Cp4.1LG03g07840 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG03g07840
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionChloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
LocationCp4.1LG03 : 3191652 .. 3198136 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCTTCACTCTTAAACCGCTGATAGACCAGTCCCCTCCGCCCTTCACCTTCTTCTCATCTCAGCTCCATCCCACCCTCATCTCCCATCCTCCAAAATCCAACCGCTTCCTCCTCCGCTGCTCCGCCGTCGATTCCGACGCCCTCCCCAAATCCGCTATCCAAAGAATTGCCGACAAGCTTCGAAGCCTTGGCTTCACTGAGCAACCGCCCGAACCAGTATCGGACCCTAATGCACCTTCTACGCCTGGAGAAATCTTCGTTCCGTTGCCCAATCAACTGNTTCAAAGAATTGCGGACAAGCTTCGAAGCCTCGGCTTCACTGAACAACCGCCCGAACCAGTATCGGACCCTAATGCACCCTCTACGCCTGGAGAAATCTTCGTTCCGTTGCCCAATCAACTGCCCAAGTACCGGGTTGGGCACACCATTGATTCCAGCTGGAGCACGCCTGAGAATCCGGTTCCGGAACCGGGAACGGGGTCTGCAATTAAGAGGTTTCATATAATGAGAGATGAGTTGGAGAAGCGGAAGAGGGAGGATGGGGTGAAGCAGAGGAAGAGGGAGGAGAGAGCGCCGACTTTGGCGGAGCTGAGCTTGCCTGAGGAGGAGTTGAGGAGGCTTCAGGGAATTGGGATTAGGTTGAAGCGGAAGCTTAAGATTGGGAAGGCTGGGGTGACGGAGGGGATTGTTAACACTATACACGAGCAATGGAGGCGGTCGGAGGTTGTGAAGATAGTGTGTGAAGATCTGTGTAGGTTGAACATGAAGCGGACACATGATTTATTGGAGGTTTGGTTCTTGATTTCTGATTTTAACTGCTTGAAATGATTGTTTCTATTATAATGTTATGAAATCCTTCAAGTCATCTTTGTAGTTCCTTGTTTTCCCCGGCACAATCAATCTAATTCTGTCTTGTTCTCCACAATCTCAGAGAAAAACTGGAGGAATTGTTGTATGGAGATCTGGAAGTAAAATTATATTATATCGAGGGCCCAATTATGTATATCCTTACTTCTCTGATGAAATTTTGAAACATGATGCATCACAAGGTGCTTTACTGGATTCACATAGTGATGATGATGGAGGGAACAGTGAAACAGAGAGCACTTTATCTAGCATCAATGATGAAAAGTCTGCTGAACCAACTTCATCTGATAAACTGGCCGGTGGGACTCTCATTCAAGGTGTTGGTGCTCCAAACAAAGTGAGATTTGAACTGCCAGGTGAGGCAGAACTTGCAGAAGATGCTGAGAGTTTGTTAGAAGGACTAGGTCCTCGTTTTTCGGATTGGTGGGGATATGACCCTCTACCTGTTGATGCGGATCTTCTTCCTGCTGTTGTTCCGGGATACCGTAAGCCATTCCGTCTTCTCCCATATGGAGTGAAGCCTAAGCTAACCAATGATGAAATGACCTCACTGAGGAGACTTTCTAGGCCTTTGCCATGCCATTTTGCATTGGGTGAGTTGCGTTGATACATATTCTTTATAGTACGGTCGGGATCATGTCTTATATTTTCATCATTTTACAGGTCGTAATAGGAACCTTCAAGGGCTTGCTGCTTCCATTATCAAGCTGTGGGAAAAATGTGAGATAGCCAAAATTGCAGTGAAAAGAGGCGTACAGAACACAAACAGTGTGTTGATGGCTGAAGAGTTACAGGTTATTGATACGTCTCTCTCATGAAAAAAACCGGACTTTCATTGAGAGGTTATTGATAAATTTCAATTCTTACGAACAATATGCCTTACATCTTATGTCTGTTGAGTCTTGCTAACACTTACGAAAACATCACAAGCTCCAGGAATAATGTCACGTAGTTTTTCAGTCCGTGTAAACAAAGAATACCAGGTAGCATGTCTGGTTAAATATGAAAAAGAAATCTGTATGTTCTTCAGACTTAGGAATATAGTGTATGCTGACGGTTAGTTCTTGGAGCAATTTTCTTATTTTATGCATCTTTTACAAGCAGATTTTCTTCATGTGCTTATAAAATTAATATTGTCTTCACAGCTGCTAACTGGAGGAACTTTGCTTTCCCGAGACAGGGAATTCATCGTCTTCTATAGAGGAAAGGATTTCCTGCCATTTGCTGTTTCTTCTGCAATCGAACAGCAACGGTACATTCGATTACAAAAAATGAAACAGATGGATAATGCACTATCTACAACGGTGCAGGAGAAGAAACTTGAGATAAATGAACGTGGTCCCACAAATGGAAGTCAGAGCATCACGGAGTGGAAAAGGGTTGTCTCAGAACAGAGAAAGCTGATATCATCTGAGACATCTATGAGAAAAACTACCATCAAGTTGTCCATTGTATGTCTACATTGATAATGCTGCAGCTAAGTAGCTAACAACTTCTGGTTTCTGAATTACAACTTAATGTTACTACTGAACAGGCATTGGAAAAAAAAGCGAAAGCAGAGGAACTCTTAGCGAAGCTGGAGGAAGAAGAGATGCTTCGACAACCGGAAATAGATAAAGAGGGAATAACTGTGGAGGAAAGGTATATGCTGAAGAAGGTTGGCTTGAGAATGAAGCCTTTTCTACTACTCGGTCAGTGATGCAAATCTAGAACGGAGGTTTTCATTGGAAAGTGTCATTTCAAATTGATCTTTCTAGCAGAAATAAACTCATCGAGTTTGTTTTATATTTTCCATACACACAGGTAGAAGGGGCGNTTGCAGAAATAAACTCATTGAGTTTGTTTTATATTTTCCATACACACAGGTAGAAGGGGCGTTTTTGATGGAACAGTTGAAAATATGCATCTTCACTGGAAGTATAGGGAACTTGTGAAAATAATTACTAATGAGAGAAGTTCTAAAACTGTTCATGATATTGCACGGACCTTAGAGGCAGAAAGTGGTGGAATTTTAGTTGCAGTTGAGAGAGTGAACAGGAGTTATGCTATCATTATATACCGTGGGAAGAATTACAAACGGCCTTCACGTTTAAGGCCTGAGACACTCTTGAATAAAAAAGAGGCATTGAAGCGATCTATAGAGGAACAACGTCGAAAGGTGAGACAAGATTATTCCATTTTCTTGCATGTGTACGTATCTGTTTCCCGTTCTTTTAATCTTTTCCTGTACCCCAAAGAATATAACCATATAAACAGAGAACTCGAAGGATATATTCATTTAAGTAAAGAACTCTCCATGAGATTACTAAGAAATTGGTTAAACTGATGAAACTATGGTAATATATGGTCAAGTATTGCTGTTCTTCAATGGAGTTATATTATGGCTAATTAGTCCATACAATGATGATTAAGGTTGATTGGATTCCAGTTAAAACTGATGCAACTAAAGAAAGGTCCTTTCTGTATATATGTATATGTTTTATTTTTTATCTCCCTGTCTTAAGAATCCTGACAATCAGGGTCATTTTTATTATGAGCTGCTCAATTACTCACTAGAAGGATTGTCCTCTTCTTGGATCTCATTTTATACGGGTGTATTCCAAGCACTTCAAGGTGACAATCTTCTTCAGCCACGAGTTCATGAAAAATAGCTGAATTGCTATGGTCAGCATTGTCACTGCGCTTGTATTGAAAGATGTCGTGCATTTTTAGGACTAGTTAAGATCTGAAAGAGATATCATGGATTTAGTGATCTTCCTTGTATCTAGATGAAAAGCAGTATATGAAGTTTTATATGAATGACAATTACTTAGGCTCTGATTCATGCGGTGCTTATGGGAGGATGTCTTATCTCCTTTTCTGTAATAATTTTTGTTGACTAACATAATTGTTTGTTATTCAAAAGAAACAACTTACTATTATCCCTCCTTCTGCTTCTTATTCTATTTGTTGCTGTGACATTGCAGTCATTGAAGCTTCATGTTTTAAAGCTTACACAAAACGTTAAAGAATTGAAACTTCAATTGGTGAGTTGCATTCAAATCTGCATACTCTCTCTTTGGTTTTCTTTTTCCTTTCCTATTTTTCCTAGCAATTCTGGTTGAGTCCCATAACTCTCAGGATAAAGACAAGAAAGCAATTGGTATGGAGTCGATAAAGAAATCAACGTTTCAGCAGGTGAGCCGTTTCTATACATTTTCATATACAGGACTTGTCTTTCCCCCTAATAATAATTAGATTGGTAAATTACAGTTTTGATATGAATTAGGGAAAAGAAGGGACAAACGAGATACAAACAGCTGGAAGTTTGAAATTAGATACTGATCCTGCCTGCCTCTCTCATGCAGAAGATAATGCTTGTTTGGAGGAGAATGAAGTGGTAAGATTCATACCATGTAAATGTTCATAATATCTTCTGTTTATCTTGTGCTAGAGGGTACCTCAAGTAATGGCTTCTATTCTAAAAAATGAAAATTGAAGTATCCCTAGCCTTGAGGTAAATTAAACAAAAATGTTAATTCATTACGTATTACTGCGATTTGCGTAAATGTAGGTTTGTACGTATGTTGATTCTGTTGTCTTTTGGTGAACCTGTGTTTGCTACTGTCTTAAGAAATATNACAAAAATGTTAATTCATTACGTATTACTGCGATTTGCGTAAATGTAGGTTTGTACGTATGTTGATTCTGTCGTCTTTTGGTGAACCTGTGTTTGCTACTGTCTTAAGAAATATGCATGGGTTTATTCAGAAGTGGCTTACGAATTATCCCCTGGCATGATTGTATTAGGCCATGGTCAAAGGGGGTAATGCAGCTCATACGAGTGGAACTGTCTGTTTGGAAACTTCAATAAACAGTCTACAAGCCACTCAAAGGGATAGTGATACCTTTTTAACATCTGATGGTGATCAGACTAATGCCGAACTGAAATCTTCGTCTGAACCGGTTGGGCAAGGAAACCACACAAAGGTGTCCATGGCTGAGAATGCTGCATTTGGAAGTTTTGAACCTCTATCAGTCGCTAATTGTTTGGTATGTTGACAATTATTTCTATCAATTCGATTGTTTTTCTTGGTATAGTTGCTCACACGATATAGCTGCTAGAATTCCAGTCAGGAGAGAATAATTCTGGAACTTCAGATGCCGTGCATCTTATTGCTTTGAATAAGAAGATGAAGCCATCTGTTAGATTGGAAGAGGAAAAACTAGCAATGAGGATGAACCAANCGATGTGGATGAACCAACCAGGTCAGATTCCAGCCAGAGCGCCTCAACTCTCCAACAAAGAGAGGCTTCTTCTANCAATGAGGATGAACCAACCAGGTCAGATTCCTGCCAGAGCGCCTCAACTCTCCAACAAAGAGAGGCTTCTTCTACGAAGGCAAGCGCTCAAGATGAAAAAACGTCCCGTGCTTGCTGTAGGTAACTCGTGCTTCCATCTTTTCCACTGTGAGTTTTTCCTTGCAACTTTTAAAGCCAGATATTAGGAGATGCAGTTGGACACAGCTTAAGGAACTTAGTATTAGTAACTTAGTTTCTTCATTTCCATGGACGCTTGTTCAATTTGTTAAATGGCCTCTATTAATTTTCAGGCAAGAGCAACATAATTACAGGAGTTGCAAAAGCAATCAAGCAACATTTTAAAAAACACTCTCTTGCTATAGTCAATGTCAAAGGCAGAGCCAAAGGAACATCAGTCCAGGAGATTGTTTTTAAGCTTGAGGTTACCACACCCAAGTCTTCCCTCTTGTTTGTGTTTCTCTATGTGGAAATGAATTTAATGCTTTAATATTTGTTCATTAAAACTGCCTTTCCCTTTGCTAGCATGCAACTGGTGCAGTTCTAGTCTCTCAGGAGCCCAGCAAAGTTATTCTTTACAGGGGTTGGGAGGAAGAAGATAAATCCCAAGATAGAAAACAAAGCAAGGGTGAAGCTCAACTCTCTATGTCTCCTGAACTCTTGGCAGCTATAAGGGTTGAATGTGGATTGCGGTGAACTGAAAGAAAAAGTCAGCTCCTCGTGAAATTCTAGCTTGTCTCTCAGGTATTTCTTTAATCCTCACAGTATACTTATTCTAACCTGTTATATGGCACGCCTAAAACTTCACTTCATAGAATTGACTGTTAGATTTACTTTTTACAAGATTAAACACTGGGTTTTTTTAATCGTGTTTACTTCATTTTAAGCCAGTGGATGAAAAGAATCTAAAAAGCATTCGATAATGTTATCTTAAGTTTTTATAACATCCAAGATCTGGTTCTACATGTTAAGAATTCATCCAGTTGTAAAATATGAGTCAGGAAATTATTTATTCAATCATACACGCTATGCTATGCTAGCGTATGTGTTACTTTACAAGTAACCATAGAGATATTAATTTTCTTGGGTTGACATATCATATCAGAGATGTTACTTGAAGAGTTTCTGAATGATCAAACCTCCAGTAATCAACTGGCATTCTTTGGCTTGATATTCGTGGTGGCAGACGTTTGGAACTCGTCTCTTTTGCTGCTTGTCAATGTAGCAGGTAAGATTTAAGAATGAATCTTGATGCATATGTAGATTGATAACTGATCTTCAATGGCATTAATTATTCAATTCTTTCTAATGTTGTGTTC

mRNA sequence

TCCTTCACTCTTAAACCGCTGATAGACCAGTCCCCTCCGCCCTTCACCTTCTTCTCATCTCAGCTCCATCCCACCCTCATCTCCCATCCTCCAAAATCCAACCGCTTCCTCCTCCGCTGCTCCGCCGTCGATTCCGACGCCCTCCCCAAATCCGCTATCCAAAGAATTGCCGACAAGCTTCGAAGCCTTGGCTTCACTGAGCAACCGCCCGAACCAGTATCGGACCCTAATGCACCTTCTACGCCTGGAGAAATCTTCGTTCCGTTGCCCAATCAACTGNTTCAAAGAATTGCGGACAAGCTTCGAAGCCTCGGCTTCACTGAACAACCGCCCGAACCAGTATCGGACCCTAATGCACCCTCTACGCCTGGAGAAATCTTCGTTCCGTTGCCCAATCAACTGCCCAAGTACCGGGTTGGGCACACCATTGATTCCAGCTGGAGCACGCCTGAGAATCCGGTTCCGGAACCGGGAACGGGGTCTGCAATTAAGAGGTTTCATATAATGAGAGATGAGTTGGAGAAGCGGAAGAGGGAGGATGGGGTGAAGCAGAGGAAGAGGGAGGAGAGAGCGCCGACTTTGGCGGAGCTGAGCTTGCCTGAGGAGGAGTTGAGGAGGCTTCAGGGAATTGGGATTAGGTTGAAGCGGAAGCTTAAGATTGGGAAGGCTGGGGTGACGGAGGGGATTGTTAACACTATACACGAGCAATGGAGGCGGTCGGAGGTTGTGAAGATAGTGTGTGAAGATCTGTGTAGGTTGAACATGAAGCGGACACATGATTTATTGGAGAGAAAAACTGGAGGAATTGTTGTATGGAGATCTGGAAGTAAAATTATATTATATCGAGGGCCCAATTATGTATATCCTTACTTCTCTGATGAAATTTTGAAACATGATGCATCACAAGGTGCTTTACTGGATTCACATAGTGATGATGATGGAGGGAACAGTGAAACAGAGAGCACTTTATCTAGCATCAATGATGAAAAGTCTGCTGAACCAACTTCATCTGATAAACTGGCCGGTGGGACTCTCATTCAAGGTGTTGGTGCTCCAAACAAAGTGAGATTTGAACTGCCAGGTGAGGCAGAACTTGCAGAAGATGCTGAGAGTTTGTTAGAAGGACTAGGTCCTCGTTTTTCGGATTGGTGGGGATATGACCCTCTACCTGTTGATGCGGATCTTCTTCCTGCTGTTGTTCCGGGATACCGTAAGCCATTCCGTCTTCTCCCATATGGAGTGAAGCCTAAGCTAACCAATGATGAAATGACCTCACTGAGGAGACTTTCTAGGCCTTTGCCATGCCATTTTGCATTGGGTCGTAATAGGAACCTTCAAGGGCTTGCTGCTTCCATTATCAAGCTGTGGGAAAAATGTGAGATAGCCAAAATTGCAGTGAAAAGAGGCGTACAGAACACAAACAGTGTGTTGATGGCTGAAGAGTTACAGCTGCTAACTGGAGGAACTTTGCTTTCCCGAGACAGGGAATTCATCGTCTTCTATAGAGGAAAGGATTTCCTGCCATTTGCTGTTTCTTCTGCAATCGAACAGCAACGGTACATTCGATTACAAAAAATGAAACAGATGGATAATGCACTATCTACAACGGTGCAGGAGAAGAAACTTGAGATAAATGAACGTGGTCCCACAAATGGAAGTCAGAGCATCACGGAGTGGAAAAGGGTTGTCTCAGAACAGAGAAAGCTGATATCATCTGAGACATCTATGAGAAAAACTACCATCAAGTTGTCCATTGCATTGGAAAAAAAAGCGAAAGCAGAGGAACTCTTAGCGAAGCTGGAGGAAGAAGAGATGCTTCGACAACCGGAAATAGATAAAGAGGGAATAACTGTGGAGGAAAGGTATATGCTGAAGAAGGTTGGCTTGAGAATGAAGCCTTTTCTACTACTCGGTAGAAGGGGCGTTTTTGATGGAACAGTTGAAAATATGCATCTTCACTGGAAGTATAGGGAACTTGTGAAAATAATTACTAATGAGAGAAGTTCTAAAACTGTTCATGATATTGCACGGACCTTAGAGGCAGAAAGTGGTGGAATTTTAGTTGCAGTTGAGAGAGTGAACAGGAGTTATGCTATCATTATATACCGTGGGAAGAATTACAAACGGCCTTCACGTTTAAGGCCTGAGACACTCTTGAATAAAAAAGAGGCATTGAAGCGATCTATAGAGGAACAACGTCGAAAGTCATTGAAGCTTCATGTTTTAAAGCTTACACAAAACGTTAAAGAATTGAAACTTCAATTGGATAAAGACAAGAAAGCAATTGGTATGGAGTCGATAAAGAAATCAACGTTTCAGCAGGGAAAAGAAGGGACAAACGAGATACAAACAGCTGGAAGTTTGAAATTAGATACTGATCCTGCCTGCCTCTCTCATGCAGAAGATAATGCTTGTTTGGAGGAGAATGAAGTGGCCATGGTCAAAGGGGGTAATGCAGCTCATACGAGTGGAACTGTCTGTTTGGAAACTTCAATAAACAGTCTACAAGCCACTCAAAGGGATAGTGATACCTTTTTAACATCTGATGGTGATCAGACTAATGCCGAACTGAAATCTTCGTCTGAACCGGTTGGGCAAGGAAACCACACAAAGGTGTCCATGGCTGAGAATGCTGCATTTGGAAGTTTTGAACCTCTATCAGTCGCTAATTGTTTGTCAGGAGAGAATAATTCTGGAACTTCAGATGCCGTGCATCTTATTGCTTTGAATAAGAAGATGAAGCCATCTGTTAGATTGGAAGAGGAAAAACTAGCAATGAGGATGAACCAANCGATGTGGATGAACCAACCAGGTCAGATTCCAGCCAGAGCGCCTCAACTCTCCAACAAAGAGAGGCTTCTTCTANCAATGAGGATGAACCAACCAGGTCAGATTCCTGCCAGAGCGCCTCAACTCTCCAACAAAGAGAGGCTTCTTCTACGAAGGCAAGCGCTCAAGATGAAAAAACGTCCCGTGCTTGCTGTAGGCAAGAGCAACATAATTACAGGAGTTGCAAAAGCAATCAAGCAACATTTTAAAAAACACTCTCTTGCTATAGTCAATGTCAAAGGCAGAGCCAAAGGAACATCAGTCCAGGAGATTGTTTTTAAGCTTGAGCATGCAACTGGTGCAGTTCTAGTCTCTCAGGAGCCCAGCAAAGTTATTCTTTACAGGGGTTGGGAGGAAGAAGATAAATCCCAAGATAGAAAACAAAGCAAGGGTGAAGCTCAACTCTCTATGTCTCCTGAACTCTTGGCAGCTATAAGGGTTGAATGTGGATTGCGGTGAACTGAAAGAAAAAGTCAGCTCCTCGTGAAATTCTAGCTTGTCTCTCAGAGATGTTACTTGAAGAGTTTCTGAATGATCAAACCTCCAGTAATCAACTGGCATTCTTTGGCTTGATATTCGTGGTGGCAGACGTTTGGAACTCGTCTCTTTTGCTGCTTGTCAATGTAGCAGGTAAGATTTAAGAATGAATCTTGATGCATATGTAGATTGATAACTGATCTTCAATGGCATTAATTATTCAATTCTTTCTAATGTTGTGTTC

Coding sequence (CDS)

TCCTTCACTCTTAAACCGCTGATAGACCAGTCCCCTCCGCCCTTCACCTTCTTCTCATCTCAGCTCCATCCCACCCTCATCTCCCATCCTCCAAAATCCAACCGCTTCCTCCTCCGCTGCTCCGCCGTCGATTCCGACGCCCTCCCCAAATCCGCTATCCAAAGAATTGCCGACAAGCTTCGAAGCCTTGGCTTCACTGAGCAACCGCCCGAACCAGTATCGGACCCTAATGCACCTTCTACGCCTGGAGAAATCTTCGTTCCGTTGCCCAATCAACTGNTTCAAAGAATTGCGGACAAGCTTCGAAGCCTCGGCTTCACTGAACAACCGCCCGAACCAGTATCGGACCCTAATGCACCCTCTACGCCTGGAGAAATCTTCGTTCCGTTGCCCAATCAACTGCCCAAGTACCGGGTTGGGCACACCATTGATTCCAGCTGGAGCACGCCTGAGAATCCGGTTCCGGAACCGGGAACGGGGTCTGCAATTAAGAGGTTTCATATAATGAGAGATGAGTTGGAGAAGCGGAAGAGGGAGGATGGGGTGAAGCAGAGGAAGAGGGAGGAGAGAGCGCCGACTTTGGCGGAGCTGAGCTTGCCTGAGGAGGAGTTGAGGAGGCTTCAGGGAATTGGGATTAGGTTGAAGCGGAAGCTTAAGATTGGGAAGGCTGGGGTGACGGAGGGGATTGTTAACACTATACACGAGCAATGGAGGCGGTCGGAGGTTGTGAAGATAGTGTGTGAAGATCTGTGTAGGTTGAACATGAAGCGGACACATGATTTATTGGAGAGAAAAACTGGAGGAATTGTTGTATGGAGATCTGGAAGTAAAATTATATTATATCGAGGGCCCAATTATGTATATCCTTACTTCTCTGATGAAATTTTGAAACATGATGCATCACAAGGTGCTTTACTGGATTCACATAGTGATGATGATGGAGGGAACAGTGAAACAGAGAGCACTTTATCTAGCATCAATGATGAAAAGTCTGCTGAACCAACTTCATCTGATAAACTGGCCGGTGGGACTCTCATTCAAGGTGTTGGTGCTCCAAACAAAGTGAGATTTGAACTGCCAGGTGAGGCAGAACTTGCAGAAGATGCTGAGAGTTTGTTAGAAGGACTAGGTCCTCGTTTTTCGGATTGGTGGGGATATGACCCTCTACCTGTTGATGCGGATCTTCTTCCTGCTGTTGTTCCGGGATACCGTAAGCCATTCCGTCTTCTCCCATATGGAGTGAAGCCTAAGCTAACCAATGATGAAATGACCTCACTGAGGAGACTTTCTAGGCCTTTGCCATGCCATTTTGCATTGGGTCGTAATAGGAACCTTCAAGGGCTTGCTGCTTCCATTATCAAGCTGTGGGAAAAATGTGAGATAGCCAAAATTGCAGTGAAAAGAGGCGTACAGAACACAAACAGTGTGTTGATGGCTGAAGAGTTACAGCTGCTAACTGGAGGAACTTTGCTTTCCCGAGACAGGGAATTCATCGTCTTCTATAGAGGAAAGGATTTCCTGCCATTTGCTGTTTCTTCTGCAATCGAACAGCAACGGTACATTCGATTACAAAAAATGAAACAGATGGATAATGCACTATCTACAACGGTGCAGGAGAAGAAACTTGAGATAAATGAACGTGGTCCCACAAATGGAAGTCAGAGCATCACGGAGTGGAAAAGGGTTGTCTCAGAACAGAGAAAGCTGATATCATCTGAGACATCTATGAGAAAAACTACCATCAAGTTGTCCATTGCATTGGAAAAAAAAGCGAAAGCAGAGGAACTCTTAGCGAAGCTGGAGGAAGAAGAGATGCTTCGACAACCGGAAATAGATAAAGAGGGAATAACTGTGGAGGAAAGGTATATGCTGAAGAAGGTTGGCTTGAGAATGAAGCCTTTTCTACTACTCGGTAGAAGGGGCGTTTTTGATGGAACAGTTGAAAATATGCATCTTCACTGGAAGTATAGGGAACTTGTGAAAATAATTACTAATGAGAGAAGTTCTAAAACTGTTCATGATATTGCACGGACCTTAGAGGCAGAAAGTGGTGGAATTTTAGTTGCAGTTGAGAGAGTGAACAGGAGTTATGCTATCATTATATACCGTGGGAAGAATTACAAACGGCCTTCACGTTTAAGGCCTGAGACACTCTTGAATAAAAAAGAGGCATTGAAGCGATCTATAGAGGAACAACGTCGAAAGTCATTGAAGCTTCATGTTTTAAAGCTTACACAAAACGTTAAAGAATTGAAACTTCAATTGGATAAAGACAAGAAAGCAATTGGTATGGAGTCGATAAAGAAATCAACGTTTCAGCAGGGAAAAGAAGGGACAAACGAGATACAAACAGCTGGAAGTTTGAAATTAGATACTGATCCTGCCTGCCTCTCTCATGCAGAAGATAATGCTTGTTTGGAGGAGAATGAAGTGGCCATGGTCAAAGGGGGTAATGCAGCTCATACGAGTGGAACTGTCTGTTTGGAAACTTCAATAAACAGTCTACAAGCCACTCAAAGGGATAGTGATACCTTTTTAACATCTGATGGTGATCAGACTAATGCCGAACTGAAATCTTCGTCTGAACCGGTTGGGCAAGGAAACCACACAAAGGTGTCCATGGCTGAGAATGCTGCATTTGGAAGTTTTGAACCTCTATCAGTCGCTAATTGTTTGTCAGGAGAGAATAATTCTGGAACTTCAGATGCCGTGCATCTTATTGCTTTGAATAAGAAGATGAAGCCATCTGTTAGATTGGAAGAGGAAAAACTAGCAATGAGGATGAACCAANCGATGTGGATGAACCAACCAGGTCAGATTCCAGCCAGAGCGCCTCAACTCTCCAACAAAGAGAGGCTTCTTCTANCAATGAGGATGAACCAACCAGGTCAGATTCCTGCCAGAGCGCCTCAACTCTCCAACAAAGAGAGGCTTCTTCTACGAAGGCAAGCGCTCAAGATGAAAAAACGTCCCGTGCTTGCTGTAGGCAAGAGCAACATAATTACAGGAGTTGCAAAAGCAATCAAGCAACATTTTAAAAAACACTCTCTTGCTATAGTCAATGTCAAAGGCAGAGCCAAAGGAACATCAGTCCAGGAGATTGTTTTTAAGCTTGAGCATGCAACTGGTGCAGTTCTAGTCTCTCAGGAGCCCAGCAAAGTTATTCTTTACAGGGGTTGGGAGGAAGAAGATAAATCCCAAGATAGAAAACAAAGCAAGGGTGAAGCTCAACTCTCTATGTCTCCTGAACTCTTGGCAGCTATAAGGGTTGAATGTGGATTGCGGTGA

Protein sequence

SFTLKPLIDQSPPPFTFFSSQLHPTLISHPPKSNRFLLRCSAVDSDALPKSAIQRIADKLRSLGFTEQPPEPVSDPNAPSTPGEIFVPLPNQLXQRIADKLRSLGFTEQPPEPVSDPNAPSTPGEIFVPLPNQLPKYRVGHTIDSSWSTPENPVPEPGTGSAIKRFHIMRDELEKRKREDGVKQRKREERAPTLAELSLPEEELRRLQGIGIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLNMKRTHDLLERKTGGIVVWRSGSKIILYRGPNYVYPYFSDEILKHDASQGALLDSHSDDDGGNSETESTLSSINDEKSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELAEDAESLLEGLGPRFSDWWGYDPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNRNLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFYRGKDFLPFAVSSAIEQQRYIRLQKMKQMDNALSTTVQEKKLEINERGPTNGSQSITEWKRVVSEQRKLISSETSMRKTTIKLSIALEKKAKAEELLAKLEEEEMLRQPEIDKEGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSSKTVHDIARTLEAESGGILVAVERVNRSYAIIIYRGKNYKRPSRLRPETLLNKKEALKRSIEEQRRKSLKLHVLKLTQNVKELKLQLDKDKKAIGMESIKKSTFQQGKEGTNEIQTAGSLKLDTDPACLSHAEDNACLEENEVAMVKGGNAAHTSGTVCLETSINSLQATQRDSDTFLTSDGDQTNAELKSSSEPVGQGNHTKVSMAENAAFGSFEPLSVANCLSGENNSGTSDAVHLIALNKKMKPSVRLEEEKLAMRMNQXMWMNQPGQIPARAPQLSNKERLLLXMRMNQPGQIPARAPQLSNKERLLLRRQALKMKKRPVLAVGKSNIITGVAKAIKQHFKKHSLAIVNVKGRAKGTSVQEIVFKLEHATGAVLVSQEPSKVILYRGWEEEDKSQDRKQSKGEAQLSMSPELLAAIRVECGLR
BLAST of Cp4.1LG03g07840 vs. Swiss-Prot
Match: CFM2_ARATH (CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana GN=CFM2 PE=1 SV=1)

HSP 1 Score: 905.2 bits (2338), Expect = 6.9e-262
Identity = 535/1035 (51.69%), Postives = 690/1035 (66.67%), Query Frame = 1

Query: 89   LPNQLXQRIADKLRSLGFTEQPPEP-----VSDPNAPSTPGEIFVPLPNQLPKYRVGHTI 148
            LP    QRIA+KLRSLGF E+  +        + +  ++PGEIFVPLP QLP +RVGHTI
Sbjct: 55   LPQSAIQRIAEKLRSLGFVEEKHDSPTRRITGEESGKNSPGEIFVPLPKQLPIHRVGHTI 114

Query: 149  DSSWSTPENPVPEPGTGSAIKRFHIMRDELEKRKREDGVKQRKREERAPTLAELSLPEEE 208
            D+SWSTP  PVP+PG+G+AI R+H    EL++  +++   +RK+EE+ P+LAEL+LP  E
Sbjct: 115  DTSWSTPSYPVPKPGSGTAISRYH----ELKRVWKKETEMERKKEEKVPSLAELTLPPAE 174

Query: 209  LRRLQGIGIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLNMKRTHDLLE 268
            LRRL+ +GIRL +KLKIGKAG+TEGIVN IHE+WR +EVVKI CED+ R+NMKRTHD+LE
Sbjct: 175  LRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLE 234

Query: 269  RKTGGIVVWRSGSKIILYRGPNYVYPYF-SDEILKHDASQGALLDSHSDDDGGNSETEST 328
             KTGG+V+WRSGSKI+LYRG NY YPYF SD  L H+A+ GA   S  D    +S  + +
Sbjct: 235  TKTGGLVIWRSGSKILLYRGVNYQYPYFVSDRDLAHEAASGA---SSMDQGVVDSREKQS 294

Query: 329  LSSINDEKSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELAEDAESLLEGLGPRFSD 388
            ++     +S+ P+ ++K+    L QGVG+P+KVRF+LPGE +L E+A+ LLEGLGPRF+D
Sbjct: 295  IA-----ESSAPSITNKMVKPMLTQGVGSPDKVRFQLPGEVQLVEEADRLLEGLGPRFTD 354

Query: 389  WWGYDPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRN 448
            WW YDPLPVD DLLPAVVP YR+PFRLLPYGV PKLT+DEMT++RRL RPLPCHFALGRN
Sbjct: 355  WWAYDPLPVDGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGRN 414

Query: 449  RNLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFYR 508
            RNLQGLA +I+KLWEKCE+AKIAVKRGVQNTNS LMAEEL+ LTGGTL+SRD++FIV YR
Sbjct: 415  RNLQGLAVAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKWLTGGTLISRDKDFIVLYR 474

Query: 509  GKDFLPFAVSSAIEQQRY---------IRLQKMKQMDNALSTTVQEKKLEINERGPTNGS 568
            GKDFLP AVSSAIE++R          +   K+ + +  +     ++ +E+  +   +  
Sbjct: 475  GKDFLPSAVSSAIEERRRQTMIMENSSVHGNKLTENEEEIKPRAVKEDIELEAKDQKDHI 534

Query: 569  QSITEWKRVVSEQRKLISSETSMRKTTIKLSIALEKKAKAEELLAKLEEEEMLRQPEIDK 628
            Q+     ++ S QR   S E  + KT++KLS+ALEKKA AE++LA LE  E  +  +IDK
Sbjct: 535  QT----HQMKSRQRN--SPEAILEKTSMKLSMALEKKANAEKVLADLENRESPQLSDIDK 594

Query: 629  EGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSSKTVH 688
            EGIT +E+YML+K+GL+MKPFLLLGRRGVFDGT+ENMHLHWKYRELVKII NE S +  H
Sbjct: 595  EGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAAH 654

Query: 689  DIARTLEAESGGILVAVERVNRSYAIIIYRGKNYKRPSRLRPETLLNKKEALKRSIEEQR 748
             +A  LEAESGGILVAVE V++ YAII+YRGKNY+RP  LRP+TLL+K+EALKRS+E QR
Sbjct: 655  KVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREALKRSVEAQR 714

Query: 749  RKSLKLHVLKLTQNVKELKLQLDKDKKAIGMESIKKSTFQQGKEGTNEIQTAGSLKLDTD 808
            RKSLKLHVLKL+ N++EL  QL +D       S    T+  G+     ++       +T+
Sbjct: 715  RKSLKLHVLKLSNNIEELNRQLVED-------SATNETWSDGESSNMMVEE------ETE 774

Query: 809  PACLSHAEDNACLEENEVAMVKGGNAAHTSGTVCLETSINSLQATQRDSDTFLTSDGDQT 868
                 H E     E+ E+       +  +SG    E        ++ + D   TS  +  
Sbjct: 775  N---QHTEPEKAREKIELGY-SSDLSVPSSGEENWEDD------SEGEVDPLTTSSQEYQ 834

Query: 869  NAELKSSSEPVGQGNHTKVSMAENAAFGSFEPLSVANCLSGENNSGTSDAVHLIALNKKM 928
              E +S+S    +GN    S+   A    F     AN  S  + S   ++   +  N+K+
Sbjct: 835  EDESESASSQRHEGN----SLDSTANLSVFAETGSANASSFHDRSLPHNS--FLNANRKL 894

Query: 929  KPSVRLEEEKLAMRMNQXMWMNQPGQIPARAPQLSNKERLLLXMRMNQPGQIPARAPQLS 988
                                   PG       Q+S     L   +    G +      LS
Sbjct: 895  -----------------------PGSSTGSGSQIS----ALRERKSENDGLVT----DLS 954

Query: 989  NKERLLLRRQALKMKKRPVLAVGKSNIITGVAKAIKQHFKKHSLAIVNVKGRAKGTSVQE 1048
            N+ERL+LR+QALKMKKRP  AVG+SN++TG+A+ +K HF+K+ LAIVNVKGRA GTSVQE
Sbjct: 955  NRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSVQE 1011

Query: 1049 IVFKLEHATGAVLVSQEPSKVILYRGW--EEEDKS-QDRKQSKGEAQL-----------S 1095
            ++ KL+  TGA+LVSQEPSKVILYRGW  EEE KS       K    L            
Sbjct: 1015 VIAKLKEETGALLVSQEPSKVILYRGWGAEEEMKSFYPNNNVKSSINLPSTRSFVDDPPH 1011

BLAST of Cp4.1LG03g07840 vs. Swiss-Prot
Match: CFM3_ORYSJ (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CFM3 PE=3 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 5.0e-127
Identity = 344/937 (36.71%), Postives = 500/937 (53.36%), Query Frame = 1

Query: 19  SSQLHPTL-ISHPPKSNRFLLRCSAVDS----DALPKSAIQRIADKLRSLGFTEQP-PEP 78
           S  LH  L + HPP+ +R LL  S         A P +  +R+  +  +     +P P P
Sbjct: 11  SIHLHLHLHLHHPPRLHR-LLHLSTTSPYPWLSAWPTAHRRRVPLRRPASALDLRPEPSP 70

Query: 79  VSDPNAPSTPGEIFVPLPNQLXQRIADKLRSLGFTEQPPEPVSDPNAPSTPGEIFVPLPN 138
            SD +  +  G       + +   I  +LR+ G++  PPE    P   S   ++F     
Sbjct: 71  SSDSDDDAAFGTSRSSSRSAM-SLILSRLRNSGYSYSPPELPPRPPRGSVE-DVFRVDDG 130

Query: 139 QLPKYRVGHTIDSSWSTP------ENPVPEPGTGSAIKRFHIMRDELEKRKREDGVKQRK 198
            +P  R G   D+  +        E P+P P  G    R                     
Sbjct: 131 VVPNARGGFDDDAESALVDARFPWELPMPPPEAGPRAARSKAW----------------- 190

Query: 199 REERAPTLAELSLPEEELRRLQGIGIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIV 258
                  +AEL+LPE ELRRL+  G+RLK ++K+G AGVT  IV  I ++WR  EVV+I 
Sbjct: 191 -------MAELTLPEAELRRLRHAGMRLKSRIKVGGAGVTREIVERIRDRWRNDEVVRIK 250

Query: 259 CEDLCRLNMKRTHDLLERKTGGIVVWRSGSKIILYRGPNYVYPYFSDEILKHDASQGALL 318
                 LNM+  H++LERKTGG+V+WRSG+ + LYRG  Y  P  +    K+  + G + 
Sbjct: 251 VTGTPALNMRLFHEILERKTGGLVIWRSGTSVSLYRGVAYDIPEPTKGTSKNTQTLG-MK 310

Query: 319 DSHSDDDGGNSETESTLSSINDEKSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELA 378
            S  +  G +      ++ + D   A  ++++K    TL++ V    ++++E        
Sbjct: 311 SSIKEPPGHSLLPNEKVNEMQDNNGALVSNAEK---DTLVEPVP---EIKYE-------- 370

Query: 379 EDAESLLEGLGPRFSDWWGYDPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSL 438
           ++ + LL+ LGPR+ DW   DP PVDADLLPA VPGY+ PFR+LPYGV+P L+  + T+L
Sbjct: 371 DEIDKLLDELGPRYDDWPRPDPSPVDADLLPATVPGYKPPFRVLPYGVRPSLSRRDTTNL 430

Query: 439 RRLSRPLPCHFALGRNRNLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLT 498
           RRL+R LP HFALGR+R LQGLAA+++KLWEK  IAKIA+KRGVQ T S  MAE+++ LT
Sbjct: 431 RRLARGLPPHFALGRSRQLQGLAAAMVKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLT 490

Query: 499 GGTLLSRDREFIVFYRGKDFL-PFAVSSAIEQQRYIR-LQKMKQMD-NALST-------- 558
           GG +LSR+ +F+VFYRGKDFL P      +E++R+ + LQ  +Q   NA S+        
Sbjct: 491 GGVMLSRNNDFMVFYRGKDFLSPELAEKLLERERWAKSLQDEEQARLNAASSFSSRTEAP 550

Query: 559 ---TVQEKKLEINERGPTNGSQSITEWKRVVSEQRKLISSETSMRKTTIKLSIALEKKAK 618
              TV     E  E     G++    ++  ++   +       +RK   KL +A +K  K
Sbjct: 551 VEPTVAGTLGETLEANSKYGNKLDENYENKMTRTVEAARHADLVRKLEWKLQLAQKKIEK 610

Query: 619 AEELLAKLEEEEMLRQPEIDKEGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHL 678
           AE +L K+E      +     E IT EER+M +K+GLRMK FLLLGRRGVFDGT+ENMHL
Sbjct: 611 AERVLGKVETALKPTEGIQPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHL 670

Query: 679 HWKYRELVKIITNERSSKTVHDIARTLEAESGGILVAVERVNRSYAIIIYRGKNYKRPSR 738
           HWKYRELVKI+   +S   V  IA +LEAESGGILV+V++V++ YAI+++RGK+Y RPS+
Sbjct: 671 HWKYRELVKILVKAKSFGDVKKIALSLEAESGGILVSVDKVSKGYAIVVFRGKDYARPSK 730

Query: 739 LRPETLLNKKEALKRSIEEQRRKSLKLHVLKLTQNVKELKLQLDKDKKAIGMESIKKSTF 798
           LRP  LL+K++AL RSIE QRR++L  H+  L + VK+LK +L      + ME +K    
Sbjct: 731 LRPRNLLSKRKALARSIEIQRREALSHHIATLNRRVKKLKAEL------LQMEGVK---- 790

Query: 799 QQGKEGTNEIQTAGSLKLDTDPACLSHAEDNACLE--ENEVAMVKGGNAAHTSGTVCLET 858
              +EG  E+         +D   +   +D A L   +N VA+  G +           T
Sbjct: 791 ---EEGDVELYAKLDSAYSSDEEDVEDEDDEAYLRSFDNSVAVQNGDD----------RT 850

Query: 859 SINSLQATQRDSDTFLTSDGDQTNAELKSSSEPVGQGNHTKVSMAENAAFGSFEPLSVAN 918
           S++   A   D   +   D D+ +     + E  G          EN       P +   
Sbjct: 851 SLDGSDANSDDEGDYSDEDDDEDD----DNDEEDGFD-------YENDDEDDVPPTTSDG 871

Query: 919 CLSGENNSGTSDAVHLIALNKKMKPSVRLEEEKLAMR 928
            L    + G+SD+ + ++L+ +  P V+ +   L  R
Sbjct: 911 DLYNHTDFGSSDSENYVSLSGRGDPDVKSKGSALDSR 871

BLAST of Cp4.1LG03g07840 vs. Swiss-Prot
Match: CFM3_MAIZE (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays GN=CFM3 PE=1 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 1.0e-124
Identity = 314/807 (38.91%), Postives = 449/807 (55.64%), Query Frame = 1

Query: 97  IADKLRSLGFTEQPPEPVSDPNAP-STPGEIFVPLPNQLPKYRVGHTIDSS--------- 156
           I  +LR  G++ + P   + P+ P  +  ++F      LP  R G   D           
Sbjct: 83  ILSRLRRAGYSGEDPRAAAPPHPPRGSVEDVFRADDGVLPNARGGFDADDEERALGDARF 142

Query: 157 -WSTPENPVPEPGTGSAIKRFHIMRDELEKRKREDGVKQRKREERAPT-LAELSLPEEEL 216
            W   E P+P P                         +   R  R+PT +AEL+LP  EL
Sbjct: 143 PW---ERPMPPP-------------------------EAAPRSARSPTWMAELTLPAAEL 202

Query: 217 RRLQGIGIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLNMKRTHDLLER 276
           RRL+   IR+K + K+G AGVT  IV  I E+W+  EVV++       LNM+  H++LER
Sbjct: 203 RRLRHAAIRIKSRTKVGGAGVTREIVEKIKEKWKTEEVVRVKVSGTPALNMRLFHEILER 262

Query: 277 KTGGIVVWRSGSKIILYRGPNYVYPYFSDEILKHDASQGALLDSHSDDDGGNSETESTLS 336
           KTGG+V+WRSG+ + LYRG +Y  P  + +  K+  S           +     TE T +
Sbjct: 263 KTGGLVIWRSGTSVSLYRGVDYDEPEPTKKSKKNSQSLAMDFPIKGSSNPSLLPTE-TAN 322

Query: 337 SINDEKSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELAEDAESLLEGLGPRFSDWW 396
           S+ D   A  +++ K     L+  V AP ++++E        ++ + LL+ LGPR++DW 
Sbjct: 323 SVRDSNVALVSNAAK---EELV--VQAP-EIKYE--------DEIDKLLDELGPRYTDWP 382

Query: 397 GYDPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNRN 456
           G DPLPVDADLLPA +PGY+ PFR+LPYGV+P L+  + T+LRRL+R LP HFALGR+R 
Sbjct: 383 GSDPLPVDADLLPANMPGYKPPFRVLPYGVRPSLSRRDTTNLRRLARGLPPHFALGRSRQ 442

Query: 457 LQGLAASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFYRGK 516
           LQGLA +++KLWEK  IAKIA+KRGVQ T S  MAE+++ LTGG +LSR+ EFIVFYRGK
Sbjct: 443 LQGLANAMVKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGVMLSRNNEFIVFYRGK 502

Query: 517 DFLPFAVSSAI-EQQRYIRL--------QKMKQMDNALSTTVQE-------KKLEINER- 576
           DFL   ++  + E++R  +         +K     ++  T  Q        + LE N + 
Sbjct: 503 DFLSSELAEVLLERERLAKSLQDEEEARRKAASYFSSAETYAQPTVAGTLGETLEANSKY 562

Query: 577 GPTNGSQSITEWKRVVSEQRKLISSETSMRKTTIKLSIALEKKAKAEELLAKLEEEEMLR 636
           G  +      +  R +   R        +RK   KLS+A +K  KAE +L K+E      
Sbjct: 563 GTKHDENHADKMARTIEAARHA----DLVRKLEWKLSLAQKKMEKAERVLGKVETALRPT 622

Query: 637 QPEIDKEGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNER 696
           +     E IT EER+M +K+GLRMK FLLLGRRGVFDGT+ENMHLHWKYRELVKI+   +
Sbjct: 623 EDSRPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAK 682

Query: 697 SSKTVHDIARTLEAESGGILVAVERVNRSYAIIIYRGKNYKRPSRLRPETLLNKKEALKR 756
           S   V  IA +LEAESGGILV+V++V++ YAI+++RGKNY+RPS LRP  LL+K++AL R
Sbjct: 683 SFADVKRIALSLEAESGGILVSVDKVSKGYAIVVFRGKNYRRPSSLRPRNLLSKRKALAR 742

Query: 757 SIEEQRRKSLKLHVLKLTQNVKELKLQLDKDKKAIGMESIKKSTFQQGKEGTNEIQTAGS 816
           SIE QR ++L  H  KL + V+ LK +L      + ME +K       ++G  E+     
Sbjct: 743 SIELQRHQALSRHFAKLNRKVERLKAEL------VQMEDVK-------EQGDEELYAKLD 802

Query: 817 LKLDTDPACLSHAEDNACLE--ENEVAMVKGGNAAHTSGTVCLETSINSLQATQRDSDTF 873
               +D   +   +D A L+  +NEVA    G  A   G+    ++ +       D +  
Sbjct: 803 AAYSSDDEDMEDEDDEAYLKRFDNEVA----GATADDDGSDDYTSAADEADYPDSDDEAG 825

BLAST of Cp4.1LG03g07840 vs. Swiss-Prot
Match: CFM3A_ARATH (CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=CFM3A PE=2 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.1e-123
Identity = 279/688 (40.55%), Postives = 413/688 (60.03%), Query Frame = 1

Query: 95  QRIADKLRSLGFTEQPPEPVSDPNAPSTPG---EIFVPLPNQLPKYRVGHTIDSSWSTPE 154
           ++I +KL+  G+ E+      +       G   +IF     +LP  R G T + S    E
Sbjct: 120 EKIVEKLKKYGYMEEVQNKEIEQERRIEKGSVEDIFYVEEGKLPNTRGGFT-EESLLGGE 179

Query: 155 NPVPEPG-TGSAIKRFHIMRDELEKRKREDGVKQRKREERAPTLAELSLPEEELRRLQGI 214
           N +   G  G   ++         K K+E   +   ++E   +LAE++LPE ELRRL+ +
Sbjct: 180 NVIGSNGDVGFPWEKMSA------KEKKELEAEWTAKKENRYSLAEMTLPESELRRLRNL 239

Query: 215 GIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLNMKRTHDLLERKTGGIV 274
             R   K++I   GVT+  V+ I E+W+ +E+V++  E    LNM++ H++LE+KTGG+V
Sbjct: 240 TFRTASKMRIRGGGVTQVAVDAIKEKWKSAEIVRLKIEGASALNMRKMHEILEKKTGGLV 299

Query: 275 VWRSGSKIILYRGPNYVYPYFS-DEILKHDASQGALLDSHSDDDGGNSETESTLSSINDE 334
           +WRSG+ I LYRG +Y  P    ++  + +    A++++H +         +T+   +DE
Sbjct: 300 IWRSGTSISLYRGVSYELPSGKWNKQRREETPPEAVIENHDET--------TTMVDKSDE 359

Query: 335 KSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELAEDAESLLEGLGPRFSDWWGYDPL 394
           K   P    +    T ++     + V        E  ++ + LL+ LGPRF DW G +PL
Sbjct: 360 KVHLPQLEQET---TSVEKKDQTSPV-------VEYEDELDELLDDLGPRFMDWPGDNPL 419

Query: 395 PVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNRNLQGLA 454
           PVDADLLP  +P Y  PFR+LPYGV+  L   E T+LRRL+R +P HFALGR+R LQGLA
Sbjct: 420 PVDADLLPGAIPDYEPPFRVLPYGVRSSLGPKEATALRRLARSIPPHFALGRSRQLQGLA 479

Query: 455 ASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFYRGKDFLPF 514
            ++++LWEK  +AKIA+KRGVQ+T S  MAE+L+ LTGG +LSR+++F+VFYRGK+FL  
Sbjct: 480 TAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLKKLTGGIMLSRNKDFLVFYRGKNFLSR 539

Query: 515 AVSSA-IEQQRYIRL------QKMKQMDNALSTTVQEKKLEINERGPTNGSQSIT-EWKR 574
            V+ A +EQ+R++R       Q   +  +AL     E   ++   G    +   T +W +
Sbjct: 540 EVADALVEQERFVRTLQDEEEQARLRGSSALIVPSTEPANKLVSAGTLGETLDATGKWGK 599

Query: 575 ---------VVSEQRKLISSETSMRKTTIKLSIALEKKAKAEELLAKLEEEEMLRQPEID 634
                     V ++ +++  E  +RK   KL+ A  K  KAE  LAK+E      +   D
Sbjct: 600 NLDDDDHSDEVKQEVEILRHENLVRKLERKLAFAERKLLKAERGLAKVEVCLKPAEQRED 659

Query: 635 KEGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSSKTV 694
            E IT EER+M +K+GL+MK FLLLGRRGVFDGTVENMHLHWKYRELVKII   ++   V
Sbjct: 660 PESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGV 719

Query: 695 HDIARTLEAESGGILVAVERVNRSYAIIIYRGKNYKRPSRLRPETLLNKKEALKRSIEEQ 754
             +A  LEAESGGILV++++V + YAII+YRG++YKRP+ LRP+ LL K++AL RSIE Q
Sbjct: 720 KKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRKALARSIELQ 779

Query: 755 RRKSLKLHVLKLTQNVKELKLQLDKDKK 761
           RR+ L  H+  +    K+L+ ++++ +K
Sbjct: 780 RREGLLKHISTMQAKAKQLRAEIEQMEK 782

BLAST of Cp4.1LG03g07840 vs. Swiss-Prot
Match: CFM3B_ARATH (CRM-domain containing factor CFM3B, chloroplastic OS=Arabidopsis thaliana GN=CFM3B PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.6e-107
Identity = 254/648 (39.20%), Postives = 372/648 (57.41%), Query Frame = 1

Query: 173 LEKRKREDGVKQRKREERAPTLAELSLPEEELRRLQGIGIRLKRKLKIGKAGVTEGIVNT 232
           +EK++  +G    K+E R  +LAE++L E EL RL+ +  R K K+++  AGVT+ +V+ 
Sbjct: 197 MEKKELVNGEWTAKKESRY-SLAEMTLSEFELNRLRNVMFRTKSKMRVTGAGVTQAVVDA 256

Query: 233 IHEQWRRSEVVKIVCEDLCRLNMKRTHDLLERKTGGIVVWRSGSKIILYRGPNYVYPYFS 292
           I E+W+ SE+V++  E    LNM+R H++LERKTGG+V+WRSG+ I LY   NY      
Sbjct: 257 IQEKWKGSEIVRLKIEGSSALNMRRMHEILERKTGGLVIWRSGTSIALY---NY------ 316

Query: 293 DEILKHDASQGALLDSHSDDDGGNSETESTLSSINDEKSAEPTSSDKLAGGTLIQGVGAP 352
                            S+ DG  +  +          S+ PTS+   +    +Q V  P
Sbjct: 317 --------------KGGSNRDGSGNMNKQVYRRAERLPSSLPTSTVDQS----VQLVNLP 376

Query: 353 ----------NKVRFELPGEAELAEDAESLLEGLGPRFSDWWGYDPLPVDADLLPAVVPG 412
                     NK R   P E E  ++   LLEGLGPR++DW G  PLPVDADLLP +VPG
Sbjct: 377 QLEKEPTVVGNKDRTS-PQEVEYEDEINELLEGLGPRYTDWQGGYPLPVDADLLPGIVPG 436

Query: 413 YRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNRNLQGLAASIIKLWEKCEIA 472
           Y  PFR LPYGV+  L   E TSLRR++  LP HFALGR+R LQGLA +++KLW+K  IA
Sbjct: 437 YEPPFRALPYGVRSTLGTKEATSLRRIATVLPPHFALGRSRQLQGLATAMVKLWQKSLIA 496

Query: 473 KIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFYRGKDFLPFAVSSAI------- 532
           K+A+KRGVQ T S  MAE+++ LTGG LLSR+++F+VFYRGK FL   V  A+       
Sbjct: 497 KVALKRGVQLTTSERMAEDIKRLTGGMLLSRNKDFLVFYRGKSFLSLEVGEALMEKEMLV 556

Query: 533 ----EQQRYIRLQKMKQM-------DNALSTTVQEKKLEINERGPTNGSQSITEWKRVVS 592
               +++   RL+    +       +  L+ T+Q+K+ +         S           
Sbjct: 557 RTLQDEEEQARLRASSALVVPSIKANQQLARTLQDKEEQARPSALVLPS---------TK 616

Query: 593 EQRKLISSET--SMRKTTIKLSIALEKKAKAEEL---LAKLEEEEMLRQPE-----IDKE 652
             + L+S+ T       T K    L+     EE+   + K+   +++R+ E      +K+
Sbjct: 617 ANQNLVSAGTLGETLDATGKWGKNLDNDDHVEEMKQEVEKVRSAKLVRKLERKLAFAEKK 676

Query: 653 GITVE-------------------------ERYMLKKVGLRMKPFLLLGRRGVFDGTVEN 712
            +  E                         ER+M +K+GL+MK FLLLGRRGVFDGTVEN
Sbjct: 677 LLKAERALAKVEESLKPAEQRTDLEGITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVEN 736

Query: 713 MHLHWKYRELVKIITNERSSKTVHDIARTLEAESGGILVAVERVNRSYAIIIYRGKNYKR 758
           MHLHWKYREL+KI+   ++ +    +A  LEAESGGILV+V+++++ YA+I+YRGK+YKR
Sbjct: 737 MHLHWKYRELIKILVKAKTLEGAQKVAMALEAESGGILVSVDKISKGYAVIVYRGKDYKR 796

BLAST of Cp4.1LG03g07840 vs. TrEMBL
Match: A0A0A0LC83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G829150 PE=4 SV=1)

HSP 1 Score: 1486.9 bits (3848), Expect = 0.0e+00
Identity = 791/1009 (78.39%), Postives = 863/1009 (85.53%), Query Frame = 1

Query: 89   LPNQLXQRIADKLRSLGFTEQPPEPVSDPNAPSTPGEIFVPLPNQLPKYRVGHTIDSSWS 148
            LP    QRIADKLRSLGFTE PPEP+ DPN+PS PG IFVPLPNQLPKYRVGHTIDSSWS
Sbjct: 54   LPKSAIQRIADKLRSLGFTESPPEPLPDPNSPSAPGAIFVPLPNQLPKYRVGHTIDSSWS 113

Query: 149  TPENPVPEPGTGSAIKRFHIMRDELEKRKREDGVKQRKREERAPTLAELSLPEEELRRLQ 208
             PENPVPEPGTG+AIKRFH +R E++K K+ DGV+++KREERAP+LAELSL EEEL RL+
Sbjct: 114  MPENPVPEPGTGTAIKRFHELRGEVQKWKKRDGVREKKREERAPSLAELSLTEEELGRLR 173

Query: 209  GIGIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLNMKRTHDLLERKTGG 268
             IGIRLK+KL +GKAG+TEGIVNTIHE WRRSEVVKI CEDLCRLNMKRTHDLLERKTGG
Sbjct: 174  TIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVVKIACEDLCRLNMKRTHDLLERKTGG 233

Query: 269  IVVWRSGSKIILYRGPNYVYPYFSDEILKHDASQGALLDSHSDDDGGNSETESTLSSIND 328
            IVVWRSGSKIILYRGPNY+YPYFS EIL+ + SQ AL  SHSDD GGNSETESTLS IND
Sbjct: 234  IVVWRSGSKIILYRGPNYIYPYFSHEILEDEGSQDALPASHSDD-GGNSETESTLSCIND 293

Query: 329  EKSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELAEDAESLLEGLGPRFSDWWGYDP 388
            E+SA PTSS K+   TLIQGVGAPN+VRF+LPGEAELAEDAESLLEGLGPRFSDWWGYDP
Sbjct: 294  ERSAGPTSSVKMPSPTLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDP 353

Query: 389  LPVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNRNLQGL 448
            LPVDADLLPA+VPGYRKPFRLLPYGVKPKLTNDEMTSLRRL+RPLPCHFALGRNR LQGL
Sbjct: 354  LPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGL 413

Query: 449  AASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFYRGKDFLP 508
            AASII+LWEKCEIAKIAVKRG              LLTGGTLLSRDREFIV YRGKDFLP
Sbjct: 414  AASIIQLWEKCEIAKIAVKRG--------------LLTGGTLLSRDREFIVLYRGKDFLP 473

Query: 509  FAVSSAIEQQRYIRLQKMKQMDNALSTTVQEKKLEINERGPTNGSQSITEWKRVVSEQRK 568
            FAVSSA+EQ+R++RL +MKQ DN+ +TT Q  KLEINE GPTN SQSIT WK++VSE+RK
Sbjct: 474  FAVSSAMEQKRHMRLHEMKQTDNSPATTGQGLKLEINENGPTNESQSITGWKKIVSERRK 533

Query: 569  LISSETSMRKTTIKLSIALEKKAKAEELLAKLEEEEMLRQPEIDKEGITVEERYMLKKVG 628
            L+SSETSMRKT+IKLSIALEKKAKAEE LAKLEEEE L+QPEIDKEGITVEERYMLKKVG
Sbjct: 534  LMSSETSMRKTSIKLSIALEKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKKVG 593

Query: 629  LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSSKTVHDIARTLEAESGGILV 688
            LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERS KTVHD+ARTLEAESGGILV
Sbjct: 594  LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGILV 653

Query: 689  AVERVNRSYAIIIYRGKNYKRPSRLRPETLLNKKEALKRSIEEQRRKSLKLHVLKLTQNV 748
            AVERV RS+AIII+RGKNYKRPSRLRPE+LLNKKEALKRSIE QRRKSLKLHVLKLTQNV
Sbjct: 654  AVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSLKLHVLKLTQNV 713

Query: 749  KELKLQLDKDKKAIGMESIKKSTFQQGKEGTNEIQTAGSLKLDTDPACLSHAEDNACLEE 808
            +ELKL+LD+DK+AIGMESIK STFQQGKEG +EIQT GSLKL  D ACL+HAE++ CLEE
Sbjct: 714  EELKLKLDEDKRAIGMESIKTSTFQQGKEGIDEIQTTGSLKLVADSACLTHAENSTCLEE 773

Query: 809  NEVAMVKGGNAAHTSGTVCLETSINSLQATQRDSDTFLTSDGDQTNAELKSSSEPVGQGN 868
            NEVA VK G+  H+SGT+CL+TS+N LQ T   +D FL  +GDQ+NA ++ S E V QGN
Sbjct: 774  NEVAKVKKGHGTHSSGTICLDTSVNRLQTT---NDVFLIHNGDQSNATVRPSFESVRQGN 833

Query: 869  HTKVSMAENAAFGSFEPLSVANCLSGENNSGTSDAVHLIALNKKMKPSVRLEEEKLAMRM 928
            H KV M  NA FG+ EP S AN LSGE+NSGTSDAVH +A+NK  KPSVRLEEEK     
Sbjct: 834  HAKVPMDTNAEFGTIEPQSGANSLSGESNSGTSDAVHHVAMNKDTKPSVRLEEEK----- 893

Query: 929  NQXMWMNQPGQIPARAPQLSNKERLLLXMRMNQPGQIPARAPQLSNKERLLLRRQALKMK 988
                                    LL   R+NQPG  PA  PQLSNKERLLLRRQALKMK
Sbjct: 894  ---------------------SPPLLSSTRINQPGYFPANVPQLSNKERLLLRRQALKMK 953

Query: 989  KRPVLAVGKSNIITGVAKAIKQHFKKHSLAIVNVKGRAKGTSVQEIVFKLEHATGAVLVS 1048
            K PVL+VGKSN+ITGVAKAIK+HFKKHSLAIVNVKGRAKGTSVQEIVFKLE ATGAVLVS
Sbjct: 954  KLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATGAVLVS 1013

Query: 1049 QEPSKVILYRGWEEEDKSQDRKQSK--GEAQLSMSPELLAAIRVECGLR 1096
            QEPSKVILYRGWEEED+ Q     K  GE +LSMS EL+AAIR+ECGLR
Sbjct: 1014 QEPSKVILYRGWEEEDRKQKATMMKNSGEDRLSMSSELMAAIRIECGLR 1018

BLAST of Cp4.1LG03g07840 vs. TrEMBL
Match: F6HV32_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g01910 PE=4 SV=1)

HSP 1 Score: 999.2 bits (2582), Expect = 3.9e-288
Identity = 588/1027 (57.25%), Postives = 721/1027 (70.20%), Query Frame = 1

Query: 89   LPNQLXQRIADKLRSLGFT---EQPPEPVSDPNAPSTPGEIFVPLPNQLPKYRVGHTIDS 148
            LP    QRIA+KLRSLG+    E      SD  A  + GEIFVPLPNQLPK+RVGHTID 
Sbjct: 77   LPKTAIQRIAEKLRSLGYVDGDESRKVLSSDKPANGSAGEIFVPLPNQLPKHRVGHTIDQ 136

Query: 149  SWSTPENPVPEPGTGSAIKRFHIMRDELEKRKREDGVKQRKREERAPTLAELSLPEEELR 208
            SWS PENPVPEPGTG  I RFH +R E+++ K+      RK +ERAPTLAEL+LPEEELR
Sbjct: 137  SWSLPENPVPEPGTGGVITRFHELRKEVKREKK----LVRKEDERAPTLAELTLPEEELR 196

Query: 209  RLQGIGIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLNMKRTHDLLERK 268
            RL+GIGI++++KLK+GKAG+TEGIVN IHE+WRR+EVVKI CED+C+LNMKRTHD+LERK
Sbjct: 197  RLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERK 256

Query: 269  TGGIVVWRSGSKIILYRGPNYVYPYF-SDEILKHDASQGALLDSHSDDDGGNSETESTLS 328
            TGG+V+WRSGS IILYRG NY YPYF SD  L +D+S  A  DS  +++  + + E   S
Sbjct: 257  TGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGK-EVCSS 316

Query: 329  SINDEKSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELAEDAESLLEGLGPRFSDWW 388
               D KSA P  ++K+A  +LIQGVG P +VRF+LPGEA+L E+A+ LL+GLGPRF+DWW
Sbjct: 317  GKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWW 376

Query: 389  GYDPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNRN 448
            GYDPLP+DADLLPAVVPGYR+PFRLLPYG+KPKLTNDEMT LRRL RPLPCHFALGRNR 
Sbjct: 377  GYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRK 436

Query: 449  LQGLAASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFYRGK 508
            LQGLAAS+IKLWEKCEIAKIAVKRGVQNTNS +MAEEL+ LTGGTLLSRDREFIVFYRGK
Sbjct: 437  LQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGK 496

Query: 509  DFLPFAVSSAIEQQRYIRLQKMKQM--DNALSTTVQEKKLEINERGPTNGSQSITEWK-R 568
            DFLP AVSSAIE +R   + + KQ    + L+   +E +L  +E           + K  
Sbjct: 497  DFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESELGTSEHASDKDCDGTDDQKTN 556

Query: 569  VVSEQRKLISSETSMRKTTIKLSIALEKKAKAEELLAKLEEEEMLRQPEIDKEGITVEER 628
             +S++R L S+E  + +T IKLS+ALEKK +AE+LLA+LEE ++ +QPEIDKEGIT EER
Sbjct: 557  SLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEER 616

Query: 629  YMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSSKTVHDIARTLEA 688
            YML+KVGLRMKPFLLLGRRG+FDGTVENMHLHWKYRELVKII+N RS + +H +ARTLEA
Sbjct: 617  YMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEA 676

Query: 689  ESGGILVAVERVNRSYAIIIYRGKNYKRPSRLRPETLLNKKEALKRSIEEQRRKSLKLHV 748
            ESGGILVAVERV++ YAII+YRGKNYKRP+ LRP+TLLNK+EALKRS+E QRR+SLKLHV
Sbjct: 677  ESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKLHV 736

Query: 749  LKLTQNVKELKLQLDKDKKAIGMESIKKSTFQQGKEG-TNEIQTAGSLKLDTDPACLSHA 808
            L+LT+                 ++ +K     + K+  TN  Q     +L      L+  
Sbjct: 737  LRLTR----------------NIDELKHQLVSRIKDKETNSKQLVDKSRLH-----LARE 796

Query: 809  EDNACLEENEVAMVKGGNAAHTSGTVCLETSINSLQATQRDSDTFLTSDGDQTNAELKSS 868
               A     +V ++   +   +S    L+TS N  +    D  +   SD D+ N E   S
Sbjct: 797  RYGA-----DVILIHSSDGMDSSRD-SLQTSHNDKRI---DFPSMCDSDTDEANPE--PS 856

Query: 869  SEPVGQGNHTKVSMAENAAFGSFEPLSVANCLSGENNSGTSDAVHLIALNKKMKPSVRLE 928
            SE V +   T V    N      E      C     + G +    ++   + M+ SV+  
Sbjct: 857  SESVLKEIETNVLTDMN------EEGECTTCSEDLVSQGETSCYAIVNHEETMESSVKSS 916

Query: 929  EEKLAMRMNQXMWMNQPGQIPARAPQLSNKERLLLXMRMNQPGQIPARAPQLSNKERLLL 988
            + +             P Q P                   +  ++P RA  LSN+ERLLL
Sbjct: 917  KNEF----------KPPVQRPVDT----------------RSNEMPFRAAPLSNRERLLL 976

Query: 989  RRQALKMKKRPVLAVGKSNIITGVAKAIKQHFKKHSLAIVNVKGRAKGTSVQEIVFKLEH 1048
            R+QAL+MKKRPV+AVG+SNI+TGVAK IK HF+KH LAIVNVKGRAKGTSVQE++FKLE 
Sbjct: 977  RKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQ 1034

Query: 1049 ATGAVLVSQEPSKVILYRGW---EEE------DKSQDRKQS---KGEAQLSMSPELLAAI 1096
            ATGAVLVSQEPSKVILYRGW   EE       ++S  RK S   +G  + ++SPEL AAI
Sbjct: 1037 ATGAVLVSQEPSKVILYRGWGAREENGRSYRMNRSDARKTSAGREGGPRPTVSPELRAAI 1034

BLAST of Cp4.1LG03g07840 vs. TrEMBL
Match: A0A061ED06_THECC (CRM family member 2, putative isoform 2 OS=Theobroma cacao GN=TCM_016808 PE=4 SV=1)

HSP 1 Score: 997.3 bits (2577), Expect = 1.5e-287
Identity = 579/1023 (56.60%), Postives = 740/1023 (72.34%), Query Frame = 1

Query: 89   LPNQLXQRIADKLRSLGFTE-QPPEPVSDPNAPS-TPGEIFVPLPNQLPKYRVGHTIDSS 148
            LP    QRIADKLRSLGF+E Q PEP S+P + S +PGEIFVPLP ++PKYRVGHTID+S
Sbjct: 57   LPQSAIQRIADKLRSLGFSETQNPEPESEPGSGSDSPGEIFVPLPEKIPKYRVGHTIDTS 116

Query: 149  WSTPENPVPEPGTG--SAIKRFHIMRDELEKRKREDGVKQRKREERA-PTLAELSLPEEE 208
            WSTPENPVP+PG+G  S + RF  M+ E  K      V + K E+RA P+LAEL L   E
Sbjct: 117  WSTPENPVPDPGSGPGSLMARFREMKRERRK------VGRVKEEDRAVPSLAELKLSAAE 176

Query: 209  LRRLQGIGIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLNMKRTHDLLE 268
            LRRL+ +GI  KRKLK+GKAG+TEGIVN IHE+WRRSEVVKIVCED+C++NMKRTH++LE
Sbjct: 177  LRRLRTVGIGEKRKLKLGKAGITEGIVNGIHERWRRSEVVKIVCEDICKMNMKRTHEVLE 236

Query: 269  RKTGGIVVWRSGSKIILYRGPNYVYPYF-SDEILKHDASQGALLDSHSDDDGGNSETEST 328
            RKTGG+VVWRSGSKIILYRG NY YPYF +D+I   D S  A  D++ D+   + ETES 
Sbjct: 237  RKTGGLVVWRSGSKIILYRGANYRYPYFLADKIATDDTSSNASPDTNMDNVELH-ETESC 296

Query: 329  LSSINDEKSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELAEDAESLLEGLGPRFSD 388
             S IN  K+A P +++K+    ++QGVG+P++VRF+LPGEAEL E+A  LL+GLGPRF+D
Sbjct: 297  SSEINSAKTAIPNATNKMTKPMIVQGVGSPSRVRFQLPGEAELVEEANHLLDGLGPRFTD 356

Query: 389  WWGYDPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRN 448
            WWGY+PLPVD DLLPA++PGYR+PFRLLPYGVKP LTNDEMT+LRRL RPLPCHF LGRN
Sbjct: 357  WWGYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKPILTNDEMTTLRRLGRPLPCHFVLGRN 416

Query: 449  RNLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFYR 508
            R LQGLAASI+K WEKCEIAK+AVKRGVQNTNS LMAEEL+ LTGGTLLSRD++FIV YR
Sbjct: 417  RKLQGLAASIVKHWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYR 476

Query: 509  GKDFLPFAVSSAIEQQR--YIRLQKMKQMDNALSTTVQEKKLEINERGPTNGSQSITEWK 568
            GKDFLP AVSSAIE++R   I ++K     +    T QE  +E  + G  +   S  + +
Sbjct: 477  GKDFLPSAVSSAIEERRRHVIHVEKQGAECSKSKKTAQEVIVEDTKSGSESKINSAKDQR 536

Query: 569  -RVVSEQRKLISSETSMRKTTIKLSIALEKKAKAEELLAKLEEEEMLRQPEIDKEGITVE 628
                 + + + S+E ++RKT +KLS+ALEKKAKAE+LLA+LE+ E+ +Q EIDKEGIT E
Sbjct: 537  SNFFGDPKNMKSAEAAIRKTDVKLSMALEKKAKAEKLLAELEQAEIPQQSEIDKEGITQE 596

Query: 629  ERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSSKTVHDIARTL 688
            ERYML+KVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKII+ E + + VH +AR L
Sbjct: 597  ERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKETNVEAVHQLARML 656

Query: 689  EAESGGILVAVERVNRSYAIIIYRGKNYKRPSRLRPETLLNKKEALKRSIEEQRRKSLKL 748
            EAESGGILVAVERV++ YAII+YRGKNY+RP+ LRP+TLL K++A+KRS+EEQRRKSLKL
Sbjct: 657  EAESGGILVAVERVSKGYAIIVYRGKNYERPTSLRPQTLLTKRQAMKRSLEEQRRKSLKL 716

Query: 749  HVLKLTQNVKELKLQLDKDKKAIGMESIKKSTFQQGKEGTNEIQTAGSLKLDTDPACLSH 808
            H+L LT+NV +L+ QL  DK+A  M+++++S+    +E   E++T  S++  T       
Sbjct: 717  HILNLTRNVNDLEHQLVVDKEANSMQTVEQSSLPLVQE---ELETLQSVEY-TGSVIECP 776

Query: 809  AEDNACLEENEVAMVKGGNAAHTSGTVCLETSINSLQATQRD-SDTFLTSDGDQTN-AEL 868
            A     +E  +    K G+ + +     +  +I+  Q ++++  +     DG + +  E 
Sbjct: 777  ASSGGHVESRD----KDGSESTSMKNDKMVATISIRQPSKQEFMEPSSIHDGFENHKTES 836

Query: 869  KSSSEPVGQGNHTKVSMAENAAFGSFEPLSVANCLSGENNSGTSDAVHLIALNKKMKPSV 928
            + S+E V + +H     A +      +     N +   ++SG  +A H ++ N  M+  V
Sbjct: 837  EFSAESVNRKSHATELRALHTQVEMVDTSYPDNLMEEIDDSGAINAEHGVSNNGPMESLV 896

Query: 929  RLEEEKLAMRMNQXMWMNQPGQIPARAPQLSNKERLLLXMRMNQPGQIPARAPQLSNKER 988
                E  +M             I +    +SNK              + + A  LSNK+R
Sbjct: 897  ----ESASML---------DVSISSAVENVSNK--------------MASTANFLSNKDR 956

Query: 989  LLLRRQALKMKKRPVLAVGKSNIITGVAKAIKQHFKKHSLAIVNVKGRAKGTSVQEIVFK 1048
            LLLR+QALKMKKRPVLAVG+SNI+TGVAKAI+ HF+KH LAIVNVKGRAKGTSVQE+V K
Sbjct: 957  LLLRKQALKMKKRPVLAVGRSNIVTGVAKAIRAHFQKHPLAIVNVKGRAKGTSVQEVVLK 1016

Query: 1049 LEHATGAVLVSQEPSKVILYRGWEEEDK-----SQDRKQSKGEAQLSMSPELLAAIRVEC 1096
            L+ ATGAVLVSQEPSKVILYRGW   D+     +++ K S  + + ++SPEL+AAIR+EC
Sbjct: 1017 LQEATGAVLVSQEPSKVILYRGWGAGDELGRGDNRNAKDSLAQNRPAVSPELIAAIRLEC 1037

BLAST of Cp4.1LG03g07840 vs. TrEMBL
Match: M0ZLU8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001391 PE=4 SV=1)

HSP 1 Score: 990.7 bits (2560), Expect = 1.4e-285
Identity = 571/1039 (54.96%), Postives = 732/1039 (70.45%), Query Frame = 1

Query: 89   LPNQLXQRIADKLRSLGFTEQPPEPVSDPNAPST------PGEIFVPLPNQLPKYRVGHT 148
            LP    +RIADKLRSLGF E+P    +  NA S+      PG+IFVPLP QLPKYRVGHT
Sbjct: 56   LPESAIRRIADKLRSLGFVEEPKNQETQENALSSNPTANSPGQIFVPLPTQLPKYRVGHT 115

Query: 149  IDSSWSTPENPVPEPGTGSAIKRFHIMRDELEKRKREDGVKQRK-REERAPTLAELSLPE 208
            +D+SWSTPENPVP+PG G++I++FH +RDE  K K ++ +K ++ ++ERAP+LAEL+LP 
Sbjct: 116  LDTSWSTPENPVPQPGLGNSIQKFHELRDEFLKEKEKERLKNKEYKKERAPSLAELTLPA 175

Query: 209  EELRRLQGIGIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLNMKRTHDL 268
            EELRRL+ +GI L++KLKIGKAG+TEGIVN IHE+WRR E+VKI CED+CRLNMKRTH+L
Sbjct: 176  EELRRLRTVGIALRKKLKIGKAGITEGIVNGIHERWRRMELVKITCEDICRLNMKRTHEL 235

Query: 269  LERKTGGIVVWRSGSKIILYRGPNYVYPYFSDEILKHDASQGALLDSHSDDDGGNSETES 328
            LE+KTGG+V+WRSGS IILYRG +Y YPYFS+   +++++Q A  D           TE 
Sbjct: 236  LEKKTGGLVIWRSGSNIILYRGADYKYPYFSEISFENNSAQDATPDLFMG-------TEE 295

Query: 329  TLSSINDEKSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELAEDAESLLEGLGPRFS 388
             +++ +     +P +SD+ +   +IQGVG+P++VRFELPGEAE  E+A+ LLEGLGPRF+
Sbjct: 296  HMTNSSGTDVVKPDASDRKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEGLGPRFT 355

Query: 389  DWWGYDPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGR 448
            DWWG +PLP+DADLLPA+VPGY++PFRLLPYGVKPKLTNDEMT+LRRL RPLPCHF LGR
Sbjct: 356  DWWGCEPLPIDADLLPAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFVLGR 415

Query: 449  NRNLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFY 508
            NR LQGLAA+I+KLWEKCEIAK+AVKRGVQNTNS LMAEEL+ LTGGTLLSRDREFIVFY
Sbjct: 416  NRKLQGLAAAIVKLWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDREFIVFY 475

Query: 509  RGKDFLPFAVSSAIEQQRYIRLQKMKQMDNALSTTVQEKKLEINERGPTNGSQSITEWKR 568
            RGKDFLP AVSSAIE++R    ++ K+  N  +++V   K     +  T GS S     R
Sbjct: 476  RGKDFLPSAVSSAIEERRKQVFEEEKR--NGFNSSVANAK---ERKQSTTGSVSDDGHAR 535

Query: 569  -----VVSEQRKLISSETSMRKTTIKLSIALEKKAKAEELLAKLEEEEMLRQPEIDKEGI 628
                  V E++KL S E ++++T  KL+ ALEKKA+AE LL +LEE+E+ +Q ++DKEGI
Sbjct: 536  RNNQKGVQEKKKLTSMEAAIKRTADKLTTALEKKAEAENLLLELEEDEVPQQSDMDKEGI 595

Query: 629  TVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSSKTVHDIA 688
            T EER+ML+K+GLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVK+IT  ++ + VH IA
Sbjct: 596  TEEERFMLRKIGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVITGRKTIEEVHQIA 655

Query: 689  RTLEAESGGILVAVERVNRSYAIIIYRGKNYKRPSRLRPETLLNKKEALKRSIEEQRRKS 748
            R LEAESGGILVAVE VN+ +AII+YRGKNY+RP+ LRP+TLL+K+EA+KRSIE QRR+S
Sbjct: 656  RMLEAESGGILVAVELVNKGHAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQS 715

Query: 749  LKLHVLKLTQNVKELKLQLDKDKKAIGMES-------IKKSTFQQGKEGTNEIQTAGSLK 808
            LKLHVLKLTQN++ L+ +L K+++ + ++S       +  +       GTN   ++ S  
Sbjct: 716  LKLHVLKLTQNIEALQSRLAKNEEMVHIQSPDIVDRQVPVTGISDAAGGTNYQSSSASPT 775

Query: 809  LDTDPACLSHAEDNACLEENEVAMVKGGNAAHTSGTVCLETSINSLQATQRDS----DTF 868
             D+  A    AED     + E++                +T  NS Q    D     +  
Sbjct: 776  EDSGDA----AEDTDPSSQKELSSDSS------------DTDHNSQQEFPIDPFFQYEGK 835

Query: 869  LTSDGDQTNAELKSSSEPVGQGNHTKVSMAENAAFGSFEPLSVANCLSGENNSGTSDAVH 928
            + + GD    E +S S      +   V++ +   FGS    SV+    GE        +H
Sbjct: 836  VEAVGDTIQPEHQSISSIKESKSMFNVNV-DQKTFGSAVSESVSKSSRGEVK------IH 895

Query: 929  LIALNKKMKPSVRLEEEKLAMRMNQXMWMNQPGQIPARAPQLSNKERLLLXMRMNQPGQI 988
                    KP   ++++K            +  Q+P+  PQ     + L   R    G +
Sbjct: 896  FSETRSFNKPR-EVDDKK------------EVSQLPSVKPQ-----QALRSTRSRSEG-M 955

Query: 989  PARAPQLSNKERLLLRRQALKMKKRPVLAVGKSNIITGVAKAIKQHFKKHSLAIVNVKGR 1048
            P R  QLSN+ERLLLR+QALKMKK+PVLAVG+SNI+TGVAK IK+HFKK+ LAIVNVKGR
Sbjct: 956  PTRKVQLSNRERLLLRKQALKMKKQPVLAVGRSNIVTGVAKNIKEHFKKYPLAIVNVKGR 1015

Query: 1049 AKGTSVQEIVFKLEHATGAVLVSQEPSKVILYRGW---------EEEDKSQDRKQSKGEA 1096
            AKGTSV+E+VFKLE ATGAVLVSQEPSKVILYRGW            D    R   + + 
Sbjct: 1016 AKGTSVREVVFKLEQATGAVLVSQEPSKVILYRGWGPGGERGASNGNDTRNSRNSREQKE 1040

BLAST of Cp4.1LG03g07840 vs. TrEMBL
Match: K4BBN2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 984.9 bits (2545), Expect = 7.7e-284
Identity = 574/1036 (55.41%), Postives = 728/1036 (70.27%), Query Frame = 1

Query: 89   LPNQLXQRIADKLRSLGFTEQPPEPVSDPNAPST------PGEIFVPLPNQLPKYRVGHT 148
            LP    +RIADKLRSLGF EQP    +  NA S+      PG+IFVPLP QLPKYRVGHT
Sbjct: 268  LPESAIRRIADKLRSLGFVEQPKNQETQENALSSNPTANSPGQIFVPLPTQLPKYRVGHT 327

Query: 149  IDSSWSTPENPVPEPGTGSAIKRFHIMRDELEKRKREDGVKQRK-REERAPTLAELSLPE 208
            +D+SWSTPENPVP+PG G +I++FH +RDE  K K ++ +K ++ ++ERAP+LAEL+LP 
Sbjct: 328  LDTSWSTPENPVPQPGLGKSIQKFHELRDEFLKEKDKERLKNKEYKKERAPSLAELTLPA 387

Query: 209  EELRRLQGIGIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLNMKRTHDL 268
            EELRRL+ +GI L++KLKIGKAG+TEGIVN IHE+WRR E+VKI CED+CRLNMKRTH+L
Sbjct: 388  EELRRLRTVGIALRKKLKIGKAGITEGIVNGIHERWRRIELVKITCEDICRLNMKRTHEL 447

Query: 269  LERKTGGIVVWRSGSKIILYRGPNYVYPYFSDEILKHDASQGALLDSHSDDDGGNSETES 328
            LE+KTGG+V+WRSGS IILYRG +Y YPYFS+   +++++Q    D++ D   G  E  +
Sbjct: 448  LEKKTGGLVIWRSGSNIILYRGADYKYPYFSENSFENNSAQ----DANPDLFMGAEEHMT 507

Query: 329  TLSSINDEKSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELAEDAESLLEGLGPRFS 388
              S I+  KS    +SD+ +   +IQGVG+P++VRFELPGEAE  E+A+ LLEGLGPRF+
Sbjct: 508  NSSGIDAVKS---DASDRKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEGLGPRFT 567

Query: 389  DWWGYDPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGR 448
            DWWG +PLP+DADLLPA+VPGY++PFRLLPYGVKPKLTNDEMT+LRRL RPLPCHF LGR
Sbjct: 568  DWWGCEPLPIDADLLPAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFVLGR 627

Query: 449  NRNLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFY 508
            NR LQGLAA+I+KLWEKCEIAK+AVKRGVQNTNS LM EEL+ LTGGTLLSRDREFIVFY
Sbjct: 628  NRKLQGLAAAIVKLWEKCEIAKVAVKRGVQNTNSELMVEELKWLTGGTLLSRDREFIVFY 687

Query: 509  RGKDFLPFAVSSAIEQQRYIRLQKMKQMD-NALSTTVQEKKLEINERGPTNGSQSITEWK 568
            RGKDFLP AVSSAIE++R    ++ K+   N+     +E+K    E    +G       K
Sbjct: 688  RGKDFLPSAVSSAIEERRKQVFEEEKRNGFNSSVANAKERKQSTTESVSDDGHAHRNNQK 747

Query: 569  RVVSEQRKLISSETSMRKTTIKLSIALEKKAKAEELLAKLEEEEMLRQPEIDKEGITVEE 628
             V  E++KL S E ++++T  KL+ ALEKKA+AE+LL +LEE+E+ +Q ++DKEGIT EE
Sbjct: 748  GV-QEKKKLTSMEAAIKRTADKLTTALEKKAEAEKLLLELEEDEVPQQSDMDKEGITEEE 807

Query: 629  RYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSSKTVHDIARTLE 688
            R+ML+K+GLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVK+IT  ++ + VH IAR LE
Sbjct: 808  RFMLRKIGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVITGRKNIEEVHQIARMLE 867

Query: 689  AESGGILVAVERVNRSYAIIIYRGKNYKRPSRLRPETLLNKKEALKRSIEEQRRKSLKLH 748
            AESGGILVAVERVN+ YAII+YRGKNY+RP+ LRP+TLL+K+EA+KRSIE QRR+SLKLH
Sbjct: 868  AESGGILVAVERVNKGYAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLH 927

Query: 749  VLKLTQNVKELKLQLDKDKKAIGMESIKKSTFQQGKEGTNEIQTAGSLKLDTDPACLSHA 808
            VLKLTQN++ L+ +L K+++   ++S      Q    G ++   AG     +  A  S  
Sbjct: 928  VLKLTQNIEALQSRLAKNEEISHIQSPDIVDRQVPVMGISD--AAGGTNYQSIVA--SPI 987

Query: 809  EDNACLEENEVAMVKGGNAAHTSGTVCLETSINSLQATQRDSDT-FLTSDGDQTNAELKS 868
            ED+             G+AA  +     +   N    T  DS   F  +   Q   ++++
Sbjct: 988  EDS-------------GDAAEDTDPSSQKELSNDFSDTDHDSQQEFPINPFFQYEGKVEA 1047

Query: 869  SSEPVGQGNHTKVSMAENA-----------AFGSFEPLSVANCLSGENNSGTSDAVHLIA 928
              + + Q  H  +S  + +            FGS    SV+    GE        +H   
Sbjct: 1048 MGDTI-QPQHQSISSIKESKSMFNVNVDQETFGSAVSESVSKSSRGEVK------IHFSE 1107

Query: 929  LNKKMKPSVRLEEEKLAMRMNQXMWMNQPGQIPARAPQLSNKERLLLXMRMNQPGQIPAR 988
                 KP            +N  M ++QP   P   PQ     + L   R    G +  R
Sbjct: 1108 TRSFNKPR----------EVNNKMEVSQP---PPVKPQ-----QTLRSTRSRSEG-MSTR 1167

Query: 989  APQLSNKERLLLRRQALKMKKRPVLAVGKSNIITGVAKAIKQHFKKHSLAIVNVKGRAKG 1048
              QLSN+ERLLLR+QALKMKK+PVLAVG+SNI+TGVAK IK+HFKK+ LAIVNVKGRAKG
Sbjct: 1168 RVQLSNRERLLLRKQALKMKKQPVLAVGRSNIVTGVAKNIKEHFKKYPLAIVNVKGRAKG 1227

Query: 1049 TSVQEIVFKLEHATGAVLVSQEPSKVILYRGW---------EEEDKSQDRKQSKGEAQLS 1096
            TSV+E+VFKLE ATGAVLVSQEPSKVILYRGW            D S  +   + +  +S
Sbjct: 1228 TSVREVVFKLEQATGAVLVSQEPSKVILYRGWGPGGERGASNGNDTSNSKNSREQKELMS 1252

BLAST of Cp4.1LG03g07840 vs. TAIR10
Match: AT3G01370.1 (AT3G01370.1 CRM family member 2)

HSP 1 Score: 905.2 bits (2338), Expect = 3.9e-263
Identity = 535/1035 (51.69%), Postives = 690/1035 (66.67%), Query Frame = 1

Query: 89   LPNQLXQRIADKLRSLGFTEQPPEP-----VSDPNAPSTPGEIFVPLPNQLPKYRVGHTI 148
            LP    QRIA+KLRSLGF E+  +        + +  ++PGEIFVPLP QLP +RVGHTI
Sbjct: 55   LPQSAIQRIAEKLRSLGFVEEKHDSPTRRITGEESGKNSPGEIFVPLPKQLPIHRVGHTI 114

Query: 149  DSSWSTPENPVPEPGTGSAIKRFHIMRDELEKRKREDGVKQRKREERAPTLAELSLPEEE 208
            D+SWSTP  PVP+PG+G+AI R+H    EL++  +++   +RK+EE+ P+LAEL+LP  E
Sbjct: 115  DTSWSTPSYPVPKPGSGTAISRYH----ELKRVWKKETEMERKKEEKVPSLAELTLPPAE 174

Query: 209  LRRLQGIGIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLNMKRTHDLLE 268
            LRRL+ +GIRL +KLKIGKAG+TEGIVN IHE+WR +EVVKI CED+ R+NMKRTHD+LE
Sbjct: 175  LRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLE 234

Query: 269  RKTGGIVVWRSGSKIILYRGPNYVYPYF-SDEILKHDASQGALLDSHSDDDGGNSETEST 328
             KTGG+V+WRSGSKI+LYRG NY YPYF SD  L H+A+ GA   S  D    +S  + +
Sbjct: 235  TKTGGLVIWRSGSKILLYRGVNYQYPYFVSDRDLAHEAASGA---SSMDQGVVDSREKQS 294

Query: 329  LSSINDEKSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELAEDAESLLEGLGPRFSD 388
            ++     +S+ P+ ++K+    L QGVG+P+KVRF+LPGE +L E+A+ LLEGLGPRF+D
Sbjct: 295  IA-----ESSAPSITNKMVKPMLTQGVGSPDKVRFQLPGEVQLVEEADRLLEGLGPRFTD 354

Query: 389  WWGYDPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRN 448
            WW YDPLPVD DLLPAVVP YR+PFRLLPYGV PKLT+DEMT++RRL RPLPCHFALGRN
Sbjct: 355  WWAYDPLPVDGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGRN 414

Query: 449  RNLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFYR 508
            RNLQGLA +I+KLWEKCE+AKIAVKRGVQNTNS LMAEEL+ LTGGTL+SRD++FIV YR
Sbjct: 415  RNLQGLAVAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKWLTGGTLISRDKDFIVLYR 474

Query: 509  GKDFLPFAVSSAIEQQRY---------IRLQKMKQMDNALSTTVQEKKLEINERGPTNGS 568
            GKDFLP AVSSAIE++R          +   K+ + +  +     ++ +E+  +   +  
Sbjct: 475  GKDFLPSAVSSAIEERRRQTMIMENSSVHGNKLTENEEEIKPRAVKEDIELEAKDQKDHI 534

Query: 569  QSITEWKRVVSEQRKLISSETSMRKTTIKLSIALEKKAKAEELLAKLEEEEMLRQPEIDK 628
            Q+     ++ S QR   S E  + KT++KLS+ALEKKA AE++LA LE  E  +  +IDK
Sbjct: 535  QT----HQMKSRQRN--SPEAILEKTSMKLSMALEKKANAEKVLADLENRESPQLSDIDK 594

Query: 629  EGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSSKTVH 688
            EGIT +E+YML+K+GL+MKPFLLLGRRGVFDGT+ENMHLHWKYRELVKII NE S +  H
Sbjct: 595  EGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAAH 654

Query: 689  DIARTLEAESGGILVAVERVNRSYAIIIYRGKNYKRPSRLRPETLLNKKEALKRSIEEQR 748
             +A  LEAESGGILVAVE V++ YAII+YRGKNY+RP  LRP+TLL+K+EALKRS+E QR
Sbjct: 655  KVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREALKRSVEAQR 714

Query: 749  RKSLKLHVLKLTQNVKELKLQLDKDKKAIGMESIKKSTFQQGKEGTNEIQTAGSLKLDTD 808
            RKSLKLHVLKL+ N++EL  QL +D       S    T+  G+     ++       +T+
Sbjct: 715  RKSLKLHVLKLSNNIEELNRQLVED-------SATNETWSDGESSNMMVEE------ETE 774

Query: 809  PACLSHAEDNACLEENEVAMVKGGNAAHTSGTVCLETSINSLQATQRDSDTFLTSDGDQT 868
                 H E     E+ E+       +  +SG    E        ++ + D   TS  +  
Sbjct: 775  N---QHTEPEKAREKIELGY-SSDLSVPSSGEENWEDD------SEGEVDPLTTSSQEYQ 834

Query: 869  NAELKSSSEPVGQGNHTKVSMAENAAFGSFEPLSVANCLSGENNSGTSDAVHLIALNKKM 928
              E +S+S    +GN    S+   A    F     AN  S  + S   ++   +  N+K+
Sbjct: 835  EDESESASSQRHEGN----SLDSTANLSVFAETGSANASSFHDRSLPHNS--FLNANRKL 894

Query: 929  KPSVRLEEEKLAMRMNQXMWMNQPGQIPARAPQLSNKERLLLXMRMNQPGQIPARAPQLS 988
                                   PG       Q+S     L   +    G +      LS
Sbjct: 895  -----------------------PGSSTGSGSQIS----ALRERKSENDGLVT----DLS 954

Query: 989  NKERLLLRRQALKMKKRPVLAVGKSNIITGVAKAIKQHFKKHSLAIVNVKGRAKGTSVQE 1048
            N+ERL+LR+QALKMKKRP  AVG+SN++TG+A+ +K HF+K+ LAIVNVKGRA GTSVQE
Sbjct: 955  NRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSVQE 1011

Query: 1049 IVFKLEHATGAVLVSQEPSKVILYRGW--EEEDKS-QDRKQSKGEAQL-----------S 1095
            ++ KL+  TGA+LVSQEPSKVILYRGW  EEE KS       K    L            
Sbjct: 1015 VIAKLKEETGALLVSQEPSKVILYRGWGAEEEMKSFYPNNNVKSSINLPSTRSFVDDPPH 1011

BLAST of Cp4.1LG03g07840 vs. TAIR10
Match: AT3G18390.1 (AT3G18390.1 CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 449.1 bits (1154), Expect = 7.7e-126
Identity = 268/684 (39.18%), Postives = 416/684 (60.82%), Query Frame = 1

Query: 95  QRIADKLRSLGFTEQPPEPVSDPNAPSTPGEIFVPLPNQLPKYRVGHTIDSSWSTPENPV 154
           +RI  +LR+LG      + V D       G    P+  +    R+G  +   W  P+  +
Sbjct: 135 ERIVLRLRNLGLGSDDEDDVEDDEGGGINGGDVKPVTGE---ERLGDLLKREWVRPDMML 194

Query: 155 PEPGTGSAIKRFHIMRDELEKRKR------EDGVK-QRKREERAPTLAELSLPEEELRRL 214
            E           +  ++ E+ +       E GV   +KR  RAP+LAEL++ + ELRRL
Sbjct: 195 AEGEESEEEDEVLLPWEKNEEEQAAERVVGEGGVAVMQKRRARAPSLAELTVEDSELRRL 254

Query: 215 QGIGIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLNMKRTHDLLERKTG 274
           +  G+ L+ ++ I KAG+T+ ++  I++ WR+ E+V++   ++   +MK  H+++ER+TG
Sbjct: 255 RRDGMYLRVRINIPKAGLTQAVMEKIYDTWRKEELVRLKFHEVLARDMKTAHEIVERRTG 314

Query: 275 GIVVWRSGSKIILYRGPNYVYPYFSDEILKHDASQGALLDSHSDDDGGNSET--ESTLSS 334
           G+V+WR+GS +++YRG +Y  P                    S+   G  ET     +SS
Sbjct: 315 GMVIWRAGSVMVVYRGLDYKGPPVI-----------------SNQMAGPKETLFVPDVSS 374

Query: 335 INDEKSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELAEDAESLLEGLGPRFSDWWG 394
             DE +    + D  +   +I+     N +R E   E E+  +  SLL+ LGPRF +WWG
Sbjct: 375 AGDEAT---NAKDNQSAPLVIKDPIIKNPIRKENMTEEEV--EFNSLLDSLGPRFQEWWG 434

Query: 395 YDPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNRNL 454
              LPVDADLLP  +PGY+ PFRLLP G++  LTN EMT+LR++ + LPCHFALGRNRN 
Sbjct: 435 TGVLPVDADLLPPTIPGYKTPFRLLPTGMRSNLTNAEMTNLRKIGKTLPCHFALGRNRNH 494

Query: 455 QGLAASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFYRGKD 514
           QGLAA+I+++WEK  IAKIAVKRG+QNTN+ LMA+E++ LTGG LL R++ +IV YRGKD
Sbjct: 495 QGLAAAILQIWEKSLIAKIAVKRGIQNTNNKLMADEVKTLTGGVLLLRNKYYIVIYRGKD 554

Query: 515 FLPFAVSSAIEQQRYIRLQKMKQMDNALSTTVQEKKLEINERGPTNGS------QSITEW 574
           FLP +V++ + +++ +  ++++ ++  +     E    + ++ P          ++   W
Sbjct: 555 FLPSSVAATLAERQEL-TKEIQDVEERVRNREIEAVQPVGDKVPAEAGTLAEFYEAQARW 614

Query: 575 -KRVVSEQRKLISSETS-------MRKTTIKLSIALEKKAKAEELLAKLEEEEMLRQPEI 634
            K +  + R+ +  E S       +++   KL++A  K  +AE+LL+K+E   +   P+ 
Sbjct: 615 GKEITPDHREKMIEEASRVANARVVKRIQHKLNLAQSKFQRAEKLLSKIEASMIPNGPDY 674

Query: 635 DKEGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSSKT 694
           D+E I+ EER M +KVGL+MK +L +G RGVFDG +ENMHLHWK+RELVK+I+ +++   
Sbjct: 675 DQEVISEEERAMFRKVGLKMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKNQAF 734

Query: 695 VHDIARTLEAESGGILVAVERVNRSYAIIIYRGKNYKRPSRLRPETLLNKKEALKRSIEE 754
           V + AR LE ESGG+LVA+E+V + +A+I YRGKNY+RP  LRP  LL K +ALKRSI  
Sbjct: 735 VEETARLLEYESGGVLVAIEKVPKGFALIYYRGKNYRRPISLRPRNLLTKAKALKRSIAM 792

Query: 755 QRRKSLKLHVLKLTQNVKELKLQL 756
           QR ++L  H+ +L + +++++ QL
Sbjct: 795 QRHEALSQHISELERTIEQMQSQL 792

BLAST of Cp4.1LG03g07840 vs. TAIR10
Match: AT3G23070.1 (AT3G23070.1 CRM family member 3A)

HSP 1 Score: 446.0 bits (1146), Expect = 6.5e-125
Identity = 279/688 (40.55%), Postives = 413/688 (60.03%), Query Frame = 1

Query: 95  QRIADKLRSLGFTEQPPEPVSDPNAPSTPG---EIFVPLPNQLPKYRVGHTIDSSWSTPE 154
           ++I +KL+  G+ E+      +       G   +IF     +LP  R G T + S    E
Sbjct: 120 EKIVEKLKKYGYMEEVQNKEIEQERRIEKGSVEDIFYVEEGKLPNTRGGFT-EESLLGGE 179

Query: 155 NPVPEPG-TGSAIKRFHIMRDELEKRKREDGVKQRKREERAPTLAELSLPEEELRRLQGI 214
           N +   G  G   ++         K K+E   +   ++E   +LAE++LPE ELRRL+ +
Sbjct: 180 NVIGSNGDVGFPWEKMSA------KEKKELEAEWTAKKENRYSLAEMTLPESELRRLRNL 239

Query: 215 GIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLNMKRTHDLLERKTGGIV 274
             R   K++I   GVT+  V+ I E+W+ +E+V++  E    LNM++ H++LE+KTGG+V
Sbjct: 240 TFRTASKMRIRGGGVTQVAVDAIKEKWKSAEIVRLKIEGASALNMRKMHEILEKKTGGLV 299

Query: 275 VWRSGSKIILYRGPNYVYPYFS-DEILKHDASQGALLDSHSDDDGGNSETESTLSSINDE 334
           +WRSG+ I LYRG +Y  P    ++  + +    A++++H +         +T+   +DE
Sbjct: 300 IWRSGTSISLYRGVSYELPSGKWNKQRREETPPEAVIENHDET--------TTMVDKSDE 359

Query: 335 KSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELAEDAESLLEGLGPRFSDWWGYDPL 394
           K   P    +    T ++     + V        E  ++ + LL+ LGPRF DW G +PL
Sbjct: 360 KVHLPQLEQET---TSVEKKDQTSPV-------VEYEDELDELLDDLGPRFMDWPGDNPL 419

Query: 395 PVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNRNLQGLA 454
           PVDADLLP  +P Y  PFR+LPYGV+  L   E T+LRRL+R +P HFALGR+R LQGLA
Sbjct: 420 PVDADLLPGAIPDYEPPFRVLPYGVRSSLGPKEATALRRLARSIPPHFALGRSRQLQGLA 479

Query: 455 ASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFYRGKDFLPF 514
            ++++LWEK  +AKIA+KRGVQ+T S  MAE+L+ LTGG +LSR+++F+VFYRGK+FL  
Sbjct: 480 TAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLKKLTGGIMLSRNKDFLVFYRGKNFLSR 539

Query: 515 AVSSA-IEQQRYIRL------QKMKQMDNALSTTVQEKKLEINERGPTNGSQSIT-EWKR 574
            V+ A +EQ+R++R       Q   +  +AL     E   ++   G    +   T +W +
Sbjct: 540 EVADALVEQERFVRTLQDEEEQARLRGSSALIVPSTEPANKLVSAGTLGETLDATGKWGK 599

Query: 575 ---------VVSEQRKLISSETSMRKTTIKLSIALEKKAKAEELLAKLEEEEMLRQPEID 634
                     V ++ +++  E  +RK   KL+ A  K  KAE  LAK+E      +   D
Sbjct: 600 NLDDDDHSDEVKQEVEILRHENLVRKLERKLAFAERKLLKAERGLAKVEVCLKPAEQRED 659

Query: 635 KEGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSSKTV 694
            E IT EER+M +K+GL+MK FLLLGRRGVFDGTVENMHLHWKYRELVKII   ++   V
Sbjct: 660 PESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGV 719

Query: 695 HDIARTLEAESGGILVAVERVNRSYAIIIYRGKNYKRPSRLRPETLLNKKEALKRSIEEQ 754
             +A  LEAESGGILV++++V + YAII+YRG++YKRP+ LRP+ LL K++AL RSIE Q
Sbjct: 720 KKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRKALARSIELQ 779

Query: 755 RRKSLKLHVLKLTQNVKELKLQLDKDKK 761
           RR+ L  H+  +    K+L+ ++++ +K
Sbjct: 780 RREGLLKHISTMQAKAKQLRAEIEQMEK 782

BLAST of Cp4.1LG03g07840 vs. TAIR10
Match: AT4G29750.1 (AT4G29750.1 CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 426.4 bits (1095), Expect = 5.3e-119
Identity = 271/640 (42.34%), Postives = 369/640 (57.66%), Query Frame = 1

Query: 195 AELSLPEEELRRLQGIGIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLN 254
           AE  +PE EL+RL+ + +R+  ++K+G AG+T+ +V  IHE+W   EVVK+   +   LN
Sbjct: 240 AERIVPEHELKRLRNVALRMVERVKVGSAGITQALVEAIHEKWEVDEVVKLKFSEPYSLN 299

Query: 255 MKRTHDLLERKTGGIVVWRSGSKIILYRGPNYVYPYFSDEILKHDASQGALLDSHSDDDG 314
           MKRTH++LE+KTGG+V+WRSGS ++LYRG +Y        I +++               
Sbjct: 300 MKRTHEVLEKKTGGLVIWRSGSSVVLYRGISYKLKCVQTFIKQNNLE------------- 359

Query: 315 GNSETESTLSSINDEKSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGE--AELAEDAESL 374
                            A P     +     +Q  G   K    +P E  +EL E    L
Sbjct: 360 -----------------ANPEIHRSVEARDYVQEDGNYPK---NVPKEQLSELCE-LNDL 419

Query: 375 LEGLGPRFSDWWGYDPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRP 434
           L+ +GPRF DW G  P PVDADLLP  V GYR PFR+LP GVKP L+N EMT +RRL+R 
Sbjct: 420 LDEVGPRFHDWTGCAPFPVDADLLPGYVEGYRCPFRILPQGVKPCLSNTEMTEMRRLART 479

Query: 435 LPCHFALGRNRNLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLS 494
            P HFALGR+R LQGLA +++KLW K  IAKIA+KRGV+NT +  MAEEL+ LT G L+S
Sbjct: 480 SPPHFALGRSRELQGLAKAMVKLWAKSAIAKIAIKRGVENTRNERMAEELKRLTRGVLVS 539

Query: 495 RDREFIVFYRGKDFLPFAVSSAI-EQQRYIRLQKMKQMDNA------------------- 554
           R++E+IVFYRG DF+P AV+ A+ E+Q+ I      + D A                   
Sbjct: 540 RNKEYIVFYRGNDFMPPAVAEALTERQKEITEVLQAKEDQAREMASTRATLTSQAKSPKT 599

Query: 555 --LSTTVQEKKLEINERGPTNGSQSITEWKRVVSEQRKLISSETSMRKTTIKLSIALEKK 614
             L+ T+ E     +   P   S  I E KR    +   I     +R   ++L    +K 
Sbjct: 600 QLLAGTLAETIAASSRWAPNASSVDIEELKR----ESASIKRAALIRDLELRLLYGKQKL 659

Query: 615 AKAEELLAKLEEEEMLRQPEIDKEGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENM 674
            +AE  LAK++++    +   D E IT EER + +K+GL M PFLLLGRR V+DGT+ENM
Sbjct: 660 RRAERDLAKVQKDLDPSELPTDSEIITEEERLLYRKIGLSMDPFLLLGRREVYDGTIENM 719

Query: 675 HLHWKYRELVKIITNERSSKTVHDIARTLEAESGGILVAVERVNRSYAIIIYRGKNYKRP 734
           HLHWK+RELVK+I   +S   V  IA +LEAESGG+LV+V++  + YAII+YRGKNY+ P
Sbjct: 720 HLHWKHRELVKVIVRGKSLPQVKHIAISLEAESGGVLVSVDKTMKGYAIILYRGKNYQMP 779

Query: 735 SRLRPETLLNKKEALKRSIEEQRRKSLKLHVLKLTQNVKELKLQLDKDKKAIGMESIKKS 794
            RLRP  LL +K+A  RSIE QRR++LK HV  L + ++ LK   D D     ME+  KS
Sbjct: 780 FRLRPSNLLTRKKAFARSIELQRREALKYHVADLEERIELLKTGQDDD-----METRNKS 825

Query: 795 TFQQGKEGTNEIQTAGSLKLDTDPACLSHAEDNACLEENE 811
             ++            +L L  D +  S  ED +   E+E
Sbjct: 840 DEEE-----------ENLYLRVDESDFSSDEDESLEWESE 825

BLAST of Cp4.1LG03g07840 vs. TAIR10
Match: AT4G14510.1 (AT4G14510.1 CRM family member 3B)

HSP 1 Score: 391.7 bits (1005), Expect = 1.5e-108
Identity = 254/648 (39.20%), Postives = 372/648 (57.41%), Query Frame = 1

Query: 173 LEKRKREDGVKQRKREERAPTLAELSLPEEELRRLQGIGIRLKRKLKIGKAGVTEGIVNT 232
           +EK++  +G    K+E R  +LAE++L E EL RL+ +  R K K+++  AGVT+ +V+ 
Sbjct: 197 MEKKELVNGEWTAKKESRY-SLAEMTLSEFELNRLRNVMFRTKSKMRVTGAGVTQAVVDA 256

Query: 233 IHEQWRRSEVVKIVCEDLCRLNMKRTHDLLERKTGGIVVWRSGSKIILYRGPNYVYPYFS 292
           I E+W+ SE+V++  E    LNM+R H++LERKTGG+V+WRSG+ I LY   NY      
Sbjct: 257 IQEKWKGSEIVRLKIEGSSALNMRRMHEILERKTGGLVIWRSGTSIALY---NY------ 316

Query: 293 DEILKHDASQGALLDSHSDDDGGNSETESTLSSINDEKSAEPTSSDKLAGGTLIQGVGAP 352
                            S+ DG  +  +          S+ PTS+   +    +Q V  P
Sbjct: 317 --------------KGGSNRDGSGNMNKQVYRRAERLPSSLPTSTVDQS----VQLVNLP 376

Query: 353 ----------NKVRFELPGEAELAEDAESLLEGLGPRFSDWWGYDPLPVDADLLPAVVPG 412
                     NK R   P E E  ++   LLEGLGPR++DW G  PLPVDADLLP +VPG
Sbjct: 377 QLEKEPTVVGNKDRTS-PQEVEYEDEINELLEGLGPRYTDWQGGYPLPVDADLLPGIVPG 436

Query: 413 YRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNRNLQGLAASIIKLWEKCEIA 472
           Y  PFR LPYGV+  L   E TSLRR++  LP HFALGR+R LQGLA +++KLW+K  IA
Sbjct: 437 YEPPFRALPYGVRSTLGTKEATSLRRIATVLPPHFALGRSRQLQGLATAMVKLWQKSLIA 496

Query: 473 KIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFYRGKDFLPFAVSSAI------- 532
           K+A+KRGVQ T S  MAE+++ LTGG LLSR+++F+VFYRGK FL   V  A+       
Sbjct: 497 KVALKRGVQLTTSERMAEDIKRLTGGMLLSRNKDFLVFYRGKSFLSLEVGEALMEKEMLV 556

Query: 533 ----EQQRYIRLQKMKQM-------DNALSTTVQEKKLEINERGPTNGSQSITEWKRVVS 592
               +++   RL+    +       +  L+ T+Q+K+ +         S           
Sbjct: 557 RTLQDEEEQARLRASSALVVPSIKANQQLARTLQDKEEQARPSALVLPS---------TK 616

Query: 593 EQRKLISSET--SMRKTTIKLSIALEKKAKAEEL---LAKLEEEEMLRQPE-----IDKE 652
             + L+S+ T       T K    L+     EE+   + K+   +++R+ E      +K+
Sbjct: 617 ANQNLVSAGTLGETLDATGKWGKNLDNDDHVEEMKQEVEKVRSAKLVRKLERKLAFAEKK 676

Query: 653 GITVE-------------------------ERYMLKKVGLRMKPFLLLGRRGVFDGTVEN 712
            +  E                         ER+M +K+GL+MK FLLLGRRGVFDGTVEN
Sbjct: 677 LLKAERALAKVEESLKPAEQRTDLEGITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVEN 736

Query: 713 MHLHWKYRELVKIITNERSSKTVHDIARTLEAESGGILVAVERVNRSYAIIIYRGKNYKR 758
           MHLHWKYREL+KI+   ++ +    +A  LEAESGGILV+V+++++ YA+I+YRGK+YKR
Sbjct: 737 MHLHWKYRELIKILVKAKTLEGAQKVAMALEAESGGILVSVDKISKGYAVIVYRGKDYKR 796

BLAST of Cp4.1LG03g07840 vs. NCBI nr
Match: gi|659085528|ref|XP_008443467.1| (PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 1523.1 bits (3942), Expect = 0.0e+00
Identity = 808/1013 (79.76%), Postives = 882/1013 (87.07%), Query Frame = 1

Query: 89   LPNQLXQRIADKLRSLGFTEQPPEPVSDPNAPSTPGEIFVPLPNQLPKYRVGHTIDSSWS 148
            LP    QRIADKLRSLGFTE PPEP+ DPN+PS PG IFVPLPNQLPKYRVGHTIDSSWS
Sbjct: 54   LPKSAIQRIADKLRSLGFTESPPEPLPDPNSPSAPGAIFVPLPNQLPKYRVGHTIDSSWS 113

Query: 149  TPENPVPEPGTGSAIKRFHIMRDELEKRKREDGVKQRKREERAPTLAELSLPEEELRRLQ 208
            TPENPVPEPGTG+AIK+FH +R E++KRK+ DG++++KREERAP+LAEL+L EEEL RL+
Sbjct: 114  TPENPVPEPGTGTAIKKFHELRGEVQKRKKGDGIREKKREERAPSLAELNLTEEELARLR 173

Query: 209  GIGIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLNMKRTHDLLERKTGG 268
             IGIRLK+KL +GKAG+TEGIVN+IHE WRRSEVVKI CEDLCR NMKRTHDLLERKTGG
Sbjct: 174  TIGIRLKKKLNVGKAGITEGIVNSIHEHWRRSEVVKIACEDLCRFNMKRTHDLLERKTGG 233

Query: 269  IVVWRSGSKIILYRGPNYVYPYFSDEILKHDASQGALLDSHSDDDGGNSETESTLSSIND 328
            IVVWRSGSKI+LYRGP Y+YPYFS EILK++ASQ AL DSHSDD+G NS+TESTLS  ND
Sbjct: 234  IVVWRSGSKIVLYRGPKYIYPYFSHEILKNEASQDALPDSHSDDEG-NSKTESTLSCNND 293

Query: 329  EKSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELAEDAESLLEGLGPRFSDWWGYDP 388
            E+SA PTSS K+   TLIQGVGAPN+VRF+LPGEAEL+EDAESLLEGLGPRFSDWWGYDP
Sbjct: 294  ERSAGPTSSVKMPSPTLIQGVGAPNRVRFQLPGEAELSEDAESLLEGLGPRFSDWWGYDP 353

Query: 389  LPVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNRNLQGL 448
            LPVDADLLPA+VPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNR LQGL
Sbjct: 354  LPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNRKLQGL 413

Query: 449  AASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFYRGKDFLP 508
            AASII+LWEKCE+AKIAVKRGVQNTNS LMAEELQLLTGGTLLSRDREFIV YRGKDFLP
Sbjct: 414  AASIIQLWEKCEVAKIAVKRGVQNTNSELMAEELQLLTGGTLLSRDREFIVLYRGKDFLP 473

Query: 509  FAVSSAIEQQRYIRLQKMKQMDNALSTTVQEKKLEINERGPTNGSQSITEWKRVVSEQRK 568
            FAVSSA+EQQR++RL +MKQ D    T  Q  KLEINE GPTN SQSITE K++VSE+RK
Sbjct: 474  FAVSSAMEQQRHMRLHEMKQTD----TMGQGLKLEINENGPTNESQSITERKKMVSERRK 533

Query: 569  LISSETSMRKTTIKLSIALEKKAKAEELLAKLEEEEMLRQPEIDKEGITVEERYMLKKVG 628
            L+SSETSMRKT+IKLS+ALEKKAKAEE+LAKLEEEE L+QPEIDKEGITVEERYMLKKVG
Sbjct: 534  LMSSETSMRKTSIKLSVALEKKAKAEEILAKLEEEEKLQQPEIDKEGITVEERYMLKKVG 593

Query: 629  LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSSKTVHDIARTLEAESGGILV 688
            LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERS KTVHD+ARTLEAESGGILV
Sbjct: 594  LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGILV 653

Query: 689  AVERVNRSYAIIIYRGKNYKRPSRLRPETLLNKKEALKRSIEEQRRKSLKLHVLKLTQNV 748
            AVERVNRS+AIIIYRGKNYKRPSRLRPE+LLNKKEALKRS+E QRRKSLKLHVLKLTQNV
Sbjct: 654  AVERVNRSFAIIIYRGKNYKRPSRLRPESLLNKKEALKRSMEAQRRKSLKLHVLKLTQNV 713

Query: 749  KELKLQLDKDKKAIGMESIKKSTFQQGKEGTNEIQTAGSLKLDTDPACLSHAEDNACLEE 808
            +ELKL+LD+DK+AIGMES K STFQQGKEG +EIQT GSLKL  D ACLSHAEDN CLEE
Sbjct: 714  EELKLKLDEDKRAIGMESKKTSTFQQGKEGIDEIQTTGSLKLVADSACLSHAEDNTCLEE 773

Query: 809  NEVAMVKGGNAAHTSGTVCLETSINSLQATQRDSDTFLTSDGDQTNAELKSSSEPVGQGN 868
            +EVA VK G+  H+SGT+CL+TS+NSLQAT   +D F   +GDQ+NA  + S E V QGN
Sbjct: 774  DEVAKVKRGHGTHSSGTMCLDTSVNSLQAT---NDVFFIHNGDQSNATARPSFESVRQGN 833

Query: 869  HTKVSMAENAAFGSFEPLSVANCLSGENNSGTSDAVHLIALNKKMKPSVRLEEEKLAMRM 928
            H KV M   A FG+ EP S AN LSG+NNSGTSDAVH +ALN+  KPSVRLEEEK     
Sbjct: 834  HAKVPMDTTAEFGTIEPQSGANSLSGKNNSGTSDAVHHVALNEDTKPSVRLEEEK----- 893

Query: 929  NQXMWMNQPGQIPARAPQLSNKERLLLXMRMNQPGQIPARAPQLSNKERLLLRRQALKMK 988
                                    LL  MR+NQPG +PA APQLSNKERLLLRRQALKMK
Sbjct: 894  ---------------------SPPLLSSMRINQPGYLPASAPQLSNKERLLLRRQALKMK 953

Query: 989  KRPVLAVGKSNIITGVAKAIKQHFKKHSLAIVNVKGRAKGTSVQEIVFKLEHATGAVLVS 1048
            KRPVLAVGKSN+ITGVAKAIK+HFKKHSLAIVNVKGRAKGTSVQEIVFKLE ATGAVLVS
Sbjct: 954  KRPVLAVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATGAVLVS 1013

Query: 1049 QEPSKVILYRGWEEEDKSQDRKQ------SKGEAQLSMSPELLAAIRVECGLR 1096
            QEPSKVILYRGWEEEDKSQDRKQ      + GE +LSM  ELLAAIRVECGLR
Sbjct: 1014 QEPSKVILYRGWEEEDKSQDRKQNATVMENSGEDRLSMCSELLAAIRVECGLR 1032

BLAST of Cp4.1LG03g07840 vs. NCBI nr
Match: gi|449459492|ref|XP_004147480.1| (PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 1518.8 bits (3931), Expect = 0.0e+00
Identity = 803/1009 (79.58%), Postives = 876/1009 (86.82%), Query Frame = 1

Query: 89   LPNQLXQRIADKLRSLGFTEQPPEPVSDPNAPSTPGEIFVPLPNQLPKYRVGHTIDSSWS 148
            LP    QRIADKLRSLGFTE PPEP+ DPN+PS PG IFVPLPNQLPKYRVGHTIDSSWS
Sbjct: 54   LPKSAIQRIADKLRSLGFTESPPEPLPDPNSPSAPGAIFVPLPNQLPKYRVGHTIDSSWS 113

Query: 149  TPENPVPEPGTGSAIKRFHIMRDELEKRKREDGVKQRKREERAPTLAELSLPEEELRRLQ 208
             PENPVPEPGTG+AIKRFH +R E++K K+ DGV+++KREERAP+LAELSL EEEL RL+
Sbjct: 114  MPENPVPEPGTGTAIKRFHELRGEVQKWKKRDGVREKKREERAPSLAELSLTEEELGRLR 173

Query: 209  GIGIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLNMKRTHDLLERKTGG 268
             IGIRLK+KL +GKAG+TEGIVNTIHE WRRSEVVKI CEDLCRLNMKRTHDLLERKTGG
Sbjct: 174  TIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVVKIACEDLCRLNMKRTHDLLERKTGG 233

Query: 269  IVVWRSGSKIILYRGPNYVYPYFSDEILKHDASQGALLDSHSDDDGGNSETESTLSSIND 328
            IVVWRSGSKIILYRGPNY+YPYFS EIL+ + SQ AL  SHSD DGGNSETESTLS IND
Sbjct: 234  IVVWRSGSKIILYRGPNYIYPYFSHEILEDEGSQDALPASHSD-DGGNSETESTLSCIND 293

Query: 329  EKSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELAEDAESLLEGLGPRFSDWWGYDP 388
            E+SA PTSS K+   TLIQGVGAPN+VRF+LPGEAELAEDAESLLEGLGPRFSDWWGYDP
Sbjct: 294  ERSAGPTSSVKMPSPTLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDP 353

Query: 389  LPVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNRNLQGL 448
            LPVDADLLPA+VPGYRKPFRLLPYGVKPKLTNDEMTSLRRL+RPLPCHFALGRNR LQGL
Sbjct: 354  LPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGL 413

Query: 449  AASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFYRGKDFLP 508
            AASII+LWEKCEIAKIAVKRGVQNTN+ LMAEELQLLTGGTLLSRDREFIV YRGKDFLP
Sbjct: 414  AASIIQLWEKCEIAKIAVKRGVQNTNNKLMAEELQLLTGGTLLSRDREFIVLYRGKDFLP 473

Query: 509  FAVSSAIEQQRYIRLQKMKQMDNALSTTVQEKKLEINERGPTNGSQSITEWKRVVSEQRK 568
            FAVSSA+EQ+R++RL +MKQ DN+ +TT Q  KLEINE GPTN SQSIT WK++VSE+RK
Sbjct: 474  FAVSSAMEQKRHMRLHEMKQTDNSPATTGQGLKLEINENGPTNESQSITGWKKIVSERRK 533

Query: 569  LISSETSMRKTTIKLSIALEKKAKAEELLAKLEEEEMLRQPEIDKEGITVEERYMLKKVG 628
            L+SSETSMRKT+IKLSIALEKKAKAEE LAKLEEEE L+QPEIDKEGITVEERYMLKKVG
Sbjct: 534  LMSSETSMRKTSIKLSIALEKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKKVG 593

Query: 629  LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSSKTVHDIARTLEAESGGILV 688
            LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERS KTVHD+ARTLEAESGGILV
Sbjct: 594  LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGILV 653

Query: 689  AVERVNRSYAIIIYRGKNYKRPSRLRPETLLNKKEALKRSIEEQRRKSLKLHVLKLTQNV 748
            AVERV RS+AIII+RGKNYKRPSRLRPE+LLNKKEALKRSIE QRRKSLKLHVLKLTQNV
Sbjct: 654  AVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSLKLHVLKLTQNV 713

Query: 749  KELKLQLDKDKKAIGMESIKKSTFQQGKEGTNEIQTAGSLKLDTDPACLSHAEDNACLEE 808
            +ELKL+LD+DK+AIGMESIK STFQQGKEG +EIQT GSLKL  D ACL+HAE++ CLEE
Sbjct: 714  EELKLKLDEDKRAIGMESIKTSTFQQGKEGIDEIQTTGSLKLVADSACLTHAENSTCLEE 773

Query: 809  NEVAMVKGGNAAHTSGTVCLETSINSLQATQRDSDTFLTSDGDQTNAELKSSSEPVGQGN 868
            NEVA VK G+  H+SGT+CL+TS+N LQ T   +D FL  +GDQ+NA ++ S E V QGN
Sbjct: 774  NEVAKVKKGHGTHSSGTICLDTSVNRLQTT---NDVFLIHNGDQSNATVRPSFESVRQGN 833

Query: 869  HTKVSMAENAAFGSFEPLSVANCLSGENNSGTSDAVHLIALNKKMKPSVRLEEEKLAMRM 928
            H KV M  NA FG+ EP S AN LSGE+NSGTSDAVH +A+NK  KPSVRLEEEK     
Sbjct: 834  HAKVPMDTNAEFGTIEPQSGANSLSGESNSGTSDAVHHVAMNKDTKPSVRLEEEK----- 893

Query: 929  NQXMWMNQPGQIPARAPQLSNKERLLLXMRMNQPGQIPARAPQLSNKERLLLRRQALKMK 988
                                    LL   R+NQPG  PA  PQLSNKERLLLRRQALKMK
Sbjct: 894  ---------------------SPPLLSSTRINQPGYFPANVPQLSNKERLLLRRQALKMK 953

Query: 989  KRPVLAVGKSNIITGVAKAIKQHFKKHSLAIVNVKGRAKGTSVQEIVFKLEHATGAVLVS 1048
            K PVL+VGKSN+ITGVAKAIK+HFKKHSLAIVNVKGRAKGTSVQEIVFKLE ATGAVLVS
Sbjct: 954  KLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATGAVLVS 1013

Query: 1049 QEPSKVILYRGWEEEDKSQDRKQSK--GEAQLSMSPELLAAIRVECGLR 1096
            QEPSKVILYRGWEEED+ Q     K  GE +LSMS EL+AAIR+ECGLR
Sbjct: 1014 QEPSKVILYRGWEEEDRKQKATMMKNSGEDRLSMSSELMAAIRIECGLR 1032

BLAST of Cp4.1LG03g07840 vs. NCBI nr
Match: gi|700204492|gb|KGN59625.1| (hypothetical protein Csa_3G829150 [Cucumis sativus])

HSP 1 Score: 1486.9 bits (3848), Expect = 0.0e+00
Identity = 791/1009 (78.39%), Postives = 863/1009 (85.53%), Query Frame = 1

Query: 89   LPNQLXQRIADKLRSLGFTEQPPEPVSDPNAPSTPGEIFVPLPNQLPKYRVGHTIDSSWS 148
            LP    QRIADKLRSLGFTE PPEP+ DPN+PS PG IFVPLPNQLPKYRVGHTIDSSWS
Sbjct: 54   LPKSAIQRIADKLRSLGFTESPPEPLPDPNSPSAPGAIFVPLPNQLPKYRVGHTIDSSWS 113

Query: 149  TPENPVPEPGTGSAIKRFHIMRDELEKRKREDGVKQRKREERAPTLAELSLPEEELRRLQ 208
             PENPVPEPGTG+AIKRFH +R E++K K+ DGV+++KREERAP+LAELSL EEEL RL+
Sbjct: 114  MPENPVPEPGTGTAIKRFHELRGEVQKWKKRDGVREKKREERAPSLAELSLTEEELGRLR 173

Query: 209  GIGIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLNMKRTHDLLERKTGG 268
             IGIRLK+KL +GKAG+TEGIVNTIHE WRRSEVVKI CEDLCRLNMKRTHDLLERKTGG
Sbjct: 174  TIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVVKIACEDLCRLNMKRTHDLLERKTGG 233

Query: 269  IVVWRSGSKIILYRGPNYVYPYFSDEILKHDASQGALLDSHSDDDGGNSETESTLSSIND 328
            IVVWRSGSKIILYRGPNY+YPYFS EIL+ + SQ AL  SHSDD GGNSETESTLS IND
Sbjct: 234  IVVWRSGSKIILYRGPNYIYPYFSHEILEDEGSQDALPASHSDD-GGNSETESTLSCIND 293

Query: 329  EKSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELAEDAESLLEGLGPRFSDWWGYDP 388
            E+SA PTSS K+   TLIQGVGAPN+VRF+LPGEAELAEDAESLLEGLGPRFSDWWGYDP
Sbjct: 294  ERSAGPTSSVKMPSPTLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDP 353

Query: 389  LPVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNRNLQGL 448
            LPVDADLLPA+VPGYRKPFRLLPYGVKPKLTNDEMTSLRRL+RPLPCHFALGRNR LQGL
Sbjct: 354  LPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGL 413

Query: 449  AASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFYRGKDFLP 508
            AASII+LWEKCEIAKIAVKRG              LLTGGTLLSRDREFIV YRGKDFLP
Sbjct: 414  AASIIQLWEKCEIAKIAVKRG--------------LLTGGTLLSRDREFIVLYRGKDFLP 473

Query: 509  FAVSSAIEQQRYIRLQKMKQMDNALSTTVQEKKLEINERGPTNGSQSITEWKRVVSEQRK 568
            FAVSSA+EQ+R++RL +MKQ DN+ +TT Q  KLEINE GPTN SQSIT WK++VSE+RK
Sbjct: 474  FAVSSAMEQKRHMRLHEMKQTDNSPATTGQGLKLEINENGPTNESQSITGWKKIVSERRK 533

Query: 569  LISSETSMRKTTIKLSIALEKKAKAEELLAKLEEEEMLRQPEIDKEGITVEERYMLKKVG 628
            L+SSETSMRKT+IKLSIALEKKAKAEE LAKLEEEE L+QPEIDKEGITVEERYMLKKVG
Sbjct: 534  LMSSETSMRKTSIKLSIALEKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKKVG 593

Query: 629  LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSSKTVHDIARTLEAESGGILV 688
            LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERS KTVHD+ARTLEAESGGILV
Sbjct: 594  LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGILV 653

Query: 689  AVERVNRSYAIIIYRGKNYKRPSRLRPETLLNKKEALKRSIEEQRRKSLKLHVLKLTQNV 748
            AVERV RS+AIII+RGKNYKRPSRLRPE+LLNKKEALKRSIE QRRKSLKLHVLKLTQNV
Sbjct: 654  AVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSLKLHVLKLTQNV 713

Query: 749  KELKLQLDKDKKAIGMESIKKSTFQQGKEGTNEIQTAGSLKLDTDPACLSHAEDNACLEE 808
            +ELKL+LD+DK+AIGMESIK STFQQGKEG +EIQT GSLKL  D ACL+HAE++ CLEE
Sbjct: 714  EELKLKLDEDKRAIGMESIKTSTFQQGKEGIDEIQTTGSLKLVADSACLTHAENSTCLEE 773

Query: 809  NEVAMVKGGNAAHTSGTVCLETSINSLQATQRDSDTFLTSDGDQTNAELKSSSEPVGQGN 868
            NEVA VK G+  H+SGT+CL+TS+N LQ T   +D FL  +GDQ+NA ++ S E V QGN
Sbjct: 774  NEVAKVKKGHGTHSSGTICLDTSVNRLQTT---NDVFLIHNGDQSNATVRPSFESVRQGN 833

Query: 869  HTKVSMAENAAFGSFEPLSVANCLSGENNSGTSDAVHLIALNKKMKPSVRLEEEKLAMRM 928
            H KV M  NA FG+ EP S AN LSGE+NSGTSDAVH +A+NK  KPSVRLEEEK     
Sbjct: 834  HAKVPMDTNAEFGTIEPQSGANSLSGESNSGTSDAVHHVAMNKDTKPSVRLEEEK----- 893

Query: 929  NQXMWMNQPGQIPARAPQLSNKERLLLXMRMNQPGQIPARAPQLSNKERLLLRRQALKMK 988
                                    LL   R+NQPG  PA  PQLSNKERLLLRRQALKMK
Sbjct: 894  ---------------------SPPLLSSTRINQPGYFPANVPQLSNKERLLLRRQALKMK 953

Query: 989  KRPVLAVGKSNIITGVAKAIKQHFKKHSLAIVNVKGRAKGTSVQEIVFKLEHATGAVLVS 1048
            K PVL+VGKSN+ITGVAKAIK+HFKKHSLAIVNVKGRAKGTSVQEIVFKLE ATGAVLVS
Sbjct: 954  KLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATGAVLVS 1013

Query: 1049 QEPSKVILYRGWEEEDKSQDRKQSK--GEAQLSMSPELLAAIRVECGLR 1096
            QEPSKVILYRGWEEED+ Q     K  GE +LSMS EL+AAIR+ECGLR
Sbjct: 1014 QEPSKVILYRGWEEEDRKQKATMMKNSGEDRLSMSSELMAAIRIECGLR 1018

BLAST of Cp4.1LG03g07840 vs. NCBI nr
Match: gi|778685702|ref|XP_011652259.1| (PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 1360.5 bits (3520), Expect = 0.0e+00
Identity = 717/906 (79.14%), Postives = 784/906 (86.53%), Query Frame = 1

Query: 89  LPNQLXQRIADKLRSLGFTEQPPEPVSDPNAPSTPGEIFVPLPNQLPKYRVGHTIDSSWS 148
           LP    QRIADKLRSLGFTE PPEP+ DPN+PS PG IFVPLPNQLPKYRVGHTIDSSWS
Sbjct: 54  LPKSAIQRIADKLRSLGFTESPPEPLPDPNSPSAPGAIFVPLPNQLPKYRVGHTIDSSWS 113

Query: 149 TPENPVPEPGTGSAIKRFHIMRDELEKRKREDGVKQRKREERAPTLAELSLPEEELRRLQ 208
            PENPVPEPGTG+AIKRFH +R E++K K+ DGV+++KREERAP+LAELSL EEEL RL+
Sbjct: 114 MPENPVPEPGTGTAIKRFHELRGEVQKWKKRDGVREKKREERAPSLAELSLTEEELGRLR 173

Query: 209 GIGIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLNMKRTHDLLERKTGG 268
            IGIRLK+KL +GKAG+TEGIVNTIHE WRRSEVVKI CEDLCRLNMKRTHDLLERKTGG
Sbjct: 174 TIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVVKIACEDLCRLNMKRTHDLLERKTGG 233

Query: 269 IVVWRSGSKIILYRGPNYVYPYFSDEILKHDASQGALLDSHSDDDGGNSETESTLSSIND 328
           IVVWRSGSKIILYRGPNY+YPYFS EIL+ + SQ AL  SHSDD GGNSETESTLS IND
Sbjct: 234 IVVWRSGSKIILYRGPNYIYPYFSHEILEDEGSQDALPASHSDD-GGNSETESTLSCIND 293

Query: 329 EKSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELAEDAESLLEGLGPRFSDWWGYDP 388
           E+SA PTSS K+   TLIQGVGAPN+VRF+LPGEAELAEDAESLLEGLGPRFSDWWGYDP
Sbjct: 294 ERSAGPTSSVKMPSPTLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDP 353

Query: 389 LPVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNRNLQGL 448
           LPVDADLLPA+VPGYRKPFRLLPYGVKPKLTNDEMTSLRRL+RPLPCHFALGRNR LQGL
Sbjct: 354 LPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGL 413

Query: 449 AASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFYRGKDFLP 508
           AASII+LWEKCEIAKIAVKRGVQNTN+ LMAEELQLLTGGTLLSRDREFIV YRGKDFLP
Sbjct: 414 AASIIQLWEKCEIAKIAVKRGVQNTNNKLMAEELQLLTGGTLLSRDREFIVLYRGKDFLP 473

Query: 509 FAVSSAIEQQRYIRLQKMKQMDNALSTTVQEKKLEINERGPTNGSQSITEWKRVVSEQRK 568
           FAVSSA+EQ+R++RL +MKQ DN+ +TT Q  KLEINE GPTN SQSIT WK++VSE+RK
Sbjct: 474 FAVSSAMEQKRHMRLHEMKQTDNSPATTGQGLKLEINENGPTNESQSITGWKKIVSERRK 533

Query: 569 LISSETSMRKTTIKLSIALEKKAKAEELLAKLEEEEMLRQPEIDKEGITVEERYMLKKVG 628
           L+SSETSMRKT+IKLSIALEKKAKAEE LAKLEEEE L+QPEIDKEGITVEERYMLKKVG
Sbjct: 534 LMSSETSMRKTSIKLSIALEKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKKVG 593

Query: 629 LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSSKTVHDIARTLEAESGGILV 688
           LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERS KTVHD+ARTLEAESGGILV
Sbjct: 594 LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGILV 653

Query: 689 AVERVNRSYAIIIYRGKNYKRPSRLRPETLLNKKEALKRSIEEQRRKSLKLHVLKLTQNV 748
           AVERV RS+AIII+RGKNYKRPSRLRPE+LLNKKEALKRSIE QRRKSLKLHVLKLTQNV
Sbjct: 654 AVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSLKLHVLKLTQNV 713

Query: 749 KELKLQLDKDKKAIGMESIKKSTFQQGKEGTNEIQTAGSLKLDTDPACLSHAEDNACLEE 808
           +ELKL+LD+DK+AIGMESIK STFQQGKEG +EIQT GSLKL  D ACL+HAE++ CLEE
Sbjct: 714 EELKLKLDEDKRAIGMESIKTSTFQQGKEGIDEIQTTGSLKLVADSACLTHAENSTCLEE 773

Query: 809 NEVAMVKGGNAAHTSGTVCLETSINSLQATQRDSDTFLTSDGDQTNAELKSSSEPVGQGN 868
           NEVA VK G+  H+SGT+CL+TS+N LQ T   +D FL  +GDQ+NA ++ S E V QGN
Sbjct: 774 NEVAKVKKGHGTHSSGTICLDTSVNRLQTT---NDVFLIHNGDQSNATVRPSFESVRQGN 833

Query: 869 HTKVSMAENAAFGSFEPLSVANCLSGENNSGTSDAVHLIALNKKMKPSVRLEEEKLAMRM 928
           H KV M  NA FG+ EP S AN LSGE+NSGTSDAVH +A+NK  KPSVRLEEEK     
Sbjct: 834 HAKVPMDTNAEFGTIEPQSGANSLSGESNSGTSDAVHHVAMNKDTKPSVRLEEEK----- 893

Query: 929 NQXMWMNQPGQIPARAPQLSNKERLLLXMRMNQPGQIPARAPQLSNKERLLLRRQALKMK 988
                                   LL   R+NQPG  PA  PQLSNKERLLLRRQALKMK
Sbjct: 894 ---------------------SPPLLSSTRINQPGYFPANVPQLSNKERLLLRRQALKMK 929

Query: 989 KRPVLA 995
           K PVL+
Sbjct: 954 KLPVLS 929

BLAST of Cp4.1LG03g07840 vs. NCBI nr
Match: gi|659085530|ref|XP_008443468.1| (PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 1355.9 bits (3508), Expect = 0.0e+00
Identity = 716/906 (79.03%), Postives = 786/906 (86.75%), Query Frame = 1

Query: 89  LPNQLXQRIADKLRSLGFTEQPPEPVSDPNAPSTPGEIFVPLPNQLPKYRVGHTIDSSWS 148
           LP    QRIADKLRSLGFTE PPEP+ DPN+PS PG IFVPLPNQLPKYRVGHTIDSSWS
Sbjct: 54  LPKSAIQRIADKLRSLGFTESPPEPLPDPNSPSAPGAIFVPLPNQLPKYRVGHTIDSSWS 113

Query: 149 TPENPVPEPGTGSAIKRFHIMRDELEKRKREDGVKQRKREERAPTLAELSLPEEELRRLQ 208
           TPENPVPEPGTG+AIK+FH +R E++KRK+ DG++++KREERAP+LAEL+L EEEL RL+
Sbjct: 114 TPENPVPEPGTGTAIKKFHELRGEVQKRKKGDGIREKKREERAPSLAELNLTEEELARLR 173

Query: 209 GIGIRLKRKLKIGKAGVTEGIVNTIHEQWRRSEVVKIVCEDLCRLNMKRTHDLLERKTGG 268
            IGIRLK+KL +GKAG+TEGIVN+IHE WRRSEVVKI CEDLCR NMKRTHDLLERKTGG
Sbjct: 174 TIGIRLKKKLNVGKAGITEGIVNSIHEHWRRSEVVKIACEDLCRFNMKRTHDLLERKTGG 233

Query: 269 IVVWRSGSKIILYRGPNYVYPYFSDEILKHDASQGALLDSHSDDDGGNSETESTLSSIND 328
           IVVWRSGSKI+LYRGP Y+YPYFS EILK++ASQ AL DSHSDD+G NS+TESTLS  ND
Sbjct: 234 IVVWRSGSKIVLYRGPKYIYPYFSHEILKNEASQDALPDSHSDDEG-NSKTESTLSCNND 293

Query: 329 EKSAEPTSSDKLAGGTLIQGVGAPNKVRFELPGEAELAEDAESLLEGLGPRFSDWWGYDP 388
           E+SA PTSS K+   TLIQGVGAPN+VRF+LPGEAEL+EDAESLLEGLGPRFSDWWGYDP
Sbjct: 294 ERSAGPTSSVKMPSPTLIQGVGAPNRVRFQLPGEAELSEDAESLLEGLGPRFSDWWGYDP 353

Query: 389 LPVDADLLPAVVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNRNLQGL 448
           LPVDADLLPA+VPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNR LQGL
Sbjct: 354 LPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLSRPLPCHFALGRNRKLQGL 413

Query: 449 AASIIKLWEKCEIAKIAVKRGVQNTNSVLMAEELQLLTGGTLLSRDREFIVFYRGKDFLP 508
           AASII+LWEKCE+AKIAVKRGVQNTNS LMAEELQLLTGGTLLSRDREFIV YRGKDFLP
Sbjct: 414 AASIIQLWEKCEVAKIAVKRGVQNTNSELMAEELQLLTGGTLLSRDREFIVLYRGKDFLP 473

Query: 509 FAVSSAIEQQRYIRLQKMKQMDNALSTTVQEKKLEINERGPTNGSQSITEWKRVVSEQRK 568
           FAVSSA+EQQR++RL +MKQ D    T  Q  KLEINE GPTN SQSITE K++VSE+RK
Sbjct: 474 FAVSSAMEQQRHMRLHEMKQTD----TMGQGLKLEINENGPTNESQSITERKKMVSERRK 533

Query: 569 LISSETSMRKTTIKLSIALEKKAKAEELLAKLEEEEMLRQPEIDKEGITVEERYMLKKVG 628
           L+SSETSMRKT+IKLS+ALEKKAKAEE+LAKLEEEE L+QPEIDKEGITVEERYMLKKVG
Sbjct: 534 LMSSETSMRKTSIKLSVALEKKAKAEEILAKLEEEEKLQQPEIDKEGITVEERYMLKKVG 593

Query: 629 LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSSKTVHDIARTLEAESGGILV 688
           LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERS KTVHD+ARTLEAESGGILV
Sbjct: 594 LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGILV 653

Query: 689 AVERVNRSYAIIIYRGKNYKRPSRLRPETLLNKKEALKRSIEEQRRKSLKLHVLKLTQNV 748
           AVERVNRS+AIIIYRGKNYKRPSRLRPE+LLNKKEALKRS+E QRRKSLKLHVLKLTQNV
Sbjct: 654 AVERVNRSFAIIIYRGKNYKRPSRLRPESLLNKKEALKRSMEAQRRKSLKLHVLKLTQNV 713

Query: 749 KELKLQLDKDKKAIGMESIKKSTFQQGKEGTNEIQTAGSLKLDTDPACLSHAEDNACLEE 808
           +ELKL+LD+DK+AIGMES K STFQQGKEG +EIQT GSLKL  D ACLSHAEDN CLEE
Sbjct: 714 EELKLKLDEDKRAIGMESKKTSTFQQGKEGIDEIQTTGSLKLVADSACLSHAEDNTCLEE 773

Query: 809 NEVAMVKGGNAAHTSGTVCLETSINSLQATQRDSDTFLTSDGDQTNAELKSSSEPVGQGN 868
           +EVA VK G+  H+SGT+CL+TS+NSLQAT   +D F   +GDQ+NA  + S E V QGN
Sbjct: 774 DEVAKVKRGHGTHSSGTMCLDTSVNSLQAT---NDVFFIHNGDQSNATARPSFESVRQGN 833

Query: 869 HTKVSMAENAAFGSFEPLSVANCLSGENNSGTSDAVHLIALNKKMKPSVRLEEEKLAMRM 928
           H KV M   A FG+ EP S AN LSG+NNSGTSDAVH +ALN+  KPSVRLEEEK     
Sbjct: 834 HAKVPMDTTAEFGTIEPQSGANSLSGKNNSGTSDAVHHVALNEDTKPSVRLEEEK----- 893

Query: 929 NQXMWMNQPGQIPARAPQLSNKERLLLXMRMNQPGQIPARAPQLSNKERLLLRRQALKMK 988
                                   LL  MR+NQPG +PA APQLSNKERLLLRRQALKMK
Sbjct: 894 ---------------------SPPLLSSMRINQPGYLPASAPQLSNKERLLLRRQALKMK 925

Query: 989 KRPVLA 995
           KRPVLA
Sbjct: 954 KRPVLA 925

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CFM2_ARATH6.9e-26251.69CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana GN=CFM2... [more]
CFM3_ORYSJ5.0e-12736.71CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa s... [more]
CFM3_MAIZE1.0e-12438.91CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays GN=CF... [more]
CFM3A_ARATH1.1e-12340.55CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis t... [more]
CFM3B_ARATH2.6e-10739.20CRM-domain containing factor CFM3B, chloroplastic OS=Arabidopsis thaliana GN=CFM... [more]
Match NameE-valueIdentityDescription
A0A0A0LC83_CUCSA0.0e+0078.39Uncharacterized protein OS=Cucumis sativus GN=Csa_3G829150 PE=4 SV=1[more]
F6HV32_VITVI3.9e-28857.25Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g01910 PE=4 SV=... [more]
A0A061ED06_THECC1.5e-28756.60CRM family member 2, putative isoform 2 OS=Theobroma cacao GN=TCM_016808 PE=4 SV... [more]
M0ZLU8_SOLTU1.4e-28554.96Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001391 PE=4 SV=1[more]
K4BBN2_SOLLC7.7e-28455.41Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G01370.13.9e-26351.69 CRM family member 2[more]
AT3G18390.17.7e-12639.18 CRS1 / YhbY (CRM) domain-containing protein[more]
AT3G23070.16.5e-12540.55 CRM family member 3A[more]
AT4G29750.15.3e-11942.34 CRS1 / YhbY (CRM) domain-containing protein[more]
AT4G14510.11.5e-10839.20 CRM family member 3B[more]
Match NameE-valueIdentityDescription
gi|659085528|ref|XP_008443467.1|0.0e+0079.76PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplast... [more]
gi|449459492|ref|XP_004147480.1|0.0e+0079.58PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplast... [more]
gi|700204492|gb|KGN59625.1|0.0e+0078.39hypothetical protein Csa_3G829150 [Cucumis sativus][more]
gi|778685702|ref|XP_011652259.1|0.0e+0079.14PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplast... [more]
gi|659085530|ref|XP_008443468.1|0.0e+0079.03PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplast... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR001890RNA-binding_CRM
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0000375 RNA splicing, via transesterification reactions
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g07840.1Cp4.1LG03g07840.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001890RNA-binding, CRM domainPRODOMPD010559coord: 208..289
score: 9.
IPR001890RNA-binding, CRM domainGENE3DG3DSA:3.30.110.60coord: 417..509
score: 9.9E-27coord: 616..713
score: 1.1E-21coord: 971..1066
score: 6.6E-21coord: 198..289
score: 8.6
IPR001890RNA-binding, CRM domainPFAMPF01985CRS1_YhbYcoord: 418..502
score: 5.3E-18coord: 972..1058
score: 1.6E-13coord: 199..282
score: 1.0E-30coord: 617..703
score: 1.7
IPR001890RNA-binding, CRM domainSMARTSM01103CRS1_YhbY_2coord: 199..282
score: 4.5E-25coord: 418..502
score: 1.2E-11coord: 972..1058
score: 2.0E-16coord: 616..703
score: 1.0
IPR001890RNA-binding, CRM domainPROFILEPS51295CRMcoord: 416..513
score: 16.468coord: 197..293
score: 21.563coord: 614..714
score: 19.42coord: 970..1069
score: 16
IPR001890RNA-binding, CRM domainunknownSSF75471YhbY-likecoord: 616..713
score: 1.7E-21coord: 418..510
score: 9.68E-19coord: 971..1065
score: 5.1E-18coord: 198..291
score: 4.05
NoneNo IPR availableunknownCoilCoilcoord: 734..761
score: -coord: 583..606
scor
NoneNo IPR availablePANTHERPTHR31846FAMILY NOT NAMEDcoord: 98..793
score:
NoneNo IPR availablePANTHERPTHR31846:SF12RNA-BINDING PROTEIN YHBYcoord: 98..793
score:

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g07840Cucumber (Chinese Long) v3cpecucB0738
Cp4.1LG03g07840Cucumber (Chinese Long) v3cpecucB0740
Cp4.1LG03g07840Wax gourdcpewgoB0824
Cp4.1LG03g07840Cucurbita pepo (Zucchini)cpecpeB218
Cp4.1LG03g07840Cucumber (Gy14) v1cgycpeB0204
Cp4.1LG03g07840Wild cucumber (PI 183967)cpecpiB596
Cp4.1LG03g07840Cucumber (Chinese Long) v2cpecuB595
Cp4.1LG03g07840Cucumber (Gy14) v2cgybcpeB105
Cp4.1LG03g07840Cucumber (Gy14) v2cgybcpeB108
Cp4.1LG03g07840Melon (DHL92) v3.6.1cpemedB670
Cp4.1LG03g07840Silver-seed gourdcarcpeB0378
Cp4.1LG03g07840Silver-seed gourdcarcpeB0512