL +
Sbjct: 207 FRPFFGGIFFDRELETTSRLFDFVFKCLALGDNTLPAKGIGEIPNQLAAKLPPDSVLLTA 266

Query: 264 RVVSVDFE-SKSPIVKLQSGEIIASEMGVIVAVEEPEAERLLAGRRKIGSRKPPRSTVCL 323
           +VVSVD E S SP V+L+SGEI+ SE+GVI+AVEEP  +++LAGR++   RKP RSTVCL
Sbjct: 267 KVVSVDLEGSNSPSVRLESGEILKSELGVIMAVEEPALDKILAGRKQPAKRKPARSTVCL 326

Query: 324 YFAADRDRIPVREPVLFLNGSGKGIVNNMFFATNVAPSYGPAEKVLVSVSLIGKFEDVGD 383
           YF+AD+D+IPV +PVLFLNGSG+GI+NNMFFATNVAPSY P  K LVSVSLIG FEDV D
Sbjct: 327 YFSADQDQIPVGDPVLFLNGSGEGIINNMFFATNVAPSYSPPNKALVSVSLIGLFEDVCD 386

Query: 384 EDLTAEVIREMSDWFGESTIEGWKHLRTYRIGFAQPNQSPPSDLMKDPTVESGLYVCGDY 443
           +DLTAEV  E+S WFG S +  W+HLRTYRIGFAQPNQSPP+DLMK P++  GLY+CGDY
Sbjct: 387 DDLTAEVTGELSGWFGASMVGSWRHLRTYRIGFAQPNQSPPTDLMKGPSIAPGLYLCGDY 446

Query: 444 LTSATFDGALVSGRKAVEALVRERAVAYV 471
           +TSATFDGALVSGR+AVEAL+++RA+A V
Sbjct: 447 ITSATFDGALVSGRRAVEALLKDRALARV 474

[Close]

BLAST of Cp4.1LG03g08440 vs. NCBI nr
Match: gi|356512089|ref|XP_003524753.1| (PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic [Glycine max])

HSP 1 Score: 650.6 bits (1677), Expect = 2.1e-183
Identity = 328/439 (74.72%), Postives = 372/439 (84.74%), Query Frame = 1


Query: 30  SSSSLSLSPAPPAKTGVIVVGAGLAGLAAATHLRSKNIPFLLLEASDGVGGRVRTDFVDG 89
           SSSS   SP  P  TGVIV+GAGLAGLAAATHL S+NIPFLLLEASD VGGRVRTD VDG
Sbjct: 35  SSSSPLQSPPLPKTTGVIVIGAGLAGLAAATHLNSQNIPFLLLEASDAVGGRVRTDIVDG 94

Query: 90  FLLDRGFQIFITAYPEAQALLDYQSLRLQKFYSGALVYFDGQFHTVADPLRHFTDSLASL 149
           FLLDRGFQIFITAYPEAQ LL+YQSL LQKFYSGA +++DGQFHTVADPLRHF DS  SL
Sbjct: 95  FLLDRGFQIFITAYPEAQKLLNYQSLNLQKFYSGARIFYDGQFHTVADPLRHFWDSARSL 154

Query: 150 TNPIGSVIDKLLIGLTRARVLGKSDREIFTAGEASTMELLKEIGFSDSIITRFFRPFFGG 209
           TNPIGS +DKLLIG TR R L KSD EI TA E  T+ELLK++GFSDSII RFFRPFFGG
Sbjct: 155 TNPIGSPLDKLLIGSTRIRALVKSDEEILTAEEVPTIELLKKLGFSDSIIRRFFRPFFGG 214

Query: 210 IFFDPELETSSRLFNFIFKCLALGENTLPANGIGAIPQQLAANLPPETILLNSRVVSVDF 269
           IFFDP+LET+SRLFNFIFKCLALG+NTLPA GI AIP+QLAA LP  +ILLNS+ VSVD 
Sbjct: 215 IFFDPDLETTSRLFNFIFKCLALGDNTLPARGISAIPEQLAARLPSGSILLNSKAVSVDL 274

Query: 270 E-SKSPIVKLQSGEIIASEMGVIVAVEEPEAERLLAGRRKIGSRKPPRSTVCLYFAADRD 329
           + S SP+V+LQ+G+++ SE+GVIVAVEEP A  LL+GR     +KP RSTVCLYF A+RD
Sbjct: 275 DNSDSPLVRLQNGDVLKSELGVIVAVEEPAAVHLLSGRTGPVPKKPVRSTVCLYFTANRD 334

Query: 330 RIPVREPVLFLNGSGKGIVNNMFFATNVAPSYGPAEKVLVSVSLIGKFEDVGDEDLTAEV 389
           +IPV +PVLFLNGSGKGIVNNMFF TNVAPS+GP +K LVSVSLIG FE V DE+L  +V
Sbjct: 335 QIPVPDPVLFLNGSGKGIVNNMFFVTNVAPSFGPPDKGLVSVSLIGLFEGVSDEELVGKV 394

Query: 390 IREMSDWFGESTIEGWKHLRTYRIGFAQPNQSPPSDLMKDPTVESGLYVCGDYLTSATFD 449
           + E+S WFGE  +  W HLRTYRIGFAQPNQ PP+DL KDP VESGLYVCGD+LTSATFD
Sbjct: 395 VNELSGWFGEKMVSKWNHLRTYRIGFAQPNQCPPTDLKKDPRVESGLYVCGDHLTSATFD 454

Query: 450 GALVSGRKAVEALVRERAV 468
           GALVSGR+A E+L+++RA+
Sbjct: 455 GALVSGRRAAESLLKDRAL 473

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g08440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PDS_ONCHC	3.4e-08	23.77	15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Oncidium hybrid culti...	[more]
PPOCM_ARATH	7.6e-08	28.16	Protoporphyrinogen oxidase 2, chloroplastic/mitochondrial OS=Arabidopsis thalian...	[more]
PPOX_MYXXA	3.2e-06	43.66	Protoporphyrinogen oxidase OS=Myxococcus xanthus GN=hemY PE=1 SV=1	[more]

BLAST of Cp4.1LG03g08440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCJ0_CUCSA	1.3e-219	83.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G822340 PE=4 SV=1	[more]
B9RNM3_RICCO	3.7e-187	70.34	Amine oxidase, putative OS=Ricinus communis GN=RCOM_0918760 PE=4 SV=1	[more]
A0A061E2J9_THECC	2.4e-186	74.39	FAD/NAD(P)-binding oxidoreductase family protein OS=Theobroma cacao GN=TCM_00754...	[more]
A0A0R0K195_SOYBN	1.5e-183	74.72	Uncharacterized protein OS=Glycine max GN=GLYMA_05G120300 PE=4 SV=1	[more]
V7CQ56_PHAVU	4.3e-183	71.46	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G206500g PE=4 SV=1	[more]

BLAST of Cp4.1LG03g08440 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G09580.1	1.0e-167	68.38	FAD/NAD(P)-binding oxidoreductase family protein	[more]
AT5G14220.1	4.3e-09	28.16	Flavin containing amine oxidoreductase family	[more]
AT4G14210.1	1.5e-06	40.00	phytoene desaturase 3	[more]
AT3G59050.1	4.4e-06	46.00	polyamine oxidase 3	[more]

BLAST of Cp4.1LG03g08440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085207\|ref\|XP_008443300.1\|	8.2e-220	83.83	PREDICTED: 15-cis-phytoene desaturase, chloroplastic/chromoplastic [Cucumis melo...	[more]
gi\|449437759\|ref\|XP_004136658.1\|	1.8e-219	83.62	PREDICTED: 15-cis-phytoene desaturase, chloroplastic/chromoplastic [Cucumis sati...	[more]
gi\|255548572\|ref\|XP_002515342.1\|	5.4e-187	70.34	PREDICTED: 15-cis-phytoene desaturase, chloroplastic/chromoplastic [Ricinus comm...	[more]
gi\|590688729\|ref\|XP_007043031.1\|	3.5e-186	74.39	FAD/NAD(P)-binding oxidoreductase family protein [Theobroma cacao]	[more]
gi\|356512089\|ref\|XP_003524753.1\|	2.1e-183	74.72	PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR023753	FAD/NAD-binding_dom
IPR002937	Amino_oxidase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016556	mRNA modification
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0010103	stomatal complex morphogenesis
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g08440.1	Cp4.1LG03g08440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002937	Amine oxidase	PFAM	PF01593	Amino_oxidase	coord: 53..461 score: 3.2
IPR023753	FAD/NAD(P)-binding domain	GENE3D	G3DSA:3.50.50.60		coord: 44..82 score: 3.2E-29coord: 243..323 score: 3.2E-29coord: 425..465 score: 3.2
IPR023753	FAD/NAD(P)-binding domain	unknown	SSF51905	FAD/NAD(P)-binding domain	coord: 426..463 score: 1.17E-46coord: 42..335 score: 1.17
None	No IPR available	PANTHER	PTHR10742	AMINE OXIDASE	coord: 43..467 score: 1.7E
None	No IPR available	PANTHER	PTHR10742:SF287	PROTEIN GLF-1	coord: 43..467 score: 1.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG03g08440	Cucsa.338080	Cucumber (Gy14) v1	cgycpeB0888
Cp4.1LG03g08440	CmaCh14G005350	Cucurbita maxima (Rimu)	cmacpeB283
Cp4.1LG03g08440	CmoCh14G005360	Cucurbita moschata (Rifu)	cmocpeB245
Cp4.1LG03g08440	Cla002910	Watermelon (97103) v1	cpewmB597
Cp4.1LG03g08440	Csa3G822340	Cucumber (Chinese Long) v2	cpecuB597
Cp4.1LG03g08440	MELO3C009790	Melon (DHL92) v3.5.1	cpemeB572
Cp4.1LG03g08440	ClCG10G015890	Watermelon (Charleston Gray)	cpewcgB546
Cp4.1LG03g08440	CSPI03G38170	Wild cucumber (PI 183967)	cpecpiB599
Cp4.1LG03g08440	Lsi03G015740	Bottle gourd (USVL1VR-Ls)	cpelsiB503
Cp4.1LG03g08440	MELO3C009790.2	Melon (DHL92) v3.6.1	cpemedB679
Cp4.1LG03g08440	CsaV3_3G040590	Cucumber (Chinese Long) v3	cpecucB0747
Cp4.1LG03g08440	Bhi11G002376	Wax gourd	cpewgoB0743
Cp4.1LG03g08440	CsGy3G035640	Cucumber (Gy14) v2	cgybcpeB395
Cp4.1LG03g08440	Carg03467	Silver-seed gourd	carcpeB0353

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG03g08440	Cucurbita pepo (Zucchini)	cpecpeB486
Cp4.1LG03g08440	Cucurbita maxima (Rimu)	cmacpeB682
Cp4.1LG03g08440	Cucurbita maxima (Rimu)	cmacpeB841
Cp4.1LG03g08440	Cucurbita moschata (Rifu)	cmocpeB789
Cp4.1LG03g08440	Bottle gourd (USVL1VR-Ls)	cpelsiB489
Cp4.1LG03g08440	Silver-seed gourd	carcpeB0444