Cp4.1LG03g08130 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g08130
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBranched-chain-amino-acid aminotransferase
LocationCp4.1LG03 : 2909150 .. 2913365 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACATTATTTTAAAAAATTAATTAATTACGATAAATCGGTAGAACTCCATTTGGACCCAAACTGTTGACCGTGTCTTCTCTCCGTAGTTGCGACGATATCACCGCTGCCGCCGCCGCCGTGGAGTGCCTGCCAGATTTGAGAGGTCGACCTATTCACAGGCGACAGTGAGTTTCATTTTTTTTTTTTTTTCTTAACGCTTTGTGCTTCCGCTTTCTCATTCTAATTCACTTGGCCATTGATCAGTTGATATAGGAGATAATTTCGGTGAAAACTGTAGCGTTTCTTGCCTTTTCATATGTAGAATCCTCCTTTTTTCTTTTTCTTTTGCAAATCTCAGTCAGTTAATTGATTTATTATGTTAATGAAATAGCGACCTCTTACCGGCAATGAGCATCAAGTCGTAGAAGAGTTTTATTCACTATCGCACCATTCTCTGTTCTCACCTATTTGACTGTCGGACTGCAATTTTAGTTTCGATCATAACTTCCAGTCCTTGTTTGTATTCTTGTATTTCTAGGGTGCTTTTATGTCAAATTCATCAATTCTTGTATTTATTATGTCAAATTCATCAATTATTGTATTTATTATGTCAAATTTTAGCTTGATTTTTTGTTGCTGGATTGTATTTCATCAAATTCATCAAACCAATCTAAATAGATAAGCCCTTTTAAGCTTTGTTAACTTCTACTTGTTCTCAAACATTTATAATAACATCACTGATTTAGGGTGCTTTTTTAAAAATGAAATCTTAGTTTTGGAACCCGTTGAAGTCTAAACCACTTGGAATGGACCCCAAGCACACAGGAGAGGTTTTGAAGTAAGTTCTTTTCAATTAACTCAGTTGTAACCCCTTTTGTGTATTTGGCTATTGGATGCTGATCAGTGATCATTAACTTCTGATTTTGTGGTGCAGACATTTGGAGAAGCAGGATGAGCTTCTTATGGATGCTTATAGATCAATGTCCCATGAACTACATAAACTTCAGGTTTCTTTTCTTTTGCTCTAGATTTCTGATTTATTTGATGAACTTGTATTTCTAATTTAATATTATTTTTGAGTGAGTTCATTCTAATGCAAATGTTTGAGCTGCATTGTACAGCTTTCTAAGGCTTTACCTTTTAGAATACTTTGCAAGAAATCTGACATATTAATGCATATATGATTCCATTCCCTCGCCTTTATGTATTTACCTGATTGGCATCCGTGAATATCTGATTCAGTTAGAGATTTTATTTCATTGACTTTCATTTTTGACGTTCTTAAGCCTCTAGGACTCTTATCTTAGGTTGTTTTGACTGCTGAATATAGTTCTTTTAGAAGCTACAATTAAAATATTGTTTCACTAGTATTTCATCAATTTGTATATGCGTTTTTATGACAATTTTGTACTGTCAAGAGAATGGGAGGGAGGTTTCCAAACAATATTTGAGTGTGCTTAGTTTTAAACGTAATCAGTTACGATTGCAAGATGAAGTATTTTCCTTTTGAACCATAGTAACTTACCATTGTTTGCATTATACCTTAGTACCTTGTTATTGCAAGTGTGGGAAAAGGAAGAGTAACTGCAATTCACATATAGAGATGAGTTTTCATTTAATGCAGTTGGAAATTCAAAATCAATGTAATATTGTTTTGTTGCATTAGTCTGTATAAAGAGAACGCCTGGAATTTTGGGTTACTATTTGAAGGTTGTTGGTTCTGTTGCTAGTTCTTAAGTAATTGGAATGCTAATATTTGCAGGTAGAAGAAGAAATGCTCATGCGCAAGTTCTATGAAATAATGTCTGCTCATGGTCTAACAAAGAAGGTAGCAATATCCAAATTTCTCTTAATTATTCTTTGGATGCTCTTTTTATGTGCGCAAAGAGCTCGAATGCTTAATAAATCTGATTTAATTCTGATCTACCTTAAGAACTGGACTGGCTGGAATAAATGGCTTAGATGTTTCTAATAACAGCAGGTTCCTTCGGCAGTTAGGTTGTTAAGAAGCAGTGCAAGCTTGCAAGTTGCCACTAACTGTACCTTTGACTAAACTAGGTCTCTTATAACGGTTAAATGAACACGACTCTCCACAATCGTATGATATTGTCCATTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATACCAATGGAGAGAGTATTCCTTGATTATAAACCCATGATCATTCCCTAAATTAGCCGATGTGGGACTTTCATCATCCAACACCTCCACTCGAACAAAGTACGCCTCCCCTTAATCGAGGCTCGACTCCTTTTTCTTTTGGAGTCTTAGTCATTTTTTATTGTGCCTTTGAGGAGGCTCGACTCCTTTTCTTTTGGAGTCCTTTATTCGACATTTGAGAATTTACCAATCTATTGGCACGACTAAGTTTAGGGCATTGACTCTGATATCATATTAAATGAATACGATTCTCCTTAATGGTATGATATTGTCCACTTTGAACATAAGCTCTCATGACTTTGCTTTGGGCTTCCCCAAAAAGTCTCGTACCAATGGAGACAGTATTCCTTGATTATAAACACCCATGATCATTGGGACTTTCATCATCCAACAATAACTATCAGGCTTGGCTAACCAATTAAGTATTAAGGAGTATTAAGGAGATTCCCAAATGTTTAGACTAGAAGCTTTGTCAAATAGTGTGATGAAAGTAAGGAGATCCTCGATTACGTGCAAACGAAAAGTGATTAATGGCCAAGTGAAGAGTTATCAATATTTATGGATTTTGTAAATCCTTTCAAGGCTCCATTGTTCAGCATCCTACCTAGACAACCTACGACCAAAATGAAAAGCTACAAGAAGTTCAAATTAACTGTTCTAACCTTAAGAAAGTCACCAACTAATTACTAAAGATGCCCCGAATGACGTTCTTAATAACTCTCTAACATATTCTTATCTTCCACTTGTTGACTTTGTTAAACATGTAATTTGTTTGTGCTTTGCAGAGTGAAGATGGTCGTGATGGTTGTGGCGGCGAAAGGAATACGTTAGCATCTATTACTGATAGCAAATTGGACTAAATGTAATTACTTCTTTTTGTACATTAATGACTCTTGTATTCTCTAAAAGAAACCCATCATTTTGCCGGGACATCAATAATACATCAACCTAGCAAAATTAATAATGCACTTGACTTGCAACATGTTCGGAGGTTCGAATCTCCCGCTCTACATATTGTTGAACTAAAAAGTAAAACATGCATTATGCTCCCAATTTTTATCCAGATAATAGAAACCATTAAAATTTCTAACTTTTGCTTTCCTGATAAGTTACAATCTTTATTTTAAAATATTACAACTTACAAGGTCAGGCAGCCTATGTGCTAAATAGTGCCCAATGAAAATATTCTTAATCAGCTTTACAGCATAGTATCAAATATAAATATCTTCTGAAATGTTGCGTTACCAAACCATAAGATAACAAGGCGATTAAGTAATTTCTCAACGTTAATCAATCAACATCTCTCCGTTTGTGGGTTGGATGGTTGTCTTGCTGCTCTGCATAGCAACCCCTCCTCCTTCCAGTTGCTTCTTCAGTTCTTGTGACCTGATAAATCCTTTGATTCTTGCTTTCAGTTCTTCGTTCGGTATTAGCATGTCTGCTGTCAGATGAGACCGGTTGAACGGATCGGTCTGCAAATCATGTAGAGTTTAGCCAAAAGAAACTGAACATTTTGTTTCGACATTGCTTAAAGAAAATGCAAGTCTTACGCTGTCGCTGAGGAGATGTCTTTGAATGACGGGTCTGTCGACCGTGATCCTTGAAGAAGGTAAGATCACAGGGTCCTTCATTAAAGTGTACTACACAAGGAGAAAAATGAGCTTTAACTGGTTGTCACCAACATAGTATCAGTTTCGTTTTTTTAAGCTTCAAATATGTGTCTGATCAAAACCATTCCATTTTTATGCACACATCAAAAGCTTTTTTTGCTCAGTGATCATACATAATGAAATCAATAACTCAATGACCCAAAAGAGTGATTGAAACCCACAACTTAAACATACAATGAGTGGAGTAAAACGTACTTGGATTGGGTCGAGGAACTCGTCCGGTATATCTCCTAGAGTAGCTTCAGCATCCATTGCCTCAGAAGCTGCATCCTTGGCTTTGTTACCAAGAGCAACAAACTCCTGTATGATCCTACCATCCTCTCCAATTCGCCTAAGTACAACTGCTGCAGCATTGAACAACTG

mRNA sequence

TACATTATTTTAAAAAATTAATTAATTACGATAAATCGGTAGAACTCCATTTGGACCCAAACTGTTGACCGTGTCTTCTCTCCGTAGTTGCGACGATATCACCGCTGCCGCCGCCGCCGTGGAGTGCCTGCCAGATTTGAGAGGTCGACCTATTCACAGGCGACATTTTGGAACCCGTTGAAGTCTAAACCACTTGGAATGGACCCCAAGCACACAGGAGAGGTTTTGAAACATTTGGAGAAGCAGGATGAGCTTCTTATGGATGCTTATAGATCAATGTCCCATGAACTACATAAACTTCAGGTAGAAGAAGAAATGCTCATGCGCAAGTTCTATGAAATAATGTCTGCTCATGGTCTAACAAAGAAGAGTGAAGATGGTCGTGATGGTTGTGGCGGCGAAAGGAATACGTTAGCATCTATTACTGATAGCAAATTGGACTAAATGTAATTACTTCTTTTTGTACATTAATGACTCTTGTATTCTCTAAAAGAAACCCATCATTTTGCCGGGACATCAATAATACATCAACCTAGCAAAATTAATAATGCACTTGACTTGCAACATGTTCGGAGGTTCGAATCTCCCGCTCTACATATTGTTGAACTAAAAAGTAAAACATGCATTATGCTCCCAATTTTTATCCAGATAATAGAAACCATTAAAATTTCTAACTTTTGCTTTCCTGATAAGTTACAATCTTTATTTTAAAATATTACAACTTACAAGGTCAGGCAGCCTATGTGCTAAATAGTGCCCAATGAAAATATTCTTAATCAGCTTTACAGCATAGTATCAAATATAAATATCTTCTGAAATGTTGCGTTACCAAACCATAAGATAACAAGGCGATTAAGTAATTTCTCAACGTTAATCAATCAACATCTCTCCGTTTGTGGGTTGGATGGTTGTCTTGCTGCTCTGCATAGCAACCCCTCCTCCTTCCAGTTGCTTCTTCAGTTCTTGTGACCTGATAAATCCTTTGATTCTTGCTTTCAGTTCTTCGTTCGGTATTAGCATGTCTGCTGTCAGATGAGACCGGTTGAACGGATCGGTCTGCAAATCATGTAGAGTTTAGCCAAAAGAAACTGAACATTTTGTTTCGACATTGCTTAAAGAAAATGCAAGTCTTACGCTGTCGCTGAGGAGATGTCTTTGAATGACGGGTCTGTCGACCGTGATCCTTGAAGAAGGTAAGATCACAGGGTCCTTCATTAAAGTGTACTACACAAGGAGAAAAATGAGCTTTAACTGGTTGTCACCAACATAGTATCAGTTTCGTTTTTTTAAGCTTCAAATATGTGTCTGATCAAAACCATTCCATTTTTATGCACACATCAAAAGCTTTTTTTGCTCAGTGATCATACATAATGAAATCAATAACTCAATGACCCAAAAGAGTGATTGAAACCCACAACTTAAACATACAATGAGTGGAGTAAAACGTACTTGGATTGGGTCGAGGAACTCGTCCGGTATATCTCCTAGAGTAGCTTCAGCATCCATTGCCTCAGAAGCTGCATCCTTGGCTTTGTTACCAAGAGCAACAAACTCCTGTATGATCCTACCATCCTCTCCAATTCGCCTAAGTACAACTGCTGCAGCATTGAACAACTG

Coding sequence (CDS)

ATGGACCCCAAGCACACAGGAGAGGTTTTGAAACATTTGGAGAAGCAGGATGAGCTTCTTATGGATGCTTATAGATCAATGTCCCATGAACTACATAAACTTCAGGTAGAAGAAGAAATGCTCATGCGCAAGTTCTATGAAATAATGTCTGCTCATGGTCTAACAAAGAAGAGTGAAGATGGTCGTGATGGTTGTGGCGGCGAAAGGAATACGTTAGCATCTATTACTGATAGCAAATTGGACTAA

Protein sequence

MDPKHTGEVLKHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRDGCGGERNTLASITDSKLD
Homology
[Close]
BLAST of Cp4.1LG03g08130 vs. TrEMBL
Match: A0A0A0LF72_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824790 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 7.0e-25
Identity = 59/70 (84.29%), Postives = 62/70 (88.57%), Query Frame = 1 

Query: 1   MDPKHTGEVLKHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
           MDPKHTGE+LKHLEKQ E LMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGL KK+ED
Sbjct: 87  MDPKHTGEILKHLEKQGEFLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNED 146

Query: 61  GRDGCGGERN 71
            R+  G  RN
Sbjct: 147 DRNSSGSARN 156

[Close]
BLAST of Cp4.1LG03g08130 vs. TrEMBL
Match: A0A103Y9I3_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_016677 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.7e-21
Identity = 51/64 (79.69%), Postives = 59/64 (92.19%), Query Frame = 1 

Query: 1  MDPKHTGEVLKHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MDPK+TGE+L+HLEKQDELLMDAYRSMSHELHKLQVEEEMLMR FY++M+A GL  K +D
Sbjct: 1  MDPKYTGEMLRHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRAFYDLMAAQGLATKKDD 60

Query: 61 GRDG 65
          GR+G
Sbjct: 61 GRNG 64

[Close]
BLAST of Cp4.1LG03g08130 vs. TrEMBL
Match: A0A059DEI8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01208 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 6.1e-21
Identity = 54/69 (78.26%), Postives = 59/69 (85.51%), Query Frame = 1 

Query: 1  MDPKHTGEVLKHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MD K++GE LKHLEKQ+ELLMDAYRSMSHELHKLQVEEEMLMRKFYE+MSA GLTKK   
Sbjct: 1  MDAKYSGETLKHLEKQNELLMDAYRSMSHELHKLQVEEEMLMRKFYELMSAQGLTKKDGV 60

Query: 61 GRDGCGGER 70
          G+D  G  R
Sbjct: 61 GKDASGDNR 69

[Close]
BLAST of Cp4.1LG03g08130 vs. TrEMBL
Match: W9RUQ9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009407 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.5e-19
Identity = 48/60 (80.00%), Postives = 55/60 (91.67%), Query Frame = 1 

Query: 1  MDPKHTGEVLKHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MD +  G+++KHLEKQ+ELLM+AYRSMSHELHKLQVEEEMLMRKFYEIMSAHG  KK+ED
Sbjct: 1  MDSRQNGDIIKHLEKQNELLMEAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGKIKKTED 60

[Close]
BLAST of Cp4.1LG03g08130 vs. TrEMBL
Match: B9SGZ3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0579590 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.5e-19
Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 1 

Query: 1  MDPKHTGEVLKHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSE- 60
          MDP+++GE LKHLEKQ+ELLM AY S+SHELHKLQVEEEMLMRKFY++M+AHGL KK+E 
Sbjct: 1  MDPRYSGETLKHLEKQNELLMHAYNSVSHELHKLQVEEEMLMRKFYQLMAAHGLPKKNEG 60

Query: 61 -----DGRDGCGGERNTLASITDSKL 81
               DGR G G     L + +D  +
Sbjct: 61 NAEMKDGR-GVGDSTALLTNTSDDSI 85

[Close]
BLAST of Cp4.1LG03g08130 vs. TAIR10
Match: AT4G37608.1 (AT4G37608.1 unknown protein)

HSP 1 Score: 72.4 bits (176), Expect = 1.4e-13
Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 1 

Query: 1  MDPKHTGEVLKHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          M+P+HT +VLKHLEKQ ELL +A ++M  EL KL+VE E +MRK YE+M+ H L KK  +
Sbjct: 1  MEPQHTDDVLKHLEKQTELLKEAQKNMLQELQKLEVEHETMMRKLYELMNTHSLNKKKME 60

Query: 61 GRDGCGGERNTLASITDS 79
                  R T+ + + S
Sbjct: 61 ETQNVLEGRETIEASSPS 78

[Close]
BLAST of Cp4.1LG03g08130 vs. NCBI nr
Match: gi|700204401|gb|KGN59534.1| (hypothetical protein Csa_3G824790 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 1.0e-24
Identity = 59/70 (84.29%), Postives = 62/70 (88.57%), Query Frame = 1 

Query: 1   MDPKHTGEVLKHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
           MDPKHTGE+LKHLEKQ E LMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGL KK+ED
Sbjct: 87  MDPKHTGEILKHLEKQGEFLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNED 146

Query: 61  GRDGCGGERN 71
            R+  G  RN
Sbjct: 147 DRNSSGSARN 156

[Close]
BLAST of Cp4.1LG03g08130 vs. NCBI nr
Match: gi|659085339|ref|XP_008443366.1| (PREDICTED: uncharacterized protein LOC103486972 [Cucumis melo])

HSP 1 Score: 118.6 bits (296), Expect = 5.0e-24
Identity = 58/70 (82.86%), Postives = 62/70 (88.57%), Query Frame = 1 

Query: 1  MDPKHTGEVLKHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MDPKHT E+LKHLEKQDE LMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGL KK+E+
Sbjct: 1  MDPKHTVEILKHLEKQDEFLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEE 60

Query: 61 GRDGCGGERN 71
           R+  G  RN
Sbjct: 61 DRNSSGSARN 70

[Close]
BLAST of Cp4.1LG03g08130 vs. NCBI nr
Match: gi|976920256|gb|KVI04989.1| (hypothetical protein Ccrd_016677 [Cynara cardunculus var. scolymus])

HSP 1 Score: 108.2 bits (269), Expect = 6.7e-21
Identity = 51/64 (79.69%), Postives = 59/64 (92.19%), Query Frame = 1 

Query: 1  MDPKHTGEVLKHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MDPK+TGE+L+HLEKQDELLMDAYRSMSHELHKLQVEEEMLMR FY++M+A GL  K +D
Sbjct: 1  MDPKYTGEMLRHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRAFYDLMAAQGLATKKDD 60

Query: 61 GRDG 65
          GR+G
Sbjct: 61 GRNG 64

[Close]
BLAST of Cp4.1LG03g08130 vs. NCBI nr
Match: gi|702241785|ref|XP_010047125.1| (PREDICTED: uncharacterized protein LOC104436094 isoform X2 [Eucalyptus grandis])

HSP 1 Score: 107.8 bits (268), Expect = 8.8e-21
Identity = 54/69 (78.26%), Postives = 59/69 (85.51%), Query Frame = 1 

Query: 1  MDPKHTGEVLKHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MD K++GE LKHLEKQ+ELLMDAYRSMSHELHKLQVEEEMLMRKFYE+MSA GLTKK   
Sbjct: 1  MDAKYSGETLKHLEKQNELLMDAYRSMSHELHKLQVEEEMLMRKFYELMSAQGLTKKDGV 60

Query: 61 GRDGCGGER 70
          G+D  G  R
Sbjct: 61 GKDASGDNR 69

[Close]
BLAST of Cp4.1LG03g08130 vs. NCBI nr
Match: gi|702241779|ref|XP_010047116.1| (PREDICTED: uncharacterized protein LOC104436094 isoform X1 [Eucalyptus grandis])

HSP 1 Score: 107.8 bits (268), Expect = 8.8e-21
Identity = 54/69 (78.26%), Postives = 59/69 (85.51%), Query Frame = 1 

Query: 1  MDPKHTGEVLKHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MD K++GE LKHLEKQ+ELLMDAYRSMSHELHKLQVEEEMLMRKFYE+MSA GLTKK   
Sbjct: 20 MDAKYSGETLKHLEKQNELLMDAYRSMSHELHKLQVEEEMLMRKFYELMSAQGLTKKDGV 79

Query: 61 GRDGCGGER 70
          G+D  G  R
Sbjct: 80 GKDASGDNR 88

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g08130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG03g08130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LF72_CUCSA7.0e-2584.29Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824790 PE=4 SV=1[more]
A0A103Y9I3_CYNCS4.7e-2179.69Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_016677 PE=4 ... [more]
A0A059DEI8_EUCGR6.1e-2178.26Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01208 PE=4 SV=1[more]
W9RUQ9_9ROSA7.5e-1980.00Uncharacterized protein OS=Morus notabilis GN=L484_009407 PE=4 SV=1[more]
B9SGZ3_RICCO7.5e-1961.63Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0579590 PE=4 SV=1[more]
BLAST of Cp4.1LG03g08130 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G37608.11.4e-1347.44 unknown protein[more]
BLAST of Cp4.1LG03g08130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700204401|gb|KGN59534.1|1.0e-2484.29hypothetical protein Csa_3G824790 [Cucumis sativus][more]
gi|659085339|ref|XP_008443366.1|5.0e-2482.86PREDICTED: uncharacterized protein LOC103486972 [Cucumis melo][more]
gi|976920256|gb|KVI04989.1|6.7e-2179.69hypothetical protein Ccrd_016677 [Cynara cardunculus var. scolymus][more]
gi|702241785|ref|XP_010047125.1|8.8e-2178.26PREDICTED: uncharacterized protein LOC104436094 isoform X2 [Eucalyptus grandis][more]
gi|702241779|ref|XP_010047116.1|8.8e-2178.26PREDICTED: uncharacterized protein LOC104436094 isoform X1 [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0035335 peptidyl-tyrosine dephosphorylation
biological_process GO:0009555 pollen development
biological_process GO:0006570 tyrosine metabolic process
biological_process GO:0030048 actin filament-based movement
biological_process GO:0009860 pollen tube growth
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0004725 protein tyrosine phosphatase activity
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
molecular_function GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g08130.1Cp4.1LG03g08130.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37718FAMILY NOT NAMEDcoord: 2..57
score: 9.1
NoneNo IPR availablePANTHERPTHR37718:SF1SUBFAMILY NOT NAMEDcoord: 2..57
score: 9.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g08130CmaCh14G005700Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g08130CmoCh14G005730Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g08130Csa3G824790Cucumber (Chinese Long) v2cpecuB597
Cp4.1LG03g08130ClCG10G015420Watermelon (Charleston Gray)cpewcgB546
Cp4.1LG03g08130CSPI03G38670Wild cucumber (PI 183967)cpecpiB599
Cp4.1LG03g08130Lsi03G015170Bottle gourd (USVL1VR-Ls)cpelsiB503
Cp4.1LG03g08130MELO3C030975.2Melon (DHL92) v3.6.1cpemedB679
Cp4.1LG03g08130CsaV3_3G041080Cucumber (Chinese Long) v3cpecucB0747
Cp4.1LG03g08130Bhi11G002448Wax gourdcpewgoB0743
Cp4.1LG03g08130CsGy3G036200Cucumber (Gy14) v2cgybcpeB395
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g08130Wax gourdcpewgoB0768
Cp4.1LG03g08130Cucurbita pepo (Zucchini)cpecpeB218
Cp4.1LG03g08130Cucurbita pepo (Zucchini)cpecpeB397
Cp4.1LG03g08130Cucumber (Gy14) v1cgycpeB0426
Cp4.1LG03g08130Cucumber (Gy14) v1cgycpeB0888
Cp4.1LG03g08130Cucurbita maxima (Rimu)cmacpeB327
Cp4.1LG03g08130Wild cucumber (PI 183967)cpecpiB623
Cp4.1LG03g08130Cucumber (Chinese Long) v2cpecuB621
Cp4.1LG03g08130Watermelon (97103) v1cpewmB597
Cp4.1LG03g08130Melon (DHL92) v3.5.1cpemeB572
Cp4.1LG03g08130Melon (DHL92) v3.6.1cpemedB652
Cp4.1LG03g08130Silver-seed gourdcarcpeB0378
Cp4.1LG03g08130Silver-seed gourdcarcpeB0613
Cp4.1LG03g08130Silver-seed gourdcarcpeB0968
Cp4.1LG03g08130Cucumber (Chinese Long) v3cpecucB0775